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Proteomic Alterations and Antimicrobial Effects of Postbiotics from Probiotic Lactic Acid Bacteria and Yeast Against Multidrug-Resistant Salmonella Typhimurium. 益生菌乳酸菌和酵母菌对多重耐药鼠伤寒沙门氏菌的蛋白质组学改变和抑菌作用。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-25 DOI: 10.1007/s00284-025-04690-4
Mahdi Asghari Ozma, Seyyed Reza Moaddab, Mohammad Asgharzadeh, Fadhil S Kamounah, Amin Abbasi, Niloofar Fallahi Alileh, Hossein Samadi Kafil
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引用次数: 0
Wheat-associated Antagonistic Bacteria Exerts Biocontrol Activity Against Fungal Growth and Deoxynivalenol Production in Fusarium Graminearum. 小麦相关拮抗菌对小麦镰刀菌真菌生长和脱氧雪腐镰刀菌醇产生的生物防治作用
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-24 DOI: 10.1007/s00284-025-04692-2
Ziting Ding, Wenjing Fu, Ping Zhou, Tao Gao, Zhitian Zheng

Fusarium head blight (FHB), primarily caused by Fusarium graminearum, leads to severe contamination of wheat grains with the mycotoxin deoxynivalenol (DON), posing a significant threat to grain safety and quality. While chemical control remains common, its efficacy is increasingly challenged by fungicide resistance and potential stimulation of DON production. Biological control represents a promising alternative, yet the identification of effective antagonistic agents and elucidation of their mechanisms are still needed. This study evaluated the biocontrol potential of the endophytic bacterium Bacillus velezensis strain 6W1 against FHB and DON contamination. The crude antagonistic extract exhibited a clear dose-dependent inhibitory effect on the mycelial growth of F. graminearum. The EC₅₀ value was determined to be 210.79 µg/mL, and complete growth inhibition (100%) was achieved when the extract concentration reached 800 µg/mL. Likewise, DON biosynthesis was significantly suppressed in a concentration-dependent manner, with DON levels reduced to 0 at 800 µg/mL of the crude extract.Furthermore, macrolactin A was identified as the core antagonistic compound responsible for the observed antifungal activity. A field trial confirmed that strain 6W1 application significantly reduced FHB severity and DON accumulation in wheat grains. These findings demonstrate the potential of B. velezensis 6W1 as an effective biocontrol agent against FHB and provide a theoretical basis for its application in managing DON contamination.

镰刀菌头疫病(Fusarium head blight, FHB)主要由稻瘟病菌(Fusarium graminearum)引起,导致小麦籽粒受到真菌毒素脱氧雪腐镰刀菌醇(DON)的严重污染,对粮食安全和质量构成重大威胁。虽然化学防治仍然普遍,但其有效性日益受到杀菌剂耐药性和潜在的DON生产刺激的挑战。生物防治是一种很有前途的替代方法,但仍然需要确定有效的拮抗剂并阐明其机制。本研究评价了内生芽孢杆菌velezensis菌株6W1对FHB和DON污染的生物防治潜力。拮抗粗提物对禾谷镰刀菌菌丝生长有明显的剂量依赖性抑制作用。确定EC₅0值为210.79µg/mL,当提取物浓度达到800µg/mL时,实现完全生长抑制(100%)。同样,DON的生物合成也以浓度依赖性的方式被显著抑制,当粗提取物含量为800µg/mL时,DON的水平降至0。此外,大泌乳素A被确定为核心拮抗化合物,负责观察到的抗真菌活性。田间试验证实,施用菌株6W1显著降低了小麦籽粒中赤霉病的严重程度和DON的积累。这些研究结果表明,velezensis 6W1具有作为一种有效的FHB生物防治剂的潜力,并为其在DON污染管理中的应用提供了理论依据。
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引用次数: 0
Assessment of Antioxidant, Antimicrobial, and Cytotoxicity of Endophytic Fungi Isolated from the Root and Bark of Terminalia phanerophlebia (Engl. & Diels). 黄连根和树皮内生真菌的抗氧化、抗菌和细胞毒性研究[j]。&一昼夜的)。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04637-9
Folasade O Banji-Onisile, Nneka A Akwu, Tosin A Olasehinde, Samson O Egbewale, Ademola O Olaniran

Endophytic fungi represent promising sources of bioactive compounds with therapeutic potential. The biological effects of ethyl acetate extracts from two endophytic fungi (Aspergillus fumigatus and Pleosporales) isolated from Terminalia phanerophlebia root and bark tissues were examined in this study. Antimicrobial efficacy was evaluated using disc diffusion, minimum inhibitory concentration (MIC), and bactericidal/fungicidal assays against human pathogens. Both extracts demonstrated significant activity against multidrug-resistant Staphylococcus aureus (MRSA), with A. fumigatus showing superior potency (MIC: 15.6 µg/mL) and Pleosporales, 62.5 µg/mL. Antioxidant properties were assessed via 2,2-diphenyl-1-picrylhydrazy (DPPH) and 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid (ABTS) radical scavenging assays, revealing dose-dependent activity with IC₅₀ values of 167.39 and 132.33 µg/mL for A. fumigatus, and 209.69 and 174.20 µg/mL for Pleosporales, respectively. Preliminary cytotoxic effects were measured using MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide, a tetrazole) assay on breast cancer (MCF-7), hepatocellular carcinoma (HepG2), and normal kidney (HEK 293) cells. Both extracts exhibited selective cytotoxicity against cancer cells with minimal effects on normal cells. Apoptotic induction was confirmed through ethidium bromide/acridine orange staining. Chemical profiling via gas chromatography-mass spectroscopy (GC-MS) and Fourier transform infrared (FT-IR) spectroscopy identified bioactive compounds, including pyrrolo[1,2-a]pyrazine derivatives, phenolic compounds, and ascorbic acid esters. These findings highlight the therapeutic potential of endophytic fungi from T. phanerophlebia as a source of antimicrobial, antioxidant, and potential anticancer agents. However, further investigations are needed to establish these findings in clinical studies.

内生真菌是具有治疗潜力的生物活性化合物的有希望的来源。研究了烟曲霉(Aspergillus fumigatus)和多孢子菌(Pleosporales)两种内生真菌(Terminalia phanerophlebia根和树皮)的乙酸乙酯提取物的生物学效应。采用圆盘扩散、最小抑制浓度(MIC)和对人类病原体的杀菌/杀真菌试验来评估抗菌效果。两种提取物对耐多药金黄色葡萄球菌(MRSA)均有显著的抑制作用,其中烟曲霉(A. fumigatus)和多孢子菌(Pleosporales)的MIC分别为15.6µg/mL和62.5µg/mL。通过2,2-二苯基-1-吡啶肼(DPPH)和2,2'-氮基-双(3-乙基苯并噻唑-6-磺酸(ABTS)自由基清除试验评估抗氧化性能,揭示了剂量依赖的活性,对烟曲霉的IC₅0值分别为167.39和132.33µg/mL,对Pleosporales的IC₅0值分别为209.69和174.20µg/mL。采用MTT(3-(4,5-二甲基噻唑-2-基)-2,5-二苯基溴化四唑,一种四唑)试验对乳腺癌(MCF-7)、肝细胞癌(HepG2)和正常肾(HEK 293)细胞进行初步细胞毒作用测定。两种提取物均表现出对癌细胞的选择性细胞毒性,对正常细胞的影响最小。通过溴化乙啶/吖啶橙染色证实其诱导凋亡。化学分析通过气相色谱-质谱(GC-MS)和傅里叶变换红外(FT-IR)光谱鉴定了生物活性化合物,包括吡咯[1,2-a]吡嗪衍生物、酚类化合物和抗坏血酸酯。这些发现突出了嗜菌T.内生真菌作为抗菌、抗氧化和潜在抗癌药物的治疗潜力。然而,需要进一步的调查以在临床研究中证实这些发现。
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引用次数: 0
Research Advances on the Impact of Gut Microbiota on COPD: Exploring New Perspectives on the Microbiota-Gut-Lung Axis. 肠道菌群对COPD影响的研究进展:探索微生物-肠-肺轴的新视角。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04664-6
Qiongyue Zhang, Xingmeng Song, Ahmad Khan, Jing Shang, Jianjiang Xue
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引用次数: 0
Psychrotolerant Erwinia psychrophila sp. nov. and Erwinia magellanica sp. nov. Isolated from Penguin Faeces. 从企鹅粪便中分离的嗜冷Erwinia psychrophila sp. 11和麦哲伦Erwinia sp. 11 .。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04670-8
Ivo Sedláček, Pavla Holochová, Karel Sedlář, Eva Staňková, Mohammad Umair, Ondrej Šedo, Jitka Vives, Vendula Koublová, Dana Nováková, Pavel Švec
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引用次数: 0
Effect of Salt Concentration on Microbial Communities and Flavor Profiles in Fermented Cowpea. 盐浓度对发酵豇豆微生物群落及风味特征的影响
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04681-5
Hong Xu, Danyang Li, Xue Jiang, Qi Pei, Zhengqin Li, Mingyong Xie, Tao Xiong, Zhanggen Liu

Fermented cowpea is an important traditional fermented vegetable in China, widely consumed, particularly in southern regions. However, few studies have investigated the bacterial communities and flavor compounds in fermented cowpea, especially regarding the influence of salt concentration on microbial structure and metabolite dynamics. Therefore, this study investigated the effects of four salt concentrations (0%, 3%, 6%, and 9%) on microbial composition and metabolites in fermented cowpea. The results showed that 1-octen-3-ol, linalool, phenylethyl alcohol, 3-methyl-1-butanol acetate, 2-octanone, propanoic acid, 3-methyl-butanoic acid, benzeneacetaldehyde, and indole significantly contributed to the flavor of fermented cowpea. Lactobacillus, Acinetobacter, Pseudomonas, Muribaculaceae, and Bacteroides were the dominant bacterial genera. Furthermore, two-way orthogonal partial least squares (O2PLS) analysis revealed potential correlations between eight bacterial genera (Lactobacillus, Clostridium_sensu_stricto_1, Prevotella_9, Caproiciproducens, Bacillus, Lysinibacillus, Burkholderia-Caballeronia-Paraburkholderia, Pseudomonas, Acinetobacter, and Terribacillus) and nine characteristic flavor compounds, suggesting their significant impact on flavor profiles. Salt concentration was shown to influence both microbial composition and flavor characteristics. Additionally, the chemical profiles and bacterial communities of cowpea fermented with 3% salt were similar to those fermented with 6% salt. Fermentation at 3% salt concentration not only reduces production costs but also lowers health risks associated with high salt intake, providing an improved option for large-scale production.

豇豆是中国重要的传统发酵蔬菜,在南方地区消费广泛。然而,对发酵豇豆中细菌群落和风味成分的研究很少,特别是对盐浓度对微生物结构和代谢物动力学的影响研究较少。因此,本研究研究了四种盐浓度(0%、3%、6%和9%)对发酵豇豆微生物组成和代谢物的影响。结果表明:1-辛烯-3-醇、芳樟醇、苯乙醇、3-甲基-1-丁醇醋酸酯、2-辛酮、丙酸、3-甲基-丁酸、苯乙醛和吲哚对发酵豇豆的风味有显著影响。乳酸菌、不动杆菌、假单胞菌、Muribaculaceae和拟杆菌属是优势菌属。此外,双向正交偏最小二乘法(O2PLS)分析显示,8种细菌属(Lactobacillus、Clostridium_sensu_stricto_1、Prevotella_9、Caproiciproducens、Bacillus、Lysinibacillus、Burkholderia-Caballeronia-Paraburkholderia、Pseudomonas、Acinetobacter和Terribacillus)与9种特征风味化合物之间存在潜在的相关性,表明它们对风味特征有显著影响。盐浓度对微生物组成和风味特性都有影响。此外,3%盐发酵的豇豆的化学特征和细菌群落与6%盐发酵的豇豆相似。3%盐浓度的发酵不仅降低了生产成本,还降低了与高盐摄入相关的健康风险,为大规模生产提供了更好的选择。
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引用次数: 0
Hidden Helpers: Exploring Plant Growth-Promoting Activities of Endophytes and their Functional Diversity Across Different Organs of Saffron crocus (Crocus sativus L.). 隐藏的帮手:探寻藏红花(crocus sativus L.)植物内生菌的促生长活性及其在不同器官中的功能多样性
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04683-3
Bushra Jan, Zafar A Reshi, F A Mohiddin

This study addresses a critical knowledge gap by evaluating endophytes from Crocus sativus for a range of plant growth-promoting (PGP) activities and assessing their functional diversity using community-weighted mean (CWM) and functional diversity (FD) indices-an area that remains largely unexplored in plant-microbe interactions. We examined 84 potential endophytes for auxin production, ammonia and urease activity, phosphate solubilization, siderophore and amylase production, and antifungal properties. Endophytes belonging to Dothideomycetes exhibited only auxin production and urease activity, while members of other groups were positive for all assessed traits. FD indices varied significantly across sites and plant organs, with roots generally showing the highest values. The CWM of functional traits also differed among organs, with roots and corms displaying the highest values for auxin, ammonia, phosphate solubilization, and antifungal activity. Bacillus species, particularly B. cereus, were notable for auxin, amylase, and antifungal activities, while Streptomyces and Trichoderma strains also showed strong antifungal effects. Significant effects of site and organ type were observed for several functional traits, highlighting ecological variability across environments and plant parts. Additionally, endophyte responses to drought, temperature, and pH stress were assessed, with B. cereus, Streptomyces lydicus, and Trichoderma harzianum demonstrating superior growth under stress conditions. These findings advance ecological understanding of plant-endophyte interactions and suggest innovative strategies to enhance saffron yield and disease resistance in response to the growing challenges faced in saffron cultivation.

本研究通过评估藏红花内生菌的植物促生长(PGP)活性,并利用群落加权平均(CWM)和功能多样性(FD)指数评估其功能多样性,解决了一个关键的知识空白,这一领域在植物与微生物的相互作用中仍未得到很大的探索。我们检测了84种潜在内生菌的生长素产量、氨和脲酶活性、磷酸盐增溶性、铁载体和淀粉酶产量以及抗真菌性能。dothideomytes的内生菌仅表现出生长素生产和脲酶活性,而其他组的成员在所有评估性状上均呈阳性。不同部位、不同器官的FD指数差异显著,以根系最高。不同器官的功能性状CWM也存在差异,根和球茎的生长素、氨氮、磷酸盐增溶和抗真菌活性最高。芽孢杆菌,尤其是蜡样芽孢杆菌,具有显著的生长素、淀粉酶和抗真菌活性,而链霉菌和木霉菌株也表现出很强的抗真菌作用。地点和器官类型对一些功能性状有显著影响,突出了不同环境和植物部位的生态变异。此外,我们还评估了内生菌对干旱、温度和pH胁迫的响应,蜡样芽孢杆菌、吕底链霉菌和哈茨木霉在胁迫条件下表现出优越的生长。这些发现促进了对植物与内生菌相互作用的生态学理解,并提出了提高藏红花产量和抗病性的创新策略,以应对藏红花栽培面临的日益增长的挑战。
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引用次数: 0
Characterization and Genomic Analysis of the First Phage Infecting Vibrio hyugaensis, vB_VhyS_SJ1. 感染水合弧菌第一噬菌体vB_VhyS_SJ1的鉴定与基因组分析
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04680-6
Suqing Zhang, Wei Wang, Xin Chen, Ziyue Wang, Xiangyun Chen, Zhaobin Zheng, Ni Wang, Yeong Yik Sung, Wen Jye Mok, Li Lian Wong, Min Wang, Hongbing Shao, Yundan Liu, Yantao Liang

Vibrio hyugaensis is an opportunistic pathogen widely distributed in marine environments. Phages are considered an important method for controlling pathogenic bacteria. However, phages infecting V. hyugaensis have not yet been reported. In this study, a novel phage infecting V. hyugaensis, named vB_VhyS_SJ1, was isolated from nearshore surface seawater of Qingdao, China. Transmission electron microscopy showed that it had a siphoviral morphology. vB_VhyS_SJ1 exhibits a latent period of 10 min and a burst size of 52 ± 2 PFU/infected bacterium. It is stable over a temperature range of 4 °C to 65 °C and remains stable within a pH range of 5 to 10. The inhibition ability of the vB_VhyS_SJ1 against the V. hyugaensis was tested in vitro using the vB_VhyS_SJ1 with four multiplicity of infection (MOI) values. All treated groups effectively inhibited the growth compared to the untreated culture of V. hyugaensis within 12 h. The genome of vB_VhyS_SJ1 is double-stranded DNA, with a genome size of 121,361 bp, containing 174 putative open reading frames (ORFs). Four auxiliary metabolic genes (AMGs) were predicted, and a total of 25 tRNA genes were identified. Phylogenetic and genomic network analysis demonstrated that vB_VhyS_SJ1 belongs to the Pogseptimavirus genus of the Demerecviridae family. Additionally, biogeographical distribution analysis found that vB_VhyS_SJ1 is primarily found in temperate, and tropical epipelagic zones with low abundance. Overall, this study provides a characterization of the first phage infecting the opportunistic pathogenic V. hyugaensis.

水合弧菌是一种广泛分布于海洋环境中的条件致病菌。噬菌体被认为是控制致病菌的重要方法。然而,感染水合弧菌的噬菌体尚未见报道。本研究从青岛近岸表层海水中分离到了一株感染水合弧菌的新型噬菌体vB_VhyS_SJ1。透射电镜显示其具有虹膜病毒形态。vB_VhyS_SJ1潜伏期为10 min,爆发大小为52±2 PFU/感染菌。它在4℃至65℃的温度范围内稳定,在5 ~ 10的pH范围内保持稳定。利用具有4个感染多重度(MOI)的vB_VhyS_SJ1体外检测了vB_VhyS_SJ1对水合弧菌的抑制能力。与未处理组相比,所有处理组在12 h内均有效抑制了水合弧菌的生长。vB_VhyS_SJ1基因组为双链DNA,基因组大小为121,361 bp,包含174个假定的开放阅读框(orf)。预测了4个辅助代谢基因(AMGs),共鉴定了25个tRNA基因。系统发育分析和基因组网络分析表明,vB_VhyS_SJ1属于deerecviriae科Pogseptimavirus属。此外,生物地理分布分析发现vB_VhyS_SJ1主要分布于温带和热带低丰度的上层海域。总的来说,本研究提供了感染条件致病性水合弧菌的第一个噬菌体的特征。
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引用次数: 0
Direct-Fed Microbials Positively Influence Intestine Histomorphometry, Liver Histopathology and Apoptosis Modulation in Weaned Piglets Fed with Naturally Contaminated Aflatoxin B1 Diet. 直接饲喂微生物对黄曲霉毒素B1污染断奶仔猪肠道组织形态学、肝脏组织病理学和细胞凋亡调节有积极影响。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04663-7
A L Cristofolini, V Poloni, M Fiorimanti, A Magnoli, J Parada, K Gómez, C G Barbeito, C Merkis, L Cavaglieri
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引用次数: 0
Molecular Framework of Multidrug Resistance in Pseudomonas aeruginosa. 铜绿假单胞菌多药耐药的分子框架。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2025-12-22 DOI: 10.1007/s00284-025-04610-6
Mrinalini Kannan, Renitta Jobby, Satish Kumar Rajasekharan, Rekha Arya, Vinothkannan Ravichandran

Antimicrobial resistance (AMR) in Pseudomonas aeruginosa (PA) represents an escalating public health emergency in India, where factors such as unregulated antibiotic usage, limited infection control, and dense hospital environments have precipitated a dramatic rise in multidrug-resistant (MDR) and extensively drug-resistant (XDR) PA isolates. Recent Indian surveillance data indicate that resistance rates among clinical PA isolates often exceed 70% for key antibiotics, with carbapenem resistance surpassing 60% in intensive care settings and up to 98% for agents such as ceftriaxone in some cohorts. The World Health Organization designates PA as a critical-priority pathogen owing to its intrinsic and acquired resistance to nearly all available antibiotics, dramatically compromising patient outcomes, especially in high-burden regions like India. This review synthesizes the epidemiology of PA resistance in India, elucidating both the clinical prevalence and principal societal drivers-including over-the-counter antibiotic distribution and the prevalence of irrational fixed-dose combinations. A comprehensive analysis is provided of the molecular mechanisms underlying AMR in Indian PA isolates: the high prevalence of metallo-β-lactamases (e.g., blaNDM-1, blaVIM), overexpression of efflux pump systems (such as MexAB-OprM in over 50% of MDR isolates), porin loss (notably OprD in carbapenem-resistant strains), target site mutations, and widespread biofilm formation which affects up to 80% of device-related infections. Understanding these pathways is imperative for optimizing therapeutic regimens, informing antimicrobial stewardship, and directing research toward urgently needed new interventions for PA in India's unique clinical landscape. Additionally this review also talks about the various novel strategies which are currently in the development stages that can prove to be potent against PA in the future.

铜绿假单胞菌(PA)的抗菌素耐药性(AMR)代表着印度不断升级的突发公共卫生事件,在印度,抗生素使用不受管制、感染控制有限以及医院环境密集等因素导致了多重耐药(MDR)和广泛耐药(XDR) PA分离株的急剧增加。印度最近的监测数据表明,临床PA分离株对关键抗生素的耐药率通常超过70%,在重症监护环境中碳青霉烯类药物的耐药率超过60%,在一些队列中对头孢曲松等药物的耐药率高达98%。由于其对几乎所有可用抗生素的内在和获得性耐药性,特别是在印度等高负担地区,世界卫生组织将PA指定为关键优先病原体,极大地影响患者的预后。这篇综述综合了印度PA耐药的流行病学,阐明了临床流行和主要的社会驱动因素,包括非处方抗生素的分布和不合理的固定剂量组合的流行。对印度PA分离株AMR的分子机制进行了全面分析:金属β-内酰胺酶(例如blaNDM-1, blaVIM)的高流行率,外排泵系统的过表达(例如超过50%的MDR分离株中的MexAB-OprM),孔蛋白丢失(特别是碳青霉烯类耐药菌株中的OprD),靶点突变和广泛的生物膜形成,影响高达80%的器械相关感染。了解这些途径对于优化治疗方案,告知抗菌剂管理以及指导研究在印度独特的临床环境中迫切需要的PA新干预措施至关重要。此外,本综述还讨论了目前处于开发阶段的各种新策略,这些策略在未来可能被证明是有效的。
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引用次数: 0
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Current Microbiology
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