Imam Bachtiar, T. A. Hadi, Karnan Karnan, Naila Taslimah Bachtiar
Coral reef fisheries are prominent for the archipelagic countries’ food sufficiency and security. Studies showed that fish abundance and biomass are affected by biophysical variables. The present study determines which biophysical variables are important predictors of fish diversity, abundance, and biomass. The study used available monitoring data from the Indonesian Research Center for Oceanography, the National Board for Research and Innovation. Data were collected from 245 transects in 19 locations distributed across the Indonesian Archipelago, including the eastern Indian Ocean, Sunda Shelf (Karimata Sea), Wal-lacea (Flores and Banda Seas), and the western Pacific Ocean. Principal component analysis and multiple regression model were administered to 13 biophysical metrics against 11 variables of coral reef fishes, i.e., diversity, abundance, and biomass of coral reef fishes at three trophic levels. The results showed for the first time that the covers of other fauna, coral rubbles, and soft corals were the three most important predictor variables for nearly all coral reef fish variables. Other fauna cover was the important predictor for all 11 coral reef fish variables. Coral rubble cover was the predictor for ten variables, but carnivore fish abundance. Soft coral cover was a good predictor for corallivore, carnivore, and targeted fishes. Despite important predictors for corallivore and carnivore fish variables, hard coral cover was not the critical predictor for herbivore fish variables. The other important predictor variables with a consistent pattern were dead coral covered with algae and rocks. Dead coral covered with algae was an important predictor for herbivore fishes, while the rock was good for only carnivore fishes.
{"title":"Other faunas, coral rubbles, and soft coral covers are important predictors of coral reef fish diversity, abundance, and biomass","authors":"Imam Bachtiar, T. A. Hadi, Karnan Karnan, Naila Taslimah Bachtiar","doi":"10.47853/fas.2023.e23","DOIUrl":"https://doi.org/10.47853/fas.2023.e23","url":null,"abstract":"Coral reef fisheries are prominent for the archipelagic countries’ food sufficiency and security. Studies showed that fish abundance and biomass are affected by biophysical variables. The present study determines which biophysical variables are important predictors of fish diversity, abundance, and biomass. The study used available monitoring data from the Indonesian Research Center for Oceanography, the National Board for Research and Innovation. Data were collected from 245 transects in 19 locations distributed across the Indonesian Archipelago, including the eastern Indian Ocean, Sunda Shelf (Karimata Sea), Wal-lacea (Flores and Banda Seas), and the western Pacific Ocean. Principal component analysis and multiple regression model were administered to 13 biophysical metrics against 11 variables of coral reef fishes, i.e., diversity, abundance, and biomass of coral reef fishes at three trophic levels. The results showed for the first time that the covers of other fauna, coral rubbles, and soft corals were the three most important predictor variables for nearly all coral reef fish variables. Other fauna cover was the important predictor for all 11 coral reef fish variables. Coral rubble cover was the predictor for ten variables, but carnivore fish abundance. Soft coral cover was a good predictor for corallivore, carnivore, and targeted fishes. Despite important predictors for corallivore and carnivore fish variables, hard coral cover was not the critical predictor for herbivore fish variables. The other important predictor variables with a consistent pattern were dead coral covered with algae and rocks. Dead coral covered with algae was an important predictor for herbivore fishes, while the rock was good for only carnivore fishes.","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"23 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"83978300","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The suitability of any fish species for successful aquaculture requires basic information on its reproduction and growth. This study investigated some facets of the reproductive biology of Synodontis shall (Mochokidae) from River Siluko in Nigeria. Fish samples were collected forth-nightly for a duration of fourteen (14) months—March 2015 to April, 2016 with the assistance of artisanal fishermen. Fishes were identified using taxonomic guides and standard techniques were used for determination of sex ratio, gonad maturation and fecundity. Linear regression method was used to define the correlation between fecundity and fish length, body weight and ovary weight. Results showed that sex ratio did not indicate a significant divergence ( p > 0.05) from the 1 male to 1 female distribution ratio (1:1.41). Gonad morphology revealed paired gonads. Testes and ovaries were classified into four maturity stages: immature, resting, ripening and ripe. Gonadosomatic index ranged from 0.04 to 5.68 (males) and 0.03 to 20.19 (females). Absolute fecundity ranged from 1,014 to 4,520 eggs (mean = 2,592 eggs) and did not correlate significantly ( p > 0.05) to ovary weight. This study has contributed to existing data on the biology of freshwater fish species in Nigeria and provided valuable information for fishery management tools in the conservation and utilization of this valuable freshwater fish species.
{"title":"Some aspects of the reproductive biology of Synodontis schall from a lotic freshwater in Nigeria","authors":"Ukpamufo Cyril Olowo, N. Egun, I. Oboh","doi":"10.47853/fas.2023.e22","DOIUrl":"https://doi.org/10.47853/fas.2023.e22","url":null,"abstract":"The suitability of any fish species for successful aquaculture requires basic information on its reproduction and growth. This study investigated some facets of the reproductive biology of Synodontis shall (Mochokidae) from River Siluko in Nigeria. Fish samples were collected forth-nightly for a duration of fourteen (14) months—March 2015 to April, 2016 with the assistance of artisanal fishermen. Fishes were identified using taxonomic guides and standard techniques were used for determination of sex ratio, gonad maturation and fecundity. Linear regression method was used to define the correlation between fecundity and fish length, body weight and ovary weight. Results showed that sex ratio did not indicate a significant divergence ( p > 0.05) from the 1 male to 1 female distribution ratio (1:1.41). Gonad morphology revealed paired gonads. Testes and ovaries were classified into four maturity stages: immature, resting, ripening and ripe. Gonadosomatic index ranged from 0.04 to 5.68 (males) and 0.03 to 20.19 (females). Absolute fecundity ranged from 1,014 to 4,520 eggs (mean = 2,592 eggs) and did not correlate significantly ( p > 0.05) to ovary weight. This study has contributed to existing data on the biology of freshwater fish species in Nigeria and provided valuable information for fishery management tools in the conservation and utilization of this valuable freshwater fish species.","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"84 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73763671","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Beside that the fish species and their sub-populations are highly important as a keystone species in the coastal and marine eco-system, there are very few studies on their presence, distribution and temporal variations within and around the lagoon ecosystems in Albania. This paper provides an updated review on the life cycle, fishery, exploitation state and management of the main species that are subject of commercial fishing in the Karavasta lagoon, southeastern Adriatic coast of Albania. Due to the fact that lagoons represent a continuum between continental and marine aquatic ecosystems they play a crucial role in species life cycles. Further on in the circumstances of rapid utilizations and environmental changes, anomalies in salinity and temperatures, accelerated anthropogenic influences their rate of vulnerability is highly increased. Following the requirements of the Water Framework Directive, transitional water, coastal lagoons and estuaries there is a need for urgent monitoring and management approaches. The commercial species include: European eel ( Anguilla anguilla ), species of Family Mugilidae ( Mugil cephalus , Liza ramada , Liza salienes and Chelon labrosus ), Seabream ( Sparus aurata ), Seabass ( Dincentrarchus labrax ), etc. Fish productivity is oscillating from maximum value of 61.95 kg/ha is recorded in period of 1975–80 and lower value of 31 kg/ha in year 2020. Our study highlights importance of fish and fishery long-term monitoring, and contributes to understand the driving factors in productivity, migration patterns and species ecology in the vital coastal ecosystems.
{"title":"Overfishing and recent risk for collapse of fishery in coastal\u0000 Mediterranean lagoon ecosystem (Karavasta lagoon, southeastern Adriatic\u0000 sea)","authors":"S. Shumka, Y. Nagahama, Sarjmir Hoxha, K. Asano","doi":"10.47853/fas.2023.e25","DOIUrl":"https://doi.org/10.47853/fas.2023.e25","url":null,"abstract":"Beside that the fish species and their sub-populations are highly important as a keystone species in the coastal and marine eco-system, there are very few studies on their presence, distribution and temporal variations within and around the lagoon ecosystems in Albania. This paper provides an updated review on the life cycle, fishery, exploitation state and management of the main species that are subject of commercial fishing in the Karavasta lagoon, southeastern Adriatic coast of Albania. Due to the fact that lagoons represent a continuum between continental and marine aquatic ecosystems they play a crucial role in species life cycles. Further on in the circumstances of rapid utilizations and environmental changes, anomalies in salinity and temperatures, accelerated anthropogenic influences their rate of vulnerability is highly increased. Following the requirements of the Water Framework Directive, transitional water, coastal lagoons and estuaries there is a need for urgent monitoring and management approaches. The commercial species include: European eel ( Anguilla anguilla ), species of Family Mugilidae ( Mugil cephalus , Liza ramada , Liza salienes and Chelon labrosus ), Seabream ( Sparus aurata ), Seabass ( Dincentrarchus labrax ), etc. Fish productivity is oscillating from maximum value of 61.95 kg/ha is recorded in period of 1975–80 and lower value of 31 kg/ha in year 2020. Our study highlights importance of fish and fishery long-term monitoring, and contributes to understand the driving factors in productivity, migration patterns and species ecology in the vital coastal ecosystems.","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"41 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-04-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82666376","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"Morphometric relations and diet compositions of Nile tilapia\u0000 Oreochromis niloticus (Linn. 1758) in Lake Tana Gorgora\u0000 gulf, Ethiopia","authors":"Flipos Engdaw","doi":"10.47853/fas.2023.e14","DOIUrl":"https://doi.org/10.47853/fas.2023.e14","url":null,"abstract":"","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"123 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"79472412","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
T. Huyen, Ha Phuong Trang, Nguyen Thi-Ngan, Bui Dinh-Thanh, L. Quoc, Trinh Ngoc Nam
{"title":"The responsibility of C-terminal domain in the thermolabile\u0000 haemolysin activity of Vibrio parahaemolyticus and inhibition\u0000 treatments by Phellinus sp. extracts","authors":"T. Huyen, Ha Phuong Trang, Nguyen Thi-Ngan, Bui Dinh-Thanh, L. Quoc, Trinh Ngoc Nam","doi":"10.47853/fas.2023.e17","DOIUrl":"https://doi.org/10.47853/fas.2023.e17","url":null,"abstract":"","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"17 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"80820371","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
I. N. Suyasa, Alifah Fitam Rakhma Sari, S. Agustina, Rian Prasetia, Ratna Suharti, T. Ruchimat, B. Wiryawan, I. Yulianto
{"title":"Length-based stock assessment of the pacific yellowtail emperor in\u0000 the Southern Sulawesi, Indonesia","authors":"I. N. Suyasa, Alifah Fitam Rakhma Sari, S. Agustina, Rian Prasetia, Ratna Suharti, T. Ruchimat, B. Wiryawan, I. Yulianto","doi":"10.47853/fas.2023.e18","DOIUrl":"https://doi.org/10.47853/fas.2023.e18","url":null,"abstract":"","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"19 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"73632084","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ju-Won Ryu, Myeong-Seok Lee, Mi-Jin Yim, Jeong-Min Lee, D. Lee, Young-Mog Kim, S. Eom
{"title":"α-amylase and α-glucosidase inhibition effects of\u0000 Korean edible brown, green, and red seaweed extracts","authors":"Ju-Won Ryu, Myeong-Seok Lee, Mi-Jin Yim, Jeong-Min Lee, D. Lee, Young-Mog Kim, S. Eom","doi":"10.47853/fas.2023.e15","DOIUrl":"https://doi.org/10.47853/fas.2023.e15","url":null,"abstract":"","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"1 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"82810646","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Gaeun Kim, H. Sohn, Wkm Omeka, Chaehyeon Lim, Don Anushka Sandaruwan Elvitigala, Jehee Lee
Lysozymes are well-known antibacterial enzymes that mainly target the peptidoglycan layer of the bacterial cell wall. Animal ly-sozymes are mainly categorized as g-type, c-type, and i-type based on protein sequence and structural differences. In this study, c-type (AcLysC) and g-like-type (AcLysG-like) lysozymes from Amphiprion clarkii were characterized in silico via expressional and functional approaches. According to in silico analysis, open reading frames of AcLysC and AcLysG-like were 429 bp and 570 bp, respectively, encoding the corresponding polypeptide chains with 142 and 189 amino acids. Elevated expression levels of AcLysC and AcLysG-like were observed in the liver and the heart tissues, respectively, as evidenced by quantitative real-time polymerase chain reaction assays. AcLysC and AcLysG-like transcript levels were upregulated in gills, head kidney, and blood cells following experimental immune stimulation. Recombinant AcLysC exhibited potent lytic activity against Vibrio anguillarum , whereas recombinant AcLysG-like showed remarkable antibacterial activity against Vibrio harveyi and Streptococcus parauberis , which was further evidenced by scanning electron microscopic imaging of destructed bacterial cell walls. The findings of this study collectively suggest the potential roles of AcLysC and AcLysG-like in host immune defense.
{"title":"Functional characterization and expression analysis of c-type and\u0000 g-like-type lysozymes in yellowtail clownfish (Amphiprion\u0000 clarkii)","authors":"Gaeun Kim, H. Sohn, Wkm Omeka, Chaehyeon Lim, Don Anushka Sandaruwan Elvitigala, Jehee Lee","doi":"10.47853/fas.2023.e16","DOIUrl":"https://doi.org/10.47853/fas.2023.e16","url":null,"abstract":"Lysozymes are well-known antibacterial enzymes that mainly target the peptidoglycan layer of the bacterial cell wall. Animal ly-sozymes are mainly categorized as g-type, c-type, and i-type based on protein sequence and structural differences. In this study, c-type (AcLysC) and g-like-type (AcLysG-like) lysozymes from Amphiprion clarkii were characterized in silico via expressional and functional approaches. According to in silico analysis, open reading frames of AcLysC and AcLysG-like were 429 bp and 570 bp, respectively, encoding the corresponding polypeptide chains with 142 and 189 amino acids. Elevated expression levels of AcLysC and AcLysG-like were observed in the liver and the heart tissues, respectively, as evidenced by quantitative real-time polymerase chain reaction assays. AcLysC and AcLysG-like transcript levels were upregulated in gills, head kidney, and blood cells following experimental immune stimulation. Recombinant AcLysC exhibited potent lytic activity against Vibrio anguillarum , whereas recombinant AcLysG-like showed remarkable antibacterial activity against Vibrio harveyi and Streptococcus parauberis , which was further evidenced by scanning electron microscopic imaging of destructed bacterial cell walls. The findings of this study collectively suggest the potential roles of AcLysC and AcLysG-like in host immune defense.","PeriodicalId":12249,"journal":{"name":"Fisheries and Aquatic Sciences","volume":"95 1","pages":""},"PeriodicalIF":0.0,"publicationDate":"2023-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"89002002","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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