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Issue information – TOC & Editorial and Subscription Page 发行信息- TOC &编辑和订阅页
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-05-14 DOI: 10.1111/ede.12405
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引用次数: 0
Direct observation of the evolution of cell-type-specific microRNA expression signatures supports the hematopoietic origin model of endothelial cells 直接观察细胞类型特异性microRNA表达特征的进化支持内皮细胞造血起源模型
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-05-08 DOI: 10.1111/ede.12438
Ana E. Jenike, Katharine M. Jenike, Kevin J. Peterson, Bastian Fromm, Marc K. Halushka

The evolution of specialized cell-types is a long-standing interest of biologists, but given the deep time-scales very difficult to reconstruct or observe. microRNAs have been linked to the evolution of cellular complexity and may inform on specialization. The endothelium is a vertebrate-specific specialization of the circulatory system that enabled a critical new level of vasoregulation. The evolutionary origin of these endothelial cells is unclear. We hypothesized that Mir-126, an endothelial cell-specific microRNA may be informative. We here reconstruct the evolutionary history of Mir-126. Mir-126 likely appeared in the last common ancestor of vertebrates and tunicates, which was a species without an endothelium, within an intron of the evolutionary much older EGF Like Domain Multiple (Egfl) locus. Mir-126 has a complex evolutionary history due to duplications and losses of both the host gene and the microRNA. Taking advantage of the strong evolutionary conservation of the microRNA among Olfactores, and using RNA in situ hybridization, we localized Mir-126 in the tunicate Ciona robusta. We found exclusive expression of the mature Mir-126 in granular amebocytes, supporting a long-proposed scenario that endothelial cells arose from hemoblasts, a type of proto-endothelial amoebocyte found throughout invertebrates. This observed change of expression of Mir-126 from proto-endothelial amoebocytes in the tunicate to endothelial cells in vertebrates is the first direct observation of the evolution of a cell-type in relation to microRNA expression indicating that microRNAs can be a prerequisite of cell-type evolution.

特化细胞类型的进化是生物学家长期感兴趣的问题,但由于时间尺度太长,很难重建或观察。microRNAs与细胞复杂性的进化有关,并可能为专业化提供信息。内皮是一种脊椎动物特有的循环系统的特化,它使血管调节达到了一个关键的新水平。这些内皮细胞的进化起源尚不清楚。我们假设内皮细胞特异性microRNA Mir-126可能提供信息。我们在此重建Mir-126的进化史。Mir-126可能出现在脊椎动物和被囊动物的最后一个共同祖先中,这是一个没有内皮的物种,在进化的更古老的EGF样结构域多位点(Egfl)的内含子中。由于宿主基因和microRNA的重复和丢失,Mir-126具有复杂的进化史。利用microRNA在嗅觉因子中较强的进化保守性,利用RNA原位杂交技术,我们将Mir-126定位在被囊植物琼脂(Ciona robusta)中。我们发现成熟的Mir-126在颗粒状变形虫细胞中独家表达,这支持了一个长期提出的观点,即内皮细胞起源于造血细胞,一种在无脊椎动物中发现的原内皮变形虫细胞。这一观察到的Mir-126从被囊动物的原内皮变形虫细胞到脊椎动物内皮细胞的表达变化是第一次直接观察到一种细胞类型的进化与microRNA表达的关系,表明microRNA可能是细胞类型进化的先决条件。
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引用次数: 1
Phoronida—A small clade with a big role in understanding the evolution of lophophorates 噬菌目--一个小支系,但在了解噬孔动物的进化过程中发挥着重要作用。
IF 2.6 3区 生物学 Q2 DEVELOPMENTAL BIOLOGY Pub Date : 2023-04-29 DOI: 10.1111/ede.12437
Ludwik Gąsiorowski

Phoronids, together with brachiopods and bryozoans, form the animal clade Lophophorata. Modern lophophorates are quite diverse—some can biomineralize while others are soft-bodied, they could be either solitary or colonial, and they develop through various eccentric larval stages that undergo different types of metamorphoses. The diversity of this clade is further enriched by numerous extinct fossil lineages with their own distinct body plans and life histories. In this review, I discuss how data on phoronid development, genetics, and morphology can inform our understanding of lophophorate evolution. The actinotrocha larvae of phoronids is a well documented example of intercalation of the new larval body plan, which can be used to study how new life stages emerge in animals with biphasic life cycle. The genomic and embryonic data from phoronids, in concert with studies of the fossil lophophorates, allow the more precise reconstruction of the evolution of lophophorate biomineralization. Finally, the regenerative and asexual abilities of phoronids can shed new light on the evolution of coloniality in lophophorates. As evident from those examples, Phoronida occupies a central role in the discussion of the evolution of lophophorate body plans and life histories.

噬孔动物与腕足动物和岩虫一起组成了噬孔动物支系。现代栉孔动物种类繁多--有的可以生物矿化,有的则是软体动物,它们可以是单生的,也可以是群生的,而且它们的幼虫发育阶段各不相同,会经历不同类型的变态。这一支系的多样性因众多已灭绝的化石种系而进一步丰富,这些化石种系具有各自不同的身体结构和生活史。在这篇综述中,我将讨论有关噬虫目发育、遗传学和形态学的数据如何帮助我们理解噬虫目的进化。法氏囊虫的actinotrocha幼虫是一个有据可查的新幼虫体型穿插实例,可用于研究具有双相生命周期的动物如何出现新的生命阶段。噬虫目动物的基因组和胚胎数据与对化石噬虫目动物的研究相结合,可以更精确地重建噬虫目动物生物矿化的演化过程。最后,噬菌体的再生能力和无性生殖能力可以为嗜叶虫的集落演化提供新的启示。从这些例子中可以看出,噬菌体在讨论噬菌体身体计划和生活史的进化中占据着核心地位。
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引用次数: 0
Toward a universal measure of robustness across model organs and systems 对整个模型器官和系统的稳健性的普遍测量。
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-04-18 DOI: 10.1111/ede.12436
Jukka Jernvall, Nicolas Di-Poï, Marja L. Mikkola, Claudius F. Kratochwil

The development of an individual must be capable of resisting the harmful effects of internal and external perturbations. This capacity, called robustness, can make the difference between normal variation and disease. Some systems and organs are more resilient in their capacity to correct the effects of internal disturbances such as mutations. Similarly, organs and organisms differ in their capacity to be resilient against external disturbances, such as changes in temperature. Furthermore, all developmental systems must be somewhat flexible to permit evolutionary change, and understanding robustness requires a comparative framework. Over the last decades, most research on developmental robustness has been focusing on specific model systems and organs. Hence, we lack tools that would allow cross-species and cross-organ comparisons. Here, we emphasize the need for a uniform framework to experimentally test and quantify robustness across study systems and suggest that the analysis of fluctuating asymmetry might be a powerful proxy to do so. Such a comparative framework will ultimately help to resolve why and how organs of the same and different species differ in their sensitivity to internal (e.g., mutations) and external (e.g., temperature) perturbations and at what level of biological organization buffering capacities exist and therefore create robustness of the developmental system.

个人的发展必须能够抵抗内部和外部扰动的有害影响。这种被称为健壮性的能力可以区分正常变异和疾病。一些系统和器官在纠正内部干扰(如突变)的影响方面更具弹性。同样,器官和生物体在抵御外部干扰(如温度变化)的能力上也存在差异。此外,所有的发展系统都必须具有一定的灵活性,以允许进化变化,而理解健壮性需要一个比较的框架。在过去的几十年里,大多数关于发育稳健性的研究都集中在特定的模型系统和器官上。因此,我们缺乏能够进行跨物种和跨器官比较的工具。在这里,我们强调需要一个统一的框架来实验测试和量化研究系统的稳健性,并建议对波动不对称的分析可能是一个强有力的代理。这样一个比较框架将最终有助于解决相同和不同物种的器官对内部(例如,突变)和外部(例如,温度)扰动的敏感性为何和如何不同,以及在何种程度上存在生物组织缓冲能力,从而创造发育系统的稳健性。
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引用次数: 1
Ontogenetic trajectories and early shape differentiation of treehopper pronota (Hemiptera: Membracidae) 圆翅树蛉的个体发育轨迹及早期形态分化(半翅目:膜蛉科)
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-04-10 DOI: 10.1111/ede.12431
Anna M. Kudla, Ximena Miranda, H. Frederik Nijhout

Membracids (family: Membracidae), commonly known as treehoppers, are recognizable by their enlarged and often elaborated pronota. Much of the research investigating the development and evolution of this structure has focused on the fifth instar to adult transition, in which the pronotum undergoes the largest transformation as it takes on adult identity. However, little is known about the earlier nymphal stages, the degree to which the pronotum develops at these timepoints, and how development has changed relative to the ancestral state. Here, we studied the nymphal stages and adults of five morphologically distinct membracid species and of Aetalion reticulatum (family: Aetalionidae), the outgroup which was used as an ancestral state proxy. We found that shape differentiation in the pronotum of membracids can start as early as the second instar stage. Most shape differentiation occurs within the nymphal stages and not in the embryo since the shape of the first-instar pronotum did not differ from the outgroup species in all but one species we investigated. We found the anterior–posterior axis of the pronotum elongated at a faster relative rate in membracid species than in A. reticulatum, which contributed to the development of exaggerated pronotal size. Finally, we found differences in the morphogenesis of shape across species. We suggest this is due to the developmental and evolutionary divergence of differential growth patterning of the dorsal surface of the pronotum, not only across species, but also between stages within the same species. This lability may contribute to the evolvability and diversification of the membracid pronotum.

膜蜂(科:膜蜂科),通常被称为树跳虫,通过它们扩大和经常精心制作的前喙来识别。许多调查这一结构的发展和演变的研究都集中在第5个阶段到成人阶段的过渡上,在这个阶段,前前额经历了最大的转变,因为它承担了成人的身份。然而,人们对早期的若虫阶段知之甚少,在这些时间点上前角发育的程度,以及相对于祖先状态的发育是如何变化的。本文研究了5种形态不同的膜类昆虫和作为祖先状态代理的外群——网状Aetalion reticulatum(科:Aetalionidae)的若虫期和成虫期。我们发现,早在二星阶段,膜前部的形状分化就开始了。大多数形状分化发生在若虫阶段,而不是在胚胎阶段,因为除了我们调查的一个物种外,所有物种的一龄前角形状与外群物种没有差异。我们发现,在膜类物种中,前后轴的相对伸长速度要快于网纹刺槐,这导致了前额大小的扩大。最后,我们发现了不同物种之间形状形态发生的差异。我们认为,这是由于前背表面的不同生长模式的发育和进化差异,不仅在物种之间,而且在同一物种的不同阶段。这种不稳定性可能有助于膜前角的进化和多样化。
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引用次数: 1
Promises and limits of an agency perspective in evolutionary developmental biology 进化发育生物学中代理视角的前景与局限。
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-04-10 DOI: 10.1111/ede.12432
Erica M. Nadolski, Armin P. Moczek

An agent-based perspective in the study of complex systems is well established in diverse disciplines, yet is only beginning to be applied to evolutionary developmental biology. In this essay, we begin by defining agency and associated terminology formally. We then explore the assumptions and predictions of an agency perspective, apply these to select processes and key concept areas relevant to practitioners of evolutionary developmental biology, and consider the potential epistemic roles that an agency perspective might play in evo devo. Throughout, we discuss evidence supportive of agential dynamics in biological systems relevant to evo devo and explore where agency thinking may enrich the explanatory reach of research efforts in evolutionary developmental biology.

在复杂系统的研究中,基于主体的观点已经在不同的学科中得到了很好的建立,但在进化发育生物学中的应用才刚刚开始。在本文中,我们从正式定义代理和相关术语开始。然后,我们探讨了代理视角的假设和预测,将其应用于与进化发育生物学实践者相关的选择过程和关键概念领域,并考虑代理视角在进化发展中可能发挥的潜在认知作用。在整个过程中,我们讨论了与进化相关的生物系统中支持代理动力学的证据,并探索了代理思维可以丰富进化发育生物学研究工作的解释范围。
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引用次数: 3
Developing the genotype-to-phenotype relationship in evolutionary theory: A primer of developmental features 进化理论中基因型-表型关系的发展:发育特征的入门。
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-04-07 DOI: 10.1111/ede.12434
Emilie C. Snell-Rood, Sean M. Ehlman

For decades, there have been repeated calls for more integration across evolutionary and developmental biology. However, critiques in the literature and recent funding initiatives suggest this integration remains incomplete. We suggest one way forward is to consider how we elaborate the most basic concept of development, the relationship between genotype and phenotype, in traditional models of evolutionary processes. For some questions, when more complex features of development are accounted for, predictions of evolutionary processes shift. We present a primer on concepts of development to clarify confusion in the literature and fuel new questions and approaches. The basic features of development involve expanding a base model of genotype-to-phenotype to include the genome, space, and time. A layer of complexity is added by incorporating developmental systems, including signal-response systems and networks of interactions. The developmental emergence of function, which captures developmental feedbacks and phenotypic performance, offers further model elaborations that explicitly link fitness with developmental systems. Finally, developmental features such as plasticity and developmental niche construction conceptualize the link between a developing phenotype and the external environment, allowing for a fuller inclusion of ecology in evolutionary models. Incorporating aspects of developmental complexity into evolutionary models also accommodates a more pluralistic focus on the causal importance of developmental systems, individual organisms, or agents in generating evolutionary patterns. Thus, by laying out existing concepts of development, and considering how they are used across different fields, we can gain clarity in existing debates around the extended evolutionary synthesis and pursue new directions in evolutionary developmental biology. Finally, we consider how nesting developmental features in traditional models of evolution can highlight areas of evolutionary biology that need more theoretical attention.

几十年来,不断有人呼吁在进化生物学和发育生物学之间进行更多的整合。然而,文献中的批评和最近的资助计划表明,这种整合仍然不完整。我们建议一个前进的方向是考虑我们如何阐述最基本的发展概念,基因型和表型之间的关系,在传统的进化过程模型。对于某些问题,当考虑到更复杂的发展特征时,对进化过程的预测就会发生变化。我们提出了一个关于发展概念的入门,以澄清文献中的混乱,并推动新的问题和方法。发育的基本特征涉及扩展基因型到表型的基本模型,以包括基因组、空间和时间。通过整合发展系统,包括信号响应系统和相互作用网络,增加了一层复杂性。功能的发育出现,捕捉了发育反馈和表型表现,提供了进一步的模型阐述,明确地将适应性与发育系统联系起来。最后,可塑性和发育生态位构建等发育特征将发育表型与外部环境之间的联系概念化,从而允许在进化模型中更充分地包含生态学。将发育复杂性的各个方面纳入进化模型,也有利于对发育系统、个体生物或产生进化模式的动因的因果重要性进行更多元的关注。因此,通过列出现有的发展概念,并考虑它们如何在不同领域中使用,我们可以明确围绕扩展进化综合的现有争论,并在进化发育生物学中寻求新的方向。最后,我们考虑了传统进化模型中的筑巢发育特征如何突出进化生物学中需要更多理论关注的领域。
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引用次数: 1
Cranial cartilages: Players in the evolution of the cranium during evolution of the chordates in general and of the vertebrates in particular 颅软骨:在脊索动物和脊椎动物的进化过程中,在头盖骨的进化中起着重要的作用
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-03-22 DOI: 10.1111/ede.12433
Takayuki Onai, Toshihiro Aramaki, Akira Takai, Kisa Kakiguchi, Shigenobu Yonemura

The present contribution is chiefly a review, augmented by some new results on amphioxus and lamprey anatomy, that draws on paleontological and developmental data to suggest a scenario for cranial cartilage evolution in the phylum chordata. Consideration is given to the cartilage-related tissues of invertebrate chordates (amphioxus and some fossil groups like vetulicolians) as well as in the two major divisions of the subphylum Vertebrata (namely, agnathans, and gnathostomes). In the invertebrate chordates, which can be considered plausible proxy ancestors of the vertebrates, only a viscerocranium is present, whereas a neurocranium is absent. For this situation, we examine how cartilage-related tissues of this head region prefigure the cellular cartilage types in the vertebrates. We then focus on the vertebrate neurocranium, where cyclostomes evidently lack neural-crest derived trabecular cartilage (although this point needs to be established more firmly). In the more complex gnathostome, several neural-crest derived cartilage types are present: namely, the trabecular cartilages of the prechordal region and the parachordal cartilage the chordal region. In sum, we present an evolutionary framework for cranial cartilage evolution in chordates and suggest aspects of the subject that should profit from additional study.

本文主要综述了文昌鱼和七鳃鳗解剖学上的一些新结果,并利用古生物学和发育数据提出了脊索动物门颅软骨进化的设想。考虑到脊索类无脊椎动物(文文鱼和一些化石类群,如vetulicolians)的软骨相关组织以及脊椎动物亚门的两个主要分支(即agnathans和gnathostomes)。无脊椎脊索动物可以被认为是脊椎动物的代祖先,但只有内脏头盖骨存在,而没有神经头盖骨。在这种情况下,我们研究这个头部区域的软骨相关组织如何预示脊椎动物的细胞软骨类型。然后我们将重点放在脊椎动物的神经头盖骨上,其中的环口明显缺乏神经嵴衍生的小梁软骨(尽管这一点需要更牢固地建立)。在更复杂的颌口,存在几种神经嵴衍生的软骨类型:即脊索前区的小梁软骨和脊索区的副索软骨。总之,我们提出了脊索动物颅软骨进化的进化框架,并提出了应该从额外研究中获益的主题方面。
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引用次数: 0
Issue information – TOC & Editorial and Subscription Page 问题信息-目录和编辑与订阅页面
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-03-11 DOI: 10.1111/ede.12404
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引用次数: 0
Calvarial suture interdigitation in hadrosaurids (Ornithischia: Ornithopoda): Perspectives through ontogeny and evolution 鸭嘴龙颅骨缝线间指:个体发育和进化的观点
IF 2.9 3区 生物学 Q1 Agricultural and Biological Sciences Pub Date : 2023-03-10 DOI: 10.1111/ede.12430
Thomas W. Dudgeon, David C. Evans

Lambeosaurine hadrosaurids exhibited extreme modifications to the skull, where the premaxillae, nasals, and prefrontals were modified to form their iconic supracranial crests. This morphology contrasts with their sister group, Hadrosaurinae, which possessed the plesiomorphic arrangement of bones. Although studies have discussed differences between lambeosaurine and hadrosaurine skull morphology and ontogeny, there is little information detailing suture modifications through ontogeny and evolution. Suture morphology is of particular interest due to its correlation with the mechanical loading of the skull in extant vertebrates. We quantify and contrast the morphology of calvarial sutures in iguanodontians and ontogenetic series of Corythosaurus and Gryposaurus to test whether the evolution of lambeosaurine crests impacted the mechanical loading of the skull. We found that suture interdigitation (SI) increases through ontogeny in hadrosaurids, although this increase is more extreme in Corythosaurus than Gryposaurus, and overall suture complexity (i.e., overall shape) remained constant. Lambeosaurines also have higher SI than other iguanodontians, even in crestless juveniles, suggesting that increased sinuosity is unrelated to the structural support of the crest. Hadrosaurines and basal iguanodontians did not differ. Similarly, lambeosaurines have more complexly shaped sutures than hadrosaurines and basal iguanodontians, while the latter two groups do not differ. Taken together, these results suggest that lambeosaurine calvarial sutures are more interdigitated than other iguanodontians, and although suture sinuosity increased through ontogeny, the suture shape remained constant. These ontogenetic and evolutionary patterns suggest that increased suture complexity in lambeosaurines coincided with crest evolution, and corresponding modifications to their facial skeleton altered the distribution of stress while feeding.

朗伯龙鸭嘴龙的头骨发生了极端的变化,其中前颌、鼻和前额骨发生了变化,形成了标志性的颅上嵴。这种形态与它们的姐妹类群——鸭嘴龙形成了对比,鸭嘴龙的骨骼排列是似形的。虽然研究讨论了lambeosaurus和hadrosaurus颅骨形态和个体发生的差异,但很少有关于个体发生和进化中缝合修饰的信息。缝线形态是特别感兴趣的,因为它与现有脊椎动物颅骨的机械负荷有关。我们量化并对比了禽龙和冠龙、鹰头龙的颅骨缝合线形态,以测试lambeosaurus冠的进化是否会影响颅骨的机械载荷。我们发现,在鸭嘴龙中,缝合指间性(SI)通过个体发育而增加,尽管冠龙的这种增加比Gryposaurus更为极端,但总体缝合复杂性(即整体形状)保持不变。Lambeosaurines的SI也高于其他禽龙类,即使在没有冠的幼兽中也是如此,这表明增加的弯曲度与冠的结构支撑无关。鸭嘴龙类和基禽龙类没有差异。同样,lambeosaurines的缝合线形状比hadrosaurus和basal禽龙类更复杂,而后两类没有区别。综上所述,这些结果表明lambeosaurus颅骨缝线比其他禽龙更具有交叉指状,尽管缝线的弯曲度随着个体发育而增加,但缝线的形状保持不变。这些个体发生和进化模式表明,骨缝复杂性的增加与嵴进化相一致,其面部骨骼的相应变化改变了进食时的应力分布。
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引用次数: 0
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Evolution & Development
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