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Bordetella saccharivorans sp. nov., Isolated from Leaf Soil. 从叶片土壤中分离的嗜糖波氏杆菌。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-09 DOI: 10.1007/s00284-026-04735-2
Hironaga Akita, Yuya Itoiri, Yoshiki Shinto, Zen-Ichiro Kimura
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引用次数: 0
Eco-Friendly Synthesis of Magnesium Oxide Nanoparticles Using Citrullus colocynthis and their Synergistic Antimicrobial Activity against Drug-Resistant Pathogens. 利用瓜泥合成氧化镁纳米颗粒及其对耐药病原菌的协同抑菌活性。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-09 DOI: 10.1007/s00284-026-04748-x
Maqsood Qaisar, Abdul Rehman, Iffat Naz, Hassan Naveed, Baharullah Khattak, Muhammad Qasim

The escalating threat of antimicrobial resistance (AMR) necessitates the development of innovative therapeutic approaches. This study reports the green synthesis of magnesium oxide nanoparticles (MgO-NPs) using Citrullus colocynthis extract, a medicinal plant rich in bioactive compounds, as a sustainable alternative to conventional antibiotics. The synthesized MgO-NPs were characterized by UV-Vis spectroscopy (absorption peak at 250 nm), XRD (cubic crystalline structure, 15-25 nm size), SEM-EDX (agglomerated spherical morphology, Mg/O ratio 2.6:1), and FTIR (Mg-O vibration at 860 cm- 1). The nanoparticles exhibited potent, dose-dependent antibacterial activity against multidrug-resistant (MDR) Staphylococcus aureus [MIC: 35.3 ± 2.1 µg/ml (0.0353 ± 0.0021 mg/ml); MBC: 97.1 ± 3.5 µg/ml (0.0971 ± 0.0035 mg/ml)] and Escherichia coli [MIC: 47.5 ± 4.2 µg/ml (0.0475 ± 0.0042 mg/ml); MBC: 105.5 ± 6.8 µg/ml (0.1055 ± 0.0068 mg/ml)], with a bactericidal mode of action (MBC/MIC ≤ 4). Remarkably, MgO-NPs restored susceptibility to β-lactam antibiotics (ceftazidime and penicillin) in resistant strains, demonstrating synergistic effects. Antifungal activity of MgO-NPs against Candida albicans (17.3 ± 0.7 mm) and Aspergillus niger (14.4 ± 0.8 mm) at a concentration of 10 mg/ml was also observed. Phytochemical analysis revealed solvent-dependent bioactive constituents in C. colocynthis, with aqueous extracts rich in tannins/phenolics and methanolic extracts rich in flavonoids/terpenoids. This is the first report demonstrating the restoration of antibiotic susceptibility by MgO-NPs synthesized from C. colocynthis extract.

抗菌素耐药性(AMR)的威胁不断升级,需要开发创新的治疗方法。本研究报道了利用富含生物活性化合物的药用植物Citrullus colocynthis提取物绿色合成氧化镁纳米颗粒(MgO-NPs),作为传统抗生素的可持续替代品。采用UV-Vis光谱(250 nm处吸收峰)、XRD (15 ~ 25 nm尺寸的立方晶结构)、SEM-EDX(球状形貌,Mg/O比2.6:1)和FTIR (Mg-O在860 cm- 1处振动)对合成的MgO-NPs进行了表征。纳米颗粒对多重耐药(MDR)金黄色葡萄球菌表现出有效的剂量依赖性抗菌活性[MIC: 35.3±2.1µg/ml(0.0353±0.0021 mg/ml);MBC: 97.1±3.5µg / ml(0.0971±0.0035毫克/毫升)]和大肠杆菌(麦克风:47.5±4.2µg / ml(0.0475±0.0042毫克/毫升);MBC: 105.5±6.8µg/ml(0.1055±0.0068 mg/ml)],具有杀菌作用模式(MBC/MIC≤4)。值得注意的是,MgO-NPs恢复了耐药菌株对β-内酰胺类抗生素(头孢他啶和青霉素)的敏感性,显示出协同效应。MgO-NPs在10 mg/ml浓度下对白色念珠菌(17.3±0.7 mm)和黑曲霉(14.4±0.8 mm)的抑菌活性也有所提高。植物化学分析表明,草藻多糖具有溶剂依赖性的生物活性成分,其水萃取物富含单宁/酚类物质,甲醇萃取物富含黄酮类/萜类物质。这是第一个证实由草芹提取物合成的MgO-NPs恢复抗生素敏感性的报道。
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引用次数: 0
Genomic Characterization of Multidrug-Resistant Myroides Odoratimimus from Pneumonic Piglets: A One Health Threat. 肺炎仔猪多药耐药多味密蝇的基因组特征:一种健康威胁。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-09 DOI: 10.1007/s00284-026-04752-1
Binod Kumar Choudhary, Mamta Choudhary, Gyan Prakash Rai, Sukhadeo B Barbuddhe, Asheesh Shanker

Myroides odoratimimus is an emerging opportunistic pathogen increasingly implicated in infections across human and animal populations. We previously reported the first outbreak of pneumonia in post-weaning piglets associated with M. odoratimimus, marking a significant shift in its recognized host range. The affected swine herd exhibited co-infection with Porcine Circovirus types 2 and 3 (PCV2 and PCV3), likely contributing to proliferative dermatitis and nephropathy syndrome (PDNS), reproductive abnormalities and immunosuppression. This study presents the genomic characterization of a multidrug-resistant strain (M. odoratimimus pgdne) isolated during the outbreak. Whole-genome sequencing revealed multiple antimicrobial resistance determinants-including the chromosomally encoded blaMUS-1 metallo-β-lactamase-and several virulence-associated factors. Genotype-phenotype correlation demonstrated strong concordance. Phylogenetic analysis (distance method, 1,000 bootstrap replicates) showed close relatedness with human isolates, suggesting zoonotic potential. These findings underscore the pathogenic capacity of M. odoratimimus in immunocompromised animal hosts and highlight its relevance to public health and thereby reinforces the need for integrated One Health-based surveillance and control strategies targeting emerging multidrug-resistant pathogens.

芳香密蝇是一种新兴的机会性病原体,与人类和动物种群的感染关系日益密切。我们之前报道了与odoratimimus相关的断奶仔猪肺炎的首次暴发,标志着其已知宿主范围的重大转变。受影响的猪群表现出猪圆环病毒2型和3型(PCV2和PCV3)的共同感染,可能导致增殖性皮炎和肾病综合征(PDNS)、生殖异常和免疫抑制。本研究介绍了在暴发期间分离的多药耐药菌株(多药耐药杆菌pgdne)的基因组特征。全基因组测序揭示了多种抗菌素耐药性决定因素,包括染色体编码的blaMUS-1金属β-内酰胺酶和几种毒力相关因素。基因型-表型相关性显示出较强的一致性。系统发育分析(距离法,1000次bootstrap重复)显示与人类分离株密切相关,提示人畜共患的可能性。这些发现强调了多味螨在免疫功能低下的动物宿主中的致病能力,并强调了其与公共卫生的相关性,从而加强了针对新出现的多药耐药病原体的基于“一个健康”的综合监测和控制战略的必要性。
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引用次数: 0
Bernardetia aquimarina sp. nov., Isolated from Sargasso Samples from the Yellow Sea. 黄海马尾藻分离株的研究。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-09 DOI: 10.1007/s00284-026-04744-1
Hai-Xia Zhu, Shi-Ning Cai, Ning-Hua Liu, Zhi-Gang Tang, Xue-Yun Geng, Xiao-Yan Song, Mei-Ling Sun, Xi-Ying Zhang
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引用次数: 0
Advancing Aquaculture Health and Efficiency: A Comprehensive Update on Synbiotic Applications in Fish and Shellfish Farming. 促进水产养殖健康和效率:鱼类和贝类养殖中合成生物应用的全面更新。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-07 DOI: 10.1007/s00284-025-04662-8
Srirengaraj Vijayaram, Hary Razafindralambo, Mahendran Karthikeyan, Einar Ringø, Arunachalam Krishna Prakash, Yun-Zhang Sun
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引用次数: 0
Developing Effective Bioinoculant and Engineering Plant Microbiome for Climate Resilient Agriculture: Lessons Learned and Future Roadmap. 为气候适应型农业开发有效的生物接种剂和工程植物微生物组:经验教训和未来路线图。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-07 DOI: 10.1007/s00284-025-04709-w
Sampurna Kashyap, Pranaba Nanda Bhattacharyya, Niraj Agarwala

Ensuring plant resilience is crucial for maintaining global food security amidst a changing climate. Leveraging the multitude of microorganisms in different environmental conditions appears to be a promising and sustainable approach to boosting agricultural productivity. However, understanding the legacy of microbial bioinoculants in agroecosystems remains a challenging issue, thereby hampering their widespread applicability and acceptance. This review offers an in-depth insight into the intricacies of designing effective bioinoculants, orchestrated by an understanding of the ecological contexts that drive their success. Furthermore, this article emphasizes the importance of adopting a holistic approach to designing effective bioinoculants, thereby enhancing their application in agriculture.

确保植物恢复力对于在气候变化中维持全球粮食安全至关重要。利用不同环境条件下的大量微生物似乎是提高农业生产力的一种有前途和可持续的方法。然而,了解微生物生物接种剂在农业生态系统中的遗留问题仍然是一个具有挑战性的问题,从而阻碍了它们的广泛应用和接受。这篇综述提供了一个深入了解设计有效的生物接种剂的复杂性,通过对推动其成功的生态环境的理解。此外,本文还强调了采用整体方法设计有效的生物接种剂的重要性,从而提高其在农业中的应用。
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引用次数: 0
Thymoquinone from Lichen Dirinaria frostii (Tuck.): A New Promising Antimicrobial Compound. 霜地衣中的百里醌:一种有前景的抗菌新化合物。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-07 DOI: 10.1007/s00284-026-04746-z
Shubham Pradhan, Satyabrata Dash, Bijayananda Sahoo, Sabyasachy Parida, Dalip Kumar Upreti, Biswajit Rath

The present study reports the presence of thymoquinone (TQ), a promising benzoquinone compound, in the lichen Dirinaria frostii (strain DF_MSCBU, NCBI-accession no. PP955960), collected from Similipal National Park, India. The extract of D. frostii was subjected to GCMS analysis and detected the presence of thymoquinone. Further, purification of the TQ fraction was carried out using HPLC against a standard thymoquinone reference. FTIR analysis identified the key functional groups. In addition, Nuclear Magnetic Resonance (¹H NMR and ¹³C NMR) spectroscopy was performed to determine the structure and composition of the molecule. The purified TQ was then used for antibacterial assays against pathogenic bacteria Staphylococcus aureus, Bacillus subtilis, Escherichia coli, and Vibrio cholerae following the MIC method showed pathogen inhibition at different incubation time, of both Gram +ve and Gram -ve bacteria. Thymoquinone showed significant bactericidal activity compared to the standard antibiotics azithromycin, streptomycin, and erythromycin in a dose-dependent manner. This study demonstrates occurrence of thymoquinone from D. frostii as a novel finding and opens new possibilities for its therapeutic applications in the future.

摘要本研究报道了一种很有前途的苯醌类化合物——百里醌(thymoquinone, TQ)在苔藓菌frostii (DF_MSCBU, NCBI-accession no. 1)中存在。PP955960),采自印度Similipal国家公园。采用气相色谱分析方法,检测了百里醌的存在。此外,采用高效液相色谱法对标准百里醌进行纯化。FTIR分析确定了关键的官能团。此外,通过核磁共振(¹H NMR和¹³C NMR)谱分析确定了分子的结构和组成。采用MIC法对金黄色葡萄球菌、枯草芽孢杆菌、大肠杆菌、霍乱弧菌等病原菌进行抑菌试验,结果表明,在不同的培养时间,对革兰氏+ve和革兰氏-ve菌均有抑制作用。与标准抗生素阿奇霉素、链霉素和红霉素相比,百里醌显示出显著的杀菌活性,且呈剂量依赖性。本研究证实了百里醌的出现是一项新的发现,为其在未来的治疗应用开辟了新的可能性。
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引用次数: 0
Synergistic Antibacterial Activity of Quercetin-Functionalized Magnetic Nanoparticles Combined with Ciprofloxacin on Pathogenic Pseudomonas Aeruginosa Via Targeting Virulence, Efflux Pump, and Adhesion-Associated Genes and Molecular Docking Analysis. 槲皮素功能化磁性纳米颗粒联合环丙沙星通过靶向毒力、外排泵和粘附相关基因及分子对接分析对致病性铜绿假单胞菌的协同抑菌活性
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-06 DOI: 10.1007/s00284-026-04718-3
Farahnaz Harouni Navroudi, Reyhaneh Kouchakinejad, Ali Bazri Chenijani, Shiva Kouhsari Chalehsarayi, Fatemeh Najari, Hanieh Bejari, Hossein Zahmatkesh, Najmeh Ranji, Behnam Rasti, Mohammad Nikpassand, Mahdi Shahriarinour

Biofilm formation and the activity of efflux pumps are major contributors to antibiotic resistance in clinical strains of Pseudomonas aeruginosa and significantly enhance the pathogenicity of this bacterium. Functionalization of metal nanoparticles with plant-derived flavonoids, particularly when combined with conventional antibiotics, represents a promising strategy for overcoming antimicrobial resistance. In the present study, we investigated the synergistic inhibitory effects of quercetin-functionalized magnetic nanoparticles (Fe3O4@SiPr@Quercetin NPs) in combination with ciprofloxacin against ciprofloxacin-resistant clinical isolates of P. aeruginosa. Ciprofloxacin-resistant isolates were collected from hospitals and diagnostic laboratories in Tehran Province, Iran. The synthesized nanoparticles exhibited a spherical morphology with an average diameter of 165 nm. Synergistic antibacterial activity of the functionalized nanoparticles combined with ciprofloxacin was evaluated using the checkerboard assay. The most pronounced reduction in biofilm formation, was observed in strains treated with the nanoparticle-ciprofloxacin combination, with inhibition rates ranging from 18.9 ± 1.13% to 90.05 ± 5.72%. Time-kill curve analysis further demonstrated that Fe3O4@SiPr@Quercetin in combination with ciprofloxacin produced a more rapid bactericidal effect, reducing bacterial counts to 5.87-4.72 log CFU/mL after 8 h of treatment. Moreover, quantitative real-time PCR (qPCR) analysis revealed significant downregulation of genes associated with efflux pumps (mexA, mexB, oprM, mexX, and mexY) and virulence factors (pelA, algD, pslA, and exoS) in the clinical isolate treated with ½ minimum inhibitory concentration (MIC) of Fe3O4@SiPr@Quercetin in combination with ½ MIC of ciprofloxacin, compared with treatment with ciprofloxacin alone. Collectively, these findings indicate that quercetin-functionalized magnetic nanoparticles may serve as a promising adjunctive therapeutic strategy for combating ciprofloxacin-resistant P. aeruginosa infections.

生物膜的形成和外排泵的活性是铜绿假单胞菌临床菌株耐药的主要因素,并显著增强了该细菌的致病性。金属纳米颗粒与植物源性黄酮类化合物的功能化,特别是与传统抗生素联合使用时,代表了克服抗菌素耐药性的有希望的策略。在本研究中,我们研究了槲皮素功能化磁性纳米颗粒(Fe3O4@SiPr@Quercetin NPs)联合环丙沙星对耐环丙沙星临床分离株铜绿假单胞菌的协同抑制作用。从伊朗德黑兰省的医院和诊断实验室收集了耐环丙沙星分离株。合成的纳米颗粒呈球形,平均直径为165 nm。采用棋盘法评价功能化纳米颗粒与环丙沙星的协同抑菌活性。纳米颗粒-环丙沙星联合处理的菌株对生物膜的抑制率为18.9±1.13% ~ 90.05±5.72%。时间杀伤曲线分析进一步表明Fe3O4@SiPr@槲皮素联合环丙沙星杀菌效果更快,8 h后细菌计数降至5.87-4.72 log CFU/mL。此外,定量实时PCR (qPCR)分析显示,与单独使用环丙沙星治疗相比,在1 / 2最低抑制浓度(MIC) Fe3O4@SiPr@Quercetin联合1 / 2 MIC环丙沙星治疗的临床分离物中,与外排泵(mexA, mexB, oprM, mexX和mexY)和毒力因子(pelA, algD, pslA和exoS)相关的基因显著下调。总的来说,这些发现表明槲皮素功能化的磁性纳米颗粒可能作为对抗环丙沙星耐药铜绿假单胞菌感染的一种有希望的辅助治疗策略。
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引用次数: 0
Postbiotics from Lactobacillus helveticus Attenuate Enterotoxigenic Bacteroides fragilis-Induced Inflammation and NF-κB Activation in Colorectal Epithelial Cells. helveticus乳杆菌的后生制剂减轻肠毒素脆弱拟杆菌诱导的炎症和NF-κB在结直肠上皮细胞中的激活。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-06 DOI: 10.1007/s00284-025-04643-x
Zahra Tayebi, Mina Owrang, Sama Sadat Ershadi, Hamidreza Houri

Colorectal cancer (CRC), the third most common malignancy worldwide, arises from a complex interplay of genetic, environmental, and microbial factors. Enterotoxigenic Bacteroides fragilis (ETBF) promotes CRC progression by secreting metalloprotease toxins, such as fragilysin (B. fragilis toxin, BFT), which disrupt intestinal epithelial barrier integrity, activate proinflammatory pathways (e.g., NF-κB), and drive carcinogenesis. Conversely, probiotics such as Lactobacillus helveticus may help attenuate inflammation and tumorigenesis. This study assessed the anti-inflammatory effects of heat-killed L. helveticus and its cell-free supernatant (CFS) on ETBF-induced inflammation in Caco-2 human intestinal epithelial cells. Cells were exposed to purified BFT (1 ng/mL) to induce inflammation, then treated with heat-killed L. helveticus (0.5 mg/mL) or CFS (0.5 mg/mL) for 48 h. Gene expression of cytokines (IL-1β, IL-8, IL-10) and NF-κB was quantified via quantitative reverse transcription polymerase chain reaction (qRT-PCR). ETBF significantly upregulated NF-κB (4-fold; p = 0.0007) and induced morphological disruptions. Treatments upregulated anti-inflammatory IL-10 (2-fold and 5-fold, respectively; p = 0.002 each) and reduced proinflammatory IL-8 (p = 0.005 and p = 0.002), with no change in IL-1β (p > 0.05). Treated cells showed restored morphology, indicating reduced inflammation and cytotoxicity. These findings illustrate the potential of non-viable L. helveticus to modulate inflammation, possibly via NF-κB inhibition and postbiotic metabolites. Future research should investigate strain-specific mechanisms, in vivo efficacy, and expanded cytokine profiles to optimize interventions.

结直肠癌(CRC)是世界上第三大最常见的恶性肿瘤,是遗传、环境和微生物因素复杂相互作用的结果。产肠毒素的脆弱拟杆菌(ETBF)通过分泌金属蛋白酶毒素如脆性溶素(B. fragilis toxin, BFT)促进结直肠癌的进展,这些毒素破坏肠上皮屏障的完整性,激活促炎途径(如NF-κB),并驱动癌变。相反,益生菌如helveticus乳杆菌可能有助于减轻炎症和肿瘤的发生。本研究评估热杀L. helveticus及其无细胞上清(CFS)对etbf诱导的Caco-2人肠上皮细胞炎症的抗炎作用。用纯化的BFT (1 ng/mL)诱导细胞炎症,然后用热杀L. helveticus (0.5 mg/mL)或CFS (0.5 mg/mL)处理48 h,通过定量逆转录聚合酶链反应(qRT-PCR)测定细胞因子(IL-1β、IL-8、IL-10)和NF-κB的基因表达。ETBF显著上调NF-κB(4倍;p = 0.0007)并诱导形态学破坏。抗炎IL-10上调(分别为2倍和5倍,p = 0.002),促炎IL-8降低(p = 0.005和p = 0.002), IL-1β无变化(p < 0.05)。处理后的细胞形态恢复,表明炎症和细胞毒性降低。这些发现表明,非活的helveticus可能通过抑制NF-κB和生物后代谢产物来调节炎症。未来的研究应探讨菌株特异性机制、体内疗效和扩大细胞因子谱以优化干预措施。
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引用次数: 0
Planococcus Daihaiensis sp. nov. Isolated from the Lake Water in Daihai. 代海Planococcus Daihaiensis sp. 11 .从代海湖水中分离。
IF 2.6 3区 生物学 Q3 MICROBIOLOGY Pub Date : 2026-02-06 DOI: 10.1007/s00284-026-04737-0
Gen Che, Kai Jiang, Chunling Cao, Lijia Ye, Yanxing Wang, Yu Hong

A novel aerobic, Gram-stain-positive, non-motile, non-spore-forming, short rod-shaped strain X10-3T, was isolated from Daihai Lake, Inner Mongolia, China. The strain formed circular, smooth, transparent, orange-colored colonies with convex elevation and entire margins, which measured approximately 1.0-4.0 mm in diameter after 48 h of incubation on Luria-Bertani agar at 32 °C. The strain was able to grow at pH levels between 6.5 and 9.0 (optimal at 7.5-8.0), temperatures from 4 to 40 °C (optimal at 37 °C), and in 0-13% (optimal at 2-3%, w/v) NaCl. The complete genome of strain X10-3T comprises 3,244,194 bp with a DNA G + C content of 45.9%. Phylogenetic analysis revealed the closest relationship to members of the genus Planococcus, showing 16S rRNA gene sequence similarities of 99.2% with P. salinarum DSM 23820T, 98.8% with P. wigleyi Sa1BUA13T, 98.6% with P. koreense JG07T, and 98.6% with P. halotolerans SCU63T. The average nucleotide identity between strain X10-3T and the species within the genus Planococcus fell below the species delineation thresholds of 95%, and the digital DNA-DNA hybridization values were lower than 70%. Chemotaxonomic analysis revealed that the predominant cellular fatty acids of strain X10-3T were anteiso-C15:0 and C16:1 ω7c alcohol. The primary cellular polar lipids included phosphatidylethanolamine, phosphatidylglycerol, and diphosphatidylglycerol, while the predominant isoprenoid quinones were menaquinone-8 and menaquinone-7. Based on these comprehensive analyses, strain X10-3T represents a new species of the genus Planococcus, for which the name Planococcus daihaiensis sp. nov. is proposed. The type strain is X10-3T (= CGMCC 1.60163T = KCTC 43688T).

从内蒙古代海分离到一株革兰氏染色阳性、无运动、不产孢子的短棒状需氧菌株X10-3T。菌株在32℃的Luria-Bertani琼脂上孵育48 h后,形成圆形、光滑、透明、橙色、凸高和整个边缘的菌落,直径约为1.0-4.0 mm。菌株能够在pH为6.5 ~ 9.0(7.5 ~ 8.0),温度为4 ~ 40℃(37℃),NaCl为0 ~ 13% (2 ~ 3%,w/v)的条件下生长。菌株X10-3T全基因组全长3244194 bp, DNA G + C含量为45.9%。系统发育分析显示,该菌株与Planococcus属成员的16S rRNA基因序列相似性为99.2%,与P. salinarum DSM 23820T相似度为98.8%,与P. wigleyi Sa1BUA13T相似度为98.8%,与P. koreense JG07T相似度为98.6%,与P. halotolerans SCU63T相似度为98.6%。菌株X10-3T与Planococcus属内物种之间的平均核苷酸一致性低于95%的物种划分阈值,数字DNA-DNA杂交值低于70%。化学分类分析表明,菌株X10-3T的主要细胞脂肪酸为ω7c醇和ω7c醇。主要的细胞极性脂质包括磷脂酰乙醇胺、磷脂酰甘油和二磷脂酰甘油,而主要的类异戊二烯醌是甲基萘醌-8和甲基萘醌-7。基于这些综合分析,菌株X10-3T代表了Planococcus属的一个新种,建议将其命名为Planococcus daihaiensis sp. 11。型应变为X10-3T (= CGMCC 1.60163T = KCTC 43688T)。
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引用次数: 0
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Current Microbiology
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