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Frontiers | Effect of network structure on the accuracy of resilience dimension reduction Frontiers | 网络结构对弹性降维准确性的影响
IF 3.1 3区 物理与天体物理 Q2 PHYSICS, MULTIDISCIPLINARY Pub Date : 2024-05-28 DOI: 10.3389/fphy.2024.1420556
Min Liu, Qiang Guo, Jianguo Liu
Dimension reduction is an effective method for system’s resilience analysis. In this paper, we investigate the effect of network structure on the accuracy of resilience dimension reduction. First, we introduce the resilience dimension reduction method and define the evaluation indicator of the resilience dimension reduction method. Then, by adjusting node connections, preferential connection mechanisms, and connection probabilities, we generate artificial networks, small-world networks and social networks with tunable assortativity coefficients, average clustering coefficients, and modularities, respectively. Experimental results for the gene regulatory dynamics show that the network structures with positive assortativity, large clustering coefficient, and significant community can enhance the accuracy of resilience dimension reduction. The result of this paper indicates that optimizing network structure can enhance the accuracy of resilience dimension reduction, which is of great significance for system resilience analysis and provides a new perspective and theoretical basis for selecting dimension reduction methods in system resilience analysis.
降维是系统弹性分析的一种有效方法。本文研究了网络结构对弹性降维精度的影响。首先,我们介绍了弹性降维方法,并定义了弹性降维方法的评价指标。然后,通过调整节点连接、优先连接机制和连接概率,我们生成了分别具有可调同类系数、平均聚类系数和模块化程度的人工网络、小世界网络和社会网络。基因调控动力学的实验结果表明,具有正同类性、大聚类系数和显著群落的网络结构可以提高恢复力降维的准确性。本文的研究结果表明,优化网络结构可以提高恢复力降维的准确性,这对系统恢复力分析具有重要意义,为系统恢复力分析中选择降维方法提供了新的视角和理论依据。
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引用次数: 0
Investigation and comparison on the interaction of laser and bio-tissue based on two classical models, the beam broaden model and diffusion approximation equation model, theoretically and experimentally 基于两种经典模型--光束拓宽模型和扩散近似方程模型--对激光与生物组织相互作用的理论和实验研究与比较
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-28 DOI: 10.3389/fphy.2024.1407471
Yuru Cheng, Yu Shen, Yuxia Gao, Ya Wen, Ze Lv, Ning Wen, Erpeng Wang, Guanghe Li, Yong Bo, Qinjun Peng
Three methods are used for a numerical solution, the Monte Carlo method, diffusion approximation equation model, and beam broaden model based on Beer–Lambert’s law equation. The comparison between the first two methods is reported theoretically, and the latter is a better choice in the high-density tissue. However, the comparison between the third method and the first or the second method is rarely reported. Two classical theoretical models describing the interaction between the laser and the bio-tissue are analyzed and compared to determine which is more suitable for analyzing the interaction, the beam broaden model or diffusion approximation equation model. Intensity distribution is simulated and compared for the two models. Temperature distribution and thermal damage are investigated theoretically and experimentally for both models. The differences and the reasons are analyzed. The diffusion approximation equation model is more suitable for analyzing the mechanism between the laser and the bio-tissue based on the degree of fitting between the simulated and experimental data. Theoretical analyses for the two models are carried out in detail. The comparison between the two models is rarely reported, and it is reported in this article for the first time, theoretically and experimentally. This report provides a better choice for quickly analyzing the interaction mechanism between the laser and the bio-tissue.
数值求解采用了三种方法:蒙特卡洛法、扩散近似方程模型和基于比尔-朗伯定律方程的光束拓宽模型。前两种方法在理论上进行了比较,后者在高密度组织中是更好的选择。然而,第三种方法与第一种或第二种方法的比较却鲜有报道。本文对描述激光与生物组织相互作用的两种经典理论模型进行了分析和比较,以确定光束拓宽模型和扩散近似方程模型哪个更适合分析相互作用。对两种模型的强度分布进行了模拟和比较。对两种模型的温度分布和热损伤进行了理论和实验研究。分析了两者的差异及其原因。从模拟数据与实验数据的拟合程度来看,扩散近似方程模型更适合分析激光与生物组织之间的机理。对两种模型进行了详细的理论分析。两种模型之间的比较很少见报道,本文首次从理论和实验两方面进行了报道。该报告为快速分析激光与生物组织之间的相互作用机制提供了更好的选择。
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引用次数: 0
Tunable optical parametric oscillator based on ZnGeP2 crystal for greenhouse gas remote sensing systems 基于 ZnGeP2 晶体的可调谐光参量振荡器,用于温室气体遥感系统
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-28 DOI: 10.3389/fphy.2024.1404504
N. N. Yudin, M. M. Zinoviev, S. N. Podzyvalov, V. S. Kuznetsov, E. S. Slyunko, A. B. Lysenko, A. Yu. Kalsin, A. Sh. Gabdrakhmanov, S. V. Yakovlev, S. A. Sadovnikov, O. A. Romanovskii, H. Baalbaki
This work is devoted to the development of a compact source of coherent radiation with frequency-energy characteristics and a spectral generation range that allows remote determination of background concentrations of greenhouse gases in the atmosphere. The aim of this work was to create a frequency parametric converter based on ZGP, pumped by Ho:YAG laser radiation. For use as a source in a mobile lidar for remote determination of the concentration of greenhouse gases in the atmosphere. In the course of the research, a layout of an Optical parametric oscillator OPO based on a ZGP crystal with Ho:YAG laser radiation pumping was developed. The system’s continuous failure-free operation time was 1.5 h at a pulse repetition rate of 10 kHz and a pulse energy of the generated radiation of 0.08 mJ. The tuning range of the OPO was from 3.3 to 5 μm when using a Lyot filter. The losses from the average generation power when the Lyot filter was introduced into the resonator were 30%. At the same time, it was possible to achieve a linewidth of the generated radiation of 0.7 nm. The divergence of the generated radiation did not exceed 1.5 mrad.The absorption spectrum of gases CO2, CH4, N2O, CO in a gas cell was simulated for the entire generation range of the ZnGeP2-based OPO. As a result of the simulation, the most intense absorption lines of gases CO2, CH4, N2O, CO in the OPO tuning range were revealed, the central wavelengths of the absorption lines and their spectral width were determined.
这项工作致力于开发一种具有频率-能量特性和光谱生成范围的紧凑型相干辐射源,以便远程测定大气中温室气体的本底浓度。这项工作的目的是创建一个基于 ZGP 的频率参数转换器,由 Ho:YAG 激光辐射泵浦。作为移动激光雷达的光源,用于远程测定大气中温室气体的浓度。在研究过程中,开发出了一种基于 ZGP 晶体、由 Ho:YAG 激光辐射泵浦的光参量振荡器 OPO 布局。在脉冲重复频率为 10 kHz、产生的辐射脉冲能量为 0.08 mJ 的条件下,该系统的连续无故障运行时间为 1.5 h。使用 Lyot 滤波器时,OPO 的调谐范围为 3.3 至 5 μm。在谐振器中引入 Lyot 滤波器时,平均发电功率的损耗为 30%。同时,所产生辐射的线宽为 0.7 纳米。在基于 ZnGeP2 的 OPO 的整个生成范围内,模拟了气体池中 CO2、CH4、N2O、CO 气体的吸收光谱。模拟结果揭示了 OPO 调谐范围内 CO2、CH4、N2O、CO 气体最强烈的吸收线,并确定了吸收线的中心波长及其光谱宽度。
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引用次数: 0
Indirect search of heavy neutral leptons using the DUNE near detector 利用 DUNE 近探测器间接搜索重中性轻子
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-28 DOI: 10.3389/fphy.2024.1398070
S. Carbajal, A. M. Gago
We evaluate the potential of the DUNE near detector (DUNEND) for establishing bounds for heavy neutral leptons (HNLs). This is achieved by studying how the presence of HNLs affects the production rates of active neutrinos, therefore creating a deficit in the neutrino charged current (CC) events at the LArTPC of the DUNEND. The estimated bounds on HNLs are calculated for masses between 1 eV and 500 MeV. We consider 10 years of operation (five in neutrino and antineutrino modes) and obtain limits of |Uμ4|2 &lt; 9 × 10−3 (4 × 10−2) and |Ue4|2 &lt; 7 × 10−3 (3 × 10−2) for masses below 10 MeV and a 5% (20%) overall normalization uncertainty in the neutrino charged current event rate prediction. These limits, within the region of masses below 2 (10) MeV, are better than those that can be achieved by DUNE direct searches for the case of a 5% (20%) uncertainty. When a conservative 20% uncertainty is present, our limits can only improve current constraints on |Ue4|2 by up to a factor of 3 in a small region of approximately 5 eV and set limits on |Uμ4|2 in a mass region free of constraints (40 eV–1 MeV).
我们评估了 DUNE 近探测器(DUNEND)在确定重中性轻子(HNLs)边界方面的潜力。这是通过研究 HNLs 的存在如何影响主动中微子的产生率,从而在 DUNEND 的 LArTPC 中造成中微子带电电流(CC)事件的赤字来实现的。对 HNLs 的估计界限是针对质量在 1 eV 和 500 MeV 之间的中微子计算的。我们考虑了10年的运行(5年在中微子和反中微子模式下),得到了质量低于10 MeV的|Uμ4|2 &lt; 9 × 10-3(4 × 10-2)和|Ue4|2 &lt; 7 × 10-3(3 × 10-2)的限值,以及中微子带电电流事件率预测中5%(20%)的总体归一化不确定性。在质量低于2(10)MeV的区域内,这些限制优于DUNE直接搜索在5%(20%)不确定性情况下所能达到的限制。当存在保守的20%不确定性时,我们的限值只能在大约5 eV的小区域内将目前对|Ue4|2的约束提高最多3倍,并在没有约束的质量区域(40 eV-1 MeV)对|Uμ4|2设定限值。
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引用次数: 0
The effects of plasma density structure on the propagation of magnetosonic waves: 1-D particle-in-cell simulations 等离子体密度结构对磁声波传播的影响:一维粒子入胞模拟
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-28 DOI: 10.3389/fphy.2024.1254024
Tong Shao, Xinliang Gao, Yangguang Ke, Quanming Lu, Xueyi Wang
Magnetosonic (MS) waves, i.e., ion Bernstein mode waves, are one of the common plasma waves in the Earth’s magnetosphere, which are important for regulating charged particle dynamics. How MS waves propagate in the magnetosphere is critical to understanding the global distribution of the waves, but it remains unclear. Although previous studies present that MS waves can be reflected by fine-scale density structures, the dissipation of waves by background plasma has long been neglected. In this study, we perform one-dimensional (1-D) particle-in-cell (PIC) simulations to study the propagation of MS waves through density structures, where both absorption and reflection have been included. We find that absorption is as important as reflection when considering the propagation of MS waves through density structures, and both of them are strongly dependent on the shape of density structures. Specifically, the reflectivity of MS waves is positively and negatively correlated with the height and width of density structures, respectively, while the absorptivity of MS waves has a positive correlation with both the height and width of density structures. Our study demonstrates the significance of absorption during the propagation of MS waves, which may help better understand the distribution of MS waves in the Earth’s magnetosphere.
磁声波(MS),即离子伯恩斯坦模式波,是地球磁层中常见的等离子体波之一,对调节带电粒子动力学非常重要。MS 波如何在磁层中传播对了解该波的全球分布至关重要,但目前仍不清楚。虽然之前的研究表明 MS 波可以被细尺度密度结构反射,但长期以来,本底等离子体对 MS 波的消散一直被忽视。在本研究中,我们进行了一维(1-D)粒子入胞(PIC)模拟,研究 MS 波在密度结构中的传播,其中包括吸收和反射。我们发现,在考虑 MS 波在密度结构中的传播时,吸收与反射同样重要,而且两者都与密度结构的形状密切相关。具体来说,MS 波的反射率与密度结构的高度和宽度分别呈正相关和负相关,而 MS 波的吸收率与密度结构的高度和宽度均呈正相关。我们的研究证明了 MS 波传播过程中吸收的重要性,这可能有助于更好地理解 MS 波在地球磁层中的分布。
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引用次数: 0
Magnetohydrodynamics simulation of magnetic reconnection process based on the laser-driven Helmholtz capacitor-coil targets 基于激光驱动亥姆霍兹电容线圈目标的磁重联过程磁流体力学模拟
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-28 DOI: 10.3389/fphy.2024.1380844
Chunqing Xing, Yongli Ping, Xu Zhao, Weiming An, Jiayong Zhong
Magnetic reconnection is an important rapid energy release mechanism in astrophysics. Magnetic energy can be effectively converted into plasma kinetic energy, thermal energy, and radiation energy. This study is based on the magnetohydrodynamics simulation method and utilizes the FLASH code to investigate the laser-driven magnetic reconnection physical process of the Helmholtz capacitor-coil target. The simulation model incorporates the laser driving effect, and the external magnetic field consistent with the Helmholtz capacitor-coil target is written in. This approach achieves a magnetic reconnection process that is more consistent with the experiment. By changing the resistivity, subtle differences in energy conversion during the evolution of magnetic reconnection are observed. Under conditions of low resistivity, there is a more pronounced increase in the thermal energy of ions compared to other energy components. In simulations with high resistivity, the increase in electrons thermal energy is more prominent. The simulation gives the evolution trajectory of magnetic reconnection, which is in good agreement with the experimental results. This has important reference value for experimental research on the low-β magnetic reconnection.
磁重联是天体物理学中一种重要的快速能量释放机制。磁能可以有效地转化为等离子体动能、热能和辐射能。本研究基于磁流体力学模拟方法,利用 FLASH 代码研究亥姆霍兹电容线圈靶的激光驱动磁重联物理过程。仿真模型包含了激光驱动效应,并写入了与亥姆霍兹电容线圈靶一致的外部磁场。这种方法实现了与实验更加一致的磁重联过程。通过改变电阻率,可以观察到磁重联演化过程中能量转换的细微差别。在低电阻率条件下,与其他能量成分相比,离子热能的增加更为明显。在高电阻率模拟中,电子热能的增加更为突出。模拟结果给出了磁重联的演化轨迹,与实验结果非常吻合。这对于低β磁重联的实验研究具有重要的参考价值。
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引用次数: 0
Frontiers | The morphology of cell spheroids in simple shear flow 前沿 | 简单剪切流中的球形细胞形态
IF 3.1 3区 物理与天体物理 Q2 PHYSICS, MULTIDISCIPLINARY Pub Date : 2024-05-27 DOI: 10.3389/fphy.2024.1347934
Rosalia Ferraro, Jasmin Di Franco, Sergio Caserta, Stefano Guido
Cell spheroids are a widely used model to investigate cell-cell and cell-matrix interactions in a 3D microenvironment in vitro. Most research on cell spheroids has been focused on their response to various stimuli under static conditions. Recently, the effect of flow on cell spheroids has been investigated in the context of tumor invasion in interstitial space. In particular, microfluidic perfusion of cell spheroids embedded in a collagen matrix has been shown to modulate cell-cell adhesion and to represent a possible mechanism promoting tumor invasion by interstitial flow. However, studies on the effects of well-defined flow fields on cell spheroids are lacking in the literature. Here, we apply simple shear flow to cell spheroids in a parallel plate apparatus while observing their morphology by optical microscopy. By using image analysis techniques, we show that cell spheroids rotate under flow as rigid prolate ellipsoids. As time goes on, cells from the outer layer detach from the sheared cell spheroids and are carried away by the flow. Hence, the size of cell spheroids declines with time at a rate increasing with the external shear stress, which can be used to estimate cell-cell adhesion. The technique proposed in this work allows one to correlate flow-induced effects with microscopy imaging of cell spheroids in a well-established shear flow field, thus providing a method to obtain quantitative results which are relevant in the general field of mechanobiology.
细胞球是一种广泛使用的模型,用于研究体外三维微环境中细胞-细胞和细胞-基质之间的相互作用。有关细胞球的大多数研究都集中在细胞球在静态条件下对各种刺激的反应。最近,研究人员以肿瘤在间质空间的侵袭为背景,研究了流动对细胞球的影响。特别是,嵌入胶原基质的细胞球体的微流体灌注已被证明可调节细胞-细胞粘附,并代表了间质流动促进肿瘤侵袭的一种可能机制。然而,文献中缺乏关于明确流场对细胞球体影响的研究。在这里,我们在平行板装置中对细胞球体施加简单的剪切流,同时用光学显微镜观察它们的形态。通过使用图像分析技术,我们发现细胞球体在流动过程中会像刚性的椭圆体一样旋转。随着时间的推移,外层的细胞从剪切的细胞球体上脱离,并被流动带走。因此,细胞球的大小会随着时间的推移而减小,减小的速度随外部剪切应力的增大而增大。这项工作中提出的技术可以将流动诱导效应与细胞球体在成熟的剪切流场中的显微成像联系起来,从而提供了一种获得定量结果的方法,这种定量结果与一般的机械生物学领域相关。
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引用次数: 0
Frontiers | Exploring Mo-ZnO@NF for hydrogen generation and methylene blue remediation: sunlight-driven catalysis 前沿|探索用于制氢和亚甲基蓝修复的 Mo-ZnO@NF:太阳光驱动催化作用
IF 3.1 3区 物理与天体物理 Q2 PHYSICS, MULTIDISCIPLINARY Pub Date : 2024-05-27 DOI: 10.3389/fphy.2024.1416563
Yogita Padwal, Ratna Chauhan, Rajani Panchang, Hassan Fouad, Suresh W. Gosavi
In this study, we elucidate the synthesis and characterization of molybdenum (Mo) doped zinc oxide (ZnO) nanoflowers (Mo-ZnO@NF) fabricated via a hydrothermal approach, showcasing their potential application in hydrogen generation and dye degradation. The successful synthesis of these nanoflowers is achieved through the deliberate incorporation of Mo ions into the ZnO lattice, yielding a distinctive hierarchical flower-like morphology. Comprehensive structural, morphological, and optical analyses are conducted employing a suite of analytical techniques, encompassing XRD, Raman, FESEM, and UV-Visible spectroscopy. XRD analysis confirms the retention of the hexagonal wurtzite crystal structure, accompanied by discernible peak shifts indicative of Mo ion integration. FESEM imaging further elucidates the flower-like architecture of Mo-ZnO, underscoring the intricate morphological features. Photocatalytic assessment reveals the remarkable efficacy of Mo-ZnO@NF, as evidenced by an unprecedented hydrogen evolution rate of 2024 mmol/h/g and 97% Methylene Blue (MB) dye degradation within a mere 40-minute timeframe. Furthermore, a comparative investigation between pristine ZnO and varying Mo doping concentrations (ranging from 1% to 5%) underscores the optimal doping concentration of 1% Mo in ZnO. This concentration threshold is shown to engender superior photocatalytic performance, potentially attributed to enhanced charge carrier separation and increased surface area conducive to catalytic reactions. Overall, this study not only advances our understanding of Mo-ZnO@NF nanostructures but also elucidates key insights into optimizing their photocatalytic efficacy for diverse environmental remediation applications.
在本研究中,我们阐明了通过水热法制造的钼(Mo)掺杂氧化锌(ZnO)纳米花(Mo-ZnO@NF)的合成和表征,展示了它们在制氢和染料降解方面的潜在应用。这些纳米花的成功合成是通过在氧化锌晶格中有意识地加入 Mo 离子实现的,从而产生了独特的分层花状形貌。利用 XRD、拉曼、FESEM 和紫外-可见光谱等一系列分析技术,对纳米花进行了全面的结构、形态和光学分析。X 射线衍射分析证实了六方菱锰矿晶体结构的保留,并伴有表明钼离子整合的明显峰值移动。FESEM 成像进一步阐明了 Mo-ZnO 的花状结构,突出了其错综复杂的形态特征。光催化评估揭示了 Mo-ZnO@NF 的显著功效,在短短 40 分钟的时间内,氢气进化率达到 2024 mmol/h/g,亚甲基蓝(MB)染料降解率达到 97%,这是前所未有的。此外,原始氧化锌与不同钼掺杂浓度(从 1%到 5%不等)之间的比较研究强调了氧化锌中 1%钼的最佳掺杂浓度。这一浓度阈值可产生卓越的光催化性能,这可能归因于电荷载流子分离的增强和有利于催化反应的表面积的增加。总之,这项研究不仅加深了我们对 Mo-ZnO@NF 纳米结构的理解,而且还阐明了优化其光催化功效以用于各种环境修复应用的关键见解。
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引用次数: 0
Simulation of thermal field in mass concrete with cooling pipes based on the isogeometric analysis method 基于等距分析法的大体积混凝土冷却管热场模拟
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-24 DOI: 10.3389/fphy.2024.1338718
Qingwen Li, Guorong Chen, Fuxian Zhu
As the water pipe cooling system is widely applied to controlling temperature in mass concrete structures, the precise simulation of the temperature field in mass concrete with cooling pipes embedded is meaningful. This paper presents an isogeometric analysis (IGA) with NURBS for heat transfer in mass concrete with consideration of the cooling pipe. The proposed method not only achieves the same level of accuracy with fewer nodes but also eliminates the time-consuming process of mesh in the traditional FEM. The coarsest parameter space which depicts small pipe and large concrete precisely is constructed to create an efficient model for numerical computation. In addition, the unique k-refinement in IGA is supposed to be the most appropriate encryption mechanism, and the knot insertion vector for effective refinement is calculated by considering the characteristics of temperature gradient distribution around the cooling pipes. In addition, a different calculation parameter has been discussed to show the stability and flexibility of the IGA. The obtained numerical results demonstrate the accuracy and efficiency of the proposed scheme in the simulation of transient temperature fields in concrete structures with cooling systems.
由于水管冷却系统被广泛应用于大体积混凝土结构的温度控制,因此对埋设冷却管的大体积混凝土中的温度场进行精确模拟非常有意义。本文针对大体积混凝土中的传热问题,提出了一种考虑冷却管的 NURBS 等距分析(IGA)方法。所提出的方法不仅以较少的节点达到了相同的精度水平,而且省去了传统有限元模型中耗时的网格划分过程。构建了精确描述小管道和大混凝土的最粗参数空间,为数值计算创建了一个高效模型。此外,IGA 中唯一的 k-细化被认为是最合适的加密机制,而有效细化的节点插入向量则是通过考虑冷却管道周围温度梯度分布的特征来计算的。此外,还讨论了不同的计算参数,以显示 IGA 的稳定性和灵活性。所获得的数值结果证明了所提出的方案在模拟带有冷却系统的混凝土结构中的瞬态温度场时的准确性和高效性。
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引用次数: 0
Theoretical realization of tunable hollow beams using a periodical ring structure with a complex phase 利用具有复杂相位的周期环结构从理论上实现可调谐空心光束
IF 3.1 3区 物理与天体物理 Q1 Mathematics Pub Date : 2024-05-24 DOI: 10.3389/fphy.2024.1383835
Changwei Sun, Quansen Wang, Jing Liang, Wencong Wang, Dongmei Liu, Zhenhua Chen, Min Gu
Hollow beam is a peculiar structure beam, which has been widely used in various areas. Here, we propose a novel diffraction optical element to generate tunable hollow beams. This element is composed of periodic concentric rings. The phase of each ring is periodically distributed between −π and π and satisfies a complex variable function. By tuning the parameters of the structure, we can flexibly manipulate the size and length of the hollow beam. The length of the beam can be increased from 98 λ to 248 λ, and the full width at half maximum varies from 0.43 λ to 0.61 λ. Moreover, the light intensity and side lobe of the hollow beam can also be regulated using the designed diffraction optical element. The potential applications of this highly tunable hollow beam include optical nanomanipulation, microscopic imaging, and nanolithography.
空心光束是一种结构奇特的光束,已被广泛应用于各个领域。在此,我们提出了一种新型衍射光学元件,用于产生可调谐空心光束。该元件由周期性同心环组成。每个环的相位周期性地分布在 -π 和 π 之间,并满足一个复变函数。通过调整结构参数,我们可以灵活地控制空心梁的尺寸和长度。光束长度可从 98 λ 增加到 248 λ,半最大全宽可从 0.43 λ 增加到 0.61 λ。此外,空心光束的光强和侧叶也可以通过设计的衍射光学元件进行调节。这种高度可调的空心光束的潜在应用领域包括光学纳米操纵、显微成像和纳米光刻。
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引用次数: 0
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