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Digest: Whole genomes delimit multiple species of Galapagos giant tortoises.
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-01-13 DOI: 10.1093/evolut/qpaf003
Tabitha R Taberer

Utilising whole genome sequencing and multiple species delimitation models, Gaughran et al. (2024) show support for up to 13 distinct living Galapagos giant tortoise species, in contrast to the current classification of a single species. This result highlights the potential for rapidly radiating organisms on islands to act as model systems for investigating species boundaries, helping to settle taxonomic debates.

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引用次数: 0
Digest: Evolution of dragline silk in araneids show super tensile performance in web-building and non-web-building spiders.
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2025-01-13 DOI: 10.1093/evolut/qpaf002
Snata Chakraborty

Wolff (2024) takes a comparative phylogenetic approach to study the evolution of dragline silk in 164 species of spiders, including both araneid and non-araneid species. Many structural and mechanical properties of dragline silk showed no correlations; however, both tensile strength and toughness correlated with birefringence-an indicator for the directional ordering of protein materials in the silk fibre. These properties do not seem to differ between web-building and non-web-building spiders; many spider families were found to include species that produce super-performing silk as well as species that produce weak-performing silk.

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引用次数: 0
Can sexual conflict drive transitions to asexuality? Female resistance to fertilization in a facultatively parthenogenetic insect.
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-23 DOI: 10.1093/evolut/qpae187
Daniela Wilner, Jigmidmaa Boldbaatar, Soleille M Miller, Nathan W Burke, Russell Bonduriansky

Facultatively parthenogenetic animals could help reveal the role of sexual conflict in the evolution of sex. Although each female can reproduce both sexually (producing sons and daughters from fertilized eggs) and asexually (typically producing only daughters from unfertilized eggs), these animals often form distinct sexual and asexual populations. We hypothesized that asexual populations are maintained through female resistance as well as the decay of male traits. We tested this via experimental crosses between individuals descended from multiple natural sexual and asexual populations of the facultatively parthenogenic stick-insect Megacrania batesii. We found that male-paired females descended from asexual populations produced strongly female-biased offspring sex-ratios resulting from reduced fertilization rates. This effect was not driven by incompatibility between diverged genotypes but, rather, by both genotypic and maternal effects on fertilization rate. Furthermore, when females from asexual populations mated and produced sons, those sons had poor fertilization success when paired with resistant females, consistent with male trait decay. Our results suggest that resistance to fertilization resulting from both maternal and genotypic effects, along with male sexual trait decay, can hinder the invasion of asexual populations by males. Sexual conflict could thus play a role in the establishment and maintenance of asexual populations.

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引用次数: 0
Herbivory and water availability interact to shape the adaptive landscape in the perennial forb, Boechera stricta.
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-23 DOI: 10.1093/evolut/qpae186
M Inam Jameel, Lisa Duncan, Kailen Mooney, Jill T Anderson

Abiotic and biotic factors interact to influence phenotypic evolution; however, identifying the causal agents of selection that drive the evolution and expression of traits remains challenging. In a field common garden, we manipulated water availability and herbivore abundance across three years, and evaluated clinal variation in functional traits and phenology, plasticity, local adaptation, and selection using diverse accessions of the perennial forb, Boechera stricta. Consistent with expectations, drought stress exacerbated damage from herbivores. Foliar traits exhibited greater plasticity than phenological traits, which displayed more consistent genetic clines. Water availability and herbivory interacted to exert selection, even on traits like flowering duration, which showed no clinal variation and limited plasticity. Furthermore, the direction of selection on specific leaf area in response to water availability mirrored the genetic cline and plasticity, suggesting that variation in water levels across the landscape influences the evolution of this trait. Finally, both herbivory and water availability likely contribute to local adaptation. This work emphasizes the additive and synergistic roles of abiotic and biotic factors in shaping phenotypic variation across environmental gradients.

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引用次数: 0
Genome-wide differentiation by geography not species in taxonomically complex eyebrights (Euphrasia).
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-23 DOI: 10.1093/evolut/qpae185
Yanqian Ding, Chris Metherell, Wu Huang, Peter M Hollingsworth, Alex D Twyford

Most studies investigating the genomic nature of species differences anticipate monophyletic species with genome-wide differentiation. However, this may not be the case at the earliest stages of speciation where reproductive isolation is weak and homogenising gene flow blurs species boundaries. We investigate genomic differences between species in a postglacial radiation of eyebrights (Euphrasia), a taxonomically complex plant group with variation in ploidy and mating system. We use genotyping-by-sequencing and spatially-aware clustering methods to investigate genetic structure across 378 populations from 18 British and Irish Euphrasia species. We find only northern Scottish populations of the selfing heathland specialist E. micrantha demonstrate genome-wide divergence from other species. Instead of genetic clusters corresponding to species, all other clusters align with geographic regions, such as a genetic cluster on Shetland that includes ten tetraploid species. Recent divergence and extensive gene flow between putative species is supported by a lack of species-specific SNPs or clear outlier loci. We anticipate a similar lack of association between genomic clusters and species identities may occur in other recent postglacial groups. Where new species emerge this is associated with a transition in mating system or novel ecological preferences.

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引用次数: 0
Beyond Peto's paradox: expanding the study of cancer resistance across species. 超越佩托悖论:拓展跨物种抗癌研究。
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-22 DOI: 10.1093/evolut/qpae158
Antoine M Dujon, Amy M Boddy, Rodrigo Hamede, Beata Ujvari, Frédéric Thomas

Peto's paradox, which highlights the lower-than-expected cancer rates in larger and/or longer-lived species, is a cornerstone of discussions at the intersection of ecology, evolution, and cancer research. It prompts investigations into how species with traits that theoretically increase cancer risk manage to exhibit cancer resistance, with the ultimate goal of uncovering novel therapies for humans. Building on these foundational insights, we propose expanding the research focus to species that, despite possessing traits beyond size and longevity that theoretically increase their cancer risk, exhibit unexpected cancer resistance. Testing Peto's paradox without interference from transient dynamics also requires considering species that are at an equilibrium between cancer risks and defenses, which is increasingly challenging due to anthropogenic activities. Additionally, we argue that transmissible cancers could significantly help in understanding how the metastatic process might be naturally suppressed. This research perspective is timely and aims to support the continued and in-depth identification of anti-cancer adaptations retained throughout evolution in the animal kingdom.

佩托悖论强调大型和/或长寿物种的癌症发病率低于预期,是生态学、进化论和癌症研究交叉领域讨论的基石。它促使人们研究那些具有理论上会增加患癌风险的特征的物种是如何表现出抗癌能力的,最终目的是为人类找到新的疗法。在这些基础性见解的基础上,我们建议将研究重点扩大到那些尽管拥有除体型和寿命之外的其他特征,理论上会增加其癌症风险,但却表现出意想不到的抗癌能力的物种。要在不受瞬时动态干扰的情况下检验佩托悖论,还需要考虑那些处于癌症风险与抗癌能力之间平衡状态的物种,而由于人类活动的影响,这种平衡状态正变得越来越具有挑战性。此外,我们还认为,可传播的癌症可以极大地帮助我们理解转移过程是如何被自然抑制的。这一研究视角非常及时,旨在支持对动物界进化过程中保留的抗癌适应性进行持续深入的鉴定。
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引用次数: 0
Allometric scaling of somatic mutation and epimutation rates in trees. 树木中体细胞突变率和表观突变率的异速缩放。
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-22 DOI: 10.1093/evolut/qpae150
Frank Johannes

How long-lived trees escape "mutational meltdown" despite centuries of continuous growth remains puzzling. Here we integrate recent studies to show that the yearly rate of somatic mutations and epimutations (μY) scales inversely with generation time (G), and follows the same allometric power law found in mammals (μY ∝ G-1). Deeper insights into the scaling function may permit predictions of somatic (epi)mutation rates from life-history traits without the need for genomic data.

长寿树如何在数百年的持续生长过程中逃脱 "突变崩溃 "的命运仍然令人费解。在这里,我们综合最近的研究表明,体细胞突变和外显子突变的年率(μY)与世代时间(G)成反比,并且与哺乳动物中发现的异速幂律(μY∝G-1)相同。深入了解该缩放函数,就可以预测生命史性状的体细胞(外)突变率,而无需基因组数据。
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引用次数: 0
Evolution and functional implications of stinger shape in ants. 蚂蚁毒刺形状的进化和功能影响。
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-22 DOI: 10.1093/evolut/qpae142
Alexandre Casadei-Ferreira, Gabriela Procópio Camacho, Thomas van de Kamp, John E Lattke, Rodrigo Machado Feitosa, Evan P Economo

Trait diversification is often driven by underlying performance tradeoffs in the context of different selective pressures. Evolutionary changes in task specialization may influence how species respond to tradeoffs and alter diversification. We conducted this study to investigate the functional morphology, evolutionary history, and tempo and mode of evolution of the Hymenoptera stinger using Ectatomminae ants as a model clade. We hypothesized that a performance tradeoff surface underlies the diversity of stinger morphology and that shifts between predatory and omnivorous diets mediate the diversification dynamics of the trait. Shape variation was characterized by X-ray microtomography, and the correlation between shape and average values of von Mises stress, as a measure of yield failure criteria under loading conditions typical of puncture scenarios, was determined using finite element analysis. We observed that stinger elongation underlies most of the shape variation but found no evidence of biomechanical tradeoffs in the performance characteristics measured. In addition, omnivores have increased phenotypic shifts and accelerated evolution in performance metrics, suggesting the evolution of dietary flexibility releases selection pressure on a specific function, resulting in a greater phenotypic evolutionary rate. These results increase our understanding of the biomechanical basis of stinger shape, indicate that shape diversity is not the outcome of simple biomechanical optimization, and reveal connections between diet and trait diversification.

性状多样化通常是由不同选择压力下的潜在性能权衡驱动的。任务专业化的进化变化可能会影响物种如何应对权衡并改变多样化。我们进行了这项研究,以外蚁目蚂蚁为模式支系,调查膜翅目螫针的功能形态、进化历史、进化速度和模式。我们假设,螫针形态多样性的基础是一种性能权衡表面,而捕食性和杂食性之间的转变介导了该性状的多样化动态。我们用 X 射线显微层析技术描述了毒刺的形状变化,并用有限元分析确定了毒刺形状与 von Mises 应力平均值之间的相关性。我们观察到,毒刺的伸长是大部分形状变化的基础,但在测量的性能特征中没有发现生物力学折衷的证据。此外,杂食动物的表型变化增加,性能指标的进化加快,这表明饮食灵活性的进化释放了对特定功能的选择压力,导致表型进化速度加快。这些结果增加了我们对毒刺形状的生物力学基础的了解,表明形状多样性不是简单的生物力学优化的结果,并揭示了饮食与性状多样性之间的联系。
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引用次数: 0
Sperm competition intensity shapes divergence in both sperm morphology and reproductive genes across murine rodents. 精子竞争强度决定了啮齿类动物精子形态和生殖基因的差异。
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-22 DOI: 10.1093/evolut/qpae146
Emily E K Kopania, Gregg W C Thomas, Carl R Hutter, Sebastian M E Mortimer, Colin M Callahan, Emily Roycroft, Anang S Achmadi, William G Breed, Nathan L Clark, Jacob A Esselstyn, Kevin C Rowe, Jeffrey M Good

It remains unclear how variation in the intensity of sperm competition shapes phenotypic and molecular evolution across clades. Mice and rats in the subfamily Murinae are a rapid radiation exhibiting incredible diversity in sperm morphology and production. We combined phenotypic and genomic data to perform phylogenetic comparisons of male reproductive traits and genes across 78 murine species. We identified several shifts towards smaller relative testes mass (RTM), presumably reflecting reduced sperm competition. Several sperm traits were associated with RTM, suggesting that mating system evolution selects for convergent suites of traits related to sperm competitive ability. We predicted that sperm competition would also drive more rapid molecular divergence in species with large testes. Contrary to this, we found that many spermatogenesis genes evolved more rapidly in species with smaller RTM due to relaxed purifying selection. While some reproductive genes evolved rapidly under recurrent positive selection, relaxed selection played a greater role in underlying rapid evolution in small testes species. Our work demonstrates that postcopulatory sexual selection can impose strong purifying selection shaping the evolution of male reproduction and that broad patterns of molecular evolution may help identify genes that contribute to male fertility.

精子竞争强度的变化如何影响各支系的表型和分子进化,目前仍不清楚。鼠亚科的小鼠和大鼠是一种快速辐射动物,在精子形态和产生方面表现出惊人的多样性。我们结合表型和基因组数据,对 78 种鼠科动物的雄性生殖特征和基因进行了系统进化比较。我们发现了几种睾丸相对质量较小的变化,这可能反映了精子竞争的减少。一些精子性状与相对睾丸质量相关,这表明交配系统的进化选择了与精子竞争能力相关的趋同性状。我们预测精子竞争也会促使睾丸大的物种出现更快的分子分化。与此相反,我们发现,在相对睾丸质量较小的物种中,许多精子发生基因的进化速度更快,这是由于放松了纯化选择。虽然一些生殖基因在经常性的正选择下快速进化,但在睾丸较小的物种中,松弛选择在快速进化中发挥了更大的作用。我们的研究表明,繁殖后的性选择可以施加强烈的净化选择,从而影响雄性生殖的进化,而分子进化的广泛模式可能有助于识别有助于雄性生育能力的基因。
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引用次数: 0
Contrasting macroevolutionary patterns in pelagic tetrapods across the Triassic-Jurassic transition. 三叠纪-侏罗纪过渡时期浮游四足动物的宏观进化模式对比。
IF 3.1 2区 环境科学与生态学 Q2 ECOLOGY Pub Date : 2024-12-22 DOI: 10.1093/evolut/qpae138
Antoine Laboury, Thomas L Stubbs, Andrzej S Wolniewicz, Jun Liu, Torsten M Scheyer, Marc E H Jones, Valentin Fischer

The iconic marine raptorial predators Ichthyosauria and Eosauropterygia co-existed in the same ecosystems throughout most of the Mesozoic Era, facing similar evolutionary pressures and environmental perturbations. Both groups seemingly went through a massive macroevolutionary bottleneck across the Triassic-Jurassic (T/J) transition that greatly reduced their morphological diversity, leaving pelagic lineages as the only survivors. However, analyses of marine reptile disparity across the T/J transition have usually employed coarse morphological and temporal data. We comprehensively compare the evolution of ichthyosaurian and eosauropterygian morphology and body size across the Middle Triassic to Early Jurassic interval and find contrasting macroevolutionary patterns. The ecomorphospace of eosauropterygians predominantly reflects a strong phylogenetic signal, resulting in the clustering of three clades with clearly distinct craniodental phenotypes, suggesting "leaps" toward novel feeding ecologies. Ichthyosaurian diversification lacks a discernible evolutionary trend, as we find evidence for a wide overlap of craniodental morphologies between Triassic and Early Jurassic forms. The temporal evolution of ecomorphological disparity, fin shape and body size of eosauropterygians and ichthyosaurians during the Late Triassic does not support the hypothesis of an abrupt macroevolutionary bottleneck near the T/J transition. Rather, an important turnover event should be sought earlier, during times of rapid sea level falls.

在中生代的大部分时间里,标志性的海洋猛禽掠食者鱼龙亚科(Ichthyosauria)和鱼龙亚科(Eosauropterygia)共存于相同的生态系统中,面临着相似的进化压力和环境干扰。在三叠纪-侏罗纪(T/J)过渡期,这两个类群似乎都经历了一次大规模的进化瓶颈期,形态多样性大大降低,只有浮游类系幸存下来。然而,对三叠纪-侏罗纪过渡时期海洋爬行动物差异的分析通常采用粗略的形态和时间数据。我们全面比较了三叠纪中期到侏罗纪早期鱼龙类和伊索龙类形态和体型的演化,发现了截然不同的宏观演化模式。鱼龙类的生态形态空间主要反映了强烈的系统发育信号,导致三个支系聚集在一起,具有明显不同的颅齿表型,这表明鱼龙类 "飞跃 "到了新的觅食生态环境。鱼龙类的多样化缺乏明显的演化趋势,因为我们发现三叠纪和早侏罗世鱼龙类的颅齿形态有很大的重叠。在晚三叠世,无尾龙类和鱼龙类的非形态差异、鳍状和体型的时间演化并不支持在T/J过渡附近出现一个突然的宏观演化瓶颈的假说。相反,在海平面急剧下降时期,一个重要的更替事件应该出现在更早的时期。
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引用次数: 0
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Evolution
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