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Yishen Gushu formula exerts osteoprotective effects in OVX-Induced PMOP rats: role of ferroptosis Inhibition and iron metabolism correction. 益肾骨疏方对ovx诱导的ppu大鼠的骨保护作用:抑制铁下垂和纠正铁代谢的作用
IF 2.5 3区 生物学 Pub Date : 2026-02-04 DOI: 10.1186/s41065-026-00642-5
Bo Jin, Hao Zeng, ZhiFeng Wei, YongJin Li, XiaoYun Zhang
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引用次数: 0
Multi-omics integration in deciphering non-small cell lung cancer drug resistance: current status, challenges, and future prospects. 多组学整合非小细胞肺癌耐药:现状、挑战和未来展望
IF 2.5 3区 生物学 Pub Date : 2026-02-02 DOI: 10.1186/s41065-025-00570-w
Jidong Miao, Wenqiang Guan, Jing Wang, Huiying Gong, Qian Xie, Yang Gao

Lung cancer is the leading cause of cancer-related deaths globally. Non-small cell lung cancer (NSCLC) accounts for approximately 85% of all lung cancer cases, and drug resistance severely undermines treatment efficacy. This review summarizes recent advances in elucidating NSCLC drug-resistance mechanisms using multi-omics integration. Multi-omics integration systematically reveals the molecular networks of drug resistance, identifies key biomarkers and targets, and facilitates the screening of high-priority candidates for drug development through experimental validation. Small-molecule inhibitors targeting drug-resistant proteins and multi-omics-guided combination therapies offer strategies to reverse resistance. Future directions involve developing simultaneous multi-omics detection technologies, leveraging artificial intelligence for intelligent data analysis, establishing standardized frameworks for data sharing, and implementing personalized medicine based on multi-omics to improve patient prognosis.

肺癌是全球癌症相关死亡的主要原因。非小细胞肺癌(NSCLC)约占所有肺癌病例的85%,耐药严重影响治疗效果。本文综述了利用多组学整合研究非小细胞肺癌耐药机制的最新进展。多组学集成系统地揭示了耐药的分子网络,确定了关键的生物标志物和靶点,并通过实验验证促进了药物开发高优先级候选药物的筛选。靶向耐药蛋白的小分子抑制剂和多组学指导的联合治疗提供了逆转耐药的策略。未来的发展方向包括发展同步多组学检测技术,利用人工智能进行智能数据分析,建立标准化的数据共享框架,以及实施基于多组学的个性化医疗,以改善患者预后。
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引用次数: 0
Unraveling the complexities of caffeine: metabolism, genetics, evolution, and health. 揭示咖啡因的复杂性:新陈代谢、基因、进化和健康。
IF 2.5 3区 生物学 Pub Date : 2026-02-02 DOI: 10.1186/s41065-026-00648-z
Xinyi Liu, Shuhua Xu
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引用次数: 0
Identification and validation of energy metabolism-related genes in diabetic kidney disease through integrated bioinformatics and in vivo analysis. 通过综合生物信息学和体内分析鉴定和验证糖尿病肾病的能量代谢相关基因。
IF 2.5 3区 生物学 Pub Date : 2026-01-28 DOI: 10.1186/s41065-026-00632-7
Hui Jiang, Ming-Hui Geng, Yue-Mei Zhan, Jin-Feng Shen, Fu-Zhen Wang, Sen-Qing Lin, Zhe Hong, Chun-Hua Guo, Jin-Xiu Deng, Sen-Chao Wu

Background: The primary renal complication of diabetes mellitus is diabetic kidney disease (DKD). The precise pathogenic mechanisms of DKD remain poorly elucidated. The aim of this study was to identify potential energy metabolism-related genes associated with DKD.

Methods: The GSE30529 and GSE30528 datasets were retrieved from the Gene Expression Omnibus, and energy metabolism-related genes were obtained from the GeneCards database. Differentially expressed genes (DEGs) between DKD and control groups were analyzed. The biological functions and signaling pathways of these DEGs were evaluated using Gene Ontology (GO), the Kyoto Encyclopedia of Genes and Genomes (KEGG), and gene set enrichment analysis (GSEA). The diagnostic performance of hub genes for DKD was assessed using receiver operating characteristic (ROC) curve analysis. Expression levels of five significant energy metabolism-related genes were validated through immunohistochemistry. The Nephroseq V5 tool was used to evaluate gene expression in DKD and to determine correlations between gene expression and renal function in patients with DKD.

Results: A total of 17 energy metabolism-related DEGs were identified. Five hub genes-ALB, IGF1, CD36, LPL, and UCP2-were identified. Among these, CD36 and LPL demonstrated relatively high diagnostic accuracy for DKD. The findings suggest that CD36, IGF1, LPL, and UCP2 may serve as potential biomarkers for DKD.

Conclusions: The genes CD36, IGF1, LPL, and UCP2 represent potential energy metabolism-related biomarkers with possible applications in the diagnosis and treatment of DKD.

背景:糖尿病的主要肾脏并发症是糖尿病肾病(DKD)。DKD的确切致病机制尚不清楚。本研究的目的是鉴定与DKD相关的潜在能量代谢相关基因。方法:从Gene Expression Omnibus检索GSE30529和GSE30528数据集,从GeneCards数据库获取能量代谢相关基因。分析DKD组与对照组之间的差异表达基因(DEGs)。利用基因本体(GO)、京都基因与基因组百科全书(KEGG)和基因集富集分析(GSEA)对这些基因的生物学功能和信号通路进行了评估。采用受试者工作特征(ROC)曲线分析评估枢纽基因对DKD的诊断效能。通过免疫组织化学验证5个重要能量代谢相关基因的表达水平。使用Nephroseq V5工具评估DKD患者的基因表达,并确定DKD患者基因表达与肾功能之间的相关性。结果:共鉴定出17个与能量代谢相关的deg。鉴定出5个中心基因:alb、IGF1、CD36、LPL和ucp2。其中CD36和LPL对DKD的诊断准确率较高。研究结果表明,CD36、IGF1、LPL和UCP2可能是DKD的潜在生物标志物。结论:CD36、IGF1、LPL和UCP2基因是潜在的能量代谢相关生物标志物,可能在DKD的诊断和治疗中应用。
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引用次数: 0
Ginsenoside Rg1 delays the senescence of adipose-derived stem cells: network pharmacology and experimental validation. 人参皂苷Rg1延缓脂肪干细胞的衰老:网络药理学和实验验证。
IF 2.5 3区 生物学 Pub Date : 2026-01-27 DOI: 10.1186/s41065-026-00646-1
Yuan Fang, Chenghong Mou, Xinlang Yu, Jiakang Zhang, Weina Zhu, Chungen Zhou, Bin Jiang, Yanni Chen
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引用次数: 0
Clinical relevance and mechanistic investigation of miR-1908-5p as a prognostic biomarker in colorectal cancer. miR-1908-5p作为结直肠癌预后生物标志物的临床相关性及机制研究
IF 2.5 3区 生物学 Pub Date : 2026-01-27 DOI: 10.1186/s41065-026-00645-2
Chenchen Yuan, Shaofei Chen, Qianli Liu, Riwei Wang

Background: Colorectal cancer (CRC) is characterized by a complex pathogenesis and substantial heterogeneity in prognosis.

Objective: This study aims to elucidate the clinical significance of miR-1908-5p in CRC, as well as its association with clinicopathological parameters and patient prognosis.

Method: miR-1908-5p expression in tumor tissues was quantified by RT-qPCR. Survival outcomes were assessed using the Kaplan-Meier method. The chi-square (χ2) test and Cox regression analysis were employed to evaluate clinicopathological correlations and prognostic value.miR-1908-5p was compared between NCM460 and CRC lines (HT-29, HCT116), overexpressed, and functionally tested by CCK-8 and Transwell assays. TargetScan and luciferase assay verified the targeting of SCAMP4 3'-UTR. qPCR and Pearson analysis defined their correlation in CRC.

Results: miR-1908-5p is downregulated in CRC tumors versus adjacent normal mucosal tissues. Low expression predicts poor prognosis and is associated with reduced survival rates in colorectal cancer, correlating with advanced TNM stage and elevated serum CA19-9 levels. CRC lines (HT-29 and HCT116) show reduced miR-1908-5p compared to NCM460. miR-1908-5p mimic suppresses proliferation, migration, and invasion. TargetScan-predicted binding to SCAMP4 3'-UTR was validated by dual-luciferase reporter assay. miR-1908-5p overexpression lowers SCAMP4, which is overexpressed in tumor tissues and exhibits an inverse correlation with miR-1908-5p.

Conclusion: miR-1908-5p is downregulated in CRC, correlates with TNM stage, nodal metastasis, elevated CA19-9 levels, and poor survival, and suppresses CRC cell proliferation, migration, and invasion by directly targeting SCAMP4, thereby qualifying as a potential prognostic biomarker for CRC.

背景:结直肠癌(CRC)具有复杂的发病机制和预后异质性。目的:本研究旨在阐明miR-1908-5p在结直肠癌中的临床意义,以及其与临床病理参数和患者预后的关系。方法:采用RT-qPCR法检测miR-1908-5p在肿瘤组织中的表达。生存结果采用Kaplan-Meier法评估。采用χ2检验和Cox回归分析评价临床病理相关性及预后价值。将miR-1908-5p在NCM460和CRC细胞系(HT-29, HCT116)之间进行比较,通过CCK-8和Transwell试验进行过表达和功能检测。TargetScan和荧光素酶实验证实了SCAMP4 3’-UTR的靶向性。qPCR和Pearson分析确定了它们在结直肠癌中的相关性。结果:与邻近正常粘膜组织相比,miR-1908-5p在结直肠癌肿瘤中下调。低表达预示预后不良,与结直肠癌生存率降低相关,与TNM晚期和血清CA19-9水平升高相关。与NCM460相比,CRC细胞系(HT-29和HCT116)显示miR-1908-5p降低。miR-1908-5p mimic抑制增殖、迁移和侵袭。targetscan预测的与SCAMP4 3'-UTR的结合通过双荧光素酶报告基因试验验证。miR-1908-5p过表达降低SCAMP4, SCAMP4在肿瘤组织中过表达,与miR-1908-5p呈负相关。结论:miR-1908-5p在结直肠癌中下调,与TNM分期、淋巴结转移、CA19-9水平升高和生存率差相关,并通过直接靶向SCAMP4抑制结直肠癌细胞增殖、迁移和侵袭,因此有资格作为结直肠癌的潜在预后生物标志物。
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引用次数: 0
Ferroptosis-dependent small extracellular vesicles ULK1 enhances mitophagy and suppresses breast cancer migration. 凋亡铁依赖的细胞外小泡ULK1增强有丝分裂并抑制乳腺癌迁移。
IF 2.5 3区 生物学 Pub Date : 2026-01-26 DOI: 10.1186/s41065-025-00621-2
Anan Wang, Min Chen, Yonghui Luo, Li Li, Jiahao Rong, Lei Liu, Chenghao Yi
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引用次数: 0
Linc01748 regulates the prognosis and related mechanisms of gastric cancer by targeting miR-130a-5p. Linc01748通过靶向miR-130a-5p调控胃癌预后及相关机制。
IF 2.5 3区 生物学 Pub Date : 2026-01-24 DOI: 10.1186/s41065-026-00634-5
Hui Li, Zhiling Zhong, Yuhan Li, Meini Cen
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引用次数: 0
miR-596 as a novel prognostic biomarker and tumor suppressor in breast cancer through targeting EIF5AL1. miR-596通过靶向EIF5AL1在乳腺癌中作为一种新的预后生物标志物和肿瘤抑制因子。
IF 2.5 3区 生物学 Pub Date : 2026-01-22 DOI: 10.1186/s41065-026-00641-6
Rui Huang, Yan Jiang, Yan Bian, Dengyuan Zhong, Baoyong Lv

Background: In terms of global incidence and mortality, breast cancer continues to surpass all other cancers affecting women.

Methods: To explore the role of miR-596, qRT-PCR was applied to measure its expression in tissue and cell samples from 137 enrolled subjects. The regulatory interaction between miR-596 and EIF5AL1 was verified by dual-luciferase reporter assays. CCK-8 and Transwell assays were utilized to respectively measure the proliferation, migration, and invasion capabilities of the two breast cancer cell lines, MCF-7 and MDA-MB-231.

Results: A significant downregulation of miR-596 was observed in breast cancer tissues and cell lines (all P < 0.001). Clinically, reduced miR-596 expression was associated with advanced TNM stage, lymph node metastasis, and inferior overall survival (P < 0.05). EIF5AL1 was validated as a direct target gene of miR-596, and their expression levels were inversely correlated in clinical samples (r = -0.801, P < 0.001). Reintroduction of miR-596 markedly suppressed the proliferation, migration, and invasion of cancer cells, effects that were largely reversed by overexpressing EIF5AL1 (all P < 0.001).

Conclusion: In breast cancer, miR-596 suppresses malignancy and predicts prognosis by targeting EIF5AL1. Thus, therapeutic modulation of this axis offers novel avenues for treatment and risk assessment.

背景:就全球发病率和死亡率而言,乳腺癌继续超过影响妇女的所有其他癌症。方法:为了探索miR-596的作用,采用qRT-PCR方法检测其在137名入组受试者的组织和细胞样本中的表达。通过双荧光素酶报告基因检测证实了miR-596和EIF5AL1之间的调控相互作用。CCK-8和Transwell法分别测定MCF-7和MDA-MB-231两种乳腺癌细胞系的增殖、迁移和侵袭能力。结果:miR-596在乳腺癌组织和细胞系中显著下调(均为P)。结论:在乳腺癌中,miR-596通过靶向EIF5AL1抑制恶性肿瘤并预测预后。因此,对该轴的治疗性调节为治疗和风险评估提供了新的途径。
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引用次数: 0
Genetic polymorphism of long non-coding RNA TUG1 and susceptibility to polycystic ovary syndrome: a case-control study. 长链非编码RNA TUG1遗传多态性与多囊卵巢综合征易感性:一项病例对照研究
IF 2.5 3区 生物学 Pub Date : 2026-01-22 DOI: 10.1186/s41065-026-00638-1
Hua Zhang, Wei Liu, Xueqian Liu, Jingjing Ren, Yijiao Cheng, Yanjiao Liu, Yanjun Wu

Background: Dysregulated expression of long non-coding RNA (lncRNA) TUG1 participates in the etiopathogenesis of polycystic ovary syndrome (PCOS). This study analyzed the genetic association of the TUG1 rs5749201 polymorphism in PCOS patients.

Methods: Genotype and allele distributions of rs5749201 were analyzed in 210 PCOS patients and 230 healthy volunteers. Serum TUG1 levels were detected via qRT-PCR. The relationship between gene polymorphism and PCOS risk was analyzed via multivariate logistic regression.

Results: Compared with the control group, the PCOS group had a significantly higher proportion of carriers with TUG1 rs5749201 AA genotype and a lower proportion of TT genotype carriers. Rs5749201 TT genotype carriers had notably reduced PCOS risk. This genetic association was also found in dominant and recessive models, with the locus independently linked to PCOS (OR = 0.427, 95%CI: 0.242-0.753; P = 0.003). AA genotype carriers had higher LDL, TG and FBS than AT/TT genotype carriers. PCOS patients had elevated TUG1 levels, with AA genotype carriers showing the highest.

Conclusion: TUG1 rs5749201 was linked to PCOS susceptibility, which is correlated with its regulatory role in TUG1 expression.

背景:长链非编码RNA (lncRNA) TUG1表达异常参与多囊卵巢综合征(PCOS)的发病过程。本研究分析了TUG1 rs5749201多态性与PCOS患者的遗传关系。方法:对210例PCOS患者和230名健康志愿者的rs5749201基因型和等位基因分布进行分析。采用qRT-PCR检测血清TUG1水平。采用多因素logistic回归分析基因多态性与PCOS发病的关系。结果:与对照组相比,PCOS组TUG1 rs5749201 AA基因型携带者比例明显高于对照组,TT基因型携带者比例明显低于对照组。Rs5749201 TT基因型携带者PCOS风险显著降低。在显性和隐性模型中也发现了这种遗传关联,该位点与PCOS独立相关(OR = 0.427, 95%CI: 0.242-0.753; P = 0.003)。AA基因型携带者LDL、TG和FBS高于AT/TT基因型携带者。PCOS患者TUG1水平升高,以AA基因型携带者最高。结论:TUG1 rs5749201与PCOS易感性相关,并与其对TUG1表达的调控作用相关。
{"title":"Genetic polymorphism of long non-coding RNA TUG1 and susceptibility to polycystic ovary syndrome: a case-control study.","authors":"Hua Zhang, Wei Liu, Xueqian Liu, Jingjing Ren, Yijiao Cheng, Yanjiao Liu, Yanjun Wu","doi":"10.1186/s41065-026-00638-1","DOIUrl":"10.1186/s41065-026-00638-1","url":null,"abstract":"<p><strong>Background: </strong>Dysregulated expression of long non-coding RNA (lncRNA) TUG1 participates in the etiopathogenesis of polycystic ovary syndrome (PCOS). This study analyzed the genetic association of the TUG1 rs5749201 polymorphism in PCOS patients.</p><p><strong>Methods: </strong>Genotype and allele distributions of rs5749201 were analyzed in 210 PCOS patients and 230 healthy volunteers. Serum TUG1 levels were detected via qRT-PCR. The relationship between gene polymorphism and PCOS risk was analyzed via multivariate logistic regression.</p><p><strong>Results: </strong>Compared with the control group, the PCOS group had a significantly higher proportion of carriers with TUG1 rs5749201 AA genotype and a lower proportion of TT genotype carriers. Rs5749201 TT genotype carriers had notably reduced PCOS risk. This genetic association was also found in dominant and recessive models, with the locus independently linked to PCOS (OR = 0.427, 95%CI: 0.242-0.753; P = 0.003). AA genotype carriers had higher LDL, TG and FBS than AT/TT genotype carriers. PCOS patients had elevated TUG1 levels, with AA genotype carriers showing the highest.</p><p><strong>Conclusion: </strong>TUG1 rs5749201 was linked to PCOS susceptibility, which is correlated with its regulatory role in TUG1 expression.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":" ","pages":"27"},"PeriodicalIF":2.5,"publicationDate":"2026-01-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12911283/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146018280","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Hereditas
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