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Large-Scale Clustered Transcriptional Silencing Associated With Cellular Senescence.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-19 DOI: 10.1111/acel.70015
Aditi U Gurkar, Satoshi Okawa, Christelle Guillermier, Kritika Chaddha, Matthew L Steinhauser

Senescence is a cell fate associated with age-related pathologies; however, senescence markers are not well-defined. Using single cell multi-isotope imaging mass spectrometry (MIMS), we identified hypercondensed, transcriptionally silent DNA globules in a senescence model induced by dysfunctional telomeres. This architectural phenomenon was associated with geographically clustered transcriptional repression across somatic chromosomes with over-representation of cell cycle genes. Senescence-stimuli was associated with a higher frequency of cells that exhibited geographically concentrated transcriptional repression relative to control cells. This phenomenon was also observed in multiple other senescence models, including replicative senescence and irradiation. We further identified an enrichment of common pathways in all models of senescence, suggesting a common cellular response to this silencing phenomenon. Such large-scale clustered silencing of chromosomal segments rather than individual genes may explain senescence heterogeneity and a putative trajectory toward deep, irreversible senescence.

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引用次数: 0
Activated mTOR Signaling in the RPE Drives EMT, Autophagy, and Metabolic Disruption, Resulting in AMD-Like Pathology in Mice.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-17 DOI: 10.1111/acel.70018
Olivia Chowdhury, Sridhar Bammidi, Pooja Gautam, Vishnu Suresh Babu, Haitao Liu, Peng Shang, Ying Xin, Emma Mahally, Mihir Nemani, Victoria Koontz, Kira Lathrop, Katarzyna M Kedziora, Jonathan Franks, Ming Sun, Joshua W Smith, Lauren R DeVine, Robert N Cole, Nadezda Stepicheva, Anastasia Strizhakova, Sreya Chattopadhyay, Stacey Hose, Jacob Samuel Zigler, José-Alain Sahel, Jiang Qian, Prasun Guha, James T Handa, Sayan Ghosh, Debasish Sinha

The mechanistic target of rapamycin (mTOR) complexes 1 and 2 (mTORC1/2) are crucial for various physiological functions. Although the role of mTORC1 in retinal pigmented epithelium (RPE) homeostasis and age-related macular degeneration (AMD) pathogenesis is established, the function of mTORC2 remains unclear. We investigated both complexes in RPE health and disease. Therefore, in this study, we have attempted to demonstrate that the specific overexpression of mammalian lethal with Sec13 protein 8 (mLST8) in the mouse RPE activates both mTORC1 and mTORC2, inducing epithelial-mesenchymal transition (EMT)-like changes and subretinal/RPE deposits resembling early AMD-like pathogenesis. Aging in these mice leads to RPE degeneration, causing retinal damage, impaired debris clearance, and metabolic and mitochondrial dysfunction. Inhibition of mTOR with TORIN1 in vitro or βA3/A1-crystallin in vivo normalized mTORC1/2 activity and restored function, revealing a novel role for the mTOR complexes in regulating RPE function, impacting retinal health and disease.

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引用次数: 0
The Impact of Toll-Like Receptor 5 on Liver Function in Age-Related Metabolic Disorders.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-17 DOI: 10.1111/acel.70009
Dong-Hyun Kim, Hye Sun Go, Eun Jae Jeon, Thi Quynh Trang Nguyen, Da Yeon Kim, Hansung Park, Hyo-Ji Eom, Sung Young Kim, Sang Chul Park, Kyung A Cho

Toll-like receptor 5 (TLR5) plays a critical role beyond its traditional function in innate immunity, significantly impacting metabolic regulation and liver health. Previously, we reported that TLR5 activation extends the healthspan and lifespan of aging mice. This study demonstrates that TLR5 deficiency leads to pronounced metabolic abnormalities with age, primarily affecting liver metabolic functions rather than intestinal inflammation. Comprehensive RNA sequencing analysis revealed that TLR5 deficiency induces gene expression changes in liver tissue similar to those caused by the methionine-choline deficient (MCD) diet, particularly affecting lipid metabolism and circadian rhythm-related genes. TLR5 knockout (TLR5 KO) mice displayed an increased propensity for liver fibrosis and lipid accumulation under the MCD diet, exacerbating liver pathology. Both hepatocytes and hepatic stellate cells in TLR5 KO mice were functionally impacted, leading to metabolic dysfunction and fibrosis. These findings suggest that TLR5 could be a significant target for addressing metabolic diseases that arise and worsen with aging. Furthermore, understanding the mechanisms by which TLR5 activation extends healthspan could provide valuable insights into therapeutic strategies for enhancing longevity and managing age-related metabolic disorders.

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引用次数: 0
Exploring Lymph Node Stroma Ageing: Immune Implications and Future Directions.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-15 DOI: 10.1111/acel.70000
Yu Yang Ng, Andy Tay

Ageing is an inevitable biological process that impacts the immune system, leading to immunosenescence and inflammaging, which contribute to increased susceptibility to infections, autoimmune diseases and cancers in individuals over the age of 65. This review focuses on the ageing of lymph node stromal cells (LNSCs), which are crucial for maintaining lymph node (LN) structure and function. Age-related changes in LNs, such as fibrosis and lipomatosis, disrupt the LN architecture and reduce immune cell recruitment and function, impairing immune responses to infections and vaccinations. The review discusses the structural and functional decline of various LNSC subsets, including fibroblastic reticular cells (FRCs), lymphatic endothelial cells (LECs) and blood endothelial cells (BECs), highlighting their roles in immune cell activation and homeostasis. Potential strategies to restore aged LNSC function, such as enhancing LNSC activation during vaccination and using senotherapeutics, are explored. Outstanding questions regarding the mechanisms of LNSC ageing and how ageing of the LN stroma might impact autoimmune disorders are also addressed. This review aims to stimulate further research into the characterisation of aged LNSCs and the development of therapeutic interventions to improve immune function in the older adults.

衰老是一个不可避免的生物过程,它会影响免疫系统,导致免疫衰老和炎症老化,从而使 65 岁以上的人更容易感染、患上自身免疫性疾病和癌症。本综述重点探讨淋巴结基质细胞(LNSCs)的衰老问题,淋巴结基质细胞对维持淋巴结(LN)的结构和功能至关重要。淋巴结中与年龄有关的变化,如纤维化和脂肪瘤病,会破坏淋巴结的结构,减少免疫细胞的招募和功能,损害对感染和疫苗接种的免疫反应。这篇综述讨论了各种 LNSC 亚群的结构和功能衰退,包括成纤维网状细胞(FRCs)、淋巴内皮细胞(LECs)和血液内皮细胞(BECs),强调了它们在免疫细胞活化和稳态中的作用。研究还探讨了恢复衰老 LNSC 功能的潜在策略,如在接种疫苗期间增强 LNSC 的活化和使用衰老治疗药物。此外,还探讨了有关 LNSC 衰老机制以及 LN 基质衰老如何影响自身免疫性疾病的未决问题。本综述旨在促进对老化 LNSC 特征的进一步研究,并开发治疗干预措施,以改善老年人的免疫功能。
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引用次数: 0
Enhanced Microglial Engulfment of Dopaminergic Synapses Induces Parkinson's Disease-Related Executive Dysfunction in an Acute LPC Infusion Targeting the mPFC.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-15 DOI: 10.1111/acel.70003
Yehao Liu, Rui Chen, Chunyan Mu, Junjie Diao, Yurong Guo, Xiaoyu Yao, Shijie Shi, Mengying Wang, Zhi Zhang, Xiaoling Qin, Chuanxi Tang

The dysfunction of the dopaminergic projection from the ventral tegmental area (VTA) to the medial prefrontal cortex (mPFC) is believed to play a key role in the pathophysiology of Parkinson's disease (PD) accompanied by executive dysfunction (EDF). In this study, we identified an abnormal increase in lysophosphatidylcholine (LPC) levels in PD patients, which closely correlates with the severity of cognitive impairment. LPC disrupts the miR-2885/TDP-43 signaling pathway in microglia, driving dopaminergic presynaptic engulfment. In LPC-exposed mice, microglial activation via miR-2885/TDP-43/p65 signaling led to inflammatory cytokine and complement release, marking dopaminergic synapses for phagocytosis with a "PS/C1q" signal. Following the inhibition of LPC-induced microglial activation through chemogenetic methods, we observed a significant reduction in the phagocytosis of dopaminergic synapses, resulting in improved executive function. The miR-2885 disrupted LPC-induced dopaminergic phagocytosis and alleviated EDF. Furthermore, the accumulation of excessive TDP-43 due to the loss of miR-2885 promoted the engulfment of dopaminergic synapses by facilitating the entry of p65 into the nucleus. Inhibiting TDP-43 levels effectively mitigated LPC-induced EDF. Additionally, supplementing dopamine receptor agonists enhanced the excitability of regional glutamatergic neurons, leading to improved executive function. In summary, LPC exposure in the mPFC impairs microglial regulation, leading to dopaminergic synaptic loss and underactivity of glutamatergic neurons. These changes drive the development of executive dysfunction in PD.

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引用次数: 0
Transcriptional Heterogeneity and Differential Response of Rod Photoreceptor Pathway Uncovered by Single-Cell RNA Sequencing of the Aging Mouse Retina.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-15 DOI: 10.1111/acel.70001
Laura Campello, Matthew J Brooks, Benjamin R Fadl, Hyo Sub Choi, Soumitra Pal, Anand Swaroop

Visual function deteriorates throughout the natural course of aging. Age-related structural and functional adaptations are observed in the retina, the light-sensitive neuronal tissue of the eye where visual perception begins. Molecular mechanisms underlying retinal aging are still poorly understood, highlighting the need to identify biomarkers for better prognosis and alleviation of aging-associated vision impairment. Here, we investigate dynamics of transcriptional dysregulation in the retina and identify affected pathways within distinct retinal cell types. Using an optimized protocol for single-cell RNA sequencing of mouse retinas at 3, 12, 18, and 24 months, we detect a progressive increase in the number of differentially expressed genes across all retinal cell types. The extent and direction of expression changes varies, with photoreceptor, bipolar, and Müller cells showing the maximum number of differentially expressed genes at all age groups. Furthermore, our analyses uncover transcriptionally distinct, heterogeneous subpopulations of rod photoreceptors and bipolar cells, distributed across distinct areas of the retina. Our findings provide a plausible molecular explanation for enhanced susceptibility of rod cells to aging and correlate with the observed loss of scotopic sensitivity in elderly individuals.

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引用次数: 0
Healthy Aging Metabolomic and Proteomic Signatures Across Multiple Physiological Compartments.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-14 DOI: 10.1111/acel.70014
R Moaddel, J Candia, C Ubaida-Mohien, T Tanaka, A Z Moore, M Zhu, G Fantoni, S Church, J D'Agostino, J Fan, N Shehadeh, S De, E Lehrmann, M Kaileh, E Simonsick, R Sen, J M Egan, L Ferrucci

The study of biomarkers in biofluids and tissues expanded our understanding of the biological processes that drive physiological and functional manifestations of aging. However, most of these studies were limited to examining one biological compartment, an approach that fails to recognize that aging pervasively affects the whole body. The simultaneous modeling of hundreds of metabolites and proteins across multiple compartments may provide a more detailed picture of healthy aging and point to differences between chronological and biological aging. Herein, we report proteomic analyses of plasma and urine collected in healthy men and women, age 22-92 years. Using these data, we developed a series of metabolomic and proteomic predictors of chronological age for plasma, urine, and skeletal muscle. We then defined a biological aging score, which measures the departure between an individual's predicted age and the expected predicted age for that individual based on the full cohort. We show that these predictors are significantly and independently related to clinical phenotypes important for aging, such as inflammation, iron deficiency anemia, muscle mass, and renal and hepatic functions. Despite a different set of selected biomarkers in each compartment, the different scores reflect a similar degree of deviation from healthy aging in single individuals, thus allowing identification of subjects with significant accelerated or decelerated biological aging.

对生物流体和组织中生物标志物的研究拓展了我们对驱动衰老生理和功能表现的生物过程的认识。然而,这些研究大多局限于研究一个生物区室,这种方法没有认识到衰老对整个身体的普遍影响。同时对多个分区的数百种代谢物和蛋白质进行建模,可以更详细地了解健康衰老的情况,并指出计时衰老和生物衰老之间的差异。在此,我们报告了对 22-92 岁健康男性和女性的血浆和尿液进行的蛋白质组分析。利用这些数据,我们为血浆、尿液和骨骼肌制定了一系列预测计时年龄的代谢组学和蛋白质组学指标。然后,我们定义了一个生物老化评分,该评分衡量了个人预测年龄与基于整个队列的个人预期预测年龄之间的偏差。我们的研究表明,这些预测因子与衰老的重要临床表型(如炎症、缺铁性贫血、肌肉质量、肝肾功能)有显著的独立相关性。尽管每个区组所选的生物标志物不同,但不同的分数反映出单个个体偏离健康衰老的程度相似,因此可以识别出生物衰老明显加速或减速的受试者。
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引用次数: 0
Correction to "Targeting miR-124/ Ferroportin Signaling Ameliorated Neuronal Cell Death Through Inhibiting Apoptosis and Ferroptosis in Aged Intracerebral Hemorrhage Murine Model".
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-13 DOI: 10.1111/acel.70006
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引用次数: 0
Unraveling Alveolar Fibroblast and Activated Myofibroblast Heterogeneity and Differentiation Trajectories During Lung Fibrosis Development and Resolution in Young and Old Mice.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-13 DOI: 10.1111/acel.14503
Arun Lingampally, Marin Truchi, Xianrong Shi, Yuqing Zhou, Esmeralda Vasquez-Pacheco, Georgios-Dimitrios Panagiotidis, Stefan Hadzic, Janine Koepke, Ana Ivonne Vazquez-Armendariz, Susanne Herold, Christos Samakovlis, Hector A Cabrera-Fuentes, Xuran Chu, Werner Seeger, Jin-San Zhang, Elie El Agha, Bernard Mari, Saverio Bellusci, Chengshui Chen

Idiopathic pulmonary fibrosis (IPF) is an age-associated disease characterized by the irreversible accumulation of excessive extracellular matrix components by activated myofibroblasts (aMYFs). Following bleomycin administration in young mice, fibrosis formation associated with efficient resolution takes place limiting the clinical relevance of this model for IPF. In this study, we used aged mice in combination with bleomycin administration to trigger enhanced fibrosis formation and delayed resolution as a more relevant model for IPF. Alveolosphere assays were carried out to compare the alveolar resident mesenchymal niche activity for AT2 stem cells in young versus old mice. Lineage tracing of the Acta2+ aMYFs in old mice exposed to bleomycin followed by scRNAseq of the lineage-traced cells isolated during fibrosis formation and resolution was performed to delineate the heterogeneity of aMYFs during fibrosis formation and their fate during resolution. Integration of previously published similar scRNAseq results using young mice was carried out. Our results show that alveolar resident mesenchymal cells from old mice display decreased supporting activity for AT2 stem cells. Our findings suggest that the cellular and molecular mechanisms underlying the aMYFs formation and differentiation towards the Lipofibroblast phenotype are mostly conserved between young and old mice. In addition to persistent fibrotic signaling in aMYF from old mice during resolution, we also identified differences linked to interleukin signaling in old versus young alveolar fibroblast populations before and during bleomycin injury. Importantly, our work confirms the relevance of a subcluster of aMYFs in old mice that is potentially relevant for future management of IPF.

{"title":"Unraveling Alveolar Fibroblast and Activated Myofibroblast Heterogeneity and Differentiation Trajectories During Lung Fibrosis Development and Resolution in Young and Old Mice.","authors":"Arun Lingampally, Marin Truchi, Xianrong Shi, Yuqing Zhou, Esmeralda Vasquez-Pacheco, Georgios-Dimitrios Panagiotidis, Stefan Hadzic, Janine Koepke, Ana Ivonne Vazquez-Armendariz, Susanne Herold, Christos Samakovlis, Hector A Cabrera-Fuentes, Xuran Chu, Werner Seeger, Jin-San Zhang, Elie El Agha, Bernard Mari, Saverio Bellusci, Chengshui Chen","doi":"10.1111/acel.14503","DOIUrl":"https://doi.org/10.1111/acel.14503","url":null,"abstract":"<p><p>Idiopathic pulmonary fibrosis (IPF) is an age-associated disease characterized by the irreversible accumulation of excessive extracellular matrix components by activated myofibroblasts (aMYFs). Following bleomycin administration in young mice, fibrosis formation associated with efficient resolution takes place limiting the clinical relevance of this model for IPF. In this study, we used aged mice in combination with bleomycin administration to trigger enhanced fibrosis formation and delayed resolution as a more relevant model for IPF. Alveolosphere assays were carried out to compare the alveolar resident mesenchymal niche activity for AT2 stem cells in young versus old mice. Lineage tracing of the Acta2+ aMYFs in old mice exposed to bleomycin followed by scRNAseq of the lineage-traced cells isolated during fibrosis formation and resolution was performed to delineate the heterogeneity of aMYFs during fibrosis formation and their fate during resolution. Integration of previously published similar scRNAseq results using young mice was carried out. Our results show that alveolar resident mesenchymal cells from old mice display decreased supporting activity for AT2 stem cells. Our findings suggest that the cellular and molecular mechanisms underlying the aMYFs formation and differentiation towards the Lipofibroblast phenotype are mostly conserved between young and old mice. In addition to persistent fibrotic signaling in aMYF from old mice during resolution, we also identified differences linked to interleukin signaling in old versus young alveolar fibroblast populations before and during bleomycin injury. Importantly, our work confirms the relevance of a subcluster of aMYFs in old mice that is potentially relevant for future management of IPF.</p>","PeriodicalId":119,"journal":{"name":"Aging Cell","volume":" ","pages":"e14503"},"PeriodicalIF":8.0,"publicationDate":"2025-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143404977","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Negative Effect of Gst-35 on the Health Span of Caenorhabditis elegans Through Lysosomal Dysfunction via the Pmk-1 and Skr Genes.
IF 8 1区 医学 Q1 CELL BIOLOGY Pub Date : 2025-02-13 DOI: 10.1111/acel.70016
Yehui Gao, Xinyun Zhang, Congmin Wei, Hongru Lin, Mengchen Wu, Botian Ma, Jinyun Jiang, Shan Li, Hongbing Wang

As global life expectancy increases, the focus has shifted from merely extending lifespan to promoting healthy aging. GSTA1, GSTA2, and GSTA3 (GSTA1-3), members of the alpha class of glutathione S-transferases, are involved in diverse biological processes, including metabolism and immune regulation, highlighting their potential influence on human health span and lifespan. In this study, we employed Caenorhabditis elegans as a model organism to investigate the role of gst-35, an ortholog of mammalian GSTA1-3, in healthy aging. Our results demonstrated that gst-35 overexpression has detrimental effects on multiple physiological functions in nematodes. Specifically, gst-35 overexpression significantly reduced lifespan, impaired development and growth, and substantially diminished reproductive capacity, physical fitness, and stress resistance. In contrast, gst-35 knockout partially enhanced physical fitness and stress resistance. Comprehensive RNA-sequencing transcriptome analysis revealed that gst-35 overexpression disrupted metabolic homeostasis and induced lysosomal dysfunction. These effects were mediated through the activation of the pmk-1 signaling pathway and suppression of skr genes, which collectively impaired healthy aging processes. These findings illuminate the complex role of gst-35 in aging and provide valuable insights into the molecular mechanisms underlying healthy aging, offering potential targets for interventions aimed at promoting health span.

{"title":"Negative Effect of Gst-35 on the Health Span of Caenorhabditis elegans Through Lysosomal Dysfunction via the Pmk-1 and Skr Genes.","authors":"Yehui Gao, Xinyun Zhang, Congmin Wei, Hongru Lin, Mengchen Wu, Botian Ma, Jinyun Jiang, Shan Li, Hongbing Wang","doi":"10.1111/acel.70016","DOIUrl":"https://doi.org/10.1111/acel.70016","url":null,"abstract":"<p><p>As global life expectancy increases, the focus has shifted from merely extending lifespan to promoting healthy aging. GSTA1, GSTA2, and GSTA3 (GSTA1-3), members of the alpha class of glutathione S-transferases, are involved in diverse biological processes, including metabolism and immune regulation, highlighting their potential influence on human health span and lifespan. In this study, we employed Caenorhabditis elegans as a model organism to investigate the role of gst-35, an ortholog of mammalian GSTA1-3, in healthy aging. Our results demonstrated that gst-35 overexpression has detrimental effects on multiple physiological functions in nematodes. Specifically, gst-35 overexpression significantly reduced lifespan, impaired development and growth, and substantially diminished reproductive capacity, physical fitness, and stress resistance. In contrast, gst-35 knockout partially enhanced physical fitness and stress resistance. Comprehensive RNA-sequencing transcriptome analysis revealed that gst-35 overexpression disrupted metabolic homeostasis and induced lysosomal dysfunction. These effects were mediated through the activation of the pmk-1 signaling pathway and suppression of skr genes, which collectively impaired healthy aging processes. These findings illuminate the complex role of gst-35 in aging and provide valuable insights into the molecular mechanisms underlying healthy aging, offering potential targets for interventions aimed at promoting health span.</p>","PeriodicalId":119,"journal":{"name":"Aging Cell","volume":" ","pages":"e70016"},"PeriodicalIF":8.0,"publicationDate":"2025-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143404974","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":1,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Aging Cell
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