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Deriving comprehensive literature trends on multi-omics analysis studies in autism spectrum disorder using literature mining pipeline. 利用文献挖掘管道得出自闭症谱系障碍多组学分析研究的综合文献趋势。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1400412
Dattatray Mongad, Indhupriya Subramanian, Anamika Krishanpal

Autism spectrum disorder (ASD) is characterized by highly heterogenous abnormalities in functional brain connectivity affecting social behavior. There is a significant progress in understanding the molecular and genetic basis of ASD in the last decade using multi-omics approach. Mining this large volume of biomedical literature for insights requires considerable amount of manual intervention for curation. Machine learning and artificial intelligence fields are advancing toward simplifying data mining from unstructured text data. Here, we demonstrate our literature mining pipeline to accelerate data to insights. Using topic modeling and generative AI techniques, we present a pipeline that can classify scientific literature into thematic clusters and can help in a wide array of applications such as knowledgebase creation, conversational virtual assistant, and summarization. Employing our pipeline, we explored the ASD literature, specifically around multi-omics studies to understand the molecular interplay underlying autism brain.

自闭症谱系障碍(ASD)的特征是影响社交行为的大脑功能连接出现高度异质性异常。在过去十年中,利用多组学方法在了解 ASD 的分子和遗传基础方面取得了重大进展。要从大量的生物医学文献中挖掘洞察力,需要大量的人工干预。机器学习和人工智能领域正朝着简化非结构化文本数据挖掘的方向发展。在此,我们展示了我们的文献挖掘管道,以加快从数据到见解的过程。通过使用主题建模和生成式人工智能技术,我们展示了一个可将科学文献分类为主题集群的管道,该管道有助于知识库创建、对话式虚拟助手和摘要等广泛应用。利用我们的管道,我们探索了自闭症文献,特别是围绕多组学研究,以了解自闭症大脑的分子相互作用。
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引用次数: 0
Autistic adults exhibit holistic face processing: evidence from inversion and composite face effects. 成人自闭症患者表现出整体性的人脸处理能力:来自倒置和复合人脸效应的证据。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1393987
En-Yun Hsiung, Sarina Hui-Lin Chien

Holistic processing is commonly measured by the face inversion effect (FIE) and the composite face effect (CFE). Previous studies examining whether individuals with autism spectrum disorder (ASD) employ holistic processing using either FIE or CFE have reported inconclusive results. By adopting a customized composite face paradigm, the present study aims to simultaneously assess both the inversion and the composite effects of holistic processing in autistic and neurotypical adults. We tested 24 adults with ASD and 24 neurotypical (NT) adults matched in age, gender, and years of education. Participants viewed sequentially presented composite faces in three Presentation Modes (aligned, inverted, and misaligned) with three Stimuli Conditions (same, composite, and different) and judged whether the top half was the same. For the dependent variables, we calculated a "performance index" in the form of the accuracy/response time of each stimuli condition in each presentation mode. The FIE and CFE were computed to index the magnitude of holistic processing. Our results showed that the NT group responded more accurately in less time than the ASD group across task conditions. Notably, both the NT and the ASD groups exhibited a significant FIE with similar magnitude. Likewise, both the NT and the ASD groups showed a greater-than-zero CFE. Moreover, individuals' CFE positively correlated with FIE and negatively correlated with the AQ scores for all participants. In summary, individuals with ASD exhibit holistic processing when viewing faces, evidenced by the presence of both FIE and CFE and the positive correlations between the two effects.

整体处理通常通过面孔倒置效应(FIE)和复合面孔效应(CFE)来测量。之前的研究使用 FIE 或 CFE 对自闭症谱系障碍(ASD)患者是否进行整体加工进行了研究,但结果并不一致。本研究采用定制的复合面孔范式,旨在同时评估自闭症和神经畸形成人整体加工的反转效应和复合效应。我们测试了 24 名患有自闭症的成年人和 24 名神经典型(NT)成年人,他们的年龄、性别和受教育年限均匹配。受试者在三种呈现模式(对齐、倒置和错位)和三种刺激条件(相同、复合和不同)下观看依次呈现的复合面孔,并判断上半部分是否相同。对于因变量,我们以每种呈现模式下每种刺激条件的准确率/反应时间的形式计算 "表现指数"。FIE 和 CFE 的计算则是为了反映整体处理的程度。我们的结果显示,在各种任务条件下,NT 组比 ASD 组用更短的时间做出更准确的反应。值得注意的是,NT 组和 ASD 组都表现出显著的 FIE,且幅度相似。同样,NT 组和 ASD 组的 CFE 都大于零。此外,所有参与者的 CFE 与 FIE 呈正相关,而与 AQ 分数呈负相关。总之,ASD 患者在观看面孔时会表现出整体处理,这一点可以从 FIE 和 CFE 的存在以及这两种效应之间的正相关性中得到证明。
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引用次数: 0
Influence of an inspiratory muscle fatigue protocol on older adults on respiratory muscle strength and heart rate variability. A randomized controlled trial. 吸气肌肉疲劳方案对老年人呼吸肌力量和心率变异性的影响。随机对照试验。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1423927
Arturo Ladriñán-Maestro, Jorge Sánchez-Infante, Daniel Martín-Vera, José Ángel Del-Blanco-Muñiz, Javier Merino-Andrés, Alberto Sánchez-Sierra

Introduction: Inspiratory muscle fatigue has been shown to have effects on the autonomic nervous system and physical condition. This study aimed to evaluate the influence of an inspiratory muscle fatigue protocol on respiratory muscle strength and heart rate variability in older adults.

Materials and methods: A randomized controlled clinical trial with double-blinding was carried out involving 24 individuals over 60 years old who demonstrated physical independence in walking and movement. Participants were distributed randomly into three groups: Inspiratory muscle fatigue, activation and control. Measurements of heart rate variability, diaphragmatic ultrasound, and maximum inspiratory pressure were taken at two stages: prior to the intervention (T1) and directly after treatment (T2).

Results: The inspiratory muscle fatigue group exhibited decrease scores in respiratory and heart rate variability subsequent to undergoing the diaphragmatic fatigue intervention compared to both the activation and control groups (p < 0.05). Conversely, the activation group demonstrated higher values in heart rate variability and respiratory capacity variables following the inspiratory muscle activation training (p < 0.05).

Conclusions: Fatigue of the inspiratory musculature appears to negatively impact heart rate variability and inspiratory muscle strength in older adults.

Clinical trial registration: https://clinicaltrials.gov/study/NCT06269042, identifier: NCT06269042.

简介研究表明,吸气肌肉疲劳会影响自律神经系统和身体状况。本研究旨在评估吸气肌肉疲劳方案对老年人呼吸肌力量和心率变异性的影响:这项随机对照临床试验采用了双盲法,共有 24 名 60 岁以上的老年人参加,他们在行走和运动方面都表现出了身体上的独立性。参与者被随机分为三组:吸气肌肉疲劳组、激活组和对照组。分别在干预前(T1)和治疗后(T2)两个阶段测量心率变异性、横膈膜超声波和最大吸气压力:结果:与激活组和对照组相比,吸气肌肉疲劳组在接受膈肌疲劳干预后,呼吸和心率变异性得分均有所下降(P < 0.05)。相反,激活组在接受吸气肌激活训练后,心率变异性和呼吸能力变量的数值更高(P < 0.05):结论:吸气肌疲劳似乎会对老年人的心率变异性和吸气肌力量产生负面影响。临床试验注册:https://clinicaltrials.gov/study/NCT06269042,标识符:NCT06269042:NCT06269042。
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引用次数: 0
Real-time multicompartment Hodgkin-Huxley neuron emulation on SoC FPGA. SoC FPGA 上的实时多室霍奇金-赫胥黎神经元仿真。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1457774
Romain Beaubois, Jérémy Cheslet, Yoshiho Ikeuchi, Pascal Branchereau, Timothee Levi

Advanced computational models and simulations to unravel the complexities of brain function have known a growing interest in recent years in the field of neurosciences, driven by significant technological progress in computing platforms. Multicompartment models, which capture the detailed morphological and functional properties of neural circuits, represent a significant advancement in this area providing more biological coherence than single compartment modeling. These models serve as a cornerstone for exploring the neural basis of sensory processing, learning paradigms, adaptive behaviors, and neurological disorders. Yet, the high complexity of these models presents a challenge for their real-time implementation, which is essential for exploring alternative therapies for neurological disorders such as electroceutics that rely on biohybrid interaction. Here, we present an accessible, user-friendly, and real-time emulator for multicompartment Hodgkin-Huxley neurons on SoC FPGA. Our system enables real-time emulation of multicompartment neurons while emphasizing cost-efficiency, flexibility, and ease of use. We showcase an implementation utilizing a technology that remains underrepresented in the current literature for this specific application. We anticipate that our system will contribute to the enhancement of computation platforms by presenting an alternative architecture for multicompartment computation. Additionally, it constitutes a step toward developing neuromorphic-based neuroprostheses for bioelectrical therapeutics through an embedded real-time platform running at a similar timescale to biological networks.

近年来,在计算平台技术显著进步的推动下,神经科学领域对揭示大脑功能复杂性的先进计算模型和模拟越来越感兴趣。多室模型能捕捉神经回路的详细形态和功能特性,是该领域的一大进步,与单室模型相比,它能提供更多的生物连贯性。这些模型是探索感觉处理、学习范式、适应行为和神经系统疾病的神经基础的基石。然而,这些模型的高复杂性为其实时实施带来了挑战,而实时实施对于探索神经系统疾病的替代疗法(如依赖于生物混合相互作用的电疗法)至关重要。在这里,我们在 SoC FPGA 上为多室霍奇金-赫胥黎神经元提供了一个易于访问、用户友好的实时仿真器。我们的系统可实现多室神经元的实时仿真,同时强调成本效益、灵活性和易用性。我们展示了利用一种在当前文献中仍未得到充分反映的技术实现这一特定应用的情况。我们预计,我们的系统将为多区室计算提供另一种架构,从而为增强计算平台做出贡献。此外,它还通过一个嵌入式实时平台,以类似于生物网络的时间尺度运行,为开发基于神经形态的神经义肢,用于生物电治疗迈出了一步。
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引用次数: 0
A three-classification model for identifying migraine with right-to-left shunt using lateralization of functional connectivity and brain network topology: a resting-state fMRI study. 利用功能连通性和大脑网络拓扑的侧向化识别偏头痛右向左分流的三分类模型:静息态 fMRI 研究。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-12 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1488193
Weifang Nie, Weiming Zeng, Jiajun Yang, Lei Wang, Yuhu Shi

Introduction: Right-to-left shunting has been significantly associated with migraine, although the neural mechanisms remain complex and not fully elucidated. The aim of this study was to investigate the variability of brain asymmetry in individuals with migraine with right-to-left shunting, migraine without right-to-left shunting and normal controls using resting-state fMRI technology and to construct a three-classification model.

Methods: Firstly, asymmetries in functional connectivity and brain network topology were quantified to laterality indices. Secondly, the laterality indices were employed to construct a three-classification model using decision tree and random forest algorithms. Ultimately, through a feature score analysis, the key brain regions that contributed significantly to the classification were extracted, and the associations between these brain regions and clinical features were investigated.

Results: Our experimental results showed that the initial classification accuracy reached 0.8961. Subsequently, validation using an independent sample set resulted in a classification accuracy of 0.8874. Further, after expanding the samples by the segmentation strategy, the classification accuracies were improved to 0.9103 and 0.9099. Additionally, the third sample set yielded a classification accuracy of 0.8745. Finally, 9 pivotal brain regions were identified and distributed in the default network, the control network, the visual network, the limbic network, the somatomotor network and the salience/ventral attention network.

Discussion: The results revealed distinct lateralization features in the brains of the three groups, which were closely linked to migraine and right-to-left shunting symptoms and could serve as potential imaging biomarkers for clinical diagnosis. Our findings enhanced our understanding of migraine and right-to-left shunting mechanisms and offered insights into assisting clinical diagnosis.

导言:右向左分流与偏头痛密切相关,但其神经机制仍然复杂,尚未完全阐明。本研究的目的是利用静息态 fMRI 技术研究伴有右向左分流的偏头痛患者、不伴有右向左分流的偏头痛患者和正常对照组患者大脑不对称的变异性,并构建一个三分类模型:方法:首先,将功能连接和大脑网络拓扑的不对称性量化为侧向性指数。方法:首先,将功能连接性和脑网络拓扑的不对称性量化为侧向性指数;其次,利用侧向性指数,采用决策树和随机森林算法构建三分类模型。最后,通过特征得分分析,提取出对分类有显著贡献的关键脑区,并研究了这些脑区与临床特征之间的关联:实验结果表明,最初的分类准确率达到了 0.8961。随后,使用独立样本集进行验证,分类准确率达到 0.8874。此外,通过分割策略扩大样本后,分类准确率提高到了 0.9103 和 0.9099。此外,第三个样本集的分类准确率为 0.8745。最后,确定了 9 个关键脑区,它们分布在默认网络、控制网络、视觉网络、边缘网络、躯体运动网络和显著性/内侧注意网络中:讨论:研究结果表明,三组偏头痛患者大脑侧化特征明显,这与偏头痛和右向左分流症状密切相关,可作为临床诊断的潜在影像生物标志物。我们的研究结果加深了我们对偏头痛和右向左分流机制的理解,并为辅助临床诊断提供了启示。
{"title":"A three-classification model for identifying migraine with right-to-left shunt using lateralization of functional connectivity and brain network topology: a resting-state fMRI study.","authors":"Weifang Nie, Weiming Zeng, Jiajun Yang, Lei Wang, Yuhu Shi","doi":"10.3389/fnins.2024.1488193","DOIUrl":"https://doi.org/10.3389/fnins.2024.1488193","url":null,"abstract":"<p><strong>Introduction: </strong>Right-to-left shunting has been significantly associated with migraine, although the neural mechanisms remain complex and not fully elucidated. The aim of this study was to investigate the variability of brain asymmetry in individuals with migraine with right-to-left shunting, migraine without right-to-left shunting and normal controls using resting-state fMRI technology and to construct a three-classification model.</p><p><strong>Methods: </strong>Firstly, asymmetries in functional connectivity and brain network topology were quantified to laterality indices. Secondly, the laterality indices were employed to construct a three-classification model using decision tree and random forest algorithms. Ultimately, through a feature score analysis, the key brain regions that contributed significantly to the classification were extracted, and the associations between these brain regions and clinical features were investigated.</p><p><strong>Results: </strong>Our experimental results showed that the initial classification accuracy reached 0.8961. Subsequently, validation using an independent sample set resulted in a classification accuracy of 0.8874. Further, after expanding the samples by the segmentation strategy, the classification accuracies were improved to 0.9103 and 0.9099. Additionally, the third sample set yielded a classification accuracy of 0.8745. Finally, 9 pivotal brain regions were identified and distributed in the default network, the control network, the visual network, the limbic network, the somatomotor network and the salience/ventral attention network.</p><p><strong>Discussion: </strong>The results revealed distinct lateralization features in the brains of the three groups, which were closely linked to migraine and right-to-left shunting symptoms and could serve as potential imaging biomarkers for clinical diagnosis. Our findings enhanced our understanding of migraine and right-to-left shunting mechanisms and offered insights into assisting clinical diagnosis.</p>","PeriodicalId":12639,"journal":{"name":"Frontiers in Neuroscience","volume":"18 ","pages":"1488193"},"PeriodicalIF":3.2,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11588730/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142727729","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Diethyl butylmalonate attenuates cognitive deficits and depression in 5×FAD mice. 丁基丙二酸二乙酯可减轻 5×FAD 小鼠的认知缺陷和抑郁。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-11 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1480000
Lai Yuan, Ge Song, Wangwei Xu, Shuni Liu, Yongsheng Zhang, Wei Pan, Xiaohui Ding, Linlin Fu, Qisi Lin, Fenfen Sun

Background: Alzheimer's disease (AD), characterized by cognitive impairment and depression, is currently one of the intractable problems due to the insufficiency of intervention strategies. Diethyl butylmalonate (DBM) has recently attracted extensive interest due to its anti-inflammatory role in macrophages. However, it is still unknown whether DBM has a beneficial effect on cognitive deficits and depression.

Methods: DBM was administrated to 5×FAD and C57BL/6J mice by intraperitoneal injection. Novel object recognition, Y-maze spatial memory, Morris water maze and nest building tests were used to evaluate cognitive function. Moreover, the tail suspension test, forced swimming test, open field test and the elevated plus maze test were used to assess depression. Transmission electron microscopy, Golgi-Cox staining, immunofluorescence, RT-qPCR and western blot were utilized to determine the neuropathological changes in the hippocampus and amygdala of mice.

Results: Multiple behavioral tests showed that DBM effectively mitigated cognitive deficit and depression in 5×FAD mice. Moreover, DBM significantly attenuated synaptic ultrastructure and neurite impairment in the hippocampus of 5×FAD mice, paralleled by the improvement of the deficits of PSD95 and BDNF proteins. In addition, DBM decreased the accumulation of microglia and downregulated neuroinflammation in the hippocampus and amygdala of 5×FAD mice.

Conclusion: This study provides evidence that DBM ameliorates cognitive deficits and depression via improvement of the impairment of synaptic ultrastructure and neuroinflammation, suggesting that DBM is a potential drug candidate for treating AD-related neurodegeneration.

背景:阿尔茨海默病(AD)以认知障碍和抑郁为特征,由于干预策略不足,目前已成为难以解决的问题之一。丁基丙二酸二乙酯(DBM)因其在巨噬细胞中的抗炎作用最近引起了广泛关注。然而,DBM是否对认知障碍和抑郁症有益处仍是未知数:方法:给 5×FAD 和 C57BL/6J 小鼠腹腔注射 DBM。方法:给5×FAD和C57BL/6J小鼠腹腔注射DBM,采用新物体识别、Y迷宫空间记忆、莫里斯水迷宫和筑巢试验评估小鼠的认知功能。此外,还使用尾悬吊试验、强迫游泳试验、空地试验和高架加迷宫试验来评估抑郁。透射电子显微镜、Golgi-Cox 染色、免疫荧光、RT-qPCR 和 Western 印迹被用来确定小鼠海马和杏仁核的神经病理学变化:结果:多种行为测试表明,DBM能有效缓解5×FAD小鼠的认知缺陷和抑郁。此外,DBM能明显减轻5×FAD小鼠海马的突触超微结构和神经元损伤,同时改善PSD95和BDNF蛋白的缺陷。此外,DBM还减少了小胶质细胞的聚集,并下调了5×FAD小鼠海马和杏仁核的神经炎症:本研究提供了证据,证明 DBM 可通过改善突触超微结构和神经炎症的损伤来改善认知障碍和抑郁症,这表明 DBM 是治疗 AD 相关神经变性的潜在候选药物。
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引用次数: 0
Asymmetric Large Kernel Distillation Network for efficient single image super-resolution. 非对称大核蒸馏网络,实现高效的单幅图像超分辨率
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-11 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1502499
Daokuan Qu, Yuyao Ke

Recently, significant advancements have been made in the field of efficient single-image super-resolution, primarily driven by the innovative concept of information distillation. This method adeptly leverages multi-level features to facilitate high-resolution image reconstruction, allowing for enhanced detail and clarity. However, many existing approaches predominantly emphasize the enhancement of distilled features, often overlooking the critical aspect of improving the feature extraction capabilities of the distillation module itself. In this paper, we address this limitation by introducing an asymmetric large-kernel convolution design. By increasing the size of the convolution kernel, we expand the receptive field, which enables the model to more effectively capture long-range dependencies among image pixels. This enhancement significantly improves the model's perceptual ability, leading to more accurate reconstructions. To maintain a manageable level of model complexity, we adopt a lightweight architecture that employs asymmetric convolution techniques. Building on this foundation, we propose the Lightweight Asymmetric Large Kernel Distillation Network (ALKDNet). Comprehensive experiments conducted on five widely recognized benchmark datasets-Set5, Set14, BSD100, Urban100, and Manga109-indicate that ALKDNet not only preserves efficiency but also demonstrates performance enhancements relative to existing super-resolution methods. The average PSNR and SSIM values show improvements of 0.10 dB and 0.0013, respectively, thereby achieving state-of-the art performance.

最近,在高效单图像超分辨率领域取得了重大进展,这主要是由创新的信息提炼概念推动的。这种方法善于利用多层次特征来促进高分辨率图像重建,从而增强细节和清晰度。然而,现有的许多方法主要强调增强蒸馏特征,往往忽视了提高蒸馏模块本身特征提取能力这一关键环节。在本文中,我们通过引入非对称大核卷积设计来解决这一局限性。通过增加卷积核的大小,我们扩大了感受野,从而使模型能够更有效地捕捉图像像素之间的长距离依赖关系。这一改进大大提高了模型的感知能力,从而实现了更精确的重建。为了保持模型复杂度在可控范围内,我们采用了非对称卷积技术的轻量级架构。在此基础上,我们提出了轻量级非对称大核蒸馏网络(ALKDNet)。在五个广受认可的基准数据集(Set5、Set14、BSD100、Urban100 和 Manga109)上进行的综合实验表明,与现有的超分辨率方法相比,ALKDNet 不仅能保持效率,还能提高性能。平均 PSNR 和 SSIM 值分别提高了 0.10 dB 和 0.0013,从而实现了最先进的性能。
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引用次数: 0
MicroRNAs regulating autophagy: opportunities in treating neurodegenerative diseases. 调节自噬的微RNA:治疗神经退行性疾病的机遇。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-08 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1397106
Mahdi Mohseni, Ghazal Behzad, Arezoo Farhadi, Javad Behroozi, Hamraz Mohseni, Behnaz Valipour

Neurodegenerative diseases (NDs) are increasingly prevalent in our aging population, imposing significant social and economic burdens. Currently, most ND patients receive only symptomatic treatment due to limited understanding of their underlying causes. Consequently, there is a pressing need for comprehensive research into the pathological mechanisms of NDs by both researchers and clinicians. Autophagy, a cellular mechanism responsible for maintaining cellular equilibrium by removing dysfunctional organelles and misfolded proteins, plays a vital role in cell health and is implicated in various diseases. MicroRNAs (miRNAs) exert influence on autophagy and hold promise for treating these diseases. These small oligonucleotides bind to the 3'-untranslated region (UTR) of target mRNAs, leading to mRNA silencing, degradation, or translation blockade. This review explores recent findings on the regulation of autophagy and autophagy-related genes by different miRNAs in various pathological conditions, including neurodegeneration and inflammation-related diseases. The recognition of miRNAs as key regulators of autophagy in human diseases has spurred investigations into pharmacological compounds and traditional medicines targeting these miRNAs in disease models. This has catalyzed a new wave of therapeutic interventions aimed at modulating autophagy.

神经退行性疾病(NDs)在我国老龄人口中越来越普遍,给社会和经济造成了巨大负担。目前,由于对其根本原因了解有限,大多数 ND 患者只能接受对症治疗。因此,研究人员和临床医生迫切需要对 NDs 的病理机制进行全面研究。自噬是一种细胞机制,通过清除功能失调的细胞器和错误折叠的蛋白质来维持细胞平衡。微小核糖核酸(miRNA)对自噬产生影响,有望治疗这些疾病。这些小寡核苷酸与目标 mRNA 的 3'- 非翻译区 (UTR) 结合,导致 mRNA 沉默、降解或翻译受阻。这篇综述探讨了在神经变性和炎症相关疾病等各种病理情况下不同 miRNA 对自噬和自噬相关基因调控的最新发现。人们认识到 miRNA 是人类疾病中自噬的关键调控因子,从而推动了针对这些 miRNA 在疾病模型中的药理化合物和传统药物的研究。这催生了新一轮旨在调节自噬的治疗干预。
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引用次数: 0
Multi-gate Weighted Fusion Network for neuronal morphology classification. 用于神经元形态分类的多门加权融合网络
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-08 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1322623
Chunli Sun, Feng Zhao

Analyzing the types of neurons based on morphological characteristics is pivotal for understanding brain function and human development. Existing analysis approaches based on 2D view images fully use complementary information across images. However, these methods ignore the redundant information caused by similar images and the effects of different views on the analysis results during the fusion process. Considering these factors, this paper proposes a Multi-gate Weighted Fusion Network (MWFNet) to characterize neuronal morphology in a hierarchical manner. MWFNet mainly consists of a Gated View Enhancement Module (GVEM) and a Gated View Measurement Module (GVMM). GVEM enhances view-level descriptors and eliminates redundant information by mining the relationships among different views. GVMM calculates the weights of view images based on the salient activated regions to assess their influence on the analysis results. Furthermore, the enhanced view-level features are fused differentially according to the view weight to generate a more discriminative instance-level descriptor. In this way, the proposed MWFNet not only eliminates unnecessary features but also maps the representation differences of views into decision-making. This can improve the accuracy and robustness of MWFNet for the identification of neuron type. Experimental results show that our method achieves accuracies of 91.73 and 98.18% on classifying 10 types and five types of neurons, respectively, outperforming other state-of-the-art methods.

根据形态特征来分析神经元类型对于了解大脑功能和人类发育至关重要。现有的基于二维视图图像的分析方法充分利用了图像间的互补信息。然而,这些方法在融合过程中忽略了相似图像造成的冗余信息以及不同视图对分析结果的影响。考虑到这些因素,本文提出了一种多门加权融合网络(MWFNet),以分层的方式表征神经元形态。MWFNet 主要由门控视图增强模块(GVEM)和门控视图测量模块(GVMM)组成。GVEM 通过挖掘不同视图之间的关系来增强视图级描述符并消除冗余信息。GVMM 根据突出的激活区域计算视图图像的权重,以评估它们对分析结果的影响。此外,根据视图权重对增强的视图级特征进行差异化融合,以生成更具区分性的实例级描述符。这样,所提出的 MWFNet 不仅消除了不必要的特征,还将视图的表征差异映射到决策中。这可以提高 MWFNet 识别神经元类型的准确性和鲁棒性。实验结果表明,我们的方法对 10 种类型和 5 种类型神经元的分类准确率分别达到 91.73% 和 98.18%,优于其他最先进的方法。
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引用次数: 0
Functional brain controllability in Parkinson's disease and its association with motor outcomes after deep brain stimulation. 帕金森病的大脑功能可控性及其与脑深部刺激术后运动效果的关系。
IF 3.2 3区 医学 Q2 NEUROSCIENCES Pub Date : 2024-11-07 eCollection Date: 2024-01-01 DOI: 10.3389/fnins.2024.1433577
Ziyu Li, Zhiqin Liu, Yuan Gao, Biqiu Tang, Shi Gu, Chunyan Luo, Su Lui

Introduction: Considering the high economic burden and risks of deep brain stimulation (DBS) surgical failure, predicting the motor outcomes of DBS in Parkinson's disease (PD) is of significant importance in clinical decision-making. Functional controllability provides a rationale for combining the abnormal connections of the cortico-striato-thalamic-cortical (CSTC) motor loops and dynamic changes after medication in DBS outcome prediction.

Methods: In this study, we analyzed the association between preoperative delta functional controllability after medication within CSTC loops and motor outcomes of subthalamic nucleus DBS (STN-DBS) and globus pallidus interna DBS (GPi-DBS) and predicted motor outcomes in a Support Vector Regression (SVR) model using the delta controllability of focal regions.

Results: While the STN-DBS motor outcomes were associated with the delta functional controllability of the thalamus, the GPi-DBS motor outcomes were related to the delta functional controllability of the caudate nucleus and postcentral gyrus. In the SVR model, the predicted and actual motor outcomes were positively correlated, with p = 0.020 and R = 0.514 in the STN-DBS group, and p = 0.011 and R = 0.705 in the GPi- DBS group.

Discussion: Our findings indicate that different focal regions within the CSTC motor loops are involved in STN-DBS and GPi-DBS and support the feasibility of functional controllability in predicting DBS motor outcomes for PD in clinical decision-making.

导言:考虑到高昂的经济负担和脑深部刺激(DBS)手术失败的风险,预测帕金森病(PD)DBS的运动预后对临床决策具有重要意义。功能可控性为结合皮质-纹状体-丘脑-皮质(CSTC)运动环路的异常连接和用药后的动态变化来预测 DBS 结果提供了理论依据:在这项研究中,我们分析了眼下核DBS(STN-DBS)和丘脑间DBS(GPi-DBS)术前用药后CSTC环路内的δ功能可控性与运动结果之间的关联,并利用病灶区域的δ可控性在支持向量回归(SVR)模型中预测了运动结果:结果:STN-DBS的运动结果与丘脑的δ功能可控性有关,而GPi-DBS的运动结果与尾状核和中央后回的δ功能可控性有关。在SVR模型中,预测的运动结果和实际的运动结果呈正相关,STN-DBS组的P = 0.020和R = 0.514,GPi-DBS组的P = 0.011和R = 0.705:我们的研究结果表明,STN-DBS和GPi-DBS涉及CSTC运动环路中的不同病灶区域,并支持在临床决策中用功能可控性预测DBS治疗帕金森病的运动结果的可行性。
{"title":"Functional brain controllability in Parkinson's disease and its association with motor outcomes after deep brain stimulation.","authors":"Ziyu Li, Zhiqin Liu, Yuan Gao, Biqiu Tang, Shi Gu, Chunyan Luo, Su Lui","doi":"10.3389/fnins.2024.1433577","DOIUrl":"10.3389/fnins.2024.1433577","url":null,"abstract":"<p><strong>Introduction: </strong>Considering the high economic burden and risks of deep brain stimulation (DBS) surgical failure, predicting the motor outcomes of DBS in Parkinson's disease (PD) is of significant importance in clinical decision-making. Functional controllability provides a rationale for combining the abnormal connections of the cortico-striato-thalamic-cortical (CSTC) motor loops and dynamic changes after medication in DBS outcome prediction.</p><p><strong>Methods: </strong>In this study, we analyzed the association between preoperative delta functional controllability after medication within CSTC loops and motor outcomes of subthalamic nucleus DBS (STN-DBS) and globus pallidus interna DBS (GPi-DBS) and predicted motor outcomes in a Support Vector Regression (SVR) model using the delta controllability of focal regions.</p><p><strong>Results: </strong>While the STN-DBS motor outcomes were associated with the delta functional controllability of the thalamus, the GPi-DBS motor outcomes were related to the delta functional controllability of the caudate nucleus and postcentral gyrus. In the SVR model, the predicted and actual motor outcomes were positively correlated, with <i>p</i> = 0.020 and <i>R</i> = 0.514 in the STN-DBS group, and <i>p</i> = 0.011 and <i>R</i> = 0.705 in the GPi- DBS group.</p><p><strong>Discussion: </strong>Our findings indicate that different focal regions within the CSTC motor loops are involved in STN-DBS and GPi-DBS and support the feasibility of functional controllability in predicting DBS motor outcomes for PD in clinical decision-making.</p>","PeriodicalId":12639,"journal":{"name":"Frontiers in Neuroscience","volume":"18 ","pages":"1433577"},"PeriodicalIF":3.2,"publicationDate":"2024-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11578951/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142686771","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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Frontiers in Neuroscience
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