Dissolved manganese (dMn) is an essential bioactive element required for marine organisms. Redox condition determines its solubility and its solid phase removal from seawater. It displays a typical scavenging type profile in the Indian Ocean with an elevated concentration in the Oxygen Minimum Zone (OMZ) of the Bay of Bengal (BoB). The surface dMn decreases southward in the BoB, and its concentration gradient correlates well with salinity because of the enormous riverine influx. Reductive dissolution of Iron-manganese (Fe-Mn) oxyhydroxides-rich sediments brought by the Ganga-Brahmaputra rivers enriches dMn in the bottom waters of the shelf regions (∼25 nM), which gets advected to the open ocean through cross-shelf transport. The atmospheric input is the prominent source of dMn in the BoB. Transport of the Indonesian Through Flow waters supplies high dMn in the surface waters of the Central Indian Ocean Basin. Internal cycling seems to control the dMn distribution in the water column in addition to its external sources. Water column denitrification increases dMn in the OMZ waters of the BoB through the reductive dissolution of sinking Mn oxide particles under the prevailing suboxic conditions. The presence of two sub-surface peaks of dMn associated with nitrite maxima suggests active denitrification in the OMZ waters of the BoB, similar to the Arabian Sea. The interaction of circulating fluid with subducting Fe-Mn-rich crusts enriches the deep water dMn in the Java Sumatra region. Further, the hydrothermal activity over the Southeast and Central Indian Ridges contributes significantly to the dMn budget of the deeper waters.
{"title":"Atmospheric Deposition, Shelf Sediment Supply, Riverine Input, and Redox Conditions Control Dissolved Manganese in the Indian Ocean","authors":"Nirmalya Malla, Sunil Kumar Singh","doi":"10.1029/2025GB008660","DOIUrl":"https://doi.org/10.1029/2025GB008660","url":null,"abstract":"<p>Dissolved manganese (dMn) is an essential bioactive element required for marine organisms. Redox condition determines its solubility and its solid phase removal from seawater. It displays a typical scavenging type profile in the Indian Ocean with an elevated concentration in the Oxygen Minimum Zone (OMZ) of the Bay of Bengal (BoB). The surface dMn decreases southward in the BoB, and its concentration gradient correlates well with salinity because of the enormous riverine influx. Reductive dissolution of Iron-manganese (Fe-Mn) oxyhydroxides-rich sediments brought by the Ganga-Brahmaputra rivers enriches dMn in the bottom waters of the shelf regions (∼25 nM), which gets advected to the open ocean through cross-shelf transport. The atmospheric input is the prominent source of dMn in the BoB. Transport of the Indonesian Through Flow waters supplies high dMn in the surface waters of the Central Indian Ocean Basin. Internal cycling seems to control the dMn distribution in the water column in addition to its external sources. Water column denitrification increases dMn in the OMZ waters of the BoB through the reductive dissolution of sinking Mn oxide particles under the prevailing suboxic conditions. The presence of two sub-surface peaks of dMn associated with nitrite maxima suggests active denitrification in the OMZ waters of the BoB, similar to the Arabian Sea. The interaction of circulating fluid with subducting Fe-Mn-rich crusts enriches the deep water dMn in the Java Sumatra region. Further, the hydrothermal activity over the Southeast and Central Indian Ridges contributes significantly to the dMn budget of the deeper waters.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 10","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-10-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145271825","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Marine oxygen deficient zones (ODZs) play a major role in the Earth's biogeochemical cycles and are responsible for nitrogen and sulfur removal from the oceans. Microbial-reducing reaction processes generate nitrite (NO2−) and sulfur compounds as intermediaries that may accumulate in these zones. Current assessments on microbial transformations inside ODZs are based on shipboard measurements, and there are no well-resolved seasonal to annual observations or high-resolution vertical sampling that would characterize variability. Here, we propose an alternative statistical approach to analyze the raw output of the nitrate sensor from BGC-Argo floats with the ability to detect NO2− and thiosulfate (S2O32−) concentrations in addition to nitrate. The new approach provides data with great vertical and spatiotemporal resolution. The method can be applied to UV-spectrometer output data from SUNAs and ISUS nitrate sensors commonly deployed on various observing platforms. We validated the technique in the field by matching shipboard NO2− bottle data with float data from the Eastern Tropical North Pacific (ETNP) and Eastern Tropical South Pacific (ETSP) ODZs. We then show a complete time series of three floats as study cases. The ability to detect NO2− and S2O32− concomitantly with other key chemical variables (i.e., oxygen, pH, and bio-optics) at such fine scale allows for novel insights into the nitrogen and sulfur cycling of ODZs and processes driving these cycles. This new approach will enable fine-scale remote quantification of NO2− and S2O32− to support a better understanding of the biogeochemical transformations happening inside these already-expanding deoxygenated regions.
{"title":"BGC-Argo Floats Reveal Nitrite and Thiosulfate Dynamics in the Oceans With High Spatiotemporal Resolution","authors":"Mariana B. Bif, Kenneth S. Johnson","doi":"10.1029/2024GB008473","DOIUrl":"https://doi.org/10.1029/2024GB008473","url":null,"abstract":"<p>Marine oxygen deficient zones (ODZs) play a major role in the Earth's biogeochemical cycles and are responsible for nitrogen and sulfur removal from the oceans. Microbial-reducing reaction processes generate nitrite (NO<sub>2</sub><sup>−</sup>) and sulfur compounds as intermediaries that may accumulate in these zones. Current assessments on microbial transformations inside ODZs are based on shipboard measurements, and there are no well-resolved seasonal to annual observations or high-resolution vertical sampling that would characterize variability. Here, we propose an alternative statistical approach to analyze the raw output of the nitrate sensor from BGC-Argo floats with the ability to detect NO<sub>2</sub><sup>−</sup> and thiosulfate (S<sub>2</sub>O<sub>3</sub><sup>2−</sup>) concentrations in addition to nitrate. The new approach provides data with great vertical and spatiotemporal resolution. The method can be applied to UV-spectrometer output data from SUNAs and ISUS nitrate sensors commonly deployed on various observing platforms. We validated the technique in the field by matching shipboard NO<sub>2</sub><sup>−</sup> bottle data with float data from the Eastern Tropical North Pacific (ETNP) and Eastern Tropical South Pacific (ETSP) ODZs. We then show a complete time series of three floats as study cases. The ability to detect NO<sub>2</sub><sup>−</sup> and S<sub>2</sub>O<sub>3</sub><sup>2−</sup> concomitantly with other key chemical variables (i.e., oxygen, pH, and bio-optics) at such fine scale allows for novel insights into the nitrogen and sulfur cycling of ODZs and processes driving these cycles. This new approach will enable fine-scale remote quantification of NO<sub>2</sub><sup>−</sup> and S<sub>2</sub>O<sub>3</sub><sup>2−</sup> to support a better understanding of the biogeochemical transformations happening inside these already-expanding deoxygenated regions.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 10","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-10-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://agupubs.onlinelibrary.wiley.com/doi/epdf/10.1029/2024GB008473","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145224125","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Yinghuan Xie, Paul Spence, Stuart Corney, Michael D. Tyka, Lennart T. Bach
Marine Carbon Dioxide Removal (mCDR) will likely play a role in efforts to keep global warming below 2°C. mCDR methods create a deficit in dissolved seawater CO2 relative to the unperturbed counterfactual. This seawater CO2 deficit induces either an uptake of atmospheric CO2 or reduced CO2 outgassing into the atmosphere. The immediate climatic benefit of mCDR depends on air-sea CO2 equilibration before the CO2 depleted seawater deficit in the surface ocean loses contact with the atmosphere through water mass ventilation. Air-sea CO2 equilibration occurs over vast ocean regions, which are too large to constrain equilibration with current observational methods. As such, numerical modeling is needed to evaluate the spatial and temporal scales of air-sea CO2 equilibration. This study employs the ACCESS-OM2 model at three resolutions (0.1°, 0.25°, and 1°) to evaluate the dependency of simulated equilibration timescales on model resolution. Results indicate that model resolution has limited influence on equilibration timescales in the tropics but exerts a more significant effect in polar regions. The main reason for the simulated differences is that different resolutions advect CO2-deficient seawater into different locations (horizontally and vertically) where air-sea exchange can occur at different rates. The comparison of our results with simulations made with other ocean models further suggests that differences due to model resolution are smaller than differences between different models of similar resolutions. Our results are one step forward in evaluating the robustness of model-based assessments of air-sea CO2 equilibration timescales.
{"title":"Effect of Model Resolution on Air-Sea CO2 Equilibration Timescales","authors":"Yinghuan Xie, Paul Spence, Stuart Corney, Michael D. Tyka, Lennart T. Bach","doi":"10.1029/2024GB008482","DOIUrl":"https://doi.org/10.1029/2024GB008482","url":null,"abstract":"<p>Marine Carbon Dioxide Removal (mCDR) will likely play a role in efforts to keep global warming below 2°C. mCDR methods create a deficit in dissolved seawater CO<sub>2</sub> relative to the unperturbed counterfactual. This seawater CO<sub>2</sub> deficit induces either an uptake of atmospheric CO<sub>2</sub> or reduced CO<sub>2</sub> outgassing into the atmosphere. The immediate climatic benefit of mCDR depends on air-sea CO<sub>2</sub> equilibration before the CO<sub>2</sub> depleted seawater deficit in the surface ocean loses contact with the atmosphere through water mass ventilation. Air-sea CO<sub>2</sub> equilibration occurs over vast ocean regions, which are too large to constrain equilibration with current observational methods. As such, numerical modeling is needed to evaluate the spatial and temporal scales of air-sea CO<sub>2</sub> equilibration. This study employs the ACCESS-OM2 model at three resolutions (0.1°, 0.25°, and 1°) to evaluate the dependency of simulated equilibration timescales on model resolution. Results indicate that model resolution has limited influence on equilibration timescales in the tropics but exerts a more significant effect in polar regions. The main reason for the simulated differences is that different resolutions advect CO<sub>2</sub>-deficient seawater into different locations (horizontally and vertically) where air-sea exchange can occur at different rates. The comparison of our results with simulations made with other ocean models further suggests that differences due to model resolution are smaller than differences between different models of similar resolutions. Our results are one step forward in evaluating the robustness of model-based assessments of air-sea CO<sub>2</sub> equilibration timescales.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 10","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://agupubs.onlinelibrary.wiley.com/doi/epdf/10.1029/2024GB008482","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145224519","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Surface phytoplankton biomass (measured in mol C m−3) represents a critical parameter within the Earth System that is measured from space and simulated in Earth System Models. Under climate change, the current generation of Earth System Models agrees that low-latitude biomass will decline and high-latitude biomass will increase. However, on a regional scale, the magnitude, phenology and spatial pattern of these changes are highly inconsistent across models. We use machine learning to investigate the sources of the divergence and evaluate the realism of the simulations. We train Random Forests driven by environmental drivers to simulate surface phytoplankton biomass under both pre-industrial control and SSP5-8.5 scenarios. Outside the Arctic, the bulk of the changes in biomass are driven by rearrangements in the spatiotemporal distribution of environmental predictors. Large regional changes in models, however, are associated either with unrealistically low pre-industrial levels of macronutrients or unrealistically strong responses to those macronutrients. Within the Arctic, relationships between environmental predictors and biomass change under global warming. While increased light drives increased biomass, the effect is largest in models with a high nutrient bias. Feeding inputs from an ensemble of models to an emulator trained on observations predicts observed biomass better than the ensemble of the models does, highlighting the fact that models do not produce the correct relationships between environmental predictors and biomass. However, this technique does not yield mechanistically consistent predictions of biomass under climate change. Skepticism of large regional changes in surface phytoplankton biomass produced by individual models is warranted.
地表浮游植物生物量(以mol C m−3为单位)是地球系统内的一个关键参数,可以从空间测量并在地球系统模型中进行模拟。在气候变化下,当前一代地球系统模型一致认为低纬度生物量将下降,高纬度生物量将增加。然而,在区域尺度上,这些变化的幅度、物候和空间格局在不同模式之间高度不一致。我们使用机器学习来研究分歧的来源并评估模拟的真实性。我们训练由环境驱动因素驱动的随机森林来模拟工业化前控制和SSP5-8.5情景下的表层浮游植物生物量。在北极以外,生物量的大部分变化是由环境预测因子时空分布的重新排列驱动的。然而,模式中的大区域变化要么与工业化前大量营养素水平低得不现实有关,要么与对这些大量营养素的反应强得不现实有关。在北极,全球变暖下环境预测因子与生物量变化之间的关系。虽然增加的光照驱动增加的生物量,但在高营养偏倚的模型中效果最大。将来自模型集合的输入输入到经过观测训练的仿真器中,可以比模型集合更好地预测观测到的生物量,这突出了一个事实,即模型不能产生环境预测因子与生物量之间的正确关系。然而,这种技术不能产生气候变化下生物质的力学一致的预测。对单个模式产生的地表浮游植物生物量的大区域变化的怀疑是有根据的。
{"title":"Machine Learning Methods Suggest That Large Regional Changes in Phytoplankton Biomass Produced by Earth System Models Do Not Reflect Realistic Responses to Changing Climate","authors":"Anand Gnanadesikan, Jingwen Liu, Sandupal Dutta, Brandon Feole, Faith McCarthy, John Qian","doi":"10.1029/2025GB008761","DOIUrl":"https://doi.org/10.1029/2025GB008761","url":null,"abstract":"<p>Surface phytoplankton biomass (measured in mol C m<sup>−3</sup>) represents a critical parameter within the Earth System that is measured from space and simulated in Earth System Models. Under climate change, the current generation of Earth System Models agrees that low-latitude biomass will decline and high-latitude biomass will increase. However, on a regional scale, the magnitude, phenology and spatial pattern of these changes are highly inconsistent across models. We use machine learning to investigate the sources of the divergence and evaluate the realism of the simulations. We train Random Forests driven by environmental drivers to simulate surface phytoplankton biomass under both pre-industrial control and SSP5-8.5 scenarios. Outside the Arctic, the bulk of the changes in biomass are driven by rearrangements in the spatiotemporal distribution of environmental predictors. Large regional changes in models, however, are associated either with unrealistically low pre-industrial levels of macronutrients or unrealistically strong responses to those macronutrients. Within the Arctic, relationships between environmental predictors and biomass change under global warming. While increased light drives increased biomass, the effect is largest in models with a high nutrient bias. Feeding inputs from an ensemble of models to an emulator trained on observations predicts observed biomass better than the ensemble of the models does, highlighting the fact that models do not produce the correct relationships between environmental predictors and biomass. However, this technique does not yield mechanistically consistent predictions of biomass under climate change. Skepticism of large regional changes in surface phytoplankton biomass produced by individual models is warranted.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 10","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145146783","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Masayuki Kondo, Prabir K. Patra, Josep G. Canadell, Philippe Ciais, Richard A. Houghton, Akihiko Ito, Chandra S. Deshmukh, Tomo'omi Kumagai, Xiangzhong Luo, Umakant Mishra, Atul K. Jain, Wei Li, Gerbrand Koren, Stephen Sitch, Ben Poulter, Hanqin Tian, Ana Bastos, Ronny Lauerwald, Judith A. Rosentreter, Naveen Chandra, Tazu Saeki, Marielle Saunois, Ingrid T. Luijkx, Takashi Maki, Takashi Nakamura, Kirari Hirabayashi, Takeshi Hirano, Nobuko Saigusa
Member countries of the Association of Southeast Asian Nations ratified the Paris Agreement and have initiated their own efforts to reduce greenhouse gas (GHG) emissions. However, the progress of these countries toward climate neutrality remains uncertain. Here, we estimated the combined budget for carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) in Southeast Asia for 2000–2019 using bottom-up and top-down approaches. The CO2 emissions from deforestation were the largest source, followed by anthropogenic fire emissions, which together exceeded the CO2 uptake by natural vegetation and land-use change legacy (e.g., regrowth), yielding a net source of CO2 in the biosphere. The region's biosphere was also a net source of CH4 and N2O, which, combined with the CO2 budget, makes the Southeast Asian biosphere a net source of GHGs to the atmosphere, ranging from 2,003.2 ± 406.1 Tg CO2eq yr−1 (bottom-up) to 2,227.5 ± 572.8 Tg CO2eq yr−1 (top-down) for 2000–2019. Among non-biospheric GHG emissions (e.g., fossil fuels and waste-related emissions), coal usage has resulted in an unprecedented increase in CO2 emissions. The total GHG budget (the biospheric GHG budget plus the non-biospheric GHG fluxes) was calculated as a net source of 3,226.3 ± 406.2 Tg CO2eq yr−1 (bottom-up) and 3,406.4 ± 572.9 Tg CO2eq yr−1 (top-down) for 2000–2019. Our study revealed that Southeast Asia is experiencing the dual challenge of large emissions from deforestation and coal usage, necessitating the implementation of urgent mitigation strategies to ensure climate neutrality.
东南亚国家联盟(Association of Southeast Asian Nations)成员国批准了《巴黎协定》,并开始了各自减少温室气体排放的努力。然而,这些国家在实现气候中和方面的进展仍不确定。在这里,我们使用自下而上和自上而下的方法估算了2000-2019年东南亚地区二氧化碳(CO2)、甲烷(CH4)和一氧化二氮(N2O)的综合预算。森林砍伐造成的二氧化碳排放是最大的来源,其次是人为火灾排放,它们加起来超过了自然植被和土地利用变化遗留(例如,再生长)对二氧化碳的吸收,产生了生物圈中二氧化碳的净来源。该地区的生物圈也是CH4和N2O的净来源,结合CO2收支,使东南亚生物圈成为2000-2019年大气温室气体的净来源,范围从2,003.2±406.1 Tg CO2eq yr - 1(自下而上)到2,227.5±572.8 Tg CO2eq yr - 1(自上而下)。在非生物圈温室气体排放(例如,化石燃料和与废物有关的排放)中,煤炭的使用导致二氧化碳排放量空前增加。2000-2019年,总温室气体收支(生物圈温室气体收支加上非生物圈温室气体通量)的净来源为3,226.3±406.2 Tg CO2eq yr - 1(自下而上)和3,406.4±572.9 Tg CO2eq yr - 1(自上而下)。我们的研究表明,东南亚正面临着森林砍伐和煤炭使用造成的大量排放的双重挑战,有必要实施紧急缓解战略,以确保气候中立。
{"title":"The Greenhouse Gas Budget of Southeast Asia for 2000–2019 and Pathways Toward Climate Neutrality","authors":"Masayuki Kondo, Prabir K. Patra, Josep G. Canadell, Philippe Ciais, Richard A. Houghton, Akihiko Ito, Chandra S. Deshmukh, Tomo'omi Kumagai, Xiangzhong Luo, Umakant Mishra, Atul K. Jain, Wei Li, Gerbrand Koren, Stephen Sitch, Ben Poulter, Hanqin Tian, Ana Bastos, Ronny Lauerwald, Judith A. Rosentreter, Naveen Chandra, Tazu Saeki, Marielle Saunois, Ingrid T. Luijkx, Takashi Maki, Takashi Nakamura, Kirari Hirabayashi, Takeshi Hirano, Nobuko Saigusa","doi":"10.1029/2024GB008256","DOIUrl":"https://doi.org/10.1029/2024GB008256","url":null,"abstract":"<p>Member countries of the Association of Southeast Asian Nations ratified the Paris Agreement and have initiated their own efforts to reduce greenhouse gas (GHG) emissions. However, the progress of these countries toward climate neutrality remains uncertain. Here, we estimated the combined budget for carbon dioxide (CO<sub>2</sub>), methane (CH<sub>4</sub>), and nitrous oxide (N<sub>2</sub>O) in Southeast Asia for 2000–2019 using bottom-up and top-down approaches. The CO<sub>2</sub> emissions from deforestation were the largest source, followed by anthropogenic fire emissions, which together exceeded the CO<sub>2</sub> uptake by natural vegetation and land-use change legacy (e.g., regrowth), yielding a net source of CO<sub>2</sub> in the biosphere. The region's biosphere was also a net source of CH<sub>4</sub> and N<sub>2</sub>O, which, combined with the CO<sub>2</sub> budget, makes the Southeast Asian biosphere a net source of GHGs to the atmosphere, ranging from 2,003.2 ± 406.1 Tg CO<sub>2</sub>eq yr<sup>−1</sup> (bottom-up) to 2,227.5 ± 572.8 Tg CO<sub>2</sub>eq yr<sup>−1</sup> (top-down) for 2000–2019. Among non-biospheric GHG emissions (e.g., fossil fuels and waste-related emissions), coal usage has resulted in an unprecedented increase in CO<sub>2</sub> emissions. The total GHG budget (the biospheric GHG budget plus the non-biospheric GHG fluxes) was calculated as a net source of 3,226.3 ± 406.2 Tg CO<sub>2</sub>eq yr<sup>−1</sup> (bottom-up) and 3,406.4 ± 572.9 Tg CO<sub>2</sub>eq yr<sup>−1</sup> (top-down) for 2000–2019. Our study revealed that Southeast Asia is experiencing the dual challenge of large emissions from deforestation and coal usage, necessitating the implementation of urgent mitigation strategies to ensure climate neutrality.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 9","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145146387","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Soil organic matter (SOM) reserves in paddies are approximately two times larger than those in upland soils, and therefore, rice paddies have a strong impact on terrestrial carbon (C) sequestration. Functional partitioning of SOM into particulate organic matter (POM) and mineral-associated organic matter (MAOM) facilitates our understanding of C sequestration capacity in paddy soils. We analyzed POM and MAOM contents in 104 samples of topsoil and 81 samples of subsoil collected from paddies, and investigated how climate, nitrogen (N) fertilization, and soil depth regulate POM and MAOM storage. MAOM was the predominant fraction (45.3%–63.7%) of SOM in all paddy soils. As the SOC content increased, POM increased linearly, while the increase rate of MAOM slowed down, indicating a tendency for MAOM to reach saturation. The influence of mineral types on POM and MAOM protection exhibited depth-dependent patterns: clay minerals showed stronger associations in topsoil, whereas amorphous iron oxides displayed increasing importance in subsoil. Climatic factors, particularly mean annual temperature (MAT), had contrasting effects on POM and MAOM storage: increasing MAT reduced MAOM content and stability while having a minor impact on POM. Increasing the N application rate had minimal impact on POM and MAOM storage due to crop harvest and the balance between microbial activity and mineral protection mediated by soil acidification. These findings are valuable for facilitating the sequestration and increasing the stability of SOM in paddies, providing information for global soil carbon storage strategies.
{"title":"Distribution, Storage, and Factors Influencing Particulate and Mineral-Associated Organic Matter in Paddy Soils","authors":"Xia Wang, Zhaoliang Song, Xiaomin Yang, Yakov Kuzyakov, Yunying Fang, Laodong Guo, Iain P. Hartley, Qiang Li, Lele Wu, Zhenqing Zhang, Xiangbin Ran, Weiqi Wang, Yidong Wang, Yongchun Li, Yu Luo, Shaopan Xia, Zhengang Wang, Zhongkui Luo, Ji Chen, Cong-Qiang Liu, Hailong Wang","doi":"10.1029/2025GB008577","DOIUrl":"10.1029/2025GB008577","url":null,"abstract":"<p>Soil organic matter (SOM) reserves in paddies are approximately two times larger than those in upland soils, and therefore, rice paddies have a strong impact on terrestrial carbon (C) sequestration. Functional partitioning of SOM into particulate organic matter (POM) and mineral-associated organic matter (MAOM) facilitates our understanding of C sequestration capacity in paddy soils. We analyzed POM and MAOM contents in 104 samples of topsoil and 81 samples of subsoil collected from paddies, and investigated how climate, nitrogen (N) fertilization, and soil depth regulate POM and MAOM storage. MAOM was the predominant fraction (45.3%–63.7%) of SOM in all paddy soils. As the SOC content increased, POM increased linearly, while the increase rate of MAOM slowed down, indicating a tendency for MAOM to reach saturation. The influence of mineral types on POM and MAOM protection exhibited depth-dependent patterns: clay minerals showed stronger associations in topsoil, whereas amorphous iron oxides displayed increasing importance in subsoil. Climatic factors, particularly mean annual temperature (MAT), had contrasting effects on POM and MAOM storage: increasing MAT reduced MAOM content and stability while having a minor impact on POM. Increasing the N application rate had minimal impact on POM and MAOM storage due to crop harvest and the balance between microbial activity and mineral protection mediated by soil acidification. These findings are valuable for facilitating the sequestration and increasing the stability of SOM in paddies, providing information for global soil carbon storage strategies.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 9","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145101864","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Tides are a critical source of energy and influence transport in the ocean, with potential implications for biogeochemical cycling and biological production. Here, we quantify the influence of tides on nutrient transport and primary production in the northern Indian Ocean, where topographic features generate hotspots of tidal processes and primary production supports important regional food supply via aquaculture and fisheries. Using a high-resolution regional ocean model, we investigate the effects of diabatic tidal mixing (i.e., irreversible mixing that stirs nutrients) and adiabatic motions associated with internal tides (i.e., reversible motions that shift water masses without mixing) on primary production. We find that tides increase regional primary production by 5% on average, with seasonal increases reaching up to 10%–15% in open ocean regions and 30% in coastal regions. Tidal mixing sets the magnitude of tide-driven production by supplying nutrients to the euphotic zone, and controls the contrast between the stronger coastal response and milder open ocean response. Background stratification and nutricline depth control the seasonality in tide-driven production at a given location: tides accelerate the onset and delay termination of blooms in productive regions (e.g., Arabian Sea) and reinforce bloom peak in less productive regions (e.g., Bay of Bengal). Adiabatic motions have only a small effect, indicating that tidal influences can be effectively parameterized in global models without costly high spatio-temporal resolution and explicit tidal forcing. We discuss the influence of tidal mixing on biogeochemistry beyond primary production and how it may change in a warmer and more stratified ocean.
{"title":"Tides Boost Primary Production in the Indian Ocean","authors":"S. J. Ditkovsky, L. Resplandy","doi":"10.1029/2025GB008596","DOIUrl":"10.1029/2025GB008596","url":null,"abstract":"<p>Tides are a critical source of energy and influence transport in the ocean, with potential implications for biogeochemical cycling and biological production. Here, we quantify the influence of tides on nutrient transport and primary production in the northern Indian Ocean, where topographic features generate hotspots of tidal processes and primary production supports important regional food supply via aquaculture and fisheries. Using a high-resolution regional ocean model, we investigate the effects of diabatic tidal mixing (i.e., irreversible mixing that stirs nutrients) and adiabatic motions associated with internal tides (i.e., reversible motions that shift water masses without mixing) on primary production. We find that tides increase regional primary production by 5% on average, with seasonal increases reaching up to 10%–15% in open ocean regions and 30% in coastal regions. Tidal mixing sets the magnitude of tide-driven production by supplying nutrients to the euphotic zone, and controls the contrast between the stronger coastal response and milder open ocean response. Background stratification and nutricline depth control the seasonality in tide-driven production at a given location: tides accelerate the onset and delay termination of blooms in productive regions (e.g., Arabian Sea) and reinforce bloom peak in less productive regions (e.g., Bay of Bengal). Adiabatic motions have only a small effect, indicating that tidal influences can be effectively parameterized in global models without costly high spatio-temporal resolution and explicit tidal forcing. We discuss the influence of tidal mixing on biogeochemistry beyond primary production and how it may change in a warmer and more stratified ocean.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 9","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://agupubs.onlinelibrary.wiley.com/doi/epdf/10.1029/2025GB008596","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145021983","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Jamie D. Shutler, Daniel J. Ford, Thomas Holding, Clement Ubelmann, Lucile Gaultier, Fabrice Collard, Bertrand Chapron, Marie-Helene Rio, Callum Roberts, Craig Donlon
Continental shelf surface waters are considered a variable but increasing sink of atmospheric carbon dioxide (CO2), but the mechanisms controlling these increasing sinks are unclear. We identify that the winter wind-driven surface atmosphere-ocean CO2 gas exchange and wind-driven movement of water onto (or off of) shelf seas are consistent with the atmospheric CO2 uptake tendency of many shelf seas. A 20-year observational-based analysis shows that geostrophic, wind and wave driven currents all contribute to the surface shelf break water velocities, but the dominance of each is location and season dependent. Analyzing these flows for fourteen shelf-seas based on their 20-year long-term gradient in air-sea partial pressure of carbon dioxide (their atmospheric CO2 uptake tendency) identifies significant relationships between uptake tendency and winter (r2 = 0.72 ± 0.03, p < 0.01, n = 14) and autumn (r2 = 0.57 ± 0.05, p < 0.01, n = 14) wind-driven surface flows. These signals are most strong in winter, but the results are consistent at annual scales. Including the wintertime wind-driven air-sea CO2 gas exchange further enhances this result, and collectively they describe 82% of the variance in the atmospheric CO2 uptake tendency data (r2 = 0.82 ± 0.06, p < 0.01, n = 14). These findings identify that long-term wind-driven water flow and surface gas exchange are key mechanisms for controlling their chemical evolution and their status as CO2 sinks. This observational-based evidence highlights the need for these wind-driven processes to be resolved within methods used to predict or understand continental shelf-sea carbonate system state and ocean health.
大陆架地表水被认为是大气二氧化碳(CO2)的可变但不断增加的汇,但控制这些不断增加的汇的机制尚不清楚。我们发现冬季风驱动的表层大气-海洋CO2气体交换和风驱动的水进入(或离开)陆架海的运动与许多陆架海的大气CO2吸收趋势是一致的。一项基于20年观测的分析表明,地转、风和波浪驱动的洋流都对地表陆架破裂水的速度有贡献,但每种洋流的主导作用取决于地点和季节。根据14个陆架海20年的大气二氧化碳分压(大气二氧化碳吸收趋势)长期梯度分析,发现吸收趋势与冬季(r2 = 0.72±0.03,p < 0.01, n = 14)和秋季(r2 = 0.57±0.05,p < 0.01, n = 14)风致地面流之间存在显著关系。这些信号在冬季最为强烈,但结果在年尺度上是一致的。冬季风驱动的海气CO2气体交换进一步强化了这一结果,它们共同描述了82%的大气CO2吸收趋势数据的方差(r2 = 0.82±0.06,p < 0.01, n = 14)。这些发现表明,长期的风驱动水流和地表气体交换是控制其化学演化和作为二氧化碳汇地位的关键机制。这一基于观测的证据强调了在预测或了解大陆架-海碳酸盐系统状态和海洋健康的方法中解决这些风驱动过程的必要性。
{"title":"Wind-Driven Control of Shelf-Sea CO2 Sinks","authors":"Jamie D. Shutler, Daniel J. Ford, Thomas Holding, Clement Ubelmann, Lucile Gaultier, Fabrice Collard, Bertrand Chapron, Marie-Helene Rio, Callum Roberts, Craig Donlon","doi":"10.1029/2024GB008461","DOIUrl":"10.1029/2024GB008461","url":null,"abstract":"<p>Continental shelf surface waters are considered a variable but increasing sink of atmospheric carbon dioxide (CO<sub>2</sub>), but the mechanisms controlling these increasing sinks are unclear. We identify that the winter wind-driven surface atmosphere-ocean CO<sub>2</sub> gas exchange and wind-driven movement of water onto (or off of) shelf seas are consistent with the atmospheric CO<sub>2</sub> uptake tendency of many shelf seas. A 20-year observational-based analysis shows that geostrophic, wind and wave driven currents all contribute to the surface shelf break water velocities, but the dominance of each is location and season dependent. Analyzing these flows for fourteen shelf-seas based on their 20-year long-term gradient in air-sea partial pressure of carbon dioxide (their atmospheric CO<sub>2</sub> uptake tendency) identifies significant relationships between uptake tendency and winter (<i>r</i><sup>2</sup> = 0.72 ± 0.03, <i>p</i> < 0.01, <i>n</i> = 14) and autumn (<i>r</i><sup>2</sup> = 0.57 ± 0.05, <i>p</i> < 0.01, <i>n</i> = 14) wind-driven surface flows. These signals are most strong in winter, but the results are consistent at annual scales. Including the wintertime wind-driven air-sea CO<sub>2</sub> gas exchange further enhances this result, and collectively they describe 82% of the variance in the atmospheric CO<sub>2</sub> uptake tendency data (<i>r</i><sup>2</sup> = 0.82 ± 0.06, <i>p</i> < 0.01, <i>n</i> = 14). These findings identify that long-term wind-driven water flow and surface gas exchange are key mechanisms for controlling their chemical evolution and their status as CO<sub>2</sub> sinks. This observational-based evidence highlights the need for these wind-driven processes to be resolved within methods used to predict or understand continental shelf-sea carbonate system state and ocean health.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 9","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://agupubs.onlinelibrary.wiley.com/doi/epdf/10.1029/2024GB008461","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145021982","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
K. Oglethorpe, B. Fernández Castro, C. P. Spingys, A. C. Naveira Garabato, R. G. Williams
Sustaining phytoplankton primary production and organic carbon export requires the physical supply of nutrients to the sunlit ocean. In the extensive downwelling regions of the subtropical gyres, the pathways of this nutrient supply remain unclear. Vertical sinking of organic matter from the sunlit layer and its remineralization below cause net downward nutrient transfer in the upper subtropical ocean. Microscale mixing of nutrients across density surfaces and upwelling by mesoscale eddies and submesoscale fronts have been invoked to re-supply nutrients from the thermocline to the sunlit layer. However, a physical mechanism is required to replenish nutrients exported across the thermocline base and sustain a quasi-steady state upper-ocean nutrient budget on inter-annual timescales. Stirring along density surfaces by mesoscale eddies has emerged as a possible supply mechanism to close this nutrient budget. Here, we quantify the relative importance of mesoscale stirring and microscale mixing in supplying nutrients to the oligotrophic regions of the upper subtropical oceans, using global observationally based data sets for nutrients and diapycnal and isopycnal diffusivities. Mesoscale stirring dominates nutrient replenishment in the thermocline of subtropical gyres over microscale turbulence, contributing to 70%–90% of combined supply by the two processes. The stirring supply is most important along gyre flanks, where boundary currents and upwelling zones promote sharp nutrient gradients and vigorous mesoscale activity. Mesoscale fluxes provide sufficient nutrients to offset depletion in the thermocline due to upward microscale mixing into the sunlit layer. This analysis suggests that eddy stirring is significant in maintaining organic carbon export within subtropical gyres.
{"title":"The Role of Mesoscale Eddy Stirring and Microscale Turbulence in Sustaining Biological Production in the Subtropical Gyres","authors":"K. Oglethorpe, B. Fernández Castro, C. P. Spingys, A. C. Naveira Garabato, R. G. Williams","doi":"10.1029/2024GB008180","DOIUrl":"10.1029/2024GB008180","url":null,"abstract":"<p>Sustaining phytoplankton primary production and organic carbon export requires the physical supply of nutrients to the sunlit ocean. In the extensive downwelling regions of the subtropical gyres, the pathways of this nutrient supply remain unclear. Vertical sinking of organic matter from the sunlit layer and its remineralization below cause net downward nutrient transfer in the upper subtropical ocean. Microscale mixing of nutrients across density surfaces and upwelling by mesoscale eddies and submesoscale fronts have been invoked to re-supply nutrients from the thermocline to the sunlit layer. However, a physical mechanism is required to replenish nutrients exported across the thermocline base and sustain a quasi-steady state upper-ocean nutrient budget on inter-annual timescales. Stirring along density surfaces by mesoscale eddies has emerged as a possible supply mechanism to close this nutrient budget. Here, we quantify the relative importance of mesoscale stirring and microscale mixing in supplying nutrients to the oligotrophic regions of the upper subtropical oceans, using global observationally based data sets for nutrients and diapycnal and isopycnal diffusivities. Mesoscale stirring dominates nutrient replenishment in the thermocline of subtropical gyres over microscale turbulence, contributing to 70%–90% of combined supply by the two processes. The stirring supply is most important along gyre flanks, where boundary currents and upwelling zones promote sharp nutrient gradients and vigorous mesoscale activity. Mesoscale fluxes provide sufficient nutrients to offset depletion in the thermocline due to upward microscale mixing into the sunlit layer. This analysis suggests that eddy stirring is significant in maintaining organic carbon export within subtropical gyres.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 9","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://agupubs.onlinelibrary.wiley.com/doi/epdf/10.1029/2024GB008180","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144935183","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
D. A. Hansell, C. R. German, C. A. Carlson, E. R. M. Druffel, W. J. Jenkins, S. Q. Lang, B. M. Toner
Dissolved organic carbon (DOC) constitutes the largest pool of reduced carbon in the global ocean, with important contributions from both recently formed and aged, biologically refractory DOC (RDOC). The mechanisms regulating RDOC transformation and removal remain uncertain though hydrothermal vents have been identified as sources and sinks. This study examines RDOC sinks in the deep Pacific Ocean, highlighting the role of submarine hydrothermal systems. Geochemical survey data from GO-SHIP and GEOTRACES projects, alongside specific investigations of Pacific hydrothermal systems, suggest that particulate iron introduced by hydrothermal systems plays a key role in scavenging DOC and delivering it to the seafloor, leaving a deficit in the RDOC of the deep ocean. Dilution of the oceanic water column by hydrothermal fluids exhibiting low DOC concentrations likely plays a secondary role.
{"title":"Hydrothermally Induced Refractory DOC Sinks in the Deep Pacific Ocean","authors":"D. A. Hansell, C. R. German, C. A. Carlson, E. R. M. Druffel, W. J. Jenkins, S. Q. Lang, B. M. Toner","doi":"10.1029/2025GB008659","DOIUrl":"10.1029/2025GB008659","url":null,"abstract":"<p>Dissolved organic carbon (DOC) constitutes the largest pool of reduced carbon in the global ocean, with important contributions from both recently formed and aged, biologically refractory DOC (RDOC). The mechanisms regulating RDOC transformation and removal remain uncertain though hydrothermal vents have been identified as sources and sinks. This study examines RDOC sinks in the deep Pacific Ocean, highlighting the role of submarine hydrothermal systems. Geochemical survey data from GO-SHIP and GEOTRACES projects, alongside specific investigations of Pacific hydrothermal systems, suggest that particulate iron introduced by hydrothermal systems plays a key role in scavenging DOC and delivering it to the seafloor, leaving a deficit in the RDOC of the deep ocean. Dilution of the oceanic water column by hydrothermal fluids exhibiting low DOC concentrations likely plays a secondary role.</p>","PeriodicalId":12729,"journal":{"name":"Global Biogeochemical Cycles","volume":"39 9","pages":""},"PeriodicalIF":5.5,"publicationDate":"2025-09-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://agupubs.onlinelibrary.wiley.com/doi/epdf/10.1029/2025GB008659","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144929513","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}