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2015 8th International Conference on Biomedical Engineering and Informatics (BMEI)最新文献

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A positive region-based dimensionality reduction from high dimensional data 一种基于区域的高维数据降维方法
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401579
Dai Zhe, L. Jianhui
Dimensionality reduction is an important attribute process work. Dimensionality reduction, i.e, attribute reduction is to delete some uncesserary attributes at rough sets. At present, many attribute reduction methods have provided to delete some superfluous and irrelevant attributes from large-scale complete data sets. The main drawback of most attribute reduction algorithms is that they can not remove some examples in the process of dimensionality reduction, which degrades a computational efficiency of attribute reduction. To overcome this drawback, an improved attribute reduction algorithm for complete data sets is proposed. In addition, the classification performance of attribute reduction is optimized. At first, the compact decision system is presented to delete some repeated objects. Then the significance measure of attributes is provided for candidate attributes. In addition, the novel approach of attribute reduction under the proposed significance measure of attributes was developed. In order to verify the efficiency of our given algorithm, the experiments on UCI datasets are performed by comparing with other attribute reduction algorithms. The results on the experiments tell us that our given algorithm obtains promising improvement for selecting an attribute reduct.
降维是一项重要的属性处理工作。降维即属性约简就是在粗糙集上删除一些不需要的属性。目前,已有许多属性约简方法用于从大规模完整数据集中删除一些多余和不相关的属性。大多数属性约简算法的主要缺点是不能在降维过程中去除一些样本,从而降低了属性约简的计算效率。为了克服这一缺点,提出了一种改进的完整数据集属性约简算法。此外,对属性约简的分类性能进行了优化。首先,提出了一种精简决策系统,用于删除一些重复对象。然后给出了候选属性的显著性度量。在此基础上,提出了一种新的属性显著性度量下的属性约简方法。为了验证本文算法的有效性,通过与其他属性约简算法的对比,在UCI数据集上进行了实验。实验结果表明,该算法在选择属性约简方面取得了很好的改进。
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引用次数: 0
A liquid conductivity measurement system based on electromagnetic induction 一种基于电磁感应的液体电导率测量系统
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401603
Jing Liu, Li Ke, Qiang Du, Ling Han
Electromagnetic measurement method was a non-contact biological tissue conductivity measurement technology. This paper presented a liquid conductivity measurement system based on electromagnetic induction; phase difference information of induced magnetic field was used as detection signal in the system. Firstly, the system was composed of excitation source based on directly digital synthesis, phase detector based on SR844 RF lock-in amplifier, excitation-detection coils sensor and signal processing circuit. Secondly, the maximum error of exciting source frequency accuracy was 2.4%, the phase drift of system was 0.001° /min, the phase resolution was 0.02°, the minimum conductivity could be detected by this system was 0.004S/m. Finally, the saline solution experiments of different concentration and different kinds of drinking water were made by this system, the experimental results demonstrated that the system could obviously identify category of water, and measurement results were consistent with the theory of electromagnetic field.
电磁测量法是一种非接触式生物组织电导率测量技术。提出了一种基于电磁感应的液体电导率测量系统;系统采用感应磁场的相位差信息作为检测信号。首先,系统由基于直接数字合成的激励源、基于SR844射频锁相放大器的鉴相器、激励检测线圈传感器和信号处理电路组成。其次,激励源频率精度的最大误差为2.4%,系统相漂移为0.001°/min,相分辨率为0.02°,系统可检测的最小电导率为0.004S/m。最后,利用该系统对不同浓度的盐水溶液和不同种类的饮用水进行了实验,实验结果表明,该系统能明显识别水的种类,测量结果与电磁场理论相吻合。
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引用次数: 0
A comparison of the Homodyned K-distribution and the single distributions for RF ultrasonic speckle modeling 射频超声散斑建模中homodyk分布与单一分布的比较
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401487
Xiao Hu, Yufeng Zhang, Li Deng, Shuang Peng, Kexin Zhang
For observing the parameters and the fitting performance, this paper compares the Homodyned K-distribution with the single distributions for RF ultrasonic speckle modeling. To implement different scatterer distributions representing a variable density of random scatterers with or without coherent component, A set of 3D scatterer models are built based on a three-dimensional Hilbert curve following Gamma distributions with different values of shape and scale parameters. The RF data are simulated by using the Field II software. Then the maximum likelihood estimation (MLE) for statistical histograms of the energy of the RF data is performed to obtain the values of log-likelihood and model parameters. In order to evaluate the fitting performance and parameter meaning of the HK distribution, the mean and standard deviation of these estimated values are compared with those based on the optimal fitting model chosen from commonly used single-distributions (OSD), the K, Rayleigh and Rician distributions. The results show the parameters of Homodyned K-distribution obtained by the MLE could independently represent the clustered, random or uniform characteristics for scatterer distribution. However, the fitting accuracy could only catch up with that based on the OSD joint model under the condition that the tissue contains the scatterers from medium to high effective-density, as well as deterministic or non-deterministic components. The OSD model is still a better choice in the case of the fitting performance emphasized in practice, especially the tissue with a wider range of scatterer densities and deterministic components.
为了观察参数和拟合性能,本文将高频超声散斑建模的homodyk分布与单一分布进行了比较。为了实现具有或不具有相干分量的可变密度随机散射体的不同散射体分布,基于遵循不同形状和尺度参数值的Gamma分布的三维Hilbert曲线,建立了一组三维散射体模型。利用Field II软件对射频数据进行仿真。然后对射频数据的能量统计直方图进行最大似然估计(MLE),得到对数似然值和模型参数。为了评价HK分布的拟合性能和参数意义,将这些估估值的均值和标准差与基于常用单分布(OSD)、K分布、Rayleigh分布和rics分布中选择的最优拟合模型的均值和标准差进行比较。结果表明,MLE得到的Homodyned k分布参数可以独立地表示散点分布的聚类、随机或均匀特征。然而,只有在组织中含有中高有效密度的散射体,以及确定性或非确定性成分的情况下,拟合精度才能赶上基于OSD关节模型的拟合精度。在实践中强调拟合性能的情况下,特别是在散射体密度范围较大、成分具有确定性的组织中,OSD模型仍然是较好的选择。
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引用次数: 0
An optimizing procedure of the wireless power transfer link for an intraocular implantable device 一种眼内植入式装置无线电力传输链路的优化方法
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401526
Zhidong Miao, Dake Liu, Chen Gong
This paper presents a design method and results of prototyping for the wireless power transfer (WPT) link used in intraocular implantable devices. In this kind of applications, the coil size is constrained strictly, which makes it hard to find an efficient configuration by only changing the coil geometry. Therefore, in our design, we took frequency into account as another design dimension to expand the design margin. We set up a WPT design flow using a novel scope of matching network and taking frequency as a variable parameter. Finally, we obtained a WPT coupling efficiency up to 63.9%.
本文介绍了一种用于眼内植入式装置的无线电力传输链路的设计方法和原型设计结果。在这类应用中,线圈的尺寸受到严格的限制,这使得仅通过改变线圈的几何形状很难找到有效的配置。因此,在我们的设计中,我们将频率作为另一个设计维度来考虑,以扩大设计余量。以频率为可变参数,采用新颖的匹配网络范围,建立了WPT设计流程。最后,我们获得了高达63.9%的WPT耦合效率。
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引用次数: 3
The magnetic induction tomography measurement system based on Helmholtz coil 基于亥姆霍兹线圈的磁感应层析成像测量系统
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401468
Haijun Luo, Xin Jiang
Magnetic induction tomography (MIT) is a contactless measurement of biological tissue conductivity imaging technique. The spiral coil is widely used, which leads to the nonuniformity of sensitivity distribution of the detection signal. This paper proposed the Helmholtz coil which can generate a set of uniform excitation fields, and analyzed the uniformity of excitation field. In MIT system, the exciting magnetic field is generated through sine-wave current, with the frequency of 10MHz and exciting current of 20mA. The experimental physics model simulated cerebral hemorrhage is produced by using the distilled water, the agar powder and NaCl. The result experiments show that this system can test the changes of the conductivity of partial tissues, and reflect the position of the foreign matter, but the image is enlarged compared with the actual one.
磁感应层析成像(MIT)是一种非接触式测量生物组织电导率的成像技术。螺旋线圈的广泛使用导致了检测信号灵敏度分布的不均匀性。提出了一种能产生一组均匀激励场的亥姆霍兹线圈,并对其均匀性进行了分析。在MIT系统中,激励磁场是通过正弦波电流产生的,频率为10MHz,激励电流为20mA。采用蒸馏水、琼脂粉和NaCl制备了模拟脑出血的实验物理模型。实验结果表明,该系统可以检测局部组织的电导率变化,并反映异物的位置,但图像与实际相比有所放大。
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引用次数: 3
Analysis of scale variations of local features for accurate classification of Emphysema images 局部特征尺度变化分析对肺气肿图像的准确分类
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401464
Musibau A. Ibrahim, R. Mukundan
The effectiveness of local or global features has recently attracted growing attention in the field of texture image classification and retrieval. The features of the local binary pattern (LBP) for instance, usually lack global spatial information while global descriptors would provide very little local information. This paper proposes two different descriptors to circumvent these shortcomings by providing more information to describe different textural structures of the Emphysema computed tomography (CT) images. The proposed LBP+Multi-fractal Images (LMI) and the rotational invariant LBP+Multi-fractal Images (RLMI) can provide more accurate classification results by using a hybrid concatenation of the local and global features. The experimental approaches are validated for different scales of Emphysema images during the classification process in order to determine the appropriate image size that could yield the maximum classification accuracy. The experimental results show that the descriptors extracted from the combined features considerably improve the performance of the classifiers. The results also indicate that the LMI descriptor outperforms the earlier approaches and demonstrate the discriminating power and robustness of the combined features for accurate classification of Emphysema CT images.
局部特征和全局特征的有效性近年来在纹理图像分类和检索领域受到越来越多的关注。例如,局部二进制模式(LBP)的特征通常缺乏全局空间信息,而全局描述符提供的局部信息很少。本文提出了两种不同的描述符,通过提供更多的信息来描述肺气肿计算机断层扫描(CT)图像的不同纹理结构,以避免这些缺点。本文提出的LBP+多重分形图像(LMI)和旋转不变LBP+多重分形图像(RLMI)通过局部特征和全局特征的混合拼接,可以提供更准确的分类结果。在分类过程中,对实验方法进行了不同尺度的肺气肿图像的验证,以确定能够产生最大分类精度的合适图像尺寸。实验结果表明,从组合特征中提取的描述子显著提高了分类器的性能。结果还表明,LMI描述符优于先前的方法,并证明了组合特征对肺气肿CT图像的准确分类的判别能力和鲁棒性。
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引用次数: 2
Target vessel identification in endoscopic coronary artery bypass grafting 内镜下冠状动脉旁路移植术中靶血管的识别
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401541
Yifeng Sun, Lixu Gu, Junfeng Cai
Minimal invasive direct coronary artery bypass grafting (MIDCAB) procedures are potentially advantageous over conventional open surgery, while one major limitation is the narrow view of the endoscope and the difficulty in detecting stenosis from the endoscopic view. In this paper, we propose a frame to align the endoscope view and the 3D-vessel model reconstructed from angiography. We register the endoscopic video frame with the 3D-vessel model by electro-magnetic sensor, and then we segment the vessel in the endoscopic video frame with HSV (hue, saturation, value) and hessian transformation, and refined the registration with the vessel model by Coherent Points Drifting. We have validated the proposed method on a static phantom heart model and a real patient's endoscope video. RMSE (root mean-square error) was employed to evaluate our method and the registration error for the phantom model were 1.1+-0.2mm, for the real patient was 3.1mm.
微创直接冠状动脉旁路移植术(MIDCAB)与传统的开放手术相比具有潜在的优势,但一个主要的限制是内窥镜视野狭窄,难以从内窥镜视野中发现狭窄。在本文中,我们提出了一种框架来对齐内窥镜视图和由血管造影重建的3d血管模型。首先利用电磁传感器将内镜视频帧与3d血管模型进行配准,然后利用HSV (hue, saturation, value)变换和hessian变换对内镜视频帧中的血管进行分割,最后利用相干点漂移(Coherent Points Drifting)对血管模型进行细化配准。我们已经在一个静态模拟心脏模型和一个真实病人的内窥镜视频上验证了所提出的方法。采用均方根误差(RMSE)对我们的方法进行评价,模型的配准误差为1.1±0.2mm,真实患者的配准误差为3.1mm。
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引用次数: 0
A novel method for predicting protein phosphorylation via site-modification network profiles 一种通过位点修饰网络预测蛋白磷酸化的新方法
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401548
Zijun Qin, Minghui Wang, Yujie Jiang, Xiaoyi Xu, Huanqing Feng, Ao Li
Protein phosphorylation, one of the most important types of post-translational modifications (PTMs), participates in multiple cellular processes. Accurate prediction on phosphorylaiton sites has become necessary, as many modifications are related to diseases and used as biomarkers. Currently a number of computational approaches only establish prediction models on sequence information. In this study, site-modification network (SMNet) profiles are proposed to enhance the prediction performance, which reflect information among in situ PTMs. In addition, a two-step algorithm that incorporates SVM with feature selection is adopted. To further demonstrate the method, we compare it with PPSP and GPS 3. 0, finally the results indicate that SMNet profiles effectively improve the performance on predicting phosphorylation sites.
蛋白磷酸化是最重要的翻译后修饰(PTMs)类型之一,参与多种细胞过程。由于许多磷酸化修饰与疾病相关并被用作生物标志物,因此对磷酸化位点的准确预测变得非常必要。目前许多计算方法都是基于序列信息建立预测模型。在本研究中,提出了位点修改网络(SMNet)剖面来提高预测性能,该剖面反映了原位ptm之间的信息。此外,采用了将SVM与特征选择相结合的两步算法。为了进一步验证该方法,我们将其与PPSP和GPS 3进行了比较。最后,结果表明SMNet谱有效地提高了磷酸化位点的预测性能。
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引用次数: 0
Drowsiness assessment using electroencephalogram in driving simulator environment 驾驶模拟器环境下脑电图睡意评估
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401497
Izzat Aulia Akbar, T. Igasaki, N. Murayama, Zhencheng Hu
Traffic accident is one of the most important problems in many countries. One of traffic accident causes is drowsiness. Many studies have been done to solve this problem. One of them is to capture the driver's face expression and estimate the driver's drowsiness. Besides measuring the driver's physiological condition and use it to predict one's drowsiness is also considered. Since drowsiness is strongly related to human brain, by assessing drowsiness using biological signal especially brain signal become the most promising approach to evaluate drowsiness. We proposed a study to investigate the relationship between drowsiness and physiological condition by employing electroencephalogram (EEG) signal and Japanese version of Karolinska sleepiness scale (KSS-J) in driving simulator environment. The result showed alpha band power of EEG signal from occipital lobe in drowsy condition (KSS-J ≥ 7) increased significantly compared with that in alert condition (KSS-J <; 7) with P <; 0.001. Therefore, it is suggested that EEG is effective to find the drowsiness in driving simulator environment.
交通事故是许多国家面临的最重要的问题之一。交通事故的原因之一是嗜睡。为了解决这个问题已经做了很多研究。其中之一是捕捉司机的面部表情,估计司机的困倦程度。此外,测量驾驶员的生理状况,并利用它来预测一个人的困倦也被考虑。由于嗜睡与大脑密切相关,利用生物信号尤其是大脑信号来评估嗜睡成为最有希望评估嗜睡的方法。在驾驶模拟器环境下,采用脑电图(EEG)信号和日本版Karolinska嗜睡量表(KSS-J)研究嗜睡与生理状态的关系。结果表明:与清醒状态(KSS-J < 7)相比,困倦状态(KSS-J≥7)枕叶脑电信号α频带功率显著增加;7) P <;0.001. 因此,在驾驶模拟器环境下,脑电图可以有效地发现驾驶员的困倦状态。
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引用次数: 5
A coupled transport model of Brownian motors driven by two periodic forces 两个周期性力驱动的布朗电机耦合输运模型
Pub Date : 2015-10-01 DOI: 10.1109/BMEI.2015.7401512
Weixia Wu
A coupled transport model of Brownian motors driven by two periodic forces is established. The effects of the two periodic forces on the cooperative transport behaviours of Brownian motors are investigated, including the frequencies and intensities. The results show that when the frequencies of periodic forces are all too large or too small, the directed transport of the motors system can't appear, and appropriate frequencies can promote the transport. Otherwise, with increasing the intensities of periodic forces, the directed transport is more and more obvious. In addition, the effect of a constant force is discussed. It is found that the constant force on the non ratchet potential can't offer effective energy for the directed transport of system, but the constant force on the ratchet potential can offer.
建立了两个周期力驱动布朗电机的耦合输运模型。研究了两种周期性力对布朗电机协同输运行为的影响,包括频率和强度。结果表明:当周期力的频率都过大或过小时,电机系统的定向输运都不会出现,适当的频率可以促进电机系统的定向输运;反之,随着周期性力强度的增加,定向输运越来越明显。此外,还讨论了恒力的影响。研究发现,非棘轮势的恒力不能为系统的定向输运提供有效能量,而棘轮势的恒力可以提供有效能量。
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引用次数: 0
期刊
2015 8th International Conference on Biomedical Engineering and Informatics (BMEI)
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