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Elevated p16Ink4a Expression Enhances Tau Phosphorylation in Neurons Differentiated From Human-Induced Pluripotent Stem Cells. p16Ink4a表达升高可增强人诱导多能干细胞分化神经元的Tau磷酸化
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-01-05 DOI: 10.1111/acel.14472
Kristopher Holloway, Kashfia Neherin, Yingduo Song, Kazuhito Sato, Andrew Houston, Feng Chen, Li Ding, Hong Zhang

Increased expression of the cyclin-dependent kinase inhibitor p16Ink4a (p16) is detected in neurons of human Alzheimer's disease (AD) brains and during normal aging. Importantly, selective eliminating p16-expressing cells in AD mouse models attenuates tau pathologies and improves cognition. But whether and how p16 contributes to AD pathogenesis remains unclear. To address this question, we tested whether induction of p16 expression in neurons exacerbates AD pathologies. We created a doxycycline-inducible system to trigger p16 up-regulation in human-induced pluripotent stem cells (iPSCs) and neurons differentiated from iPSCs. We demonstrated that up-regulated p16 expression in iPSCs reduces cell proliferation, down-regulates cell cycle genes, and up-regulates genes involved in focal adhesion, interferon α response and PI3K-Akt signaling. Our approach enables temporal control of p16 induction upon differentiation from iPSCs to neurons. In differentiated cortical neurons, we found that up-regulation of p16 increases tau phosphorylation at Ser202/Thr205 and Thr231 in a cell-autonomous manner, while amyloid beta secretion is not affected. These data suggest a critical role of p16 in regulating tau phosphorylation in neurons, and thereby contributing to pathological progression of AD. As pathological tau tangles have been shown to induce p16 expression, our studies suggest a positive feedback loop between p16 and tau to exacerbate tau pathologies.

细胞周期蛋白依赖性激酶抑制剂p16Ink4a (p16)在人类阿尔茨海默病(AD)大脑和正常衰老过程中的神经元中表达增加。重要的是,在AD小鼠模型中选择性消除p16表达细胞可减轻tau病理并改善认知。但p16是否以及如何参与阿尔茨海默病的发病机制尚不清楚。为了解决这个问题,我们测试了神经元中p16表达的诱导是否会加剧AD病理。我们创建了一个强力霉素诱导的系统,以触发人类诱导的多能干细胞(iPSCs)和从iPSCs分化的神经元中p16的上调。研究表明,iPSCs中p16表达上调可抑制细胞增殖,下调细胞周期基因,上调参与局灶黏附、干扰素α反应和PI3K-Akt信号传导的基因。我们的方法能够暂时控制p16诱导从iPSCs分化到神经元。在分化的皮质神经元中,我们发现p16的上调以细胞自主的方式增加了Ser202/Thr205和Thr231位点的tau磷酸化,而淀粉样蛋白分泌不受影响。这些数据表明p16在调节神经元中tau磷酸化的关键作用,从而促进AD的病理进展。由于病理性tau缠结已被证明可诱导p16表达,我们的研究表明p16和tau之间存在正反馈回路,从而加剧tau的病理。
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引用次数: 0
Tgm2-Catalyzed Covalent Cross-Linking of IκBα Drives NF-κB Nuclear Translocation to Promote SASP in Senescent Microglia. tgm2催化的i -κB α共价交联驱动NF-κB核易位促进衰老小胶质细胞SASP。
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-01-03 DOI: 10.1111/acel.14463
Zhiqiang Li, Tianxiang Wang, Sijing Du, Zelong Miao, Yujiao Zhao, Yuxiang Tang, Xianbin Meng, Shangcheng Yu, Dongyuan Zhang, Hao Jiang, Kunlin Du, Wei Wei, Haiteng Deng

Microglia, as resident immune cells in the central nervous system (CNS), play a crucial role in maintaining homeostasis and phagocytosing metabolic waste in the brain. Senescent microglia exhibit decreased phagocytic capacity and increased neuroinflammation through senescence-associated secretory phenotype (SASP). This process contributes to the development of various neurodegenerative diseases, including Alzheimer's disease (AD). In this study, we found that SASP was elevated in senescent microglia, and proteomics showed that Tgm2 was upregulated. Mechanistically, we revealed that Tgm2-catalyzed covalent cross-linking of IκBα at K22 and Q248 residues in the cytoplasm of microglia, resulting in the reduction of IκBα and nuclear translocation of NF-κB to promote SASP production. Treatment of senescent microglia with Tgm2 inhibitors (Tg2-IN1 and Cys-D) resulted in reduced NF-κB nuclear translocation and decreased SASP. Additionally, oral administration of Cys-D significantly improved the aging phenotype in aged mice. To summarize, Tgm2 is a potential target for antiaging, and inhibitors of Tgm2 can serve as novel prophylactics or senomorphics.

小胶质细胞作为中枢神经系统(CNS)的常驻免疫细胞,在维持大脑内稳态和吞噬代谢废物方面起着至关重要的作用。衰老小胶质细胞通过衰老相关分泌表型(SASP)表现出吞噬能力下降和神经炎症增加。这一过程有助于各种神经退行性疾病的发展,包括阿尔茨海默病(AD)。在本研究中,我们发现SASP在衰老小胶质细胞中升高,蛋白质组学显示Tgm2上调。在机制上,我们发现tgm2催化了小胶质细胞细胞质中K22和Q248残基上i -κB α的共价交联,导致i -κB α减少和NF-κB核易位,从而促进SASP的产生。用Tgm2抑制剂(Tg2-IN1和Cys-D)治疗衰老小胶质细胞可减少NF-κB核易位和降低SASP。此外,口服Cys-D可显著改善老年小鼠的衰老表型。综上所述,Tgm2是一个潜在的抗衰老靶点,Tgm2抑制剂可以作为新的预防或促衰老药物。
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引用次数: 0
Investigating the Role of TRPV4 and GPR35 Interaction in Endothelial Dysfunction in Aging Mice. 研究TRPV4和GPR35相互作用在衰老小鼠内皮功能障碍中的作用。
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-01-02 DOI: 10.1111/acel.14469
Xiaoxue Tian, Hao Kan, Liu Yang, Zhiwei Wang, Tiantian Zhang, Ka Zhang, Aiqin Mao, Xin Wen, Tingting Zhou, Xiaoyan Wang, Xiaodong Zhang, Lei Feng, Li Geng

Endothelial dysfunction, characterized by a decline in endothelial physiological functions, is a significant aspect of cardiovascular aging, contributing notably to arterial stiffness, atherosclerosis, and hypertension. Transient receptor potential channel V4 (TRPV4), a key member of Ca2+-permeable channels, plays a crucial role in maintaining vascular functions. However, the role and mechanisms of TRPV4 in aging-related endothelial dysfunction remain incompletely understood. Here, we demonstrated a marked reduction in endothelial TRPV4 function without alterations in its expression, leading to abnormal endothelial Ca2+ signaling and impaired vasodilation in aging mesenteric arteries. Employing transcriptome sequencing, co-IP, and PLA assays, we characterized G protein-coupled receptor 35 (GPR35) interacting with TRPV4, and abnormally enhanced interactions were found in aging endothelial cells. Subsequently, we revealed that intensive GPR35-TRPV4 interaction significantly contributes to endothelial dysfunction during aging, utilizing TRPV4 endothelial-specific knockout (TRPV4EC -/-), AAV-FLT1-shRNA (GPR35) mice, and GPR35 overexpressed/knocked-down HUVECs. Furthermore, molecular docking analysis and subsequent co-IP and pressure myograph experiments indicated that both Thonningianin A and Carfilzomib efficiently restored the GPR35-TRPV4 interaction, preventing endothelial dysfunction and vasodilation impairment. Our study identifies the crucial role of GPR35-TRPV4 interaction in aging-associated abnormal endothelial function and vascular tone modulation. Restoring GPR35-TRPV4 interaction via Thonningianin A or Carfilzomib represents a promising precision approach for aging-related endothelial dysfunction.

以内皮生理功能下降为特征的内皮功能障碍是心血管衰老的一个重要方面,主要导致动脉硬化、动脉粥样硬化和高血压。瞬时受体电位通道V4 (Transient receptor potential channel V4, TRPV4)是Ca2+可渗透通道的关键成员,在维持血管功能中起着至关重要的作用。然而,TRPV4在衰老相关内皮功能障碍中的作用和机制尚不完全清楚。在这里,我们证明了内皮细胞TRPV4功能的显著降低而其表达没有改变,导致内皮细胞Ca2+信号异常和老化的肠系膜动脉血管舒张受损。通过转录组测序、co-IP和PLA分析,我们表征了G蛋白偶联受体35 (GPR35)与TRPV4相互作用,并在衰老的内皮细胞中发现异常增强的相互作用。随后,我们利用TRPV4内皮特异性敲除(TRPV4EC -/-)、AAV-FLT1-shRNA (GPR35)小鼠和GPR35过表达/敲除的huves,揭示了GPR35-TRPV4的强烈相互作用显著促进了衰老过程中内皮功能障碍。此外,分子对接分析以及随后的协同ip和压力肌图实验表明,Thonningianin A和Carfilzomib都能有效地恢复GPR35-TRPV4相互作用,防止内皮功能障碍和血管舒张功能障碍。我们的研究确定了GPR35-TRPV4相互作用在衰老相关的内皮功能异常和血管张力调节中的关键作用。通过Thonningianin A或Carfilzomib恢复GPR35-TRPV4相互作用是一种有希望的精确方法,用于治疗衰老相关的内皮功能障碍。
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引用次数: 0
CALB1 and RPL23 Are Essential for Maintaining Oocyte Quality and Function During Aging. CALB1和RPL23对维持衰老过程中卵母细胞的质量和功能至关重要。
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-01-02 DOI: 10.1111/acel.14466
Yingxue Han, Zihuan Du, Hao Wu, Rong Zhao, Jikang Liu, Shuai Gao, Shenming Zeng

With advancing age, significant changes occur in the female reproductive system, the most notable of which is the decline in oocyte quality, a key factor affecting female fertility. However, the mechanisms underlying oocyte aging remain poorly understood. In this study, we obtained oocytes from aged and young female mice and performed single-cell transcriptome sequencing, comparing our findings with existing proteomic analyses. Our analysis revealed that one of the primary characteristics of aging oocytes is the disruption of calcium ion homeostasis. Specifically, we identified two key genes involved in the oocyte aging process, Calb1 and Rpl23. Experimental validation demonstrated that knockdown of CALB1 in oocytes led to reduced calcium ion levels in the endoplasmic reticulum and mitochondria, resulting in mitochondrial dysfunction and meiotic defects. Further experiments suggested that RPL23 may function as a downstream gene of CALB1, and its knockdown caused mitochondrial dysfunction, excessive accumulation of reactive oxygen species (ROS), and spindle assembly defects. Notably, overexpression of these two genes in aging oocytes partially rescued the maternal age-related defective phenotypes, underscoring their crucial roles in oocyte aging. This study provides a comprehensive understanding of the specific mechanisms underlying mouse oocyte aging at single-cell resolution, supported by experimental validation, and offers new directions and potential targets for future research into age-related reproductive health issues.

随着年龄的增长,女性生殖系统会发生重大变化,其中最明显的变化是卵母细胞质量的下降,这是影响女性生育能力的一个关键因素。然而,人们对卵母细胞衰老的机制仍然知之甚少。在这项研究中,我们从衰老和年轻的雌性小鼠身上获取了卵母细胞,并进行了单细胞转录组测序,将我们的发现与现有的蛋白质组分析进行了比较。我们的分析发现,衰老卵母细胞的主要特征之一是钙离子平衡被破坏。具体来说,我们发现了两个参与卵母细胞衰老过程的关键基因:Calb1 和 Rpl23。实验验证表明,在卵母细胞中敲除 CALB1 会导致内质网和线粒体中的钙离子水平降低,从而导致线粒体功能障碍和减数分裂缺陷。进一步的实验表明,RPL23 可能是 CALB1 的下游基因,敲除 RPL23 会导致线粒体功能障碍、活性氧(ROS)过度积累和纺锤体组装缺陷。值得注意的是,这两个基因在衰老卵母细胞中的过表达部分地挽救了与母体年龄相关的缺陷表型,强调了它们在卵母细胞衰老中的关键作用。这项研究以单细胞分辨率全面了解了小鼠卵母细胞衰老的具体机制,并辅以实验验证,为今后研究与年龄相关的生殖健康问题提供了新的方向和潜在靶标。
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引用次数: 0
P2Y2 Inhibition Modifies the Anabolic Response to Exercise in Adult Mice. P2Y2抑制改变成年小鼠对运动的合成代谢反应。
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2024-12-31 DOI: 10.1111/acel.14464
Amit Chougule, Chunbin Zhang, Jordan Denbow, Nickolas Vinokurov, Devin Mendez, Elizabeth Vojtisek, Joseph Gardinier

As the aging population continues to grow, the incidence of osteoporotic fractures increases and is compounded by our lack of therapeutic strategies that increase bone formation. Although exercise and physical activity play a key role in maintaining bone mass throughout our lives, the loads and exertion required to elicit an anabolic response becomes exceedingly difficult to achieve with age. Based on previous work, the P2Y2 receptor offers a unique therapeutic target to increasing bone mass by modifying the mechanotransduction. Others have also shown P2Y2 to have a negative effect on osteoblast function. However, the extent to which inhibiting P2Y2 pharmaceutically improves bone mass or the mechanotransduction of bone remains unknown. Our central hypothesis for this study states that inhibiting P2Y2 activity can enhance the anabolic response to loading in an aging population. To test this hypothesis, the anabolic response to exercise was examined by treating adult mice, which typically display a minimal response, with the P2Y2 inhibitor AR-C118925XX (ARC). Our findings from this study demonstrate that ARC treatment of adult mice increases periosteal bone formation in response to exercise. The enhanced response to exercise was characterized by a reduction in osteocytes' induction of osteoclast activity. Endocortical bone formation also increased with treatment independently of exercise, providing gains in mechanical strength and tissue level properties. Overall, inhibiting P2Y2 activation has a beneficial effect on bone formation and the anabolic response to loading, namely by limiting osteoclast activation.

随着老龄化人口的持续增长,骨质疏松性骨折的发病率增加,并且由于我们缺乏增加骨形成的治疗策略而变得更加复杂。尽管在我们的一生中,锻炼和体育活动在维持骨量方面发挥着关键作用,但随着年龄的增长,引发合成代谢反应所需的负荷和努力变得极其困难。基于先前的工作,P2Y2受体通过改变机械转导提供了一个独特的治疗靶点来增加骨量。其他研究也表明P2Y2对成骨细胞功能有负面影响。然而,抑制P2Y2在药物上改善骨量或骨的机械转导的程度仍不清楚。本研究的中心假设是,抑制P2Y2活性可以增强老龄化人群对负荷的合成代谢反应。为了验证这一假设,通过使用P2Y2抑制剂AR-C118925XX (ARC)治疗通常表现出最小反应的成年小鼠,研究了运动对合成代谢的反应。我们的研究结果表明,ARC治疗的成年小鼠在运动后增加了骨膜骨的形成。对运动的增强反应的特征是骨细胞诱导破骨细胞活性的减少。皮质内骨形成也增加了独立于运动的治疗,提供了机械强度和组织水平特性的增益。总的来说,抑制P2Y2激活对骨形成和负荷的合成代谢反应有有益的影响,即通过限制破骨细胞的激活。
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引用次数: 0
Featured Cover 特色封面
IF 7.8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2023-10-16 DOI: 10.1111/acel.14016
Hasan Ishtayeh, Margarita Galves, Tania T. Barnatan, Yevgeny Berdichevsky, Fatima Amer-Sarsour, Metsada Pasmanik-Chor, Itzhak Braverman, Sergiu C. Blumen, Avraham Ashkenazi

Cover legend: The cover image is based on the Research Article Oculopharyngeal muscular dystrophy mutations link the RNA-binding protein HNRNPQ to autophagosome biogenesis by Hasan Ishtayeh et al., https://doi.org/10.1111/acel.13949

封面图例:封面图像基于Hasan Ishtayeh等人的研究文章《眼咽肌营养不良突变将RNA结合蛋白HNRNPQ与自噬体生物发生联系起来》。,https://doi.org/10.1111/acel.13949
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引用次数: 0
Intersection clock reveals a rejuvenation event during human embryogenesis 交叉点时钟揭示了人类胚胎发生过程中的再生事件。
IF 7.8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2023-10-02 DOI: 10.1111/acel.13922
Csaba Kerepesi, Vadim N. Gladyshev

Recent research revealed a rejuvenation event during early development of mice. Here, by examining epigenetic age dynamics of human embryogenesis, we tested whether a similar event exists in humans. For this purpose, we developed an epigenetic clock method, the intersection clock, that utilizes bisulfite sequencing in a way that maximizes the use of informative CpG sites with no missing clock CpG sites in test samples and applied it to human embryo development data. We observed no changes in the predicted epigenetic age between cleavage stage and blastocyst stage embryos; however, a significant decrease was observed between blastocysts and cells representing the epiblast. Additionally, by applying the intersection clock to datasets spanning pre and postimplantation, we found no significant change in the epigenetic age during preimplantation stages; however, the epigenetic age of postimplantation samples was lower compared to the preimplantation stages. We further investigated the epigenetic age of primed (representing early postimplantation) and naïve (representing preimplantation) pluripotent stem cells and observed that in all cases the epigenetic age of primed cells was significantly lower than that of naïve cells. Together, our data suggest that human embryos are rejuvenated during early embryogenesis. Hence, the rejuvenation event is conserved between the mouse and human, and it occurs around the gastrulation stage in both species. Beyond this advance, the intersection clock opens the way for other epigenetic age studies based on human bisulfite sequencing datasets as opposed to methylation arrays.

最近的研究揭示了小鼠早期发育过程中的一个再生事件。在这里,通过研究人类胚胎发生的表观遗传学年龄动力学,我们测试了人类是否存在类似的事件。为此,我们开发了一种表观遗传学时钟方法,即交叉时钟,该方法利用亚硫酸氢盐测序,最大限度地利用测试样本中的信息CpG位点,而不缺失时钟CpG位点。并将其应用于人类胚胎发育数据。我们观察到卵裂期和胚泡期胚胎之间预测的表观遗传学年龄没有变化;然而,在胚泡和代表外胚层的细胞之间观察到显著的减少。此外,通过将交叉时钟应用于植入前和植入后的数据集,我们发现植入前阶段的表观遗传学年龄没有显著变化;然而,与植入前阶段相比,植入后样本的表观遗传学年龄较低。我们进一步研究了引发(代表植入后早期)和幼稚(代表植入前)多能干细胞的表观遗传年龄,并观察到在所有情况下,引发细胞的表表观遗传学年龄都显著低于幼稚细胞。总之,我们的数据表明,人类胚胎在早期胚胎发生过程中会再生。因此,再生事件在小鼠和人类之间是保守的,并且发生在两个物种的原肠胚形成阶段前后。除此之外,交叉时钟为其他基于人类亚硫酸氢盐测序数据集而非甲基化阵列的表观遗传学年龄研究开辟了道路。
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引用次数: 1
Transcriptional changes of the aging lung 衰老肺的转录变化。
IF 7.8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2023-09-14 DOI: 10.1111/acel.13969
Minxue Jia, Paula A. Agudelo Garcia, Jose A. Ovando-Ricardez, Tracy Tabib, Humberto T. Bittar, Robert A. Lafyatis, Ana L. Mora, Panayiotis V. Benos, Mauricio Rojas

Aging is a natural process associated with declined organ function and higher susceptibility to developing chronic diseases. A systemic single-cell type-based study provides a unique opportunity to understand the mechanisms behind age-related pathologies. Here, we use single-cell gene expression analysis comparing healthy young and aged human lungs from nonsmoker donors to investigate age-related transcriptional changes. Our data suggest that aging has a heterogenous effect on lung cells, as some populations are more transcriptionally dynamic while others remain stable in aged individuals. We found that monocytes and alveolar macrophages were the most transcriptionally affected populations. These changes were related to inflammation and regulation of the immune response. Additionally, we calculated the LungAge score, which reveals the diversity of lung cell types during aging. Changes in DNA damage repair, fatty acid metabolism, and inflammation are essential for age prediction. Finally, we quantified the senescence score in aged lungs and found that the more biased cells toward senescence are immune and progenitor cells. Our study provides a comprehensive and systemic analysis of the molecular signatures of lung aging. Our LungAge signature can be used to predict molecular signatures of physiological aging and to detect common signatures of age-related lung diseases.

衰老是一个自然过程,与器官功能下降和更容易患上慢性病有关。一项基于单细胞类型的系统性研究为了解年龄相关病理背后的机制提供了一个独特的机会。在这里,我们使用单细胞基因表达分析来比较来自不吸烟者的健康年轻和老年人的肺,以研究与年龄相关的转录变化。我们的数据表明,衰老对肺细胞有异质性影响,因为一些群体在转录上更具活力,而另一些群体在老年人中保持稳定。我们发现单核细胞和肺泡巨噬细胞是受转录影响最大的群体。这些变化与炎症和免疫反应的调节有关。此外,我们计算了LungAge评分,该评分揭示了衰老过程中肺细胞类型的多样性。DNA损伤修复、脂肪酸代谢和炎症的变化对年龄预测至关重要。最后,我们量化了衰老肺部的衰老评分,发现更倾向于衰老的细胞是免疫细胞和祖细胞。我们的研究对肺部衰老的分子特征进行了全面而系统的分析。我们的LungAge特征可以用于预测生理衰老的分子特征,并检测与年龄相关的肺部疾病的常见特征。
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引用次数: 1
Erratum to: The variant senescence-associated secretory phenotype induced by centrosome amplification constitutes a pathway that activates hypoxia-inducible factor-1α 勘误表:中心体扩增诱导的变异衰老相关分泌表型构成了激活缺氧诱导因子-1α的途径
IF 7.8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2023-09-11 DOI: 10.1111/acel.13991

Wu, S. K., Ariffin, J., Chian, T. S., & Picone, R. (2023). The variant senescence-associated secretory phenotype induced by centrosome amplification constitutes a pathway that activates hypoxia-inducible factor-1α. Aging Cell, 22, e13766. https://doi.org/10.1111/acel.13766.

In the published version of Wu et al (2023), the current affiliation, Mechanobiology Institute & Department of Biological Sciences, National University of Singapore, Singapore is incorrectly linked to the authors' Juliana Arrifin and Remigio Picone instead of Selwin K. Wu.

The present address should be displayed as follows:

Present address.

Selwin K. Wu, Mechanobiology Institute & Department of Biological Sciences, National University of Singapore, Singapore.

吴,Ariffin,J.,Chian,T.S.,&;Picone,R.(2023)。中心体扩增诱导的变异衰老相关分泌表型构成了激活缺氧诱导因子-1α的途径。衰老细胞,22,e13766。https://doi.org/10.1111/acel.13766.In吴等人(2023)的出版版本,目前所属机构,机械生物学研究所;新加坡国立大学生物科学系被错误地链接到作者的Juliana Arrifin和Remigio Picone,而不是Selwin K.Wu。当前地址应显示如下:当前地址。吴,机械生物学研究所;新加坡国立大学生物科学系。
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引用次数: 0
Epigenomic signature of accelerated ageing in progeroid Cockayne syndrome progeroid-Cokayne综合征加速衰老的表观基因组特征
IF 7.8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2023-09-08 DOI: 10.1111/acel.13959
Clément Crochemore, Claudia Chica, Paolo Garagnani, Giovanna Lattanzi, Steve Horvath, Alain Sarasin, Claudio Franceschi, Maria Giulia Bacalini, Miria Ricchetti

Cockayne syndrome (CS) and UV-sensitive syndrome (UVSS) are rare genetic disorders caused by mutation of the DNA repair and multifunctional CSA or CSB protein, but only CS patients display a progeroid and neurodegenerative phenotype, providing a unique conceptual and experimental paradigm. As DNA methylation (DNAm) remodelling is a major ageing marker, we performed genome-wide analysis of DNAm of fibroblasts from healthy, UVSS and CS individuals. Differential analysis highlighted a CS-specific epigenomic signature (progeroid-related; not present in UVSS) enriched in three categories: developmental transcription factors, ion/neurotransmitter membrane transporters and synaptic neuro-developmental genes. A large fraction of CS-specific DNAm changes were associated with expression changes in CS samples, including in previously reported post-mortem cerebella. The progeroid phenotype of CS was further supported by epigenomic hallmarks of ageing: the prediction of DNAm of repetitive elements suggested an hypomethylation of Alu sequences in CS, and the epigenetic clock returned a marked increase in CS biological age respect to healthy and UVSS cells. The epigenomic remodelling of accelerated ageing in CS displayed both commonalities and differences with other progeroid diseases and regular ageing. CS shared DNAm changes with normal ageing more than other progeroid diseases do, and included genes functionally validated for regular ageing. Collectively, our results support the existence of an epigenomic basis of accelerated ageing in CS and unveil new genes and pathways that are potentially associated with the progeroid/degenerative phenotype.

Cockayne综合征(CS)和紫外线敏感综合征(UVSS)是由DNA修复和多功能CSA或CSB蛋白突变引起的罕见遗传性疾病,但只有CS患者表现出孕激素和神经退行性表型,这提供了一种独特的概念和实验范式。由于DNA甲基化(DNAm)重塑是一个主要的衰老标志物,我们对健康、UVSS和CS个体的成纤维细胞的DNAm进行了全基因组分析。差异分析强调了CS特异性表观基因组特征(与孕激素相关;不存在于UVSS中),其富集于三类:发育转录因子、离子/神经递质膜转运蛋白和突触神经发育基因。CS特异性DNAm的大部分变化与CS样本中的表达变化有关,包括先前报道的死后小脑中的表达改变。CS的孕激素表型得到了衰老的表观遗传学特征的进一步支持:重复元件DNAm的预测表明CS中Alu序列的低甲基化,表观遗传学时钟显示,与健康和UVSS细胞相比,CS生物年龄显著增加。CS加速衰老的表观基因组重塑与其他类激素疾病和正常衰老既有共性,也有差异。CS与正常衰老的DNAm变化比其他类激素疾病更为相似,并且包括功能验证为正常衰老的基因。总之,我们的研究结果支持CS加速衰老的表观基因组基础的存在,并揭示了可能与孕激素/退行性表型相关的新基因和途径。
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Aging Cell
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