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Precision agriculture with YOLO-Leaf: advanced methods for detecting apple leaf diseases. YOLO-Leaf 的精准农业:检测苹果叶片病害的先进方法。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1452502
Tong Li, Liyuan Zhang, Jianchu Lin

The detection of apple leaf diseases plays a crucial role in ensuring crop health and yield. However, due to variations in lighting and shadow, as well as the complex relationships between perceptual fields and target scales, current detection methods face significant challenges. To address these issues, we propose a new model called YOLO-Leaf. Specifically, YOLO-Leaf utilizes Dynamic Snake Convolution (DSConv) for robust feature extraction, employs BiFormer to enhance the attention mechanism, and introduces IF-CIoU to improve bounding box regression for increased detection accuracy and generalization ability. Experimental results on the FGVC7 and FGVC8 datasets show that YOLO-Leaf significantly outperforms existing models in terms of detection accuracy, achieving mAP50 scores of 93.88% and 95.69%, respectively. This advancement not only validates the effectiveness of our approach but also highlights its practical application potential in agricultural disease detection.

苹果叶片病害的检测对确保作物健康和产量起着至关重要的作用。然而,由于光照和阴影的变化,以及感知区域和目标尺度之间的复杂关系,目前的检测方法面临着巨大的挑战。为了解决这些问题,我们提出了一种名为 YOLO-Leaf 的新模型。具体来说,YOLO-Leaf 利用动态蛇卷积(DSConv)进行鲁棒特征提取,采用 BiFormer 增强注意力机制,并引入 IF-CIoU 改进边界框回归,从而提高检测精度和泛化能力。在 FGVC7 和 FGVC8 数据集上的实验结果表明,YOLO-Leaf 的检测准确率明显优于现有模型,mAP50 分数分别达到 93.88% 和 95.69%。这一进步不仅验证了我们方法的有效性,也凸显了其在农业疾病检测中的实际应用潜力。
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引用次数: 0
Synergistic application of melatonin and silicon oxide nanoparticles modulates reactive oxygen species generation and the antioxidant defense system: a strategy for cadmium tolerance in rice. 褪黑激素和氧化硅纳米颗粒的协同应用可调节活性氧的生成和抗氧化防御系统:水稻耐镉的一种策略。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1484600
Mohammad Faisal, Mohammad Faizan, Sipan Soysal, Abdulrahman A Alatar

Unfavorable environmental conditions pose a major barrier to sustainable agriculture. Among the various innovative strategies developed to protect plants from abiotic stress, the use of phytohormones and nanoparticles as "stress mitigators" has emerged as one of the most important and promising approaches. The objective of this study was to observe the protective role of melatonin (Mel) and silicon oxide nanoparticles (SiO-NPs) in rice (Oryza sativa L.) seedlings under cadmium (Cd) stress. Rice seedlings have reduced growth and phytochemical attributes when grown in Cd-contaminated (0.8 mM) pots. Seedlings under Cd stress had 38% less shoot length (SL), 53% total soluble sugar (TSS) and 57% protein content. However, superoxide dismutase (SOD), hydrogen peroxide (H2O2) and malondialdehyde (MDA) increased by 51%, 37% and 34%, respectively, under Cd stress. Beside this, activities such as peroxidase (POX) also elevated in the plants subjected with Cd-stress. In contrast, Mel (100 µm) as foliar spray and SiO-NPs (100 mg/L) as root dipping reduced oxidative stress in rice seedlings under Cd stress by reducing reactive oxygen species (ROS) generation. Furthermore, the application of Mel and/or SiO-NPs significantly increased the activity of antioxidative enzymes that scavenge ROS. The combined application of SiO-NPs and Mel increased growth, gas exchange and photosynthetic attributes, chlorophyll value, and protein content. It causes alleviation in the activity of SOD, CAT and POX by 73%, 62% and 65%, respectively. Overall, this study findings show that Mel and/or SiO-NPs can potentially protect the rice crop against oxidative damage under Cd stress.

不利的环境条件是可持续农业的一大障碍。在保护植物免受非生物胁迫的各种创新策略中,使用植物激素和纳米颗粒作为 "胁迫缓解剂 "已成为最重要和最有前途的方法之一。本研究的目的是观察褪黑激素(Mel)和氧化硅纳米颗粒(SiO-NPs)在镉(Cd)胁迫下对水稻(Oryza sativa L.)幼苗的保护作用。水稻秧苗在镉污染(0.8 mM)的花盆中生长时,其生长和植物化学属性均有所下降。镉胁迫下的秧苗芽长(SL)减少了 38%,总可溶性糖(TSS)减少了 53%,蛋白质含量减少了 57%。然而,在镉胁迫下,超氧化物歧化酶(SOD)、过氧化氢(H2O2)和丙二醛(MDA)分别增加了 51%、37% 和 34%。此外,过氧化物酶(POX)等活性也在镉胁迫下升高。相反,叶面喷洒 Mel(100 微米)和根部浸泡 SiO-NPs(100 毫克/升)可减少活性氧(ROS)的生成,从而降低水稻秧苗在镉胁迫下的氧化胁迫。此外,施用 Mel 和/或 SiO-NPs 能显著提高清除 ROS 的抗氧化酶的活性。联合施用 SiO-NPs 和 Mel 能提高生长、气体交换和光合特性、叶绿素值和蛋白质含量。它使 SOD、CAT 和 POX 的活性分别降低了 73%、62% 和 65%。总之,这项研究结果表明,在镉胁迫下,Mel 和/或 SiO-NPs 有可能保护水稻作物免受氧化损伤。
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引用次数: 0
The microbiome and metatranscriptome of a panel from the Sarracenia mapping population reveal complex assembly and function involving host influence. Sarracenia 图谱群体的微生物组和元转录组揭示了涉及宿主影响的复杂组装和功能。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1445713
Jiazhang Cai, Iqra Mohsin, Willie Rogers, Mengrui Zhang, Lin Jiang, Russell Malmberg, Magdy Alabady

Sarracenia provide an optimal system for deciphering the host-microbiome interactions at various levels. We analyzed the pitcher microbiomes and metatranscriptomes of the parental species, and F1 and F2 generations from the mapping population (Sarracenia purpurea X Sarracenia psittacina) utilizing high-throughput sequencing methods. This study aimed to examine the host influences on the microbiome structure and function and to identify the key microbiome traits. Our quality datasets included 8,892,553 full-length bacterial 16s rRNA gene sequences and 65,578 assembled metatranscripts with microbial protein annotations. The correlation network of the bacterial microbiome revealed the presence of 3-7 distinct community clusters, with 8 hub and 19 connector genera. The entire microbiome consisted of viruses, bacterial, archaea, and fungi. The richness and diversity of the microbiome varied among the parental species and offspring genotypes despite being under the same greenhouse environmental conditions. We have discovered certain microbial taxa that are genotype-enriched, including the community hub and connector genera. Nevertheless, there were no significant differences observed in the functional enrichment analysis of the metatranscriptomes across the different genotypes, suggesting a functional convergence of the microbiome. We found that the pitcher microcosm harbors both rhizosphere and phyllosphere microbiomes within its boundaries, resulting in a structurally diverse and functionally complex microbiome community. A total of 50,424 microbial metatranscripts were linked to plant growth-promoting microbial proteins. We show that this complex pitcher microbiome possesses various functions that contribute to plant growth promotion, such as biofertilization, bioremediation, phytohormone signaling, stress regulation, and immune response stimulation. Additionally, the pitcher microbiome exhibits traits related to microbe-microbe interactions, such as colonization of plant systems, biofilm formation, and microbial competitive exclusion. In summary, the demonstrated taxonomical divergence and functionally convergence of the pitcher microbiome are impacted by the host genetics, making it an excellent system for discovering novel beneficial microbiome traits.

Sarracenia 提供了一个最佳系统,用于在不同层面上解读宿主与微生物组之间的相互作用。我们利用高通量测序方法,分析了亲本物种的坑道微生物组和元转录组,以及映射群体(Sarracenia purpurea X Sarracenia psittacina)的F1和F2代。这项研究旨在研究宿主对微生物组结构和功能的影响,并确定微生物组的关键性状。我们的高质量数据集包括 8,892,553 个全长细菌 16s rRNA 基因序列和 65,578 个带有微生物蛋白质注释的组装元转录本。细菌微生物组的相关网络显示存在 3-7 个不同的群落集群,其中有 8 个中心属和 19 个连接属。整个微生物组由病毒、细菌、古细菌和真菌组成。尽管处于相同的温室环境条件下,亲本物种和子代基因型的微生物组的丰富度和多样性各不相同。我们发现某些微生物类群具有基因型富集性,包括群落中心和连接属。然而,在不同基因型的元转录组功能富集分析中没有观察到明显的差异,这表明微生物组的功能趋同。我们发现,投手微生态系统的边界内同时存在根瘤层和叶球层微生物群落,从而形成了一个结构多样、功能复杂的微生物群落。共有 50,424 个微生物元转录本与促进植物生长的微生物蛋白质相关联。我们的研究表明,这种复杂的投手微生物群具有促进植物生长的各种功能,如生物肥料、生物修复、植物激素信号转导、胁迫调节和免疫反应刺激。此外,箭毒微生物群还表现出与微生物间相互作用有关的特征,如植物系统定殖、生物膜形成和微生物竞争排斥。总之,投手微生物组在分类学上的差异和功能上的趋同受到宿主遗传学的影响,使其成为发现新型有益微生物组特征的绝佳系统。
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引用次数: 0
Motion behavior of droplets on curved leaf surfaces driven by airflow. 气流驱动曲面叶面上水滴的运动行为。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1450831
Zhou-Ming Gao, Wei Hu, Xiao-Ya Dong, Xiao-Yuan Zhao, Song Wang, Jian Chen, Bai-Jing Qiu

In air-assisted spraying, pesticide droplet retention on crop leaves is key to evaluating spray effectiveness. However, airflow can deform leaves, reducing droplet retention and affecting spray performance. This study used wind tunnels and high-speed cameras to capture leaf deformation at different airflow speeds and the motion of droplets on curved leaf surfaces. The results showed that leaf curvature during bending deformation is generally less than 0.05 mm-1. Critical wind speed for droplet movement is negatively correlated with droplet size and leaf curvature, with a 24.8% difference between different leaf curvatures and a 17.5% difference between droplet sizes. The droplet's dimensionless shape variable is positively correlated with both droplet size and leaf curvature. The maximum shape variable on curved leaves reaches 0.24, with acceleration differences of about 30%, while droplets of different sizes show a maximum shape variable of 0.18 and an acceleration difference of up to 68%. These findings enhance understanding of droplet-leaf interactions and provide insights for improving pesticide efficiency.

在空气辅助喷洒中,农药液滴在作物叶片上的滞留是评估喷洒效果的关键。然而,气流会使叶片变形,从而减少雾滴留存,影响喷雾效果。本研究利用风洞和高速相机捕捉不同气流速度下的叶片变形以及液滴在弯曲叶片表面的运动。结果表明,弯曲变形时的叶片曲率一般小于 0.05 mm-1。液滴运动的临界风速与液滴大小和叶片曲率呈负相关,不同叶片曲率之间的差异为 24.8%,不同液滴大小之间的差异为 17.5%。液滴的无量纲形状变量与液滴大小和叶片曲率都呈正相关。弯曲叶片上的最大形状变量为 0.24,加速度差异约为 30%,而不同大小液滴的最大形状变量为 0.18,加速度差异高达 68%。这些发现加深了人们对液滴与叶片相互作用的理解,并为提高杀虫剂效率提供了启示。
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引用次数: 0
Rice Na+ absorption mediated by OsHKT2;1 affected Cs+ translocation from root to shoot under low K+ environments. 在低 K+环境下,OsHKT2;1 介导的水稻 Na+ 吸收影响 Cs+ 从根部向嫩枝的转移。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1477223
Satomi Kanno, Shigeto Fujimura, Junko Takahashi, Chenyu Li, Takuro Shinano, Shin-Ichi Nakamura, Nathalie Leonhardt, Jun Furukawa

137Cs diffused into the environment due to a nuclear power plant accident has caused serious problems for safe crop production. In plants, Cs+ is similar in its ionic form to K+. Cs+ is absorbed and transported mainly by the K+ transport mechanism. However, the full picture of the genes contributing to Cs+ transport and the transport mechanism of rice is still unclear. This study focused on OsHKT2;1, a candidate Cs+ transporter under low K+ conditions. To verify the ability of OsHKT2;1 to transport Cs+, the OsHKT2;1 mutant (hkt2;1) was grown in a 137Cs-contaminated paddy field in Fukushima. The 137Cs concentration in hkt2;1 aboveground was higher than in the wild type (WT), and the K concentration in these samples did not change between WT and hkt2;1, whereas the Na concentration was lower in hkt2;1. Uptake experiments with radioactive tracers (22Na+, 43K+, and 137Cs+) in hydroponic systems with different elemental compositions showed a negative correlation between Na+ and Cs+ accumulation in rice shoot cultivated under low K+ conditions. These results indicated that OsHKT2;1 does not directly contribute to Cs+ uptake but is an important factor in regulating Cs+ translocation by controlling Na+ accumulation. This indicates the possibility of controlling rice Cs content by regulating the Na+ environment during cultivation.

核电站事故导致 137Cs 扩散到环境中,给农作物的安全生产带来了严重问题。在植物体内,Cs+ 的离子形式与 K+ 相似。Cs+ 主要通过 K+ 运输机制吸收和运输。然而,对水稻 Cs+ 转运基因及其转运机制的全貌尚不清楚。本研究的重点是低 K+条件下的候选 Cs+转运体 OsHKT2;1。为了验证 OsHKT2;1 转运 Cs+ 的能力,在福岛 137Cs 污染的稻田中种植了 OsHKT2;1 突变体(hkt2;1)。在不同元素组成的水培系统中,放射性示踪剂(22Na+、43K+ 和 137Cs+)的吸收实验表明,在低 K+条件下栽培的水稻幼芽中,Na+ 和 Cs+的积累呈负相关。这些结果表明,OsHKT2;1 并不直接参与 Cs+ 的吸收,而是通过控制 Na+ 积累来调节 Cs+ 转位的一个重要因素。这表明有可能在栽培过程中通过调节 Na+ 环境来控制水稻的 Cs 含量。
{"title":"Rice Na<sup>+</sup> absorption mediated by OsHKT2;1 affected Cs<sup>+</sup> translocation from root to shoot under low K<sup>+</sup> environments.","authors":"Satomi Kanno, Shigeto Fujimura, Junko Takahashi, Chenyu Li, Takuro Shinano, Shin-Ichi Nakamura, Nathalie Leonhardt, Jun Furukawa","doi":"10.3389/fpls.2024.1477223","DOIUrl":"https://doi.org/10.3389/fpls.2024.1477223","url":null,"abstract":"<p><p><sup>137</sup>Cs diffused into the environment due to a nuclear power plant accident has caused serious problems for safe crop production. In plants, Cs<sup>+</sup> is similar in its ionic form to K<sup>+</sup>. Cs<sup>+</sup> is absorbed and transported mainly by the K<sup>+</sup> transport mechanism. However, the full picture of the genes contributing to Cs<sup>+</sup> transport and the transport mechanism of rice is still unclear. This study focused on OsHKT2;1, a candidate Cs<sup>+</sup> transporter under low K<sup>+</sup> conditions. To verify the ability of OsHKT2;1 to transport Cs<sup>+</sup>, the <i>OsHKT2;1</i> mutant (<i>hkt2;1</i>) was grown in a <sup>137</sup>Cs-contaminated paddy field in Fukushima. The <sup>137</sup>Cs concentration in <i>hkt2;1</i> aboveground was higher than in the wild type (WT), and the K concentration in these samples did not change between WT and <i>hkt2;1</i>, whereas the Na concentration was lower in <i>hkt2;1</i>. Uptake experiments with radioactive tracers (<sup>22</sup>Na<sup>+</sup>, <sup>43</sup>K<sup>+</sup>, and <sup>137</sup>Cs<sup>+</sup>) in hydroponic systems with different elemental compositions showed a negative correlation between Na<sup>+</sup> and Cs<sup>+</sup> accumulation in rice shoot cultivated under low K<sup>+</sup> conditions. These results indicated that OsHKT2;1 does not directly contribute to Cs<sup>+</sup> uptake but is an important factor in regulating Cs<sup>+</sup> translocation by controlling Na<sup>+</sup> accumulation. This indicates the possibility of controlling rice Cs content by regulating the Na<sup>+</sup> environment during cultivation.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":null,"pages":null},"PeriodicalIF":4.1,"publicationDate":"2024-10-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11518805/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142545034","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Speciation and evolution of growth form in Adesmia D. C. (Dalbergieae, Fabaceae): the relevance of Andean uplift and aridification. Adesmia D. C.(Dalbergieae,豆科)的物种和生长形式的进化:安第斯山隆升和干旱化的相关性。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1403273
Fernanda Pérez, Nicolás Lavandero, Luis Felipe Hinojosa, Mauricio Cisternas, Daniela Araneda, Nicolás Pinilla, Valeska Moraga

The Andean uplift and the concomitant aridification drove the rapid diversification of several plant lineages that were able to colonize warmer and drier habitats at low elevations and wetter and colder habitats at high elevations. These transitions may be facilitated by shifts in plant strategies to cope with drought and cold, which in turn can trigger episodes of accelerated species diversification. Here, we used four nuclear DNA markers to infer phylogenetic relationships of 80 Adesmia species of annuals, perennial herbs, shrubs and small shrubs that occur in Chile and Argentina. We reconstructed ancestral states for area, climatic niche and growth form to explore how Andean uplift and aridification promoted Adesmia diversification. We also performed logistic and linear regression analyses between different components of growth form (life span, woodiness and plant height) and climate. Finally, we estimated speciation rates across the phylogeny. Our results suggest that the ancestor of Chilean Adesmia was a perennial herb that probably originated in the high Andes of northern and central Chile. The low elevations of Central Chile were colonized in the late Miocene, whereas the high latitudes of Patagonia and the hyperarid coastal Atacama Desert were colonized repeatedly since Pliocene by lineages with different growth forms. Multiple and bidirectional transitions between annual and perennial habits and between herbaceous and woody habits were detected. These shifts were not correlated with climate, suggesting that the different growth forms are alternative and successful strategies to survive unfavorable seasons of both desert and high Andes. Net diversification analysis indicated a constant rate of diversification, suggesting that the high species diversity of Adesmia that occur in Chile is due to a uniform speciation process rather than to accelerated episodes of speciation.

安第斯山脉的隆升以及随之而来的干旱化推动了一些植物品系的快速多样化,这些植物品系能够在低海拔地区更温暖、更干燥的栖息地和高海拔地区更潮湿、更寒冷的栖息地定居。植物应对干旱和寒冷策略的转变可能会促进这些转变,反过来又会引发物种加速多样化。在这里,我们利用四种核DNA标记来推断智利和阿根廷的80个一年生、多年生草本、灌木和小灌木Ademia物种的系统发育关系。我们重建了面积、气候生态位和生长形式的祖先状态,以探索安第斯山隆升和干旱化是如何促进 Adesmia 多样化的。我们还对生长形式的不同组成部分(寿命、木质度和植株高度)与气候之间进行了逻辑和线性回归分析。最后,我们估算了整个系统发育过程中的物种分化率。我们的研究结果表明,智利 Adesmia 的祖先是一种多年生草本植物,可能起源于智利北部和中部的安第斯高地。智利中部的低海拔地区在中新世晚期被殖民化,而巴塔哥尼亚的高纬度地区和阿塔卡马沙漠的高干旱沿海地区自上新世以来被具有不同生长形式的品系反复殖民化。在一年生和多年生习性之间以及草本和木本习性之间发现了多种双向转变。这些转变与气候无关,表明不同的生长形式是在沙漠和安第斯高原不利季节生存的成功策略。净多样化分析表明,物种多样化的速度是恒定的,这表明智利出现的高物种多样性是由于统一的物种演化过程,而不是由于物种演化的加速。
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引用次数: 0
Strategies for RNA m6A modification application in crop improvement. 在作物改良中应用 RNA m6A 修饰的策略。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1477240
Jun Tang, Xuemin Wang
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引用次数: 0
OsPDIL1-5: dual role in promoting growth and development while modulating drought stress tolerance in rice (Oryza sativa L.). OsPDIL1-5:在促进水稻(Oryza sativa L.)生长和发育的同时调节干旱胁迫耐受性的双重作用。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1479726
Jilin Chen, Jin Zhang, Chao Fang, Lijun Ren, Tong Lan, Weiren Wu, Tao Lan

Drought tolerance and plant growth are critical factors affecting rice yield, and identifying genes that can enhance these traits is essential for improving crop resilience and productivity. Using a growth-depressed and drought-tolerant (gddt) mutant of the indica rice variety Huanghuazhan (HHZ) generated by radiation mutagenesis, we discovered a novel gene, GDDT, which plays a dual role in plant biology: it acts as a positive regulator of growth and development, but as a negative regulator of drought resistance. The gddt mutant displayed a marked reduction in plant growth and seed setting rate, yet exhibited an unexpected advantage in terms of drought tolerance. Our research revealed that the enhanced drought tolerance of the gddt mutant is primarily due to a decrease in stomatal size, density, and aperture, which reduces water loss, and an activation of the reactive oxygen species (ROS) scavenging system, which helps protect the plant from oxidative stress. These physiological changes are observed both under drought conditions and in normal growth conditions. This discovery highlights the importance of GDDT as a pleiotropic gene with significant implications for both plant growth and drought resistance. Through map-based cloning, we determined that the protein disulfide isomerase-like (PDIL) gene OsPDIL1-5 is the GDDT gene. The protein encoded by this gene was localized to the endoplasmic reticulum, consistent with its predicted function. Our findings provide new insights into the role of PDIL genes in rice and suggest that further study of GDDT could lead to a better understanding of how these genes contribute to the complex interplay between plant growth, development, and stress responses. This knowledge could pave the way for the development of rice varieties that are more resilient to drought, thereby increasing crop yields and ensuring food security in water-limited environments.

耐旱性和植物生长是影响水稻产量的关键因素,而鉴定能够增强这些性状的基因对于提高作物的抗逆性和生产力至关重要。利用辐射诱变产生的籼稻品种黄花占(HHZ)的生长受抑制和耐旱突变体(gddt),我们发现了一个新基因 GDDT,它在植物生物学中扮演着双重角色:既是生长发育的正调控因子,又是抗旱性的负调控因子。gddt 突变体的植株生长和结籽率明显下降,但在耐旱性方面却表现出意想不到的优势。我们的研究发现,gddt 突变体耐旱性增强的主要原因是气孔的大小、密度和孔径减小,从而减少了水分流失,同时激活了活性氧(ROS)清除系统,有助于保护植物免受氧化应激。这些生理变化在干旱条件下和正常生长条件下都能观察到。这一发现凸显了 GDDT 作为多效基因的重要性,它对植物生长和抗旱性都有重要影响。通过基于图谱的克隆,我们确定蛋白二硫异构酶样(PDIL)基因 OsPDIL1-5 就是 GDDT 基因。该基因编码的蛋白质定位于内质网,与其预测的功能一致。我们的研究结果为了解 PDIL 基因在水稻中的作用提供了新的视角,并表明对 GDDT 基因的进一步研究可使人们更好地了解这些基因如何促进植物生长、发育和胁迫反应之间复杂的相互作用。这些知识可以为开发抗旱能力更强的水稻品种铺平道路,从而提高作物产量,确保限水环境下的粮食安全。
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引用次数: 0
The nucleolin MoNsr1 plays pleiotropic roles in the pathogenicity and stress adaptation in the rice blast fungus Magnaporthe oryzae. 核苷酸 MoNsr1 在稻瘟病菌 Magnaporthe oryzae 的致病性和胁迫适应中发挥多向作用。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1482934
Zhen Zhang, Mohammad Shafiqul Islam, Jiuzhi Xia, Xiangyang Feng, Muhammad Noman, Jing Wang, Zhongna Hao, Haiping Qiu, Rongyao Chai, Yingying Cai, Yanli Wang, Jiaoyu Wang

The rice blast disease, caused by the fungus Magnaporthe oryzae, is a significant agricultural problem that adversely impacts rice production and food security. Understanding the precise molecular pathways involved in the interaction between the pathogen and its host is crucial for developing effective disease management strategies. This study examines the crucial function of the nucleolin MoNsr1 in regulating M. oryzae physiological functions. ΔMoNsr1 deletion mutants showed reduced fungal growth, asexual sporulation, and pathogenicity compared to the wild-type. Mutants exhibited impaired conidial germination and appressoria formation, reducing infection progression. Additionally, ΔMoNsr1 deletion mutant had less turgor pressure, confirming that MoNsr1 is essential for cell wall biogenesis and resistant to external stresses. Furthermore, ΔMoNsr1 deletion mutant showed enhanced sensitivity to oxidative stress, reactive oxygen species, and cold tolerance. Our results offer a thorough understanding of the function of MoNsr1 in the virulence and stress-resilient capability in M. oryzae. These findings provide insights into the novel targets and contribute to the emergence of innovative approaches for managing rice blast disease.

由真菌 Magnaporthe oryzae 引起的稻瘟病是一个严重的农业问题,对水稻生产和粮食安全造成了不利影响。了解病原体与其宿主相互作用的精确分子途径对于制定有效的病害管理策略至关重要。本研究探讨了核小体 MoNsr1 在调控 M. oryzae 生理功能中的关键功能。与野生型相比,ΔMoNsr1缺失突变体的真菌生长、无性孢子和致病性均有所降低。突变体的分生孢子萌发和附属体形成受到影响,从而降低了感染进程。此外,ΔMoNsr1缺失突变体的张力压力较低,这证实了 MoNsr1 对细胞壁生物形成和抵抗外部压力至关重要。此外,ΔMoNsr1缺失突变体对氧化胁迫、活性氧和耐寒性的敏感性增强。我们的研究结果有助于深入了解 MoNsr1 在口蹄疫霉菌毒力和抗逆能力中的功能。这些发现提供了对新靶标的见解,并有助于开发出管理稻瘟病的创新方法。
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引用次数: 0
Analysis of phylogenetic relationships in Macadamia shows evidence of extensive reticulate evolution. 对澳洲坚果系统进化关系的分析表明,存在广泛的网状进化证据。
IF 4.1 2区 生物学 Q1 PLANT SCIENCES Pub Date : 2024-10-15 eCollection Date: 2024-01-01 DOI: 10.3389/fpls.2024.1394244
Sachini Lakmini Manatunga, Agnelo Furtado, Bruce Topp, Mobashwer Alam, Patrick J Mason, Ardashir Kharabian-Masouleh, Robert J Henry

The genus Macadamia in the Proteaceae family includes four species native to Australia. Two of the four species, M. integrifolia and M. tetraphylla, have recently been utilized to generate domesticated macadamia varieties, grown for their edible nuts. To explore diversity in macadamia genetic resources, a total of 166 wild genotypes, representing all four species, were sequenced. The four species were clearly distinguished as four separate clades in a phylogenetic analysis of the nuclear genome (based upon concatenated nuclear gene CDS and SNPs). The two larger species (M. integrifolia and M. tetraphylla) formed a clade, that had diverged from a clade including the smaller species (M. ternifolia and M. jansenii). The greatest diversity in nuclear and chloroplast genomes was found in the more widely distributed M. integrifolia while the rare M. jansenii showed little diversity. The chloroplast phylogeny revealed a much more complex evolutionary history. Multiple chloroplast capture events have resulted in chloroplast genome clades, including genotypes from different species. This suggests extensive reticulate evolution in Macadamia despite the emergence of the four distinct species that are supported by the analysis of their nuclear genomes. The chloroplast genomes showed strong associations with geographical distribution reflecting limited maternal gene movement in these species that have large seeds. The nuclear genomes showed lesser geographical differences, probably reflecting the longer distance pollen movement. This improved understanding of the distribution of diversity in Macadamia will aid in the conservation of these rare species now found in highly fragmented rainforest remnants.

山榄科澳洲坚果属包括原产于澳大利亚的四个物种。这四个物种中的两个,即M. integrifolia和M. tetraphylla,最近被用来培育驯化的澳洲坚果品种,种植的目的是为了获得可食用的坚果。为了探索澳洲坚果遗传资源的多样性,我们对代表所有四个物种的 166 个野生基因型进行了测序。在核基因组系统发育分析中,这四个物种被明确区分为四个独立的支系(基于核基因 CDS 和 SNPs 连接)。两个较大的物种(M. integrifolia 和 M. tetraphylla)形成一个支系,该支系从包括较小物种(M. ternifolia 和 M. jansenii)在内的支系中分化出来。分布较广的 M. integrifolia 的核基因组和叶绿体基因组具有最大的多样性,而罕见的 M. jansenii 则几乎没有多样性。叶绿体系统发育揭示了更为复杂的进化历史。多次叶绿体捕获事件产生了叶绿体基因组支系,包括来自不同物种的基因型。这表明尽管出现了四个不同的物种,但澳洲坚果的网状进化非常广泛,核基因组分析也支持了这一点。叶绿体基因组显示出与地理分布的紧密联系,反映出在这些拥有大型种子的物种中母本基因的移动有限。核基因组显示的地理分布差异较小,这可能反映了花粉移动的距离较长。对澳洲坚果多样性分布的进一步了解将有助于保护这些目前在高度破碎的雨林遗迹中发现的稀有物种。
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Frontiers in Plant Science
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