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Reimagining Academic Performance Management in the Age of AI 在人工智能时代重塑学术绩效管理
Pub Date : 2024-07-04 DOI: 10.3897/aca.7.e129562
Richard Dare
The university’s initial response to the spectre of artificial intelligence nullifying the efficacy of traditional academic performance assessments may present us with, if the reader will indulge an old chestnut, a case of ‘c’est vouloir prendre des li`evres au son du tambour’. That is to say, the unexpected 2022 arrival of ChatGPT (to say nothing of the progeny rapidly evolving AI systems will likely spawn next) is at this very moment spreading like an intellectual pandemic – whether professors wish to acknowledge its presence or not. As a community dedicated to thoughtful education, this new technology compels us to choose between three entirely distinct strategies: Ignore the impact of large language models on learning and assessment altogether and watch our students’ skills erode – the default non-response if we fail to act; or Fight against the inevitable incursion of cut-and-paste technologies such as ChatGPT by categorising them as forms of plagiarism, banning their use in academia, and trying to identify their offspring so we can apply largely feckless punishments as imagined remedies; or Embrace the new technologies and harness them in ways that radically recast core international educational and assessment practises, making them more suitable for the world in which we actually live. Ignore the impact of large language models on learning and assessment altogether and watch our students’ skills erode – the default non-response if we fail to act; or Fight against the inevitable incursion of cut-and-paste technologies such as ChatGPT by categorising them as forms of plagiarism, banning their use in academia, and trying to identify their offspring so we can apply largely feckless punishments as imagined remedies; or Embrace the new technologies and harness them in ways that radically recast core international educational and assessment practises, making them more suitable for the world in which we actually live. This paper imagines just such a third way. By contextualising technological advances as useful tools that can decolonise ailing education systems, the author imagines new evidence-based teaching and assessment strategies that can challenge students to achieve higher academic standards, making higher education increasingly impactful on the real world. The opportunity, this paper argues, is for international educational systems to ‘go beyond the unknown to meet the known’.
对于人工智能使传统学业成绩评估失效的幽灵,大学的最初反应可能是 "c'est vouloir prendre des li`evres au son du tambour"。也就是说,ChatGPT 在 2022 年的不期而至(更不用说迅速发展的人工智能系统接下来可能催生的后代),此刻正像一场知识界的大流行病一样蔓延开来--无论教授们是否愿意承认它的存在。 作为一个致力于思想教育的群体,这项新技术迫使我们在三种完全不同的策略中做出选择: 完全忽视大型语言模型对学习和评估的影响,眼睁睁地看着学生的技能受到侵蚀--如果我们不采取行动,这就是默认的无奈之举;或者通过将 ChatGPT 等剪切粘贴技术归类为剽窃形式、禁止在学术界使用这些技术并试图找出它们的后代来抵御它们不可避免的入侵,这样我们就可以将基本无用的惩罚作为想象中的补救措施;或拥抱新技术,利用新技术从根本上改变国际教育和评估的核心做法,使其更适合我们实际生活的世界。 完全忽视大型语言模型对学习和评估的影响,眼睁睁地看着我们学生的技能受到侵蚀--如果我们不采取行动,就只能采取默认的非应对措施;或者通过将 ChatGPT 等剪切粘贴技术归类为剽窃形式、禁止在学术界使用这些技术并试图识别其后代来抵御它们不可避免的入侵,这样我们就可以将基本无用的惩罚作为想象中的补救措施;或者,拥抱新技术,利用新技术从根本上改变国际教育和评估的核心做法,使其更适合我们实际生活的世界。 本文设想的正是这样的第三种方式。 作者将技术进步视为有用的工具,可以使病入膏肓的教育系统去殖民化,从而想象出新的循证教学和评估策略,可以挑战学生达到更高的学术标准,使高等教育对现实世界产生越来越大的影响。 本文认为,国际教育体系面临着 "超越未知,迎接已知 "的机遇。
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引用次数: 0
Influence of Majority Expatriate National Cultures on the Organizational Culture in the UAE Healthcare Sector 外籍人员占多数的国家文化对阿联酋医疗保健行业组织文化的影响
Pub Date : 2024-07-04 DOI: 10.3897/aca.7.e129721
Jophy Devasia
Organizational culture is understood to emanate from the management philosophy & leadership vision, along with workforce national culture, individual member’s background, beliefs, aspirations, perceptions & external interactions (Žarkić-Joksimović and Marinković 2018). The workforce composition seen across the Middle East presents a unique scenario deviating from the assumption of a singular core national culture in organizations. Figures available on the public domain indicate 99% expatriate employment in UAE private sector (Kapiszewski 2004) bringing about an amalgamation of cultural traits. The researcher, an HR practitioner, has made observations that expat national groups tend to respond differently on organizational stimuli, leading to investigation of nationality-based affiliation among workforce as well as existence of parallel cultural groups within the organization, focusing on healthcare sector. The research objectives are to review if majority expat national groups deviate from established country specific identifiers, the assessment of majority group behaviour on organizational cultural markers, review of the moderating effect of expat tenure & professional identity on the national cultural values, and to review whether large organizations in the UAE succeed in maintaining a unique organizational cultural identity across facilities, irrespective of employing varied expatriate majorities. Hofstede's Culture Onion Model (Hofstede and Hofstede 2005) is assumed as the base for investigating the research problem. This model ties together the concepts of National & Organizational Culture by linking the Cultural Dimensions Theory (Hofstede 1980) & the Multi-Focus Model on Organizational Culture (Hofstede 1997). Following a quantitative research design undertaken as a cross-sectional study, data collected is analysed for causal relationships. An adapted questionnaire is used, merging the elements of Hofstede's Values Survey Module (Hofstede and Minkov 2013) & the organizational cultural values questionnaire (Hofstede et al. 1990). A pilot study testing internal validity & reliability of the survey tool returned a score of 0.736 establishing acceptable range of internal consistency. The target population of around 2400 employees are considered from two tertiary care hospitals in Abu Dhabi, with different majority expat nationality mix. Sample size of 331 at 95% confidence is assumed using the Krejcie & Morgan table (Krejcie and Morgan 1970). Probability sampling is used to select the sample, with stratified random sampling method to ensure nationality representation proportional to the percentage strength in target population. Survey data generated an aggregate reliability score of 0.836. Hypotheses testing is performed & results further substantiated using Hofstede’s formulae for national cultural dimensions (Hofstede and Minkov 2013). A follow-up study on an independent sample from an acquired business of the entity, is conducted to exal
人才流动性的增加导致全球混合国籍员工人数激增。虽然现有文献似乎缺乏对这种劳动力变化所带来的文化失衡的深入研究,但目前的研究提供了一个独特的视角,即特定国籍的文化特征如何影响组织环境中的劳动力群体行为。
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引用次数: 0
"Uncertainty and fragility, I love you" artists' words "不确定性和脆弱性,我爱你 "艺术家的话
Pub Date : 2024-07-04 DOI: 10.3897/aca.7.e129234
Stephane Ginocchio
"We are leaving the risk society to enter the society of shocks, ruptures and catastrophes, systemic phenomena". As early as the 5th century BC, the recognition of Volatility, Uncertainty, Complexity and Ambiguity (a VUCA world) served as a paradigm guiding the governance of the Chinese Emperors. What has changed since then is the speed at which progress accelerates, and the ability to adapt to it. Today, the organization of work aims to reduce time to immediate results that the market or technology will disrupt. In an ever-changing world, to remain competitive and attractive, companies must constantly reinvent themselves and adapt at breakneck speed, learning to play the balancing act like real acrobats in the face of paradoxical demands (Panczuk and Point 2008). In The Innovator's Dilemma, Christensen and Raynor (2003) asks: Why do well-managed companies fail? His conclusion is that they often fail because the management practices that have enabled them to become industry leaders also make it extremely difficult to innovate and develop the disruptive behaviors that ultimately lose them their markets in a volatile and fragile world. For an organization, the question is how to reinforce its anti-fragility. The crises we have experienced have made us aware of our vulnerability, and have shown us that we need to keep readjusting in order to make anti-fragility our own. But referring back to our pre-VUCA experiences, we believe that it's simply a matter of trusting our intelligence to learn how to overcome obstacles and make these paths practicable by harnessing a capacity for individual resilience capable of building a path of collective intelligence in the face of the storms of a VUCA world. By adopting an attitude of calculated risk-taking, a culture of resilience and using disruption to innovate (Frimousse and Peretti 2021), companies believe they can become stronger and more resilient in the face of future challenges, i.e. survive shocks and quickly return to their previous state (Cyrulnik and Jorland 2012). And yet, we find that, conversely, the more mature, multifaceted and successful a company becomes, the more complicated it becomes for employees to engage collectively in innovation. So how can neuroscience enlighten managers to build the anti-fragility necessary for survival in a VUCA business world? We will demonstrate: That it is inevitable that companies will be unable to manage uncertainty if they rely solely on human rationality, It's the very workings of our brains that mislead us (Kahneman et al. 1991). Our rationality has been challenged by neuroscientists studying decision-making, who have focused on the biases affecting our choices (Sacre 2018). There is therefore a significant risk that our prediction, based on biased information or reasoning, will not come true, and that the strategy will collapse like a house of cards. That by conforming to this approach, we necessarily experience the unpredictability of the business as a s
"我们正在离开风险社会,进入冲击、破裂和灾难、系统性现象的社会"。早在公元前 5 世纪,对 "波动性、不确定性、复杂性和模糊性"(VUCA 世界)的认识就已成为指导中国皇帝施政的范式。从那时起,变化的是进步的速度和适应进步的能力。如今,工作安排的目标是缩短时间,立即取得市场或技术会颠覆的成果。在瞬息万变的世界里,企业要保持竞争力和吸引力,就必须不断重塑自我,以极快的速度进行适应,学会像真正的杂技演员一样,在矛盾的需求面前扮演平衡的角色(Panczuk 和 Point,2008 年)。克里斯坦森和雷诺(2003 年)在《创新者的窘境》中问道:"为什么管理良好的公司会失败?为什么管理良好的公司会失败?他的结论是,这些公司之所以失败,往往是因为使它们能够成为行业领导者的管理实践也使它们极难进行创新和发展颠覆性行为,而这些行为最终会使它们在这个动荡而脆弱的世界中失去市场。对于一个组织来说,问题在于如何加强其反脆弱性。我们所经历的危机让我们意识到了自身的脆弱性,也让我们明白,我们需要不断重新调整,才能将反脆弱性变成我们自己的东西。但是,回溯到我们在 "非传统和创造性 "之前的经历,我们相信,这只是一个相信我们的智慧的问题,我们要学会如何克服障碍,并通过利用个人的恢复能力,使这些道路切实可行,从而能够在面对 "非传统和创造性 "世界的风暴时,建立起一条集体智慧之路。通过采取精打细算的冒险态度、复原力文化和利用破坏进行创新(Frimousse 和 Peretti,2021 年),企业相信它们在面对未来挑战时可以变得更强大、更有韧性,即在冲击中幸存下来并迅速恢复到以前的状态(Cyrulnik 和 Jorland,2012 年)。然而,我们发现,相反地,公司越成熟、越多元、越成功,员工集体参与创新就越复杂。那么,神经科学如何启发管理者建立在 VUCA 商业世界中生存所需的反脆弱性呢?我们将证明如果企业仅仅依靠人类的理性,就无法管理不确定性,这是不可避免的,我们大脑的运作本身就会误导我们(卡尼曼等人,1991 年)。我们的理性受到了研究决策的神经科学家的挑战,他们关注影响我们选择的偏差(Sacre,2018 年)。因此,我们根据有偏差的信息或推理做出的预测很有可能不会成真,战略也会像纸牌搭的房子一样倒塌。顺应这种方法,我们必然会体验到企业的不可预测性是不安全感的来源。脆弱的企业需要高度详细的预测方法,而反过来,预测系统也会带来脆弱性(塔勒布,2011 年),在 VUCA 世界中寻找解决方案的矛盾过程中产生的焦虑,由所产生的不安全感自我滋养,机械地限制了创新能力(布罗肖特等人,2018 年),而这正是最初所寻求的复原力的条件之一(图 1)。因此,企业别无选择,只能改变心态,走向反脆弱。我们需要摆脱对事件和自然的控制幻觉,加强对风险的承受能力。我们面临的挑战是如何创造必要的条件,让员工能够在不感到危险的情况下将自己投射到不适的环境中。我们的脆弱性如果不加以引导,就会使我们在 BANI 世界中陷入焦虑,但如果加以认识和利用,就会成为 VUCA 世界中的一种力量。脆弱是通往创造和怀疑的道路(图 2)。它让我们不断质疑自己,从而保持创新。因此,问题不在于学习什么,而在于如何向集体灌输转型的学徒精神,以应对 VUCA 世界的挑战。这是一个接受信息的问题,当不确定现象到来时,信息还不存在(Silberzahan,2017 年)。可能性的开放源于对不可能的接受。"我之所以是我,并不是因为我是世界的一个项目;而是因为我欢迎和忍受事件的方式,以及我被事件置于深渊的方式,使我存在于碎片化的瞬间(可转移性概念)(Runel,2012 年)。企业也需要使用神经科学方法来整合这一新的文化范式。VUCA 世界中的管理无疑与人类息息相关。我们可能希望改变,但却发现很难放下我们的行为......
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引用次数: 0
A study on the Malaysian Education system’s Employability skills 马来西亚教育系统就业技能研究
Pub Date : 2024-07-04 DOI: 10.3897/aca.7.e130049
Gandhimathi Krishnappan
Introduction Malaysia has always struggled with graduate unemployment. Department of Statistics (2023) reports that 71.9% of graduate students are awaiting employment opportunities six months after graduation as of Dec 2022. Basir et al. (2022) says, that employability remains a major concern for all stakeholders, including graduates, higher education providers, industry representatives, and policymakers. He also, says that according to Economic Outlook 2021 of Malaysia, the unemployment rate among graduates has remained stable from 2001 to 2019, with fluctuations ranging from 3.1% to 4.0%. In February 2020, Malaysia had a 3.3% unemployment rate, slightly higher than the previous month's 3.2% Department of Statistics Malaysia (2020, cited in Basir et al. (2022)) Significance / Rational of the Study The acquisition of non-technical skills holds immense significance in augmenting the employability prowess of post-millennial graduate students. The current cohort of students demonstrates high levels of engagement and attachment to various social media and online platforms. Consequently, this phenomenon bears consequences for the development of their non-technical skills in a dynamic work setting. The present research seeks to address the existing gaps in previous studies while simultaneously bolstering the current body of knowledge by assimilating the alterations observed in the contemporary educational landscape and the advancements in information and communication technology. The findings of this study will serve as valuable input for policymakers, students, and educators alike, as they work towards enhancing the incorporation of non-technical skills into the existing curriculum. Study Objective Do cognitive skills, and Socio communication skills increase the employability of graduate students? Are graduates aware of the soft skills required for employability? Do the graduate students fulfil employability skills as perceived by employers and Human capital consultants? Do cognitive skills, and Socio communication skills increase the employability of graduate students? Are graduates aware of the soft skills required for employability? Do the graduate students fulfil employability skills as perceived by employers and Human capital consultants? Research Question Are students ready to embark on their journey in the Human Capital market with the required Skills and Competency? Hypothesis H1 A relationship exists between Social Communication skills and Graduate Employability. H0 There is no relationship between Social Communication skills and Graduate Employability. Research Methodology A mixed-method approach with a Convergent Parallel design as depicted below shall be used. The research process can be symbolized as qualitative and quantitative QUAL+QUAN Morse (1991, as cited in Demir and Pismek (2018)). A convergent parallel design involves the simultaneous execution of quantitative and qual
经济合作与发展组织最近开展的研究概述了教育机构与行业之间可以建立的主要合作形式。首先,社会合作伙伴可以在教育机构的管理中发挥正式作用。其次,雇主可以与教师一起,积极参与制定和评估教育课程,以确保符合劳动力市场的需求。第三,以工作为基础的学习通常是与社会伙伴合作制定的,可以将其纳入课程。 这项研究将有助于毕业生和教育工作者更加重视企业所需的技能,同时改变企业对在后科维德时代求职的应届毕业生的期望。
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引用次数: 0
Investigating the Impact of Green R&D, Transformational Leadership, and Cross-Cultural Approaches on Performance Management in the Manufacturing Sector 调查绿色研发、变革型领导力和跨文化方法对制造业绩效管理的影响
Pub Date : 2024-07-04 DOI: 10.3897/aca.7.e129588
Abdullah Hemmet
In the present era, environmental sustainability is a transformative concept that is rapidly penetrating all facets of our lives and professional environments. Belgium focuses on environmental sustainability offers a wide range of green initiatives to sustain its environmental performance. However, the previous research has failed to determine the extent to which Green R & D Investment, Green Transformational Leadership, Green Cross Culture perspective impact the Belgium manufacturing organizations. The main rationale for performing this research was to determine the above green initiative's impact on the Belgium manufacturing organization. For this, a mixed-method approach has been utilized. Data from 254 respondents have been collected. This data was further analyzed through the analyzed the SPSS to perform the quantitative analysis. The results of the quantitative analysis show the Green R & D Investment. Green Transformational Leadership significantly influence green performance management (GPM) since its significance value is less than 0.5. At the same time, the Green Cross Culture Perspective does not pose any impact on GPM since it has a p-value of 0.48. On the other hand, qualitative data was gathered through the focus group interviews. Nine managers have been included in to focus group interview. In the focus group interview, managers depict the all the considered initiatives are vital for their green sustainability. However, green cross-cultural perceptive strategies should be enhanced more and consider both collectivism, and individualism elements for green sustainability. In spite of positive research results, this research also implies that the manufacturing organization in Belgium need to continuously change R&D investment strategies, focus on leader tanning, and increase employee engagement to ensure the successful implementation of green performance management.
在当今时代,环境可持续性是一个变革性的概念,正在迅速渗透到我们生活和职业环境的方方面面。比利时注重环境的可持续发展,提出了一系列绿色倡议,以保持其环境绩效。然而,以往的研究未能确定绿色研发投资、绿色转型领导力、绿色跨文化视角对比利时制造企业的影响程度。本研究的主要目的是确定上述绿色倡议对比利时制造企业的影响。为此,我们采用了混合方法。研究收集了 254 名受访者的数据。通过分析 SPSS 对这些数据进行了进一步的定量分析。定量分析的结果表明,绿色研发投资、绿色变革型领导力、绿色变革型领导力和绿色变革型领导力对绿色研发投资和绿色变革型领导力有显著影响。绿色变革型领导对绿色绩效管理(GPM)有明显影响,因为其显著值小于 0.5。同时,绿色跨文化视角对 GPM 没有任何影响,因为其 p 值为 0.48。另一方面,定性数据是通过焦点小组访谈收集的。九名管理人员参加了焦点小组访谈。在焦点小组访谈中,经理们认为所有考虑到的措施对于他们的绿色可持续发展都至关重要。然而,绿色跨文化感知战略应得到进一步加强,并同时考虑集体主义和个人主义因素,以实现绿色可持续发展。尽管取得了积极的研究成果,但本研究还表明,比利时的制造企业需要不断改变研发投资策略,关注领导者的鞣制,并提高员工的参与度,以确保绿色绩效管理的成功实施。
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引用次数: 0
Neuropedagogy in Higher Education 高等教育中的神经教育学
Pub Date : 2024-07-04 DOI: 10.3897/aca.7.e129736
Anthony Moss-Zobel
The convergence of neuroscience and pedagogy, known as neuroeducation, has sparked significant interest in the field of education since US President George Bush declared the 1990s to be ’The Decade of the Brain'. The purpose of this study is to look into worldwide higher education educators' and administrators' opinions, needs, and potential performance consequences for neuroeducation. The study goes into the complex link between neuroscience research and educational practices. The education community is keen to acquire the neuroscience findings transfer into neuro-methodologies and neuro-didactics that promises to improve learning outcomes. There are several challenges that the education community must be mindful of in pursuing effective evidence-based practices. One is neuromyths, which are misrepresentations or misunderstandings about scientific findings. Second, having a common language that educators, parents, administrators, and policymakers can use to discuss neuroeducation in a meaningful way is necessary. Several keywords are used interchangably such as; neuroeducation, neuropedagogy, educational neuroscience among others which can be confusing. Third, policy decisions must be made based on clear goals and grounded in evidence. Lots of resources are wasted on prescriptive methods that have no connection to any sound research. Fourth, There is evidence of strong interest in how the brain learns and processes information which means that access to evidence-based research findings must be accessible to help decrease misleading and misinformation. Fragkaki et al. 2022 However, the growing interest in the education–brain relationship does not match the proper use of research findings. The research questions attempt to provide answers to the perspectives on neuroeducation and understand the interest and awareness of neuro-methodologies and neuro-didactics in the higher education community. Objectives: 1. Perception Analysis: The goal is to identify and analyze worldwide perceptions of neuroeducation among higher education educators, with an emphasis on understanding how these perceptions influence teaching approaches. 2. Performance-Oriented Training Needs: To investigate the perceived training needs and wants of higher education instructors and administrators in terms of neuroeducation-based strategies for improving performance outcomes, such as engagement and commitment. 3. Neuromyth Impact: This study will look into the knowledge and prevalence of neuromyths among educators, as well as their possible impact on performance-oriented pedagogical practices. Methodology: This study takes a mixed-methods approach, including surveys with Likert scale questions disseminated between May and December 2023. The questionnaire covers five major performance-related areas: communication and emotions, concentration and engagement, didactic methodologies, creativity and critical thinking, and neuroscience and neuropedagogy. Quantitative da
自美国总统乔治-布什宣布 20 世纪 90 年代为 "大脑十年 "以来,神经科学与教学法的融合,即所谓的神经教育,在教育领域引发了极大的兴趣。本研究的目的是调查全球高等教育教育者和管理者对神经教育的看法、需求和潜在的绩效后果。本研究深入探讨了神经科学研究与教育实践之间的复杂联系。教育界热衷于将神经科学研究成果转化为神经方法学和神经教学法,以改善学习效果。教育界在追求有效的循证实践时必须注意几个挑战。其一是神经迷思,即对科学发现的歪曲或误解。其次,教育工作者、家长、管理者和政策制定者有必要使用一种共同的语言来有意义地讨论神经教育。神经教育、神经教育学、教育神经科学等几个关键词被交替使用,可能会造成混淆。第三,决策必须基于明确的目标和证据。大量资源被浪费在与任何可靠研究无关的指令性方法上。第四,有证据表明,人们对大脑如何学习和处理信息有着浓厚的兴趣,这意味着必须提供以证据为基础的研究成果,以帮助减少误导和错误信息。Fragkaki et al. 2022 然而,人们对教育与大脑关系的兴趣与日俱增,却与研究成果的正确使用不相匹配。这些研究问题试图为神经教育的观点提供答案,并了解高等教育界对神经方法学和神经教学法的兴趣和认识。 研究目标 1.认知分析:目标是确定和分析全世界高等教育工作者对神经教育的看法,重点是了解这些看法如何影响教学方法。2.以绩效为导向的培训需求:调查高等教育教师和管理人员对基于神经教育的培训需求和愿望,以提高绩效成果,如参与度和投入度。3.神经肌肉的影响:本研究将调查教育工作者对神经迷思的了解和普遍程度,以及神经迷思对以绩效为导向的教学实践可能产生的影响。 研究方法: 本研究采用混合方法,包括在 2023 年 5 月至 12 月期间分发的带有李克特量表问题的调查问卷。问卷涉及五个与成绩相关的主要领域:交流与情感、专注与参与、教学方法、创造力与批判性思维以及神经科学与神经教育学。将使用统计工具对定量数据进行分析,重点关注神经教育认知与成绩结果之间的潜在关系。专题调查将用于定性数据,重点是对提高成绩至关重要的方面。 未来研究: 这一发现为未来基于成绩的神经教育研究指明了方向。以下研究可能会调查基于神经教育的培训计划在提高特定绩效指标方面的功效。纵向研究可以监测神经教育对教员绩效相关实践的长期影响,为持续发展提供重要启示。此外,调查错误信息和虚假信息对教育者决策过程的影响,以及由此对绩效的影响,也是未来研究的一条可行之路。本研究为神经教育的学术研究添砖加瓦,同时也为提高教师绩效提供了实用的见解,使高等教育机构和学生都能从中受益。
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引用次数: 0
Groundwater Diversity across New Zealand: From micro to macro-scale 新西兰地下水多样性:从微观到宏观
Pub Date : 2023-10-23 DOI: 10.3897/aca.6.e108433
Louise Weaver, Judith Webber, Phil Abraham, Annette Bolton, Panan Sitthirit, Murray Close
Groundwater is home to a diverse range of organisms, both small and large, which form a complex ecosystem that helps to purify the water and keep it flowing smoothly. However, much of the processes that occur in this ecosystem are still a mystery and there are many important services that we have yet to fully understand. Our goal is to create a groundwater health index that can be used to monitor the health of groundwater, similar to the macroinvertebrate community index used for surface water systems. We are investigating both the macroinvertebrates and microbial diversity in our research. To gather data, we are collecting groundwater environmental (e)DNA samples and biofilm samples using in-situ biofilm bags from various sites in New Zealand across multiple seasons. We then analyze the water chemistry and sequence data for bacteria, archaea, eukaryotes, and fungi to determine the status of the groundwater source. Our findings show that there is a complex diversity present in both the groundwater itself (e.g., Fig. 1) and the attached microbial biofilm. We have also discovered variations between the attached and groundwater across all sites studied, with significant differences in the Shannon richness indicator in Canterbury. Additionally, we have observed differences in microbial populations depending on the lithology and water chemistry present. Our research aims to identify key species, both micro and macro, that can potentially act as a tool for predicting the health of groundwater. Furthermore, understanding the biological processes occurring in our groundwater may lead to the discovery of beneficial organisms capable of remediation.
地下水是大大小小的各种生物的家园,它们形成了一个复杂的生态系统,有助于净化水并保持其顺畅流动。然而,在这个生态系统中发生的许多过程仍然是一个谜,我们还没有完全了解许多重要的服务。我们的目标是创建一个地下水健康指数,可以用来监测地下水的健康,类似于用于地表水系统的大型无脊椎动物群落指数。我们正在研究大型无脊椎动物和微生物的多样性。为了收集数据,我们正在收集地下水环境(e)DNA样本和生物膜样本,使用原位生物膜袋从新西兰的不同地点收集多个季节。然后,我们分析了水化学和序列数据的细菌,古细菌,真核生物和真菌,以确定地下水来源的状况。我们的研究结果表明,地下水本身(例如,图1)和附着的微生物生物膜都存在复杂的多样性。我们还发现了所有研究地点的附着物和地下水之间的差异,坎特伯雷的香农丰富度指标存在显著差异。此外,我们还观察到微生物种群的差异取决于岩性和水化学的存在。我们的研究旨在确定微观和宏观的关键物种,这些物种可能作为预测地下水健康的工具。此外,了解地下水中发生的生物过程可能会导致发现能够进行修复的有益生物。
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引用次数: 0
Pathogen survival in groundwater: Influence of redox and organic matter 地下水中病原体存活:氧化还原和有机物的影响
Pub Date : 2023-10-23 DOI: 10.3897/aca.6.e108697
Louise Weaver, Erin McGill, Panan Sitthirit, Judith Webber, Phil Abraham, Murray Close
Microbial pathogen survival within the environment can be variable and can depend on many criteria, including environmental conditions e.g. oxygen concentration, temperature, pH, sunlight, etc. (e.g., Horswell et al. (2010)). Groundwater has been shown to enable the prolonged survival of pathogenic organisms due to the absence of sunlight and relatively stable temperatures (Cook and Bolster 2007). In other studies, however, survival has been lower in groundwater when compared with a sterile environment (e.g. sterilised groundwater or artificial groundwater) due to the presence of competing organisms and adverse conditions of pH and redox. To elucidate these discrepancies two experiments were designed: The first, hypothesised that, due to Campylobacters' low tolerance to high oxygen levels, survival in oxic (dissolved oxygen (DO) levels over 5 mg per L) would be less than in anoxic groundwater (DO levels below 2 mg per L). The second hypothesised that the survival of the pathogen Salmonella typhimurium , in groundwater, will be enhanced by organic carbon. METHODS Campylobacter experiment: Campylobacter jejuni isolated from the Havelock North drinking water source was used (designated HN16) (Gilpin et al. 2020). To compare the survival of the outbreak strain with type strain Campylobacter , NCTC 11351 was used. Salmonella experiment: For this experiment, environmental isolates were used rather than laboratory strains. Salmonella, isolated from a stream in Wellington, New Zealand, was identified as Salmonella enterica serovar Typhimurium . The Escherichia coli used was a phylogroup A, isolated from stream sediment in Whangarei Falls, New Zealand. Mesocosm experiments were established containing groundwater (oxic and anoxic for Campylobacter experiment and ultrafiltered, groundwater, groundwater amended with 1% or 10% dissolved organic carbon (DOC). pH, dissolved oxygen (DO), and temperature were monitored over the experimental period. The temperature was maintained at 12-14°C during both experiments. Samples (5 mL) of the groundwater from each jar were taken aseptically at set time points over the experimental period. Samples were then serially diluted in sterile peptone water to give a dilution series from 10 -1 to 10 -4 . Samples were analysed by plating onto selective media. RESULTS Campylobacter experiment: The results presented demonstrated differences in the survival of the two Campylobacter strains tested and differences in survival of Campylobacter HN16 depending on groundwater type. Fig. 1 shows the average concentration of Campylobacter strains in groundwater types over time. The results presented are average of three replicates. Over the whole experimental period survival of Campylobacter HN16 was greatest in anoxic groundwater, and only a 1 log reduction was observed (Fig. 1), equating to a 79.6% survival after 16 days. The die-off rate of Campylobacter HN16 in anoxic groundwater was calculated to be 0.0873 days and T90 6.85 days. Salmon
微生物病原体在环境中的生存可能是可变的,并且可能取决于许多标准,包括环境条件,例如氧气浓度、温度、pH值、阳光等(例如,Horswell等人(2010))。由于缺乏阳光和相对稳定的温度,地下水已被证明能够延长病原生物的生存时间(Cook and加强,2007)。然而,在其他研究中,由于存在竞争生物以及不利的pH和氧化还原条件,与无菌环境(例如无菌地下水或人工地下水)相比,地下水中的存活率较低。为了阐明这些差异,设计了两个实验:第一个假设,由于弯曲杆菌对高氧水平的耐受性较低,在氧气(溶解氧(DO)水平超过5 mg / L)中的存活率将低于缺氧地下水(DO水平低于2 mg / L)。第二个假设,病原体鼠伤寒沙门氏菌在地下水中的存活率将被有机碳提高。方法弯曲菌实验:采用从Havelock North饮用水源分离的空肠弯曲菌(编号HN16) (Gilpin et al. 2020)。为了比较爆发菌株与弯曲杆菌型菌株的存活率,使用了NCTC 11351。沙门氏菌实验:本实验采用环境分离菌而非实验室菌株。从新西兰惠灵顿的一条溪流中分离出的沙门氏菌被鉴定为肠沙门氏菌血清型鼠伤寒沙门氏菌。使用的大肠杆菌是一个系统群a,从新西兰旺阿雷瀑布的溪流沉积物中分离出来。建立了含地下水(弯曲杆菌实验含氧和缺氧)和超滤、地下水、添加1%或10%溶解有机碳(DOC)的地下水的中生态实验。在实验期间监测pH、溶解氧(DO)和温度。两组实验温度均保持在12-14℃。在实验期间的设定时间点,从每个罐子中无菌抽取5 mL的地下水样本。然后将样品在无菌蛋白胨水中连续稀释,得到从10 -1到10 -4的稀释系列。样品通过电镀在选择性介质上进行分析。结果弯曲杆菌实验:结果显示,两种弯曲杆菌的存活率存在差异,HN16弯曲杆菌的存活率也因地下水类型的不同而存在差异。图1显示了地下水类型中弯曲杆菌菌株随时间的平均浓度。所得结果为三次重复的平均值。在整个实验期间,HN16弯曲杆菌在缺氧地下水中的存活率最高,仅下降了1 log(图1),相当于16天后的存活率为79.6%。计算出缺氧地下水中弯曲杆菌HN16的死亡时间为0.0873 d, T90为6.85 d。沙门氏菌实验:在实验过程中,当没有或低水平DOC存在时,沙门氏菌的死亡率相似(图2a)。然而,在高水平的DOC下,沙门氏菌的存活率与对照组相似。84天后,仅观察到1 Log的下降。相比之下,大肠杆菌在所有中菌群中的死亡速度都快于沙门氏菌(图2)。有趣的是,在56天后的高DOC中,大肠杆菌计数保持在每mL 103,直到实验结束。结论与意义两项实验均证实了病原菌在不同地下水条件下的生存能力。与型菌株相比,爆发菌株弯曲杆菌的变异表明物种内的变异可能导致在环境中的存活率提高。沙门氏菌实验表明,添加有机碳可以提高地下水中病原菌的存活率。此外,微生物指示物大肠杆菌和沙门氏菌之间的差异提供了微生物在环境中生存差异的证据,并表明如果依赖微生物指示物,则在考虑地下水中病原体的生存时需要谨慎。
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引用次数: 0
Non-syntrophic Methanogenic Hydrocarbon Degradation by an Archaeal Species 一种古细菌对非合成产甲烷烃的降解作用
Pub Date : 2023-10-18 DOI: 10.3897/aca.6.e111614
Zhuo Zhou, Cuijing Zhang, Pengfei Liu, Lin Fu, Rafael Laso-Pérez, Lu Yang, Liping Bai, Jiang Li, Min Yang, Junzhang Lin, Weidong Wang, Gunter Wegener, Meng Li, Lei Cheng
Methanogenic hydrocarbon biodegradation alters the composition of many subsurface oil reservoirs (Jones et al. 2007). This process reduced the crude oil quality by removing alkanes and thus increasing the oil viscosity. The process has been described for syntrophic associations of hydrocarbon-degrading bacteria and methanogenic archaea (Zengler et al. 1999, Dolfing et al. 2007). However, recent culture-independent studies suggest that the archaeon ‘ Candidatus Methanoliparum’ may combine alkane degradation and methanogenesis (Laso-Pérez et al. 2019, Borrel et al. 2019). Here we cultured Ca . Methanoliparum from a subsurface oil reservoir. To study this culture, situ hybridization, metagenomics and metatranscriptomics were combined with stable isotope probing and metabolite analyses for describing its functioning and assessing its potential role in reservoir chemistry. Incubated an anoxic oily sludge of the Shengli oilfield with sulfate-free medium, we established a methanogenic culture. This culture consumed various different long-chain alkanes, but also alkyl-benzenes and alkyl-cycloalkanes, and produced methane and CO 2 as products (Fig. 1a-b). Our analyses revealed that our culture is dominated by a single archaeon, Ca. Methanoliparia (green). To study the specific turnover of n -alkanes, the cultures were supplemented with 1,2- 13 C-labelled or unlabelled n -hexadecane (Fig. 2). Within 100 days of incubation, both compounds were quantitatively converted into methane and carbon dioxide. In the 13 C-labelling experiment, around 0.46 mmol of 13 CH 4 and around 0.15 mmol of 13 CO 2 were produced, which was equal to 85% to 92% of the stoichiometric conversion of the supplemented labelled hexadecane according to 4C 16 H 34 + 30H 2 O -- 49CH 4 + 15CO 2 (Fig. 2a-d) . We examined the functioning of Ca. Methanoliparum in the hexadecane-degrading culture using amplicon sequencing, metagenomics and metatranscriptomics. In the archaeal domain, the relative abundance of Ca. Methanoliparum in the hexadecane-degrading cultures comprised up to 75% of the total abundance according to analysis of archaeal 16S rRNA genes. Furthermore, Ca. Methanoliparum accounted for approximately 34–40% of the total microbial community as determined by metagenomic read recruitment estimation (Fig. 2e-f). We analysed the gene expression patterns of Ca. Methanoliparum during methanogenic hexadecane degradation (Fig. 3). The genes encoding the methanogenic hexadecane degradation pathway ranked among the top 10% to 25% of all Ca . M. thermophilum transcribed genes. Moreover, genes of Ca . M. thermophilum encoding ACR and MCR ranked among the top 2% of all transcribed genes within the whole community (Fig. 3b). The MAGs of Ca . M. thermophilum also showed the highest transcription among all described MAGs (Fig. 3c). These analyses indicate that Ca . M. thermophilum performs both the degradation of hexadecane and the formation of methane. We searched the cell extracts of the hexadeca
产甲烷烃的生物降解改变了许多地下油藏的组成(Jones et al. 2007)。该工艺通过去除烷烃降低了原油质量,从而增加了原油的粘度。这一过程已被描述为碳氢化合物降解细菌和产甲烷古细菌的共生关系(Zengler等人,1999年,Dolfing等人,2007年)。然而,最近的非培养研究表明,古菌“Candidatus Methanoliparum”可能结合烷烃降解和甲烷生成(laso - pembroriz et al. 2019, Borrel et al. 2019)。这里我们培养Ca。从地下油藏中提取甲醇。为了研究这种培养物,将原位杂交、宏基因组学和亚转录组学与稳定同位素探测和代谢物分析相结合,以描述其功能并评估其在储层化学中的潜在作用。用无硫酸盐培养基培养胜利油田缺氧含油污泥,建立了产甲烷培养基。这种培养消耗各种不同的长链烷烃,也消耗烷基苯和烷基环烷烃,并产生甲烷和二氧化碳作为产物(图1a-b)。我们的分析显示,我们的文化是由一个单一的古菌,Ca. Methanoliparia(绿色)。为了研究正烷烃的具体转化率,在培养物中添加1,2- 13 c标记或未标记的正十六烷(图2)。在培养100天内,这两种化合物被定量地转化为甲烷和二氧化碳。在13c标记实验中,产生了约0.46 mmol的13ch 4和约0.15 mmol的13co 2,这相当于根据4c16h34 + 30h2o—49ch4 + 15CO 2,补充标记的十六烷的化学计量转化率的85%至92%(图2a-d)。我们使用扩增子测序、宏基因组学和亚转录组学检测了Ca. Methanoliparum在十六烷降解培养中的功能。在古细菌领域,根据对古细菌16S rRNA基因的分析,十六烷降解培养物中Ca. Methanoliparum的相对丰度占总丰度的75%。此外,根据宏基因组reads招募估计,Ca. Methanoliparum约占总微生物群落的34-40%(图2e-f)。我们分析了Ca. Methanoliparum在产甲烷十六烷降解过程中的基因表达模式(图3)。编码产甲烷十六烷降解途径的基因在所有Ca中排名前10%至25%。嗜热分枝杆菌转录基因。此外,Ca。在整个群落中编码ACR和MCR的嗜热分枝杆菌在所有转录基因中排名前2%(图3b)。加州的MAGs。在所有描述的mag中,嗜热分枝杆菌的转录率也最高(图3c)。这些分析表明Ca。嗜热分枝杆菌既能降解十六烷又能生成甲烷。我们使用Q-Exactive Plus Orbitrap质谱法在十六烷降解培养物的细胞提取物中寻找十六烷基com的形成。未标记的十六烷培养物有一个显著的质量峰,m/z = 365.21868,与合成的正品hexadecyl-CoM的质量相匹配。两个峰的裂解得到十六烷基硫醇(m/z = 257.23080, c16h33s−)、乙烯磺酸盐(m/z = 106.98074, c2h3so3−)和亚硫酸氢盐(m/z = 80.96510, hso3−)。此外,与未标记组相比,提供1,2- 13 C-hexadecyl-CoM的培养物在m/z = 367.22524处产生峰值,1,2- 13 C-hexadecyl-thiol的片段在259.23721处产生峰值,质量位移为2个单位。这些分析证实了正十六烷的活化为hexadecyl-CoM(图4)。在这里,我们展示了Ca. Methanoliparum的ACRs对不同烃类的活化,将该酶的底物范围扩大到不可预见的化合物数量。Ca。Methanoliparum将长链烷烃和烷基取代烃的降解与甲烷的生成结合起来,被认为是烷基化。它的代谢途径代表了一种额外的甲烷生成模式,除了二氧化碳还原,甲基化,甲基还原,醋酸发酵和最近报道的甲氧基营养。Ca。Methanoliparum生长的温度范围很广,至少在35 - 55℃之间,覆盖了大多数生物降解油藏的温度范围。事实上,Ca。甲醇oliparum存在于全球各种缺氧富烃环境中。由此,展示了Ca的独特之处。烃类转化过程中的甲醇异位可能会从根本上改变我们对原油转化和地下油藏生物地球化学过程的看法。Ca的未来研究。
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引用次数: 0
Glacial secrets uncovered: Revealing the modes of survival of metabolically active microbial communities entrapped in polar glacial ice 冰川秘密被揭开:揭示极地冰川冰中代谢活跃的微生物群落的生存模式
Pub Date : 2023-10-18 DOI: 10.3897/aca.6.e108883
Brady O'Connor, Lyle Whyte
Glaciers, once dismissed as inhospitable environments, have been overlooked in scientific investigations. Previous studies have primarily focused on the supraglacial (cryoconite holes, snow, and meltwater) and subglacial (bedrock and soils, among others) environments, neglecting the englacial (inside ice) realm. Despite evidence demonstrating the survival of cells in glacial/sea ice (Christner 2000, Junge et al. 2002, Miteva et al. 2004, Miteva and Brenchley 2005) and theoretical predictions and indirect evidence hinting at active microbial communities within glacial ice (Krembs et al. 2002, Junge et al. 2004, Price and Sowers 2004, Tung et al. 2005, Tung et al. 2006, Rohde et al. 2008), the englacial environment has remained largely unexplored. Recognizing that englacial ice hosts potentially active microbial communities carries significant implications for the future of these habitats in the face of escalating global warming and glacial retreat. As glaciers rapidly melt due to the effects of global warming, the liberation of these microbial communities will undoubtedly exert profound effects on local ecosystems and biogeochemical cycles, presenting an array of unknown consequences. Furthermore, considering the ability of microbial communities to persist in such extreme conditions on Earth, they become intriguing subjects for the search for life on celestial bodies such as Mars, Europa, Enceladus, and Titan, all of which house vast ice deposits. However, several fundamental questions persist. The extent of metabolic activity in glacial ice remains uncertain, as does the identification of microorganisms capable of sustaining metabolic processes. Most importantly, understanding the survival strategies employed by these organisms in such an extreme environment remains unknown. To answer these questions, we present metagenomes and what we believe to be the first metatranscriptomes ever analyzed from glacial ice. We have developed a method which allows us to melt ice cores without altering the mRNA profile of the microorganisms within, allowing us to directly determine how microorganisms are able to survive in such a hostile environment. One-to-two-meter cores were taken from the surface of White Glacier, Axel Heiberg Island and from the Devon Island ice cap, both in the Canadian High Arctic. A depth of 70 – 90 cm and 131 – 151 cm was chosen for analysis from White Glacier and Devon Island respectively. In the lab, to remove surface contamination from the cores, the outer 0.5 cm of the cores was removed, and the inner cores were sprayed with 70% ethanol. The decontaminated core subsections were melted at 4°C directly into DNA/RNA Shield (1:1 ratio) which preserved the microbial communities on contact, preventing changes to the metagenome or metatranscriptome during melt. Melted samples were filtered and nucleic acids extracted before DNA and RNA sequenced on an Illumina NovaSeq 6000 sequencer. Sequencing yield from Devon ice cap was low, resulting in
冰川,曾经被认为是不适宜居住的环境,在科学调查中被忽视了。以往的研究主要集中在冰上(冰孔、雪和融水)和冰下(基岩和土壤等)环境,而忽视了冰上(冰内)领域。尽管有证据表明冰川/海冰中细胞存活(Christner 2000, Junge等人2002,Miteva等人2004,Miteva和Brenchley 2005),理论预测和间接证据暗示冰川冰中活跃的微生物群落(Krembs等人2002,Junge等人2004,Price和Sowers 2004, Tung等人2005,Tung等人2006,Rohde等人2008),但冰川环境在很大程度上仍未被探索。认识到冰川冰承载着潜在的活跃微生物群落,对于这些栖息地在面对不断升级的全球变暖和冰川退缩时的未来具有重要意义。由于全球变暖的影响,冰川迅速融化,这些微生物群落的解放无疑将对当地生态系统和生物地球化学循环产生深远影响,并带来一系列未知的后果。此外,考虑到微生物群落在地球上如此极端条件下的生存能力,它们成为了在火星、木卫二、土卫二和土卫六等天体上寻找生命的有趣对象,这些天体上都有大量的冰沉积物。然而,几个基本问题依然存在。冰川冰中代谢活动的程度仍然不确定,能够维持代谢过程的微生物的鉴定也是如此。最重要的是,这些生物在如此极端的环境中所采用的生存策略仍然是未知的。为了回答这些问题,我们提出了宏基因组和我们认为是第一个从冰川冰中分析的元转录组。我们已经开发出一种方法,使我们能够在不改变冰芯内微生物mRNA谱的情况下融化冰芯,从而使我们能够直接确定微生物如何能够在如此恶劣的环境中生存。从加拿大北极高地的白色冰川、阿克塞尔海伯格岛和德文岛冰盖表面采集了一到两米的岩芯。白冰川和德文岛的分析深度分别为70 ~ 90 cm和131 ~ 151 cm。在实验室中,为了去除岩心表面的污染,将岩心外0.5 cm处去除,并向内层喷70%乙醇。去污的核心亚段在4°C下直接融化到DNA/RNA盾中(1:1比例),保存接触的微生物群落,防止融化过程中宏基因组或元转录组的变化。在Illumina NovaSeq 6000测序仪上进行DNA和RNA测序之前,对熔化的样品进行过滤和核酸提取。德文冰帽的测序产量低,导致宏基因组和超转录组序列很少,而怀特冰川产生了4600万reads的宏基因组和5600万reads的超转录组。这些数据表明,白色冰川以蓝藻菌和放线菌为主,德文冰帽以变形菌为主。此外,对来自怀特冰川的微生物进行的超转录组学分析显示,微生物群落代谢活跃,依赖于含氧光合作用,并通过卡尔文循环和3-羟丙酸循环进行碳固定。与有氧呼吸、有氧一氧化碳氧化、硫氧化、亚硝酸盐氧化、一氧化氮和一氧化二氮还原以及无氧光合作用相关的转录本也存在。冷适应微生物具有多种应对低温的机制,白冰川的微生物群落也不例外。冷反应基因高度表达,主要是在低温下增加膜和细胞壁流动性的膜和肽聚糖修饰蛋白,在低温下提高蛋白质合成效率的翻译和转录因子,以及在低温下稳定RNA的冷休克蛋白。从白冰川冰芯中还获得了2个高质量和5个中等质量的元基因组组装基因组(MAGs),其中包括一个完整度为99.86%的Coleofasciculaceae蓝藻基因组,其转录本与有氧呼吸、含氧光合作用、碳固定(卡尔文循环)和氧化亚氮还原相关。与冷反应相关的转录本包括冷休克蛋白、DNA修复、膜和肽聚糖改变、渗透应激、转录和翻译因子等。参与DNA复制的转录本甚至被映射到这种生物的基因组中,这表明它能够在冰中进行细胞分裂。
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