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Niche and interspecific associations of dominant tree species in Castanopsis eyrei and Castanopsis carlesii communities in Meihua Mountain, Fujian. 梅花山甜槠和卡勒槠群落优势树种的生态位和种间关联
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1703968
Jiali Yu, Mengwei Chi, Chenyu Gong, Menglin Chang, Xing He, Shipin Chen, Jinping Wu, Liang Ma, Siren Lan

Introduction: Species composition, interspecific associations, and community stability play crucial roles in shaping individual plant survival and population dynamics. Research in this area carries multidimensional significance for forest conservation, contributing to the maintenance of ecological balance and the enhancement of biodiversity. To explore interspecific interactions among dominant species in evergreen broad-leaved forest communities and promote favorable community development, we selected two representative communities dominated by Castanopsis eyrei and Castanopsis carlesii for detailed investigation.

Methods: Using methods such as niche analysis, variance ratio (VR), chi-square test (χ²), and Spearman's rank correlation, we analyzed the niche characteristics and interspecific association patterns of the 13 tree species with the highest importance values (IV) in each community.

Results: Our results revealed high species richness, with Castanopsis carlesii exhibiting the highest importance value and a relatively wide niche breadth, confirming its dominant role. However, the ranking of niche breadth did not correspond directly to the importance value ranking, suggesting that species distribution frequency plays a key role in determining niche width. The average niche overlap (0.26) and niche similarity coefficient (0.29) among dominant species were low, indicating limited resource sharing. Overall, interspecific associations showed a non-significant negative trend, both χ² and Spearman's tests positive-to-negative association ratio was 0.77.

Discussion: Contrary to previous studies that suggest relative stability in evergreen broad-leaved forests, our findings indicate that the studied communities are currently in a relatively unstable developmental stage. This instability highlights the need for strategic adjustments in species composition and enhanced promotion of positive interspecific relationships. We therefore recommend deliberate optimization of tree species assemblages to strengthen facilitative interactions and improve community resilience.

物种组成、种间关联和群落稳定性在植物个体生存和种群动态中起着至关重要的作用。该领域的研究对森林保护具有多方面的意义,有助于维护生态平衡和增强生物多样性。为了探索常绿阔叶林群落优势种间的相互作用,促进群落的良性发展,我们选择了两个具有代表性的以甜槠(Castanopsis eyrei)和卡槠(Castanopsis carlesii)为优势种的群落进行了详细调查。方法:采用生态位分析、方差比(VR)、χ 2检验、Spearman等级相关等方法,对各群落中重要性值最高的13种树种的生态位特征和种间关联模式进行分析。结果:物种丰富度较高,其中Castanopsis carlesii的重要值最高,生态位宽度相对较宽,证实了其优势地位。然而,生态位宽度的排序与重要值排序并不直接对应,表明物种分布频率对生态位宽度起关键作用。优势种间生态位重叠度(0.26)和生态位相似系数(0.29)较低,资源共享程度有限。总体而言,种间关联呈非显著负相关趋势,χ 2和Spearman检验的正负相关比均为0.77。讨论:与以往研究表明常绿阔叶林相对稳定相反,我们的研究结果表明,所研究的群落目前处于一个相对不稳定的发育阶段。这种不稳定性强调了对物种组成进行战略性调整和加强促进积极的种间关系的必要性。因此,我们建议刻意优化树种组合,以加强促进性相互作用,提高群落的复原力。
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引用次数: 0
Predicting the potential distribution of three medicinal Gentiana species in China under climate change scenarios with the MaxEnt model. 利用MaxEnt模型预测气候变化情景下中国三种龙胆的潜在分布
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1729969
Jun Luo, Xinyu Li, Ying Liu, Shiyu Zhang, Anli Liu, Ying Liu, Ying Zhou

The genus Gentiana is concentrated in the Qinghai-Tibet Plateau and adjacent Hengduan Mountains, with its distribution pattern reflecting the synergistic effects of geological and climatic changes. This study employs the MaxEnt model integrated with ArcGIS spatial analysis to predict the potential geographical distribution of three medicinal Gentiana species (G. rhodantha, G. cephalantha, and G. rigescens) in China under current and future climate scenarios (SSP126 and SSP585). Under future climate warming, our projections indicate an overall reduction in suitable habitat area for all three species, with G. rigescens experiencing the most severe habitat loss. Furthermore, the centroid of suitable habitats is projected to shift towards higher latitudes and elevations, reflecting a spatial adaptation strategy to climate change. The key environmental drivers of distribution were identified: annual precipitation (Bio12) and minimum temperature of the coldest month (Bio6) primarily determine the distribution of G. rhodantha, while temperature seasonality (Bio4) and altitude are the dominant factors for G. cephalantha and G. rigescens. Our projections indicate an overall reduction in suitable habitat area for all three species under climate warming, with G. rigescens experiencing the most severe loss. Furthermore, the centroid of suitable habitats is projected to shift northwestward and upward in elevation. These findings highlight species-specific responses to climatic factors and provide a scientific basis for prioritizing the conservation of current highly suitable areas (e.g., Yunnan, Sichuan, and Guizhou), establishing ecological corridors, and implementing ex-situ conservation and sustainable cultivation practices to mitigate the impacts of climate change on these valuable medicinal resources.

龙胆属植物集中分布在青藏高原及其毗邻的横断山脉,其分布格局反映了地质和气候变化的协同效应。利用MaxEnt模型结合ArcGIS空间分析,对当前和未来气候情景(SSP126和SSP585)下中国3种药用龙胆属(rhodantha、G. cephalantha和G. rigescens)的潜在地理分布进行了预测。在未来气候变暖的背景下,我们的预测表明,这三种物种的适宜栖息地面积总体上都在减少,其中大叶蝉的栖息地损失最为严重。此外,适宜生境质心向高纬度和高程方向移动,反映了对气候变化的空间适应策略。结果表明:年降水量(Bio12)和最冷月最低气温(Bio6)是决定红花和棘豆分布的主要环境因子,而季节温度(Bio4)和海拔高度是影响红花和棘豆分布的主要环境因子。我们的预测表明,在气候变暖的影响下,这三种物种的适宜栖息地面积总体上都在减少,其中白桦的损失最为严重。此外,适宜生境的质心在海拔高度上有向西北方向和向上移动的趋势。这些研究结果突出了物种对气候因子的特异性响应,为当前云南、四川和贵州等高适宜区优先保护、建立生态廊道、实施迁地保护和可持续栽培措施以减轻气候变化对这些宝贵药用资源的影响提供了科学依据。
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引用次数: 0
Detection of Taiqiu sweet persimmons during the color-transition period with an improved YOLO11-FC2T model and causal analysis. 改良YOLO11-FC2T模型对太秋甜柿子色过渡期的检测及原因分析
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1742794
Wenhui Dong, Huiqin Li, Lifei Gao, Pengzhi Hou, Yaqing Zhi, Xiaoying Zhang

Introduction: Accurate detection of Taiqiu sweet persimmon in orchards is essential for estimating yield, planning harvest operations, and supporting intelligent management in precision agriculture. However, current fruit-detection approaches for this cultivar, especially during the color-transition period, suffer from highly subjective and inefficient manual inspection and from poor adaptability of existing deep-learning models to complex field scenes.

Methods: In this study, we propose an improved YOLO11-based detector, YOLO11-FC2T, for robust detection under conditions with strong color-background coupling, small or adherent fruits, and uneven illumination. YOLO11-FC2T introduces four key architectural modifications: (1) a C3k2_FasterBlock to improve gradient-efficient feature learning; (2) a C2PSA_CGA module to enhance channel-spatial focus via coordinate-guided aggregation; (3) a three-layer Dysample-T structure to strengthen multi-scale representation; and (4) a cross-scale attention fusion module, CAFMAttention, to better decouple fruits from cluttered backgrounds. To further enhance generalization in complex orchard scenes without additional labeling cost, we introduced the DiffuseMix data-augmentation method and apply it to color-transition images.

Results: Experiments show that YOLO11-FC2T clearly outperforms the YOLO11 baseline. The model achieves a precision of 91.7% (+1.0%), recall of 86.7% (+2.8%), mAP@0.5 of 94.8% (+1.6%), and mAP@0.5-0.95 of 81.2% (+4.0%), where mAP@0.5 uses an IoU threshold of 0.50. On a challenging tail-case set of 537 images, the false detection rate is 1.30%, with a 45.2% reduction in errors relative to YOLO11. In the performance evaluation stage, we first perform causal-effect analysis based on the Average Treatment Effect (ATE) to quantify the independent and joint contributions of each architectural component and of DiffuseMix; at the same time, the efficiency of the model is analyzed by the number of parameters (Params, M) and per-image inference latency (ms). in addition, we construct and use a dedicated tail-case dataset as a supplementary experiment to further verify the robustness and effectiveness of these improvements in the most difficult scenes. Finally, we introduced cross-condition test set to further validate the generalization capability of YOLO11-FC2T. The above results indicate that YOLO11-FC2T not only improves the indicators, but also possesses reliable generalization ability and stability.

Discussion: Overall, YOLO11-FC2T addresses key detection challenges during the color-transition period and provides a practical, portable solution for automated fruit identification and counting in precision agriculture. The above results indicate that YOLO11-FC2T not only improves the indicators, but also possesses reliable generalization ability and stability.

摘要:果园中太秋甜柿的准确检测,对于精准农业的产量估算、收获作业规划、智能管理等至关重要。然而,目前该品种的果实检测方法,特别是在颜色过渡时期,存在高度主观和低效的人工检测以及现有深度学习模型对复杂田间场景适应性差的问题。方法:在本研究中,我们提出了一种改进的基于yolo11的检测器YOLO11-FC2T,用于强色本耦合、小水果或附着水果、光照不均匀等条件下的鲁棒检测。YOLO11-FC2T引入了四个关键的架构修改:(1)C3k2_FasterBlock,以提高梯度高效的特征学习;(2) C2PSA_CGA模块,通过坐标引导聚合增强通道空间聚焦;(3)三层dyssample - t结构,加强多尺度表征;(4)跨尺度注意力融合模块cafattention,更好地将水果从杂乱的背景中分离出来。为了在不增加标记成本的情况下进一步提高复杂果园场景的泛化能力,我们引入了DiffuseMix数据增强方法,并将其应用于颜色过渡图像。结果:实验表明YOLO11- fc2t明显优于YOLO11基线。该模型的精度为91.7%(+1.0%),召回率为86.7% (+2.8%),mAP@0.5为94.8% (+1.6%),mAP@0.5-0.95为81.2%(+4.0%),其中mAP@0.5使用IoU阈值为0.50。在537张具有挑战性的尾端图像集上,错误检测率为1.30%,相对于YOLO11减少了45.2%。在性能评估阶段,我们首先基于平均处理效应(Average Treatment Effect, ATE)进行因果分析,量化各个架构组件和DiffuseMix的独立和共同贡献;同时,通过参数个数(Params, M)和每幅图像推理延迟(ms)来分析模型的效率。此外,我们构建并使用了一个专用的尾例数据集作为补充实验,以进一步验证这些改进在最困难场景中的鲁棒性和有效性。最后,我们引入了交叉条件测试集来进一步验证YOLO11-FC2T的泛化能力。以上结果表明,YOLO11-FC2T不仅提高了指标,而且具有可靠的泛化能力和稳定性。讨论:总体而言,YOLO11-FC2T解决了颜色过渡时期的关键检测挑战,为精准农业中的自动水果识别和计数提供了实用、便携的解决方案。以上结果表明,YOLO11-FC2T不仅提高了指标,而且具有可靠的泛化能力和稳定性。
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引用次数: 0
Recent advances in the use of plant growth promoting microorganisms for enhancing micropropagation efficiency. 植物促生微生物在提高微繁效率中的应用研究进展。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1699873
Gurudayal Ram Guru, Pramod W Ramteke, Csilla Veres, Csaba Vágvölgyi

Micropropagation is an important method within plant biotechnology, allowing the bulk multiplication of high-quality, disease-free plants to occur; however, micropropagation faces several challenges, such as microbial contamination, the expensive chemical products used, and losses occurring during the key acclimatization phase of the micropropagation process. Plant growth-promoting microorganisms (PGPMs) have been shown to ameliorate many of these challenges. These microorganisms support growth and development throughout micropropagation via mechanisms such as nutrient solubilization, phytohormone production and inhibition, and inactivation of pathogens. This review focuses on the potential of the use of PGPMs in the explant initiation, shoot multiplication, rooting, and acclimatization stages and is supported by recent research and the mechanisms of action, challenges, and future perspectives of PGPMs.

微繁是植物生物技术中的一种重要方法,可以实现高质量、无病植物的大量繁殖;然而,微繁殖面临着一些挑战,如微生物污染,使用昂贵的化学产品,以及在微繁殖过程的关键驯化阶段发生的损失。植物生长促进微生物(PGPMs)已被证明可以改善许多这些挑战。这些微生物通过营养物增溶、植物激素的产生和抑制以及病原体的失活等机制支持微繁殖过程中的生长和发育。本文综述了PGPMs在外植体起始、茎部增殖、生根和驯化阶段的应用潜力,并结合近年来的研究成果、作用机制、挑战和未来展望进行了综述。
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引用次数: 0
Editorial: Engineering plant-microbiomes to improve the health of economic crops. 社论:改造植物微生物群以改善经济作物的健康。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2026-01-01 DOI: 10.3389/fpls.2026.1782531
Zhen Wang, Ajay Kumar, Rachana Singh, Lucas Carvalho Basilio Azevedo, Manoj Kumar Solanki
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引用次数: 0
Physiological and transcriptomic analyses of exogenous calcium in boosting nitrogen use efficiency via oxidative and resistance pathways in peanuts. 外源钙通过氧化和抗性途径提高花生氮素利用效率的生理和转录组学分析。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1629610
Fengdan Xu, Liang Li, Xianzong Si, Yanyan Suo, Xiaolin Wang, Zhehui Zhang, Qian Li, Xiang Zhang

Introduction: Peanuts (Arachis hypogaea L.) exhibit a high demand for calcium, second only to nitrogen and potassium, with calcium playing a critical role in their growth, development, and nitrogen fixation. However, the mechanisms underlying calcium-mediated regulation of peanut growth and nitrogen fixation remain poorly understood.

Methods: In this study, we employed nitrogen-efficient (Puhua 66, Huayu 20) and nitrogen-inefficient (Puhua 28, Shanhua 14) peanut varieties in a two-year field experiment using a split-plot design. The main plots comprised two treatments: standard fertilization (CK) and calcium supplementation (Ca), while the sub-plots consisted of different peanut varieties. We analyzed growth parameters, physiological responses, and transcriptomic profiles.

Results: Our results demonstrated that calcium application significantly increased malondialdehyde (MDA) content in leaves while reducing peroxidase (POD) activity, enhancing pod dry matter accumulation, and promoting earlier plant maturation. Additionally, calcium application elevated the activities of nitrate reductase (NR) and glutamine synthetase (GS) (P < 0.01), thereby improving nitrogen and calcium accumulation in pods, their allocation efficiency, and the overall utilization rates of nitrogen and calcium fertilizers. Transcriptomic analysis revealed 166 differentially expressed genes (DEGs) in nitrogen-efficient varieties and 343 DEGs in nitrogen-inefficient varieties under calcium supplementation, with 67 DEGs shared between the two groups. Functional annotation and qRT-PCR validation were performed on these DEGs.Furthermore, weighted gene co-expression network analysis (WGCNA) indicated that calcium supplementation significantly up-regulated genes associated with sucrose synthase, β-amylase, GTPase-activating proteins, light-harvesting chlorophyll-protein complexes (Lhca2, Lhca3), photosynthetic electron transport (PetF, PetJ), phosphatidylinositol phospholipase C2, inositol-3-phosphate synthase, TMV resistance protein, ABC transporters, ethylene-responsive transcription factors (EIN1, EIN2, EIN3), alkylamine oxidase, glutamate dehydrogenase, and aspartate synthase.

Conclusion: These findings suggest that calcium application modulates carbohydrate metabolism, nitrogen assimilation, plant-pathogen interactions, and photosynthetic processes through differential gene expression, ultimately enhancing leaf physiological activity, dry matter partitioning, pod yield, and early maturation in peanuts.

花生(Arachis hypogaea L.)对钙的需求量仅次于氮和钾,钙在其生长发育和固氮中起着至关重要的作用。然而,钙介导花生生长和固氮调节的机制仍然知之甚少。方法:以氮肥高效品种(蒲花66号、花育20号)和氮肥低效品种(蒲花28号、善花14号)为材料,采用分畦设计进行为期2年的田间试验。主地块由标准施肥(CK)和补钙(Ca)两个处理组成,子地块由不同花生品种组成。我们分析了生长参数、生理反应和转录组谱。结果:施用钙显著提高叶片丙二醛(MDA)含量,降低过氧化物酶(POD)活性,促进荚果干物质积累,促进植株提前成熟。此外,施钙提高了硝态氮还原酶(NR)和谷氨酰胺合成酶(GS)活性(P < 0.01),从而提高了豆荚中氮、钙的积累和分配效率,提高了氮肥和钙的综合利用率。转录组学分析显示,补钙处理下,高效氮品种差异表达基因166个,低效氮品种差异表达基因343个,其中67个差异表达基因在两组间共有。对这些deg进行功能注释和qRT-PCR验证。此外,加权基因共表达网络分析(WGCNA)表明,补钙显著上调蔗糖合成酶、β-淀粉酶、gtpase激活蛋白、光收集叶绿素-蛋白复合物(Lhca2、Lhca3)、光合电子传递(PetF、PetJ)、磷脂酰肌醇磷脂酶C2、肌醇-3-磷酸合成酶、TMV抗性蛋白、ABC转运蛋白、乙烯应答转录因子(EIN1、EIN2、EIN3)、烷基胺氧化酶、谷氨酸脱氢酶和天冬氨酸合成酶。结论:施用钙通过差异基因表达调节花生碳水化合物代谢、氮同化、植物-病原体相互作用和光合过程,最终提高花生叶片生理活性、干物质分配、荚果产量和早熟性。
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引用次数: 0
Unraveling the invasiveness of Prosopis juliflora (Neltuma juliflora): seed traits and ecological implications. 柔花拟豆(Neltuma juliflora)的入侵性:种子性状及其生态学意义。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2025-01-01 DOI: 10.3389/fpls.2025.1721722
Kamel Chibani, Mengjie Fan, Hamada E Ali, Laya Al-Kharusi

Prosopis juliflora (Neltuma juliflora) is a globally invasive tree species threatening arid ecosystems. Its invasion success is driven by specific seed traits that function as an adaptive bet-hedging strategy. The impermeable seed coat enforces physical dormancy and enables the formation of a persistent soil seed bank that buffers against environmental stochasticity (population insurance). Conversely, rapid germination allows the species to exploit short-lived moisture pulses and outcompete native vegetation. Livestock-mediated endozoochory further facilitates directed dispersal by depositing scarified seeds in favorable microsites. This mini-review synthesizes current knowledge on these anatomical and physiological mechanisms and examines how they interact with climate change variables, specifically rising temperatures and altered precipitation on intensifying invasion dynamics. Finally, we discuss integrated management strategies targeting seed bank depletion and dispersal pathways.

柔花拟豆(Neltuma juliflora)是一种威胁干旱生态系统的全球性入侵树种。它的入侵成功是由特定的种子性状驱动的,这些性状起着适应性下注对冲策略的作用。不透水的种皮加强了物理休眠,使土壤种子库得以形成,缓冲了环境随机性(人口保险)。相反,快速发芽使该物种能够利用短暂的水分脉冲,并与本地植被竞争。家畜介导的内窥镜通过在有利的微位点沉积凝固的种子进一步促进定向传播。这篇小型综述综合了这些解剖和生理机制的现有知识,并研究了它们如何与气候变化变量相互作用,特别是温度上升和降水变化对入侵动力学的加剧。最后,我们讨论了针对种子库损耗和扩散途径的综合管理策略。
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引用次数: 0
Integrated effects of compost and nano foliar spray on the growth and fruit quality of sweet peppers under greenhouse conditions. 堆肥与纳米叶面喷施对温室条件下甜椒生长和果实品质的综合影响
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2026-01-01 DOI: 10.3389/fpls.2026.1743784
Hassan A A Sayed, Khaled A M Ali, Mahmoud A Abdelhamid, Ali S A Nofal, Saleh A S Hamad, Qinghui Lai, Mohamed Ahmed Moustafa, Gomaa G Abd El-Wahhab

Introduction: Enhancing vegetable growth and fruit quality in greenhouse production systems through sustainable nutrient management is a key challenge in modern horticulture. Therefore, this study evaluated the effects of mechanically produced compost and nano-foliar spray application on the growth and fruit quality of sweet pepper (Capsicum annuum L.) grown in a greenhouse under sand and clay soil conditions.

Methods: The experiment was conducted in a controlled plastic greenhouse located at Al-Azhar University, Cairo, Egypt (30° 2' 44'' N, 31° 15' 44'' E), over the 2022-2023 growing season. It was conducted using a factorial design consisting of compost at five volumetric rates (0%, 10%, 15%, 20%, and 25%), two soil types (sand and clay), and nano foliar spray at three concentrations (0, 1, and 2 cm3 L-1), with three replicates per treatment. Plant growth characteristics and fruit quality parameters were measured. The data were analyzed using three-way analysis of variance, and treatment means were compared using Duncan's multiple range test (p ≤ 0.05).

Results: The results indicated that the level of compost, soil type, and foliar nano-spray significantly affect pepper growth and fruit quality. The treatment (20% compost in sandy soil + 2 cm3 L-1 of nano-fertilizer) showed better performance in most vegetative growth characteristics and fruit quality traits compared to the other treatments, with a yield of 72.4 tons/ha. Furthermore, Multivariate analyses, including Principal Component Analysis (PCA) and correlation analysis, highlighted strong associations between yield and physiological traits related to photosynthetic capacity and antioxidant status.

Discussion: The proposed approach highlights the integration of organic amendments and nano-based nutrient management as an effective strategy to increase productivity and produce more sustainable vegetables.

导论:通过可持续的营养管理来提高温室生产系统中的蔬菜生长和水果质量是现代园艺的一个关键挑战。因此,本研究评估了机械堆肥和纳米叶面喷施对沙土和粘土条件下温室甜椒生长和果实品质的影响。方法:试验于2022-2023年生长季在埃及开罗Al-Azhar大学(30°2’44”N, 31°15’44”E)的受控塑料温室进行。试验采用因子设计,包括五种体积率(0%、10%、15%、20%和25%)的堆肥,两种土壤类型(砂和粘土),以及三种浓度(0、1和2 cm3 L-1)的纳米叶面喷雾,每个处理3个重复。测定植株生长特性和果实品质参数。资料分析采用三向方差分析,处理均数比较采用Duncan多重极差检验(p≤0.05)。结果:堆肥水平、土壤类型和叶面纳米喷雾对辣椒生长和果实品质有显著影响。沙土堆肥20% +纳米肥2 cm3 L-1处理在大多数营养生长特征和果实品质性状上均优于其他处理,产量可达72.4吨/公顷。此外,通过主成分分析(PCA)和相关分析等多变量分析,揭示了产量与光合能力和抗氧化状态等生理性状之间的相关性。讨论:提出的方法强调有机修正和纳米营养管理的整合是提高生产力和生产更可持续蔬菜的有效策略。
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引用次数: 0
QTL mapping for different resistant starch subtypes identified a superior haplotype balancing high RS content and relatively good eating and cooking qualities in rice. 对不同抗性淀粉亚型进行QTL定位,鉴定出水稻中具有较高RS含量和较好食煮品质的优势单倍型。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2026-01-01 DOI: 10.3389/fpls.2026.1763165
Cheng Liang, Yuesi Bu, Haoyang Xu, Xuemei Ma, Xueying Zhang, Tian Hu, Xunchao Xiang, Yungao Hu, Liang Xu

Resistant starch (RS) plays an important physiological role in maintaining human health. However, increasing RS content in rice often comes at the cost of deteriorating its eating and cooking qualities (ECQs). In order to address this conflict, we conducted co-localization quantitative trait locus (QTL) analysis for RS in raw rice flour (RSm), cooked rice (RSc), retrograded rice (RSr) along with correlation analysis between RS and ECQs, using recombinant inbred line (RIL) populations derived from a cross of CG133R and Javanica 22. A total of 33 QTLs associated with RSm, RSc, RSr, RSa, and RSb were identified. These included two major QTLs on choromosome 6 (Wx and SSIIa), and several novel minor-effect QTLs such as q2ERSc3.2, q2ERSb5.1, and q2ERSb9.1 on choromosome 3, 5 and 9, respectively. Wx accounted for 27.34%, 64.16%, 68.07%, 29.95%, and 39.62% of the phenotypic variance for RSm, RSc, RSr, RSa (RSm-RSc), and RSb (RSr-RSc), respectively. Meanwhile, SSIIa explained 42.42%, 17.82%, 14.09%, and 51.16% of the phenotypic variance for RSm, RSc, RSr, and RSa. Furthermore, the thermal and retrogradation properties demonstrated positive correlations with RSm, but negative correlations with RSc and RSr, which was attributed to the differential regulation of Wx and SSIIa. Wxa-SSIIaG-GC regulated high RSm and RSa, while Wxa-SSIIaG-TT significantly increased RSc and RSr. Notably, Wxa-SSIIaG-TT haplotype improved the rice ECQs by reducing gelatinization temperature, preventing retrogradation and enhancing viscosity properties. Thus, this study identified an excellent haplotype, Wxa-SSIIaG-TT , which enhanced RSc and RSr and improved rice ECQs, providing useful information for breeding high-RSc rice with a relative superior quality.

抗性淀粉(RS)在维持人体健康中起着重要的生理作用。然而,大米中RS含量的增加往往以其食用和烹饪品质(ECQs)的恶化为代价。为了解决这一矛盾,我们利用CG133R与Javanica 22杂交的重组自交系(RIL)群体,对生米粉(RSm)、熟米(RSc)和逆行米(RSr)的RS进行了共定位数量性状位点(QTL)分析,并分析了RS与ECQs的相关性。共鉴定出与RSm、RSc、RSr、RSa和RSb相关的qtl 33个。其中包括6号染色体上的两个主要qtl (Wx和SSIIa),以及3号、5号和9号染色体上的几个新的次要qtl,如q2ERSc3.2、q2ERSb5.1和q2ERSb9.1。Wx分别占RSm、RSc、RSr、RSa (RSm-RSc)和RSb (RSr-RSc)表型方差的27.34%、64.16%、68.07%、29.95%和39.62%。同时,SSIIa解释了RSm、RSc、RSr和RSa表型变异的42.42%、17.82%、14.09%和51.16%。热性能和退化性能与RSm呈正相关,而与RSc和RSr呈负相关,这可能与Wx和SSIIa的差异调控有关。Wxa-SSIIaG-GC调节高RSm和RSr,而Wxa-SSIIaG-TT显著提高RSc和RSr。值得注意的是,wxa - siiag - tt单倍型通过降低糊化温度、防止退化和提高粘度特性来改善水稻的ECQs。因此,本研究鉴定出了一个优良的单倍型Wxa-SSIIaG-TT,该单倍型提高了RSc和RSr,改善了水稻的ecq,为选育相对优质的高RSc水稻提供了有用的信息。
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引用次数: 0
Oxygen-releasing seed coating enhances yield and resource use efficiency in direct-seeded rice. 释氧包衣提高了水稻直播产量和资源利用效率。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2026-01-27 eCollection Date: 2026-01-01 DOI: 10.3389/fpls.2026.1746831
Yuanqing Shi, Huilai Yin, Yuemei Zhu, Ruhongji Liu, Qiqi Chen, Hongkun Xie, Binbin Liu, Qingyue Cheng, Chuanhai Shu, Ning Liu, Jun Ma, Yongjian Sun, Na Li, Zhiyuan Yang

To address seed decay in direct-seeded rice caused by waterlogging resulting from inadequate field leveling, this study conducted split-split-plot field experiments in Chongzhou City, Sichuan Province (103°38'31''-103°39'22'' E, 30°33'16''-30°33'54'' N). Specifically, two hybrid rice varieties previously identified as flood-resistant (V1: Jinyou 1319) and flood-sensitive (V2: Jingliangyou 1377) were assigned to the main plots, wet direct seeding (P1) and water direct seeding (P2) were compared in the subplots, and the coating (C1) and no-coating (C2) treatments were applied to the sub-subplots. In the coating treatment with water direct seeding, the seedling percentage of V1 and V2 increased by 25.58% and 78.54%, respectively, the number of effective panicles increased by 4.69% and 12.95%, respectively, and the seed setting rate improved by 15.05% and 16.64%, respectively. This synergy boosted the yields of the two varieties by 23.15% and 31.77%. In particular, the yield of V2 with water direct seeding with coating matched that under wet direct seeding without coating. With little difference in total energy consumption (≤ 1.88%), the sensitive variety with water direct seeding and coating saved irrigation water and labor inputs by 13% and 17%, respectively, in the demonstration area (calculated based on the input of the demonstration area). With water direct seeding, the stable oxygen supply from the coating improved the seed germination rate and seedling growth vitality, especially for the sensitive variety. Thus, the oxygen-releasing coating achieved yield increases, resource conservation, and efficiency enhancement synergistically, providing a valuable solution for the development of direct-seeded rice in China's hilly regions.

为了解决由于田间平整不充分而导致的内涝对直播水稻种子腐烂的影响,本研究在四川省崇州市(东经103°38'31 " -103°39'22 “,北纬30°33'16 ” -30°33'54 ")进行了分块田间试验。以2个抗旱杂交水稻品种(V1:金优1319)和水敏杂交水稻品种(V2:京两优1377)为主田,在小块上比较湿播(P1)和水播(P2),在小块上施用包衣(C1)和不包衣(C2)处理。包衣水直播处理下,V1和V2的出苗率分别提高了25.58%和78.54%,有效穗数分别提高了4.69%和12.95%,结实率分别提高了15.05%和16.64%。这种协同效应使两个品种的产量分别提高23.15%和31.77%。其中,有包衣水播与无包衣湿播的产量相当。在总能耗差异不大(≤1.88%)的情况下,采用水直播和包衣的敏感品种在示范区(按示范区投入计算)分别节约了13%和17%的灌溉用水和人工投入。水直接播种时,包衣稳定的供氧提高了种子发芽率和幼苗生长活力,对敏感品种尤其明显。因此,释放氧包衣实现了增产、节约资源和提高效率的协同效应,为中国丘陵地区水稻直播发展提供了有价值的解决方案。
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Frontiers in Plant Science
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