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Isolation, expression and characterization of a novel thermo-acid/alkali-stable GH10 xylanase BsXynA from Bacillus safensis L7 and its potential for xylooligosaccharide production and animal feed saccharification 一种新型热酸/碱稳定型GH10木聚糖酶BsXynA的分离、表达和鉴定及其在低聚木糖生产和动物饲料糖化中的应用前景
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-13 DOI: 10.1016/j.enzmictec.2025.110735
Ting Zhang, Zhong Cheng, YuMei Fan, YuXin Lan, HuiLan Shu, JinHua Chen, FengCheng Jin, LiYuan Qin, DongPing Feng
Xylanases have wide applications in agro-industrial processes. This study reports the discovery and characterization of a novel thermo-acid/alkali-stable GH10 xylanase (BsXynA) from Bacillus safensis L7. The xylanase gene (BsxynA) was cloned and expressed in Escherichia coli BL21 (DE3), yielding a protein of approximately 64 kDa. BsXynA exhibited optimal activity (17.33 U/mg) on beechwood xylan at pH 6.0 and 60°C. Moreover, BsXynA exhibited remarkable thermo-acid/alkali stability, retaining over 60 % activity at pH 5.0–8.0 after 60 min at 60°C and over 80 % activity after 14 days at 4°C within pH 6.0–9.0. Additionally, the enzyme tolerated 50°C and various chemicals, with a half-life of over 16 days. It was activated by K⁺, Na⁺, Ca²⁺, Ba²⁺, and Mg²⁺ ions but inhibited by Zn²⁺, Cu²⁺, and SDS. BsXynA hydrolyzed various xylans but not glucose-based polysaccharides. Km, Vmax, kcat, and kcat/Km for beechwood xylan hydrolysis were found to be 6.61 mg/mL, 24.24 µmol·min−1·mg−1, 15.71 s−1, and 2.38 mL·s−1·mg−1 respectively. Thin-layer chromatography (TLC) analysis showed that BsXynA is an endo-type xylanase, which hydrolyzes beechwood xylan to produce mainly xylobiose (X2) and xylotetraose (X4), with no xylose detected. Furthermore, BsXynA improved animal feed saccharification, making it a promising biocatalyst for biotechnological applications.
木聚糖酶在农工生产过程中有着广泛的应用。本研究报道了一种新的热酸/碱稳定木聚糖酶(BsXynA)的发现和鉴定。在大肠杆菌BL21 (DE3)中克隆并表达了木聚糖酶基因(bxyna),得到了一个约64 kDa的蛋白。在pH 6.0和60℃条件下,BsXynA对山毛榉木聚糖的活性为17.33 U/mg。此外,BsXynA表现出显著的热酸/碱稳定性,在pH 5.0-8.0下,在60°C下60 min后,活性保持在60% %以上,在pH 6.0-9.0下,在4°C下14 d后活性保持在80% %以上。此外,该酶耐受50°C和各种化学物质,半衰期超过16天。它被K +、Na +、Ca 2 +、Ba 2 +和Mg 2 +激活,但被Zn 2 +、Cu 2 +和SDS抑制。BsXynA能水解多种木聚糖,但不能水解葡萄糖基多糖。山毛榉木聚糖水解的Km、Vmax、kcat和kcat/Km分别为6.61 mg/mL、24.24µmol·min−1·mg−1、15.71 s−1和2.38 mL·s−1·mg−1。薄层色谱(TLC)分析表明,bxyna是一种内型木聚糖酶,主要水解山毛榉木聚糖生成木糖二糖(X2)和木糖四糖(X4),未检测到木糖。此外,BsXynA改善了动物饲料的糖化,使其成为一种有前景的生物技术应用的生物催化剂。
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引用次数: 0
Ethyl lactate synthesis in organic media using a magnetic supported CALB 磁性负载CALB在有机介质中合成乳酸乙酯
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-12 DOI: 10.1016/j.enzmictec.2025.110732
Paula Nicolás , Verónica L. Lassalle , María Luján Ferreira
The growing demand for sustainable chemical processes has spurred interest in enzymatic synthesis, particularly for valuable compounds like ethyl lactate. Traditional chemical methods often suffer from drawbacks, highlighting the potential of enzymatic catalysis using immobilized lipases. This study evaluated the performance of magnetic biocatalyst, prepared by immobilizing Candida antarctica lipase B (CALB) on magnetic nanoparticles, for the batch synthesis of ethyl lactate in hexane. Initial experiments using free CALB and commercial Novozym435 proved problematic due to enzyme denaturation and support instability, respectively. While titration-based methods for monitoring the reaction were found to be unreliable due to lactic acid's complex behavior in the reaction medium, titratable acidity reduction suggested an optimal lactic acid to ethanol molar ratio of 1/10. Subsequent HPLC analysis revealed that the magnetic biocatalyst maintained a consistent conversion (%) at higher lactic acid concentrations (up to 17 mg/mL at 45°C, with conversion above 60 % in 5 h), demonstrating its potential for processing larger amounts of substrate. The initial reaction rate was estimated to be 3.8 mM/h. The study also identified experimental challenges in accurate lactic acid quantification and potential catalyst degradation. In conclusion, the magnetic CALB biocatalyst shows promising activity and stability for ethyl lactate synthesis, especially at higher substrate loads, paving the way for further optimization and application in sustainable production.
对可持续化学过程日益增长的需求激发了人们对酶合成的兴趣,特别是对有价值的化合物,如乳酸乙酯。传统的化学方法往往遭受的缺点,突出潜力的酶催化使用固定化脂肪酶。研究了磁性纳米颗粒固定化南极念珠菌脂肪酶B (CALB)制备的磁性生物催化剂在正己烷中批量合成乳酸乙酯的性能。使用游离CALB和商用Novozym435进行的初步实验分别证明由于酶变性和支持不稳定性而存在问题。由于乳酸在反应介质中的复杂行为,基于滴定的反应监测方法被认为是不可靠的,可滴定的酸度还原表明乳酸与乙醇的最佳摩尔比为1/10。随后的HPLC分析显示,磁性生物催化剂在较高的乳酸浓度下保持一致的转化率(%)(在45°C下高达17 mg/mL,转化率在5 h内超过60 %),表明其处理大量底物的潜力。初始反应速率估计为3.8 mM/h。该研究还确定了准确乳酸定量和潜在催化剂降解的实验挑战。综上所述,磁性CALB生物催化剂在乳酸乙酯合成中表现出良好的活性和稳定性,特别是在高底物负荷下,为进一步优化和可持续生产应用铺平了道路。
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引用次数: 0
Elucidation of biochemical attributes and enzymatic activity of agarase from Saccharophagus degradans 2–40 食糖菌降解2-40琼脂酶的生化特性及酶活性的研究
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-08 DOI: 10.1016/j.enzmictec.2025.110733
Anoth Maharjan , Beom Soo Kim
Saccharophagus degradans 2–40 exhibits agarolytic activity, effectively degrading agar into galactose. Both endo- and exo-agarase, as well as neoagarobiose hydrolase (NABH), play important roles in agar saccharification for the production of monosugars. This study characterizes a novel agarase enzyme from S. degradans 2–40, a marine bacterium renowned for its exceptional polysaccharide-degrading capabilities. We hypothesized that this strain would harbor an efficient and robust agarase with desirable properties for saccharification processes. Following isolation and purification, the agarase underwent biochemical analysis, revealing optimal activity at moderate temperatures and a broad pH range. Furthermore, the fusion of Aga50D with NABH enhanced the catalytic efficiency from 1.873 ± 0.22 (mg/mL)−1s−1 to 4.826 ± 0.19 (mg/mL)−1s−1. In contrast to chemical hydrolysis, enzymatic treatment using agarase offers a more selective, eco-friendly, and high-yield alternative, minimizing by-product formation and preserving functional sugar moieties. The enzyme's ability to produce neoagarobiose (NA2) as its primary product, without any intermediates, makes it an attractive biocatalyst for the production of bioactive oligosaccharides. This study highlights the potential of S. degradans 2–40 as a valuable source of enzymes for industrial biotechnology applications, particularly in the sustainable conversion of marine biomass into high-value products.
食糖降解菌2-40具有降解琼脂的活性,能有效地将琼脂降解为半乳糖。内、外琼脂酶以及新琼脂糖水解酶(NABH)在琼脂糖化生产单糖过程中起着重要作用。本研究表征了一种来自S.降解2-40的新型琼脂酶,这是一种以其特殊的多糖降解能力而闻名的海洋细菌。我们假设,这种菌株将有一个有效的和强大的琼脂酶具有理想的性质,糖化过程。分离纯化后,对该琼脂酶进行了生化分析,结果表明该酶在中等温度和较宽的pH范围内具有最佳活性。此外,Aga50D与NABH的融合使催化效率从1.873 ± 0.22 (mg/mL)−1s−1提高到4.826 ± 0.19 (mg/mL)−1s−1。与化学水解相比,使用琼脂酶的酶处理提供了一种更具选择性,环保和高产的替代方法,最大限度地减少了副产物的形成并保留了功能糖部分。该酶的主要产物是新琼脂糖(NA2),不需要任何中间体,这使其成为生产生物活性低聚糖的有吸引力的生物催化剂。这项研究强调了S.降解2-40作为工业生物技术应用的有价值的酶来源的潜力,特别是在将海洋生物质可持续转化为高价值产品方面。
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引用次数: 0
NADPH regeneration for efficient biosynthesis of indigo by flavin-containing monooxygenase and formate dehydrogenase 含黄素单加氧酶和甲酸脱氢酶对靛蓝高效生物合成的NADPH再生
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-05 DOI: 10.1016/j.enzmictec.2025.110731
Yingying Zhu , Dawei Ni , Zeyu Li , Zhebin Hao , Liang Wang , Wanmeng Mu
Indigo is an important blue pigment widely used in textile, food, and medicine industries. Biological production of indigo attracts increasing attention recently. Cell factory production of indigo encounters the problem of the toxicity of the precursor indole. Enzymatic production is the alternative biological approach, however, NADPH regeneration should be solved. In this study, flavin-containing monooxygenase from Methylophaga aminisulfidivorans was used for enzymatic production of indigo from indole and formate dehydrogenase from Pseudomonas sp. 101 was co-expressed for NADPH regeneration. Indigo production was enhanced by combination of molecular modification, promoter engineering, and translation initiation region engineering. Finally, 0.183 g/L of indigo was produced from 0.5 g/L of indole and 0.5 mM of sodium formate, with the conversion ratio of 32.5 %. This study demonstrates a feasible and effective strategy for enzymatic production of indigo.
靛蓝是一种重要的蓝色颜料,广泛用于纺织、食品、医药等行业。近年来,靛蓝的生物生产越来越受到人们的关注。细胞工厂生产靛蓝遇到的问题是前体吲哚的毒性。酶促生产是替代的生物途径,但NADPH再生应解决。本研究利用甲基噬菌(Methylophaga aminisulfidivorans)的含黄素单加氧酶从吲哚中产生靛蓝,并利用假单胞菌(Pseudomonas sp. 101)的甲酸脱氢酶进行NADPH再生。通过分子修饰、启动子工程和翻译起始区工程的结合,提高了靛蓝的产量。最后,以0.5 g/L吲哚和0.5 mM甲酸钠为原料,可制得0.183 g/L靛蓝,转化率为32.5 %。本研究证明了一种可行和有效的酶促生产靛蓝的策略。
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引用次数: 0
Preparation of ginsenoside Rd using a novel α-L-arabinofuranosidase BpAbf51A from Bacillus pumilus 利用矮芽孢杆菌α- l -阿拉伯糖糠糖苷酶BpAbf51A制备人参皂苷Rd
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-04 DOI: 10.1016/j.enzmictec.2025.110729
Yuzhu Shen , Yue Yang , Yudi Song , Yakun Shan , Jiaxin Liu , Yanbo Hu
α-L-Arabinofuranosidase has been widely used in the fields of enhancing pasta production quality, fruit juice clarification, enhancing wine flavor, increasing feed utilization rate, and developing special drug ingredients, playing a pivotal role in the food processing, feed, and medical care industries. In this study, a novel α-L-arabinofuranosidase (BpAbf51A), belonging to glycoside hydrolase family 51 (GH51), was cloned from the Bacillus pumilus strain 145 and expressed in Escherichia coli BL21 (DE3), with a molecular weight of approximately 56.0 kDa. BpAbf51A comprises two characteristic domains of the GH51 family: an N-terminal (β/α)8-barrel catalytic domain and a C-terminal jelly-roll domain. The enzyme exhibits high substrate specificity for p-nitrophenyl-α-L-arabinofuranoside and demonstrates optimal catalytic activity at 50°C and pH 8.0, suggesting its potential for industrial applications under moderate conditions. Notably, BpAbf51A specifically hydrolyzes the arabinofuranosyl moiety at the C-20 position of ginsenoside Rc to produce ginsenoside Rd. Molecular docking and two-dimensional interaction diagrams further revealed that the key amino acid residues, Ser213 and Asn214 of BpAbf51A, form strong hydrogen bonds with ginsenoside Rc. In this study, a novel α-L-arabinofuranosidase, BpAbf51A, has demonstrated significant potential for industrial applications in the production of rare saponins and other glycoside-based natural products, providing new research directions for the development of efficient biocatalysts.
α- l -阿拉伯糖葡糖苷酶广泛应用于提高面食品质、澄清果汁、增强葡萄酒风味、提高饲料利用率、开发特殊药物成分等领域,在食品加工、饲料、医疗保健等行业中发挥着举足轻重的作用。本研究从短小芽孢杆菌145菌株中克隆出一种新的α- l -阿拉伯糖葡糖苷酶(BpAbf51A),属于糖苷水解酶51家族(GH51),在大肠杆菌BL21 (DE3)中表达,分子量约为56.0 kDa。BpAbf51A包含GH51家族的两个特征结构域:n端(β/α)8桶催化结构域和c端果冻状结构域。该酶对对硝基苯-α- l-阿拉伯糖醛酸苷具有较高的底物特异性,在50°C和pH 8.0条件下具有最佳的催化活性,表明其在中等条件下具有工业应用潜力。值得注意的是,BpAbf51A特异性水解了人参皂苷Rc C-20位的阿拉伯糖糠基片段,生成人参皂苷Rd。分子对接和二维相互作用图进一步揭示了BpAbf51A的关键氨基酸残基Ser213和Asn214与人参皂苷Rc形成了强氢键。在本研究中,一种新型α- l -阿拉伯糖醛酸苷酶BpAbf51A在稀有皂苷和其他糖苷类天然产物的生产中显示出巨大的工业应用潜力,为高效生物催化剂的开发提供了新的研究方向。
{"title":"Preparation of ginsenoside Rd using a novel α-L-arabinofuranosidase BpAbf51A from Bacillus pumilus","authors":"Yuzhu Shen ,&nbsp;Yue Yang ,&nbsp;Yudi Song ,&nbsp;Yakun Shan ,&nbsp;Jiaxin Liu ,&nbsp;Yanbo Hu","doi":"10.1016/j.enzmictec.2025.110729","DOIUrl":"10.1016/j.enzmictec.2025.110729","url":null,"abstract":"<div><div>α-L-Arabinofuranosidase has been widely used in the fields of enhancing pasta production quality, fruit juice clarification, enhancing wine flavor, increasing feed utilization rate, and developing special drug ingredients, playing a pivotal role in the food processing, feed, and medical care industries. In this study, a novel α-L-arabinofuranosidase (BpAbf51A), belonging to glycoside hydrolase family 51 (GH51), was cloned from the <em>Bacillus pumilus</em> strain 145 and expressed in <em>Escherichia coli</em> BL21 (DE3), with a molecular weight of approximately 56.0 kDa. BpAbf51A comprises two characteristic domains of the GH51 family: an N-terminal (β/α)<sub>8</sub>-barrel catalytic domain and a C-terminal jelly-roll domain. The enzyme exhibits high substrate specificity for <em>p</em>-nitrophenyl-α-L-arabinofuranoside and demonstrates optimal catalytic activity at 50°C and pH 8.0, suggesting its potential for industrial applications under moderate conditions. Notably, BpAbf51A specifically hydrolyzes the arabinofuranosyl moiety at the C-20 position of ginsenoside Rc to produce ginsenoside Rd. Molecular docking and two-dimensional interaction diagrams further revealed that the key amino acid residues, Ser213 and Asn214 of BpAbf51A, form strong hydrogen bonds with ginsenoside Rc. In this study, a novel α-L-arabinofuranosidase, BpAbf51A, has demonstrated significant potential for industrial applications in the production of rare saponins and other glycoside-based natural products, providing new research directions for the development of efficient biocatalysts.</div></div>","PeriodicalId":11770,"journal":{"name":"Enzyme and Microbial Technology","volume":"191 ","pages":"Article 110729"},"PeriodicalIF":3.7,"publicationDate":"2025-08-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144770768","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
DNA box-assisted T7 transcription techniques combined with Cas13a for detection of the influenza A (H1N1) virus DNA盒辅助T7转录技术联合Cas13a检测甲型H1N1流感病毒
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-08-02 DOI: 10.1016/j.enzmictec.2025.110728
Mengyuan Zhou , He Sun , Shengjun Bu , Yao Xu , Hongyu Zhou , Ziqin Song , Zebin Zhang , Zhuo Hao , Songling Yu , Jiayu Wan , Feng Tang
The influenza A (H1N1) virus continues to undergo mutations, posing a serious threat to public health. In this study, an innovative system was developed using a transcriptional isothermal amplification scheme combined with a DNA box for detection of H1N1 RNA. The split T7 promoter was assembled on four edges of the hexahedral DNA box to form two target-capturing robotic arms. Transcribed ssRNA was accurately recognized by the Cas13a system and used the trans-cleavage activity to release a fluorescent signal. As compared to the traditional split T7 technique, the novel DNA box greatly improved the reaction rate and biological stability in complex organisms. The sensor platform strategy enabled stable and accurate detection of H1N1 RNA with detection limits as low as the fM level. In general, the proposed system provided a good sensing tool for virus diagnosis and monitoring with great potential in environmental and public health applications.
甲型H1N1流感病毒继续发生变异,对公众健康构成严重威胁。在这项研究中,我们开发了一种利用转录等温扩增方案结合DNA盒检测H1N1 RNA的创新系统。将分裂的T7启动子组装在六面体DNA盒的四个边缘上,形成两个捕获靶标的机械臂。转录后的ssRNA被Cas13a系统准确识别,并利用其反式裂解活性释放荧光信号。与传统的T7分裂技术相比,新型DNA盒在复杂生物中的反应速度和生物稳定性大大提高。该传感器平台策略能够稳定、准确地检测H1N1 RNA,检测限低至fM水平。总体而言,该系统为病毒诊断和监测提供了良好的传感工具,在环境和公共卫生领域具有很大的应用潜力。
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引用次数: 0
Cell surface display of CAL-B in Escherichia coli using the split GFP system 利用分裂式GFP系统显示CAL-B在大肠杆菌中的细胞表面
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-29 DOI: 10.1016/j.enzmictec.2025.110726
Jisoo Lee, Jong-In Won
Bacterial surface display systems enable the immobilization of proteins on the outer membrane for applications such as peptide library screening, biosensing, and bioadsorption. However, the display efficiency of large proteins remains limited, primarily due to challenges in translocating bulky polypeptides across the membrane. To address this, a split Green Fluorescent Protein (split GFP)-based strategy was evaluated. This method employs two non-fluorescent GFP fragments—GFP11 and GFP1–10—that reassemble into a fluorescent complex when co-localized. In this study, the small GFP fragment (GFP11) was genetically fused to Lipoprotein-Outer Membrane Protein A (Lpp-OmpA) to promote membrane anchoring, while the large GFP fragment (GFP1–10) was fused to Candida antarctica lipase B (CAL-B). The CAL-B-GFP1–10 fusion protein was expressed separately and then incubated with cells displaying Lpp-OmpA-GFP11, facilitating potential reassembly on the cell surface. Restoration of fluorescence served as an indirect indicator of successful surface localization. Enzymatic assays were also performed to compare the activity of CAL-B displayed via the split GFP system versus conventional direct fusion to Lpp-OmpA. The results demonstrated that the split GFP approach can enhance surface display and preserve enzymatic function, offering a promising alternative for displaying large or structurally complex proteins. While further optimization is needed, these findings support the potential of split GFP-assisted strategies in expanding the scope of bacterial surface display applications.
细菌表面展示系统使蛋白质固定在外膜上的应用,如肽库筛选,生物传感和生物吸附。然而,大蛋白质的显示效率仍然有限,主要是由于在跨膜转运大体积多肽的挑战。为了解决这个问题,我们评估了一种基于绿色荧光蛋白(GFP)的分裂策略。该方法使用两个非荧光GFP片段gfp11和gfp1 - 10,它们在共定位时重新组装成荧光复合物。在本研究中,小片段GFP (GFP11)与脂蛋白外膜蛋白A (lp - ompa)融合以促进膜锚定,而大片段GFP (GFP1-10)与南极念珠菌脂肪酶B (CAL-B)融合。CAL-B-GFP1-10融合蛋白单独表达,然后与显示lp - ompa - gfp11的细胞孵育,促进细胞表面的潜在重组。荧光的恢复是表面成功定位的间接指标。还进行了酶分析,比较通过分裂GFP系统显示的CAL-B的活性与传统的直接融合到lp - ompa。结果表明,分裂GFP方法可以增强表面显示并保持酶功能,为显示大型或结构复杂的蛋白质提供了有希望的替代方法。虽然需要进一步优化,但这些发现支持了分裂gfp辅助策略在扩大细菌表面显示应用范围方面的潜力。
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引用次数: 0
Application of natively expressed chitinase as a sustainable fungal bioshield 几丁质酶在真菌生物防护中的应用
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-29 DOI: 10.1016/j.enzmictec.2025.110727
Farah Deeba , Tarek E. Mazeed , Davita L. Watkins , Chad A. Rappleye , David W. Wood
Postharvest losses of fruits and vegetables due to fungal spoilage pose a significant challenge, compounded by growing consumer concerns about the harmful effects of chemical fungicides and the limited effectiveness of traditional food coatings (such as wax and biopolymer formulations) in controlling microorganisms, particularly fungi. In this study, we developed a formulation-free method using a non-modified chitinase from a thermostable strain of Bacillus cereus isolated from soil. The purified chitinase inhibited in vitro mycelium growth of four food-pathogenic fungi: Penicillium digitatum, Neurospora crassa, Aspergillus fumigatus, and Alternaria alternata. Furthermore, when applied directly on strawberry and onion tissue, the purified chitinase inhibited Aspergillus fumigatus and A. niger colonization of the produce. This demonstrates the addition of chitinase provides a cost-effective and non-toxic alternative as a bio-active food coating material to prevent fungal fruit and vegetable spoilage and extend food shelf life.
由于真菌腐败导致的水果和蔬菜采后损失构成了重大挑战,而消费者对化学杀菌剂有害影响的担忧日益增加,传统食品涂层(如蜡和生物聚合物配方)在控制微生物,特别是真菌方面的有效性有限,这使情况更加复杂。在这项研究中,我们开发了一种无配方的方法,使用从土壤中分离的耐热蜡样芽孢杆菌菌株中提取的未经修饰的几丁质酶。纯化的几丁质酶可抑制四种食源性真菌:指状青霉、粗神经孢子菌、烟曲霉和互交霉的体外菌丝体生长。此外,当直接施用于草莓和洋葱组织时,纯化的几丁质酶可以抑制烟曲霉和黑曲霉的定植。这表明添加几丁质酶作为一种具有生物活性的食品涂层材料提供了一种具有成本效益和无毒的替代品,可以防止真菌水果和蔬菜变质,延长食品保质期。
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引用次数: 0
Identification and recombinant expression of a novel defluorinase from Rhodococcus jostii RHA1, for defluorination and biotransformation of the PFAS compound 6:2 fluorotelomer carboxylic acid 一种新型约氏红球菌(Rhodococcus jostii) RHA1脱氟酶的鉴定和重组表达,用于PFAS化合物6:2氟端粒羧酸的脱氟和生物转化
IF 3.4 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-24 DOI: 10.1016/j.enzmictec.2025.110724
Eustace Y. Fernando
Poly and per fluorinated substances (PFAS) are emerging contaminants of concern that are thought to be involved in causing numerous adverse health effects, such as immunosuppression, increased chance of cancer development, and altered levels of hepatic enzyme levels in humans. However, PFAS are considered highly persistent and resistant to biodegradation given the fact that the C-F bond can have a bond dissociation energy of up to 544 kJ/mol. Though many studies have reported PFAS biodefluorination by bacterial isolates and microbial communities, little is known regarding the molecular foundations for biodefluorination. In this study, a novel defluorinase was identified, that is responsible for the biodefluorination of 6:2 fluorotelomer carboxylic acid (6:2 FTCA) in R.jostii RHA1 using the combination of transposome-based insertional mutagenesis and heterologous expression. From a library of 417 R.jostii RHA1. mutants, 3 individual mutants lost their ability for defluorination when they were exposed to 6:2 FTCA (mutant # 15, 32 and 38 – Table S2). The disruption of the genetic locus in all 3 non-defluorinating mutants was identified coding for a putative MhPC superfamily protein. The MhPC superfamily of proteins is known to harbor other proteins such as fluoroacetate dehalogenase (UniProt - Q6NAM1) that are capable of –C-F bond cleavage. This identified gene was cloned into the heterologous expression host M. smegmatis MC2-155. After induction, the M. smegmatis MC2-155 transformant exhibited the ability to defluorinate 6:2 FTCA at a rate of 13 µmol/h (Vmax = 80.9 µmol/min and Km = 5.04 mM in Michaelis-Menten models). In contrast, defluorination was not observed in either abiotic or biotic controls. Further characterization of the novel defluorinase indicated that it could moderately defluorinate the unsaturated PFAS compound 6:2 FTCUA (4.9 µmol/h fluoride) and minimally defluorinate 5:2 sFTOH (1.3 µmol/h fluoride). The novel defluorinase indicated a maximal specific activity of 12.9 ± 1.9 µmol F/hr/g protein, against its primary PFAS substrate, 6:2 FTCA. However, it showed no activity with 5:3 FTCA or sulfonated PFAS compounds such as 6:2 FTS and 8:2 FTS. The wild-type Rhodococcus could defluorinate 6:2 FTCA at a rate of 2.2 µmol/h. The discovery of this MhPC class novel defluorinase in WT R.jostii RHA1. has substantial value since it is responsible for the critical step that initiates defluorination of PFAS compounds such as 6:2 FTCA.
聚氟和全氟物质(PFAS)是令人关注的新兴污染物,被认为与造成许多不利健康影响有关,例如免疫抑制、癌症发展机会增加以及人类肝酶水平改变。然而,考虑到C-F键的键解离能高达544 kJ/mol, PFAS被认为具有高度持久性和抗生物降解性。虽然许多研究报告了细菌分离物和微生物群落对PFAS的生物除氟作用,但对生物除氟的分子基础知之甚少。本研究发现了一种新的脱氟酶,该酶利用转座体插入诱变和异源表达相结合的方法,对rj .jostii RHA1中6:2氟端粒羧酸(6:2 FTCA)进行生物脱氟。从417的图书馆 R。jostii RHA1。当暴露于6:2的FTCA时,3个个体突变体失去了去氟化的能力(突变体# 15、32和38 -表S2)。所有3个非除氟突变体的遗传位点被发现编码一个假定的MhPC超家族蛋白。已知MhPC超家族蛋白含有其他蛋白,如氟乙酸脱卤酶(UniProt - Q6NAM1),这些蛋白能够切割- c - f键。该基因被克隆到异源表达宿主MC2-155中。诱导后,M. smegmatis MC2-155转化能够以13 µmol/h的速率(在Michaelis-Menten模型中,Vmax = 80.9µmol/min, Km = 5.04 mM)对6:2的FTCA进行除氟。相比之下,在非生物或生物对照中均未观察到除氟现象。对该新型脱氟酶的进一步表征表明,该酶能适度脱氟不饱和PFAS化合物6:2 FTCUA(4.9 µmol/h氟)和5:2 sFTOH(1.3 µmol/h氟)。新型去氟酶对其主要PFAS底物6:2 FTCA的最大比活性为12.9 ± 1.9µmol F/hr/g蛋白。然而,它对5:3 FTCA或磺化PFAS化合物(如6:2 FTS和8:2 FTS)没有活性。野生型红球菌能以2.2 µmol/h的速率去氟6:2 FTCA。该MhPC类新型脱氟酶在WT R.jostii RHA1中的发现。具有巨大的价值,因为它负责启动PFAS化合物去氟化的关键步骤,如6:2 FTCA。
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引用次数: 0
Enhanced production of hyperthermophilic Pyrococcus furiosus β-glucosidase in Corynebacterium glutamicum by optimization of the promoter, vector backbone, and His-tag location 通过优化启动子、载体骨架和his -标签位置,提高了谷氨酸棒状杆菌中嗜热热焦球菌β-葡萄糖苷酶的产生
IF 3.7 3区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Pub Date : 2025-07-24 DOI: 10.1016/j.enzmictec.2025.110725
Mehmet Emre Erkanli , Ryu Hong Park , Jingwei Liu , Gunhyeong Lee , Amulya Hota , Jehyeon Lee , Chaehyun Ryu , Ki Jun Jeong , Jin Ryoun Kim
A hyperthermophilic β-glucosidase from Pyrococcus furiosus (PfBGL) is a highly stable and active glycoside hydrolase, well-suited for a wide range of applications. Although PfBGL has been successfully expressed in Escherichia coli, the use of this host limits its applicability in the healthcare and food processing industries due to safety concerns associated with E. coli-based expression systems. Recently, Corynebacterium glutamicum has emerged as a safe and versatile microbial platform for the expression of recombinant proteins used in food processing, pharmaceutical development, therapeutic enzyme production, and probiotic applications. Despite these advantages, heterologous expression in C. glutamicum is often hindered by low protein yields, and PfBGL expression in this host has not been previously explored. In this study, we report for the first time the production of PfBGL in C. glutamicum, achieving a 15-fold enhancement through the optimization of the promoter, the vector backbone, and the His-tag location. Among four different promoters, the Ptrc promoter with RBST7 yielded the highest PfBGL expression. For the Ptrc-RBST7 combination, the PfBGL expression levels further varied depending on the vector backbone. Interestingly, placing the His-tag at the N-terminus of PfBGL not only increased its expression in C. glutamicum, but also enhanced its enzymatic activity (kcat/Km), when compared to C-terminal tagging. Overall, this study showcases a simple yet effective strategy at both genetic and protein levels to enhance PfBGL production in C. glutamicum, thereby broadening its utility as a host for diverse protein production applications.
一种来自炽热焦球菌(Pyrococcus furiosus, PfBGL)的超嗜热β-葡萄糖苷酶(hyperthermoophilic β-glucosidase, PfBGL)是一种高度稳定和活跃的糖苷水解酶,具有广泛的应用前景。虽然PfBGL已在大肠杆菌中成功表达,但由于与大肠杆菌表达系统相关的安全问题,该宿主的使用限制了其在医疗保健和食品加工行业的适用性。最近,谷氨酰胺棒状杆菌作为一种安全、通用的微生物平台,在食品加工、药物开发、治疗酶生产和益生菌应用中表达重组蛋白。尽管具有这些优势,但谷氨酰胺C. glutamum的异源表达经常受到低蛋白产量的阻碍,并且PfBGL在该宿主中的表达先前尚未探索过。在这项研究中,我们首次报道了C. glutamicum中PfBGL的产生,通过优化启动子、载体骨架和his标签的位置,实现了15倍的增强。在4个不同的启动子中,含RBST7的Ptrc启动子的PfBGL表达量最高。对于Ptrc-RBST7组合,PfBGL的表达水平随着载体主干的不同而进一步变化。有趣的是,与c端标记相比,在PfBGL的n端放置his标签不仅增加了PfBGL在C. glutamicum中的表达,而且提高了PfBGL的酶活性(kcat/Km)。总的来说,本研究展示了一种简单而有效的策略,可以在遗传和蛋白质水平上提高谷氨酸酵母PfBGL的产量,从而扩大其作为宿主在多种蛋白质生产应用中的效用。
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Enzyme and Microbial Technology
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