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Single-cell transcriptomic analysis of peripheral blood mononuclear cells reveals key immune responses in ST-segment elevation myocardial infarction. 外周血单核细胞单细胞转录组学分析揭示st段抬高型心肌梗死的关键免疫反应。
IF 2.5 3区 生物学 Pub Date : 2025-11-25 DOI: 10.1186/s41065-025-00609-y
Zheng Zhang, Shengfang Wang, Yahui Liu, Gaohan Li, Qianqian Cheng, Wei Yang, Ganxin Yan, Chuanyu Gao
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引用次数: 0
Identification and validation of shared key genes between Parkinson's disease and erectile dysfunction: a bioinformatics approach. 帕金森病和勃起功能障碍之间共享关键基因的鉴定和验证:生物信息学方法。
IF 2.5 3区 生物学 Pub Date : 2025-11-25 DOI: 10.1186/s41065-025-00614-1
Yincheng Fan, Guangqian Gao, Yurong Xiang, Haibo Zhang, Shuhua He, Anyang Wei

Background: Erectile dysfunction (ED) and Parkinson's disease (PD) are prevalent conditions that considerably impair patients' quality of life. Emerging evidence suggests a potential relationship between ED and PD, possibly mediated by shared biological mechanisms. This research seeks to examine shared transcriptomic alterations and the underlying biological pathways associated with ED and PD.

Methods: Gene expression profiles related to ED and PD were derived from the Gene Expression Omnibus database, specifically the GSE2457 and GSE7621 datasets. Differentially expressed genes (DEGs) between patients and controls were identified through differential expression analysis. Functional enrichment analyses, including Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway and Gene Ontology analyses, were carried out to uncover the biological roles of the identified DEGs. To refine and validate potential key genes, machine learning algorithms, such as support vector machine-recursive feature elimination and LASSO regression, were employed. Immune infiltration analysis was carried out to examine potential immune responses related to the identified genes. Additionally, miRNA-gene and protein-protein interaction networks were established. Finally, the reliability of the selected genes was validated through external and experimental verification.

Results: In total, 25 overlapping DEGs were identified between ED and PD. Functional enrichment analysis demonstrated that these DEGs were involved in such biological processes as redox homeostasis and neuronal cell body function. KEGG pathway analysis indicated significant enrichment in pathways such as adrenergic signaling, cGMP-PKG signaling. Machine learning algorithms further refined the candidate genes, with SHOX2 and PIK3R6 demonstrating strong diagnostic potential. Immune infiltration analysis demonstrated correlations between the gene expression levels and various immune cell types. The constructed miRNA-gene regulatory networks revealed possible post-transcriptional regulatory mechanisms that modulated the expression of these genes. Finally, the diagnostic performance of these genes was verified in external datasets, with their performance further confirmed by ROC analysis and experimental verification.

Conclusion: This study identified the shared biological target between ED and PD through bioinformatics analyses. The key genes SHOX2 and PIK3R6 may serve as potential biomarkers. These results may offer new insights into the molecular mechanisms linking ED and PD.

背景:勃起功能障碍(ED)和帕金森病(PD)是严重影响患者生活质量的常见疾病。新出现的证据表明ED和PD之间存在潜在的关系,可能是由共同的生物学机制介导的。本研究旨在研究与ED和PD相关的共同转录组改变和潜在的生物学途径。方法:ED和PD相关的基因表达谱来源于Gene expression Omnibus数据库,特别是GSE2457和GSE7621数据集。通过差异表达分析,鉴定患者与对照组之间的差异表达基因(DEGs)。功能富集分析,包括京都基因与基因组百科全书(KEGG)途径和基因本体分析,以揭示鉴定的deg的生物学作用。为了细化和验证潜在的关键基因,采用了支持向量机递归特征消除和LASSO回归等机器学习算法。进行免疫浸润分析,以检测与所鉴定基因相关的潜在免疫反应。此外,还建立了mirna -基因和蛋白-蛋白相互作用网络。最后,通过外部验证和实验验证所选基因的可靠性。结果:在ED和PD之间共鉴定出25个重叠的deg。功能富集分析表明,这些deg参与氧化还原稳态和神经元细胞体功能等生物过程。KEGG通路分析显示,肾上腺素能信号通路、cGMP-PKG信号通路显著富集。机器学习算法进一步细化了候选基因,SHOX2和PIK3R6显示出强大的诊断潜力。免疫浸润分析显示基因表达水平与各种免疫细胞类型之间存在相关性。构建的mirna基因调控网络揭示了调控这些基因表达的可能的转录后调控机制。最后,在外部数据集中验证这些基因的诊断性能,并通过ROC分析和实验验证进一步证实其诊断性能。结论:本研究通过生物信息学分析确定了ED和PD之间的共同生物学靶点。关键基因SHOX2和PIK3R6可能是潜在的生物标志物。这些结果可能为ED和PD的分子机制提供新的见解。
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引用次数: 0
Coptisine regulates PI3K/AKT pathway to block bladder cancer progression: a study based on network pharmacology, in vitro and in vivo assays. 黄柏碱调节PI3K/AKT通路阻断膀胱癌进展:基于网络药理学、体外和体内实验的研究
IF 2.5 3区 生物学 Pub Date : 2025-11-24 DOI: 10.1186/s41065-025-00600-7
Yu Xiaohui, Li Jie, Zhou Jiangqiao

Background: Coptisine (COP) is a natural compound extracted from Rhizoma Coptidis, and it represses the malignant biological behaviors of bladder cancer cells. However, the underlying molecular mechanism has not been fully elucidated. The aim of this study was to clarify the downstream mechanism by which COP treats bladder cancer.

Materials and methods: SwissTargetPrediction, STITCH, SymMap, ETCM, TCMSP, CTD databases were used to collect the related targets of COP. GeneCards, DisGeNET, TTD and OMIM databases were used to obtain the related targets of bladder cancer. A Venn diagram was used to identify the potential targets of COP in bladder cancer treatment. The protein-protein interaction network was constructed using STRING database, and Cytoscape 3.9.0 software was used to screen the hub targets. The binding relationship between COP and the hub targets was verified by molecular docking and molecular dynamics simulation. After the bladder cell lines T24 and BIU-87 were treated with different doses of COP, the regulatory effects of COP on PI3K/AKT pathway were investigated with western blotting. Additionally, the tumor-suppressive properties of COP on bladder cancer cells were validated with tumorigenesis model and metastasis model in nude mice.

Results: RAC-alpha serine/threonine-protein kinase 1 (AKT1), glycogen synthase kinase 3 beta (GSK3B), caspase-3 (CASP3), tumor necrosis factor (TNF) and cyclin D1 (CCND1) were identified as the main hub targets of COP in bladder cancer treatment. PI3K/AKT pathway was predicted to be a crucial pathway regulated by COP. The binding affinities between COP and AKT1, GSK3B, CASP3, TNF and CCND1 were high. COP treatment markedly repressed the phosphorylation level of ERK1/2, AKT1, PI3K p85 and mTOR in T24 and BIU-87 cells, and repressed the tumorigenesis and lung/liver metastasis of T24 cells in vivo.

Conclusion: COP may be a natural inhibitor for AKT1, GSK3B, CASP3, TNF and CCND1. COP represses PI3K/AKT pathway to suppress the progression of bladder cancer.

背景:黄连碱(Coptisine, COP)是从黄连中提取的一种天然化合物,具有抑制膀胱癌细胞恶性生物学行为的作用。然而,其潜在的分子机制尚未完全阐明。本研究旨在阐明COP治疗膀胱癌的下游机制。材料与方法:使用SwissTargetPrediction、STITCH、SymMap、ETCM、TCMSP、CTD数据库收集COP的相关靶点。使用GeneCards、DisGeNET、TTD和OMIM数据库获取膀胱癌的相关靶点。使用维恩图来确定COP在膀胱癌治疗中的潜在靶点。利用STRING数据库构建蛋白-蛋白相互作用网络,利用Cytoscape 3.9.0软件筛选枢纽靶点。通过分子对接和分子动力学模拟验证了COP与枢纽靶点的结合关系。用不同剂量的COP处理膀胱细胞株T24和BIU-87后,采用western blotting检测COP对PI3K/AKT通路的调控作用。此外,通过裸鼠肿瘤发生模型和转移模型验证了COP对膀胱癌细胞的抑瘤作用。结果:发现acc - α丝氨酸/苏氨酸蛋白激酶1 (AKT1)、糖原合成酶激酶3 β (GSK3B)、caspase-3 (CASP3)、肿瘤坏死因子(TNF)和细胞周期蛋白D1 (CCND1)是COP治疗膀胱癌的主要枢纽靶点。预测PI3K/AKT通路是COP调控的关键通路。COP与AKT1、GSK3B、CASP3、TNF和CCND1的结合亲和力较高。COP处理显著抑制T24和BIU-87细胞ERK1/2、AKT1、PI3K、p85和mTOR磷酸化水平,抑制T24细胞体内肿瘤发生和肺/肝转移。结论:COP可能是AKT1、GSK3B、CASP3、TNF和CCND1的天然抑制剂。COP通过抑制PI3K/AKT通路抑制膀胱癌的进展。
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引用次数: 0
Bioinformatics-based study on the regulatory network of lipid metabolism-related genes and mechanisms in coronary heart disease. 基于生物信息学的冠心病脂质代谢相关基因调控网络及机制研究。
IF 2.5 3区 生物学 Pub Date : 2025-11-24 DOI: 10.1186/s41065-025-00603-4
Zunxiong Xiao, Liping Wang, Haoqing Shao, Xiaoying Tian, Qinfang Zheng, Xudong Li

Coronary heart disease (CHD), is a complex cardiovascular disease driven by atherosclerosis, resulting from a dynamic interplay between dysregulated lipid metabolism and chronic inflammation. This study integrates bioinformatics analysis of GEO datasets with experimental validation to dissect molecular mechanisms underlying CHD pathogenesis. A total of 487 differentially expressed genes (DEGs) were identified (including 295 upregulated and 192 downregulated), with hub genes such as CD36, ALDH2, TNF-α, and IL1B highlighted in lipid handling, oxidative stress, and pro-inflammatory cascades. Weighted gene co-expression network analysis (WGCNA) revealed aberrant activation of lipid metabolism-related modules in CHD patients. KEGG enrichment highlighted their involvement in fatty acid transport, cholesterol homeostasis, NF-κB, and the IL-17 signaling. LASSO regression, applied to the combined datasets, identified SERPINA1, and GLUL as diagnostic biomarkers, with in vitro models supporting their pro-atherogenic roles in oxLDL-induced endothelial injury. Animal experiments further validated these findings: CHD rat models exhibited marked upregulation of SERPINA1, and GLUL in myocardial tissue, paralleled by increased M1 macrophage infiltration. Together, this study delineates the intricate lipid-immune axis in CHD and proposes novel candidate biomarkers and therapeutic targets, underscoring their potential for advancing precision medicine in CHD.

冠心病(冠心病)是由动脉粥样硬化驱动的复杂心血管疾病,是脂质代谢失调和慢性炎症相互作用的结果。本研究将GEO数据集的生物信息学分析与实验验证相结合,以剖析冠心病发病机制的分子机制。共鉴定出487个差异表达基因(DEGs)(包括295个上调基因和192个下调基因),中心基因如CD36、ALDH2、TNF-α和IL1B在脂质处理、氧化应激和促炎级联反应中突出。加权基因共表达网络分析(WGCNA)揭示了冠心病患者脂质代谢相关模块的异常激活。KEGG的富集表明它们参与脂肪酸转运、胆固醇稳态、NF-κB和IL-17信号传导。LASSO回归应用于联合数据集,确定SERPINA1和GLUL作为诊断性生物标志物,体外模型支持它们在氧化低密度脂蛋白诱导的内皮损伤中的促动脉粥样硬化作用。动物实验进一步证实了这些发现:冠心病大鼠模型显示心肌组织SERPINA1和GLUL明显上调,并伴有M1巨噬细胞浸润增加。总之,本研究描述了冠心病中复杂的脂质免疫轴,并提出了新的候选生物标志物和治疗靶点,强调了它们在推进冠心病精准医学方面的潜力。
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引用次数: 0
Challenges of ECMO use for severe trauma: a narrative review. ECMO用于严重创伤的挑战:叙述性回顾。
IF 2.5 3区 生物学 Pub Date : 2025-11-22 DOI: 10.1186/s41065-025-00611-4
Xin-Liang Zhang, Ying-Qi Zhang, Zhi-Yong Hou, Wei Chen

Background: Patients with severe trauma are at high risk of developing life-threatening complications, including acute respiratory failure and circulatory collapse. Extracorporeal membrane oxygenation (ECMO) offers critical support when conventional therapies fail. This narrative review aimed to analyze the clinical application of ECMO in patients with severe trauma, focusing on indications, complications, prognostic factors, and future directions.

Methods: A comprehensive literature search was conducted to identify studies published between January 2000 and April 2025. Sources included original research articles, systematic reviews, and meta-analyses, supplemented by relevant clinical guidelines and expert consensus statements pertaining to ECMO use in trauma care.

Results: Veno-venous ECMO has been primarily utilized in patients with trauma-associated acute respiratory distress syndrome, while veno-arterial ECMO has been employed in the management of cardiogenic shock and cardiac arrest. Reported survival rates were 72.3% for veno-venous ECMO and 39.0% for veno-arterial ECMO. ECMO has also been used in patients with traumatic brain injury and those undergoing extracorporeal cardiopulmonary resuscitation, although randomized controlled trial data remain limited Major complications include infection, hemorrhage, and thrombosis, which require coordinated prevention and management strategies. Prognostic tools such as the New Injury Severity Score, Simplified Acute Physiology Score III, and Sequential Organ Failure Assessment score are used in clinical evaluation, though trauma-specific models are still lacking.

Conclusion: ECMO offers a supportive treatment modality in the management of patients with severe trauma. To improve clinical outcomes, further development of trauma-specific decision tools, multicenter studies, and standardized protocols for anticoagulation and infection control is necessary to support individualized care.

背景:严重创伤患者发生危及生命的并发症的风险很高,包括急性呼吸衰竭和循环衰竭。当常规治疗失败时,体外膜氧合(ECMO)提供了关键的支持。本文旨在分析ECMO在严重创伤患者中的临床应用,重点讨论适应证、并发症、预后因素和未来发展方向。方法:对2000年1月至2025年4月间发表的研究进行综合文献检索。资料来源包括原始研究文章、系统综述和荟萃分析,并辅以有关ECMO在创伤护理中的应用的相关临床指南和专家共识声明。结果:静脉-静脉ECMO主要用于创伤相关急性呼吸窘迫综合征患者,而静脉-动脉ECMO已用于心源性休克和心脏骤停的治疗。据报道,静脉-静脉ECMO的存活率为72.3%,静脉-动脉ECMO的存活率为39.0%。尽管随机对照试验数据仍然有限,但ECMO也被用于创伤性脑损伤患者和体外心肺复苏患者,主要并发症包括感染、出血和血栓形成,需要协调的预防和管理策略。预后工具,如新损伤严重程度评分,简化急性生理评分III,顺序器官衰竭评估评分用于临床评估,尽管创伤特异性模型仍然缺乏。结论:ECMO是治疗严重创伤患者的一种支持性治疗方式。为了改善临床结果,有必要进一步发展创伤特异性决策工具、多中心研究和抗凝和感染控制的标准化方案,以支持个性化护理。
{"title":"Challenges of ECMO use for severe trauma: a narrative review.","authors":"Xin-Liang Zhang, Ying-Qi Zhang, Zhi-Yong Hou, Wei Chen","doi":"10.1186/s41065-025-00611-4","DOIUrl":"10.1186/s41065-025-00611-4","url":null,"abstract":"<p><strong>Background: </strong>Patients with severe trauma are at high risk of developing life-threatening complications, including acute respiratory failure and circulatory collapse. Extracorporeal membrane oxygenation (ECMO) offers critical support when conventional therapies fail. This narrative review aimed to analyze the clinical application of ECMO in patients with severe trauma, focusing on indications, complications, prognostic factors, and future directions.</p><p><strong>Methods: </strong>A comprehensive literature search was conducted to identify studies published between January 2000 and April 2025. Sources included original research articles, systematic reviews, and meta-analyses, supplemented by relevant clinical guidelines and expert consensus statements pertaining to ECMO use in trauma care.</p><p><strong>Results: </strong>Veno-venous ECMO has been primarily utilized in patients with trauma-associated acute respiratory distress syndrome, while veno-arterial ECMO has been employed in the management of cardiogenic shock and cardiac arrest. Reported survival rates were 72.3% for veno-venous ECMO and 39.0% for veno-arterial ECMO. ECMO has also been used in patients with traumatic brain injury and those undergoing extracorporeal cardiopulmonary resuscitation, although randomized controlled trial data remain limited Major complications include infection, hemorrhage, and thrombosis, which require coordinated prevention and management strategies. Prognostic tools such as the New Injury Severity Score, Simplified Acute Physiology Score III, and Sequential Organ Failure Assessment score are used in clinical evaluation, though trauma-specific models are still lacking.</p><p><strong>Conclusion: </strong>ECMO offers a supportive treatment modality in the management of patients with severe trauma. To improve clinical outcomes, further development of trauma-specific decision tools, multicenter studies, and standardized protocols for anticoagulation and infection control is necessary to support individualized care.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":" ","pages":"4"},"PeriodicalIF":2.5,"publicationDate":"2025-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12763861/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145582147","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Review of risk factors and surgical treatment progress for gallbladder cancer. 胆囊癌的危险因素及手术治疗进展综述。
IF 2.5 3区 生物学 Pub Date : 2025-11-21 DOI: 10.1186/s41065-025-00608-z
Jianguo Feng, Haihong Zhu, Xiaosong Wang

Objective: To systematically review the latest evidence on risk factors and surgical treatment for gallbladder cancer (GBC), with a focus on current controversies and consensus in international guidelines, analyze the application prospects of minimally invasive surgery in advanced GBC, and provide direction for clinical practice and future research.

Methods: Literature on GBC risk factors, molecular mechanisms, and treatment strategies published from 2018 to 2024 was retrieved from databases including PubMed, Web of Science, and CNKI. The retrieved literature was summarized, compared, and critically analyzed.

Results: The pathogenesis of GBC involves a combination of genetic, environmental, and metabolic factors. Beyond gallstones and polyps, mutations in TP53 and ERBB2/ERBB3 genes, metabolic syndrome (obesity, hyperglycemia, hyperlipidemia), and chronic infections (Salmonella, Helicobacter) are significant risk factors. Surgical resection remains the primary curative approach, yet the optimal extent of surgery is debated: Is hepatic resection always necessary for T1b stage? What is the oncological safety of laparoscopic surgery for T2 stage? What is the value of extended resection for T4 stage? Recently, targeted therapies (e.g., against ERBB2, NTRK) and mmune checkpoint inhibitors (anti-PD-1/PD-L1)have shown promise in advanced GBC.

Conclusion: Combating GBC requires a comprehensive strategy encompassing health education, screening of high-risk populations, precise staging, and individualized multimodal treatment. Future research should focus on building molecular subtype-based prognostic models, conducting high-level clinical studies to resolve surgical controversies, and exploring the integration of novel adjuvant therapies with traditional surgery.

目的:系统回顾胆囊癌(GBC)危险因素及手术治疗的最新证据,重点分析目前国际指南的争议和共识,分析微创手术在晚期胆囊癌(GBC)中的应用前景,为临床实践和未来研究提供方向。方法:从PubMed、Web of Science、CNKI等数据库检索2018 - 2024年发表的关于GBC危险因素、分子机制和治疗策略的文献。对检索到的文献进行总结、比较和批判性分析。结果:GBC的发病机制涉及遗传、环境和代谢等多种因素。除了胆结石和息肉外,TP53和ERBB2/ERBB3基因突变、代谢综合征(肥胖、高血糖、高脂血症)和慢性感染(沙门氏菌、幽门螺杆菌)也是重要的危险因素。手术切除仍然是主要的治疗方法,但手术的最佳范围是有争议的:肝切除是否总是必需的T1b期?T2期腹腔镜手术的肿瘤学安全性如何?T4期延长切除的价值是什么?最近,靶向治疗(例如,针对ERBB2, NTRK)和免疫检查点抑制剂(抗pd -1/PD-L1)在晚期GBC中显示出希望。结论:抗击GBC需要一个全面的策略,包括健康教育、筛查高危人群、精确分期和个性化的多模式治疗。未来的研究应着眼于建立基于分子亚型的预后模型,开展高水平的临床研究以解决手术争议,探索新型辅助治疗与传统手术的融合。
{"title":"Review of risk factors and surgical treatment progress for gallbladder cancer.","authors":"Jianguo Feng, Haihong Zhu, Xiaosong Wang","doi":"10.1186/s41065-025-00608-z","DOIUrl":"10.1186/s41065-025-00608-z","url":null,"abstract":"<p><strong>Objective: </strong>To systematically review the latest evidence on risk factors and surgical treatment for gallbladder cancer (GBC), with a focus on current controversies and consensus in international guidelines, analyze the application prospects of minimally invasive surgery in advanced GBC, and provide direction for clinical practice and future research.</p><p><strong>Methods: </strong>Literature on GBC risk factors, molecular mechanisms, and treatment strategies published from 2018 to 2024 was retrieved from databases including PubMed, Web of Science, and CNKI. The retrieved literature was summarized, compared, and critically analyzed.</p><p><strong>Results: </strong>The pathogenesis of GBC involves a combination of genetic, environmental, and metabolic factors. Beyond gallstones and polyps, mutations in TP53 and ERBB2/ERBB3 genes, metabolic syndrome (obesity, hyperglycemia, hyperlipidemia), and chronic infections (Salmonella, Helicobacter) are significant risk factors. Surgical resection remains the primary curative approach, yet the optimal extent of surgery is debated: Is hepatic resection always necessary for T1b stage? What is the oncological safety of laparoscopic surgery for T2 stage? What is the value of extended resection for T4 stage? Recently, targeted therapies (e.g., against ERBB2, NTRK) and mmune checkpoint inhibitors (anti-PD-1/PD-L1)have shown promise in advanced GBC.</p><p><strong>Conclusion: </strong>Combating GBC requires a comprehensive strategy encompassing health education, screening of high-risk populations, precise staging, and individualized multimodal treatment. Future research should focus on building molecular subtype-based prognostic models, conducting high-level clinical studies to resolve surgical controversies, and exploring the integration of novel adjuvant therapies with traditional surgery.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":" ","pages":"240"},"PeriodicalIF":2.5,"publicationDate":"2025-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12750869/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145573377","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
RBM15 mediates m6A methylation modification of FOSB mRNA to promote dysfunction of trophoblast cells-a potential link to preeclampsia. RBM15介导FOSB mRNA的m6A甲基化修饰,促进滋养细胞功能障碍-与子痫前期的潜在联系。
IF 2.5 3区 生物学 Pub Date : 2025-11-21 DOI: 10.1186/s41065-025-00592-4
Yan Li, Fei Li, Qian Gao

Background: N6-methyladenosine (m6A) methylation modification plays an essential role in the molecular pathogenesis of preeclampsia (PE). This study aimed to explore m6A modification in in vitro PE model, involving RNA binding motif protein 15 (RBM15) and FBJ murine osteosarcoma viral oncogene homolog B (FOSB).

Methods: PE was induced by lipopolysaccharide (LPS) in HTR8/SVneo cells. Real-time quantification PCR was used for mRNA detection and Western blotting was used for protein detection. Cell cytokines were examined using enzyme-linked immunosorbent assay. Cell functions were evaluated using EdU assay, flow cytometry, and transwell assay. RNA immunoprecipitation assay and dual-luciferase reporter assay were utilized for validating molecular interaction.

Results: FOSB was highly expressed in placenta tissues from PE patients. Functionally, LPS-induced inflammation, proliferation inhibition, cell apoptosis and migration suppression were significantly abolished following FOSB knockdown. RBM15 upregulated FOSB expression via inducing m6A modification of FOSB mRNA. YTH N6-methyladenosine RNA-binding protein 1 (YTHDF1) acted as an m6A reader protein, and RBM15 enhanced the binding between YTHDF1 and FOSB. RBM15 knockdown relieved LPS-caused trophoblast cell injury by inhibiting FOSB.

Conclusion: These results collectively suggested that RBM15 accelerated trophoblast cell dysfunction via mediating m6A modification of FOSB mRNA through the identification by YTHDF1.

背景:n6 -甲基腺苷(m6A)甲基化修饰在子痫前期(PE)的分子发病机制中起重要作用。本研究旨在探讨m6A在体外PE模型中的修饰,涉及RNA结合基序蛋白15 (RBM15)和FBJ小鼠骨肉瘤病毒癌基因同源物B (FOSB)。方法:采用脂多糖(LPS)诱导HTR8/SVneo细胞发生PE。mRNA检测采用实时荧光定量PCR,蛋白检测采用Western blotting。采用酶联免疫吸附法检测细胞因子。采用EdU法、流式细胞术和transwell法评价细胞功能。利用RNA免疫沉淀法和双荧光素酶报告基因法验证分子间相互作用。结果:FOSB在PE患者胎盘组织中高表达。在功能上,敲除FOSB后,lps诱导的炎症、增殖抑制、细胞凋亡和迁移抑制显著消除。RBM15通过诱导m6A修饰FOSB mRNA而上调FOSB的表达。ythn6 -甲基腺苷rna结合蛋白1 (YTHDF1)作为m6A的解读蛋白,RBM15增强了YTHDF1与FOSB的结合。RBM15基因敲低可通过抑制FOSB减轻lps引起的滋养细胞损伤。结论:这些结果共同提示RBM15通过YTHDF1的鉴定,介导m6A修饰FOSB mRNA,从而加速滋养细胞功能障碍。
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引用次数: 0
Mapping the global research landscape of mitophagy in Parkinson's disease: a bibliometric and visualization analysis. 绘制帕金森病线粒体自噬的全球研究图景:文献计量学和可视化分析。
IF 2.5 3区 生物学 Pub Date : 2025-11-20 DOI: 10.1186/s41065-025-00544-y
Junqiao Zhao, Qian Wang, Yan Cao, Huimin Shan, Shifen Xu

Parkinson's disease (PD) is closely linked to mitochondrial dysfunction and mitophagy, a key mechanism in PD pathogenesis. However, no dedicated bibliometric analysis of mitophagy in PD exists. This study used data from the Web of Science Core Collection to map the global research landscape of mitophagy in PD. The analysis of 1,578 publications (2007-2024) identifies the United States as the most productive country. McGill University ranks as the top institution, and Nobutaka Hattori is the most prolific author. The journal Autophagy is the journal with the highest number of publications in this field. Core research themes included PINK1/Parkin, mitochondrial quality control, α-synuclein, neuroinflammation, and ferroptosis. The study provides insights into the current status of global collaboration and translational progress in this field. Future efforts should aim to further explore new pathways, enhance clinical translation, and promote collaborative partnerships to advance research and address challenges in the field.

帕金森病与线粒体功能障碍和线粒体自噬密切相关,线粒体自噬是帕金森病发病的重要机制。然而,没有专门的文献计量学分析有丝分裂存在。本研究使用来自Web of Science Core Collection的数据来绘制PD中线粒体自噬的全球研究图景。对1578份出版物(2007-2024年)的分析表明,美国是生产率最高的国家。麦吉尔大学排名第一,服部信孝是最多产的作家。自噬(Autophagy)杂志是该领域发表论文最多的杂志。核心研究主题包括PINK1/Parkin、线粒体质量控制、α-突触核蛋白、神经炎症和铁下垂。该研究提供了对该领域全球合作现状和转化进展的见解。未来的努力应旨在进一步探索新的途径,加强临床转化,促进合作伙伴关系,以推进研究和应对该领域的挑战。
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引用次数: 0
The diagnostic value of miR-340-5p in pediatric ulcerative colitis and its molecular mechanism by targeting MAP3K2 to modulate intestinal epithelial cell dysfunction. miR-340-5p在小儿溃疡性结肠炎中的诊断价值及其靶向MAP3K2调控肠上皮细胞功能障碍的分子机制
IF 2.5 3区 生物学 Pub Date : 2025-11-19 DOI: 10.1186/s41065-025-00597-z
Fanting Meng, Xianlong Han, Lingxia Ge, Nan Guan

Background: The incidence of pediatric ulcerative colitis (UC) is increasing yearly, and it is urgent to explore precise diagnostic biomarkers and molecular mechanisms. This study aims to investigate the diagnostic value of miR-340-5p in pediatric UC and its molecular mechanism mediated through targeting MAP3K2.

Methods: Eighty-five pediatric UC patients and 50 healthy controls were enrolled. The expression levels of miR-340-5p and MAP3K2 were detected by qRT-PCR, and Pearson's correlation analysis was conducted. An in vitro model was established by inducing HT-29 cells with dextran sulfate sodium. The target was verified by dual-luciferase assay. Flow cytometry, ELISA, and oxidative stress detection were used to verify the cellular functions regulated by the miR-340-5p/MAP3K2 axis.

Results: In pediatric patients with UC, miR-340-5p was significantly downregulated and negatively correlated with PUCAI, CRP, and ESR (P < 0.0001). Additionally, the diagnostic area of miR-340-5p under the ROC curve was 0.908. Mechanistically, miR-340-5p directly interacts with MAP3K2, leading to suppressed expression of its mRNA and protein. Functional experiments revealed that miR-340-5p overexpression reversed DSS-induced exacerbated cell apoptosis, reduced levels of TNF-α, IL-6, IL-17, IL-1β, and MDA, and increased GSH. Conversely, the beneficial effects of miR-340-5p were attenuated by oe-MAP3K2 overexpression.

Conclusions: miR-340-5p may serve as a diagnostic biomarker for pediatric UC and exerts its effects by targeting MAP3K2 to regulate cell apoptosis, inflammatory responses, and oxidative stress.

背景:儿童溃疡性结肠炎(UC)的发病率逐年上升,迫切需要探索准确的诊断生物标志物和分子机制。本研究旨在探讨miR-340-5p在儿童UC中的诊断价值及其靶向MAP3K2介导的分子机制。方法:85例儿童UC患者和50名健康对照者入组。采用qRT-PCR检测miR-340-5p和MAP3K2的表达水平,并进行Pearson相关分析。用硫酸葡聚糖钠诱导HT-29细胞建立体外模型。用双荧光素酶法对目标进行了验证。采用流式细胞术、ELISA和氧化应激检测验证miR-340-5p/MAP3K2轴调控的细胞功能。结果:在儿童UC患者中,miR-340-5p显著下调,并与PUCAI、CRP和ESR呈负相关(P)。结论:miR-340-5p可能作为儿童UC的诊断性生物标志物,通过靶向MAP3K2调控细胞凋亡、炎症反应和氧化应激发挥作用。
{"title":"The diagnostic value of miR-340-5p in pediatric ulcerative colitis and its molecular mechanism by targeting MAP3K2 to modulate intestinal epithelial cell dysfunction.","authors":"Fanting Meng, Xianlong Han, Lingxia Ge, Nan Guan","doi":"10.1186/s41065-025-00597-z","DOIUrl":"10.1186/s41065-025-00597-z","url":null,"abstract":"<p><strong>Background: </strong>The incidence of pediatric ulcerative colitis (UC) is increasing yearly, and it is urgent to explore precise diagnostic biomarkers and molecular mechanisms. This study aims to investigate the diagnostic value of miR-340-5p in pediatric UC and its molecular mechanism mediated through targeting MAP3K2.</p><p><strong>Methods: </strong>Eighty-five pediatric UC patients and 50 healthy controls were enrolled. The expression levels of miR-340-5p and MAP3K2 were detected by qRT-PCR, and Pearson's correlation analysis was conducted. An in vitro model was established by inducing HT-29 cells with dextran sulfate sodium. The target was verified by dual-luciferase assay. Flow cytometry, ELISA, and oxidative stress detection were used to verify the cellular functions regulated by the miR-340-5p/MAP3K2 axis.</p><p><strong>Results: </strong>In pediatric patients with UC, miR-340-5p was significantly downregulated and negatively correlated with PUCAI, CRP, and ESR (P < 0.0001). Additionally, the diagnostic area of miR-340-5p under the ROC curve was 0.908. Mechanistically, miR-340-5p directly interacts with MAP3K2, leading to suppressed expression of its mRNA and protein. Functional experiments revealed that miR-340-5p overexpression reversed DSS-induced exacerbated cell apoptosis, reduced levels of TNF-α, IL-6, IL-17, IL-1β, and MDA, and increased GSH. Conversely, the beneficial effects of miR-340-5p were attenuated by oe-MAP3K2 overexpression.</p><p><strong>Conclusions: </strong>miR-340-5p may serve as a diagnostic biomarker for pediatric UC and exerts its effects by targeting MAP3K2 to regulate cell apoptosis, inflammatory responses, and oxidative stress.</p>","PeriodicalId":12862,"journal":{"name":"Hereditas","volume":"162 1","pages":"229"},"PeriodicalIF":2.5,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12628879/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145548730","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Shengjiang Powder alleviates oxidative stress damage and fibrosis in mice with atherosclerosis concurrent with non-alcoholic fatty liver disease. 生姜散减轻动脉粥样硬化合并非酒精性脂肪肝小鼠氧化应激损伤及纤维化。
IF 2.5 3区 生物学 Pub Date : 2025-11-12 DOI: 10.1186/s41065-025-00598-y
Jia He, Bingjiu Lu, Yan Zhang, Jingran Sun, Bo Fu, Tianqing Wang

Objective: To investigate the effects of "Shengjiang Powder", a representative formula for "simultaneous treatment of liver and heart," on liver tissue inflammation and fibrosis in mice with atherosclerosis(AS) concurrent with non-alcoholic fatty liver disease (NAFLD).

Methods: Ten wild-type male C57/B6J mice were assigned to the control group, and 40 ApoE -/- mouse were randomly divided into the model group, atorvastatin group, and traditional Chinese medicine (TCM) treatment groups. The model group, atorvastatin group, and TCM treatment groups were fed a high-fat Western diet for 12 weeks. Atorvastatin and TCM groups were administered via gavage, while the control group and model group received sterile purified water via gavage for 12 weeks. Serum levels of ALT, AST, TRIG, TC, LDL, as well as liver tissue levels of SOD, MDA, and GSH were measured. HE staining was used to evaluate liver tissue morphology and inflammatory infiltration. Western blot was used to detect the effect of Shengjiang Powder on the activation of AMPK/mTOR signaling pathway. Network pharmacology analysis was performed beforehand to identify potential targets of Shengjiang Powder in regulating fatty liver and atherosclerosis, with AMPK identified as a key target.

Results: Compared with the model group, the Shengjiang Powder treatment reduced serum levels of TRIG, TC, and LDL (P < 0.05), increased liver SOD and GSH activity (P < 0.01), decreased MDA (P < 0.01), alleviated liver steatosis, reduces the area of aortic sinus plaques, improved hepatic steatosis and inflammation, inhibited the expression of inflammatory factors and activated the AMPK/mTOR signaling pathway, consistent with the network pharmacology prediction that AMPK is a critical regulatory target.

Conclusion: Treatment with "Shengjiang Powder," a representative formula for "simultaneous treatment of liver and heart," can slow the progression of atherosclerosis and concurrent NAFLD. The dosage shows a positive correlation with efficacy, and this effect is related to the regulation of liver oxidative stress and inflammation-induced fibrosis pathways.

目的:探讨“肝心并治”的代表性方剂“生姜散”对动脉粥样硬化(AS)合并非酒精性脂肪性肝病(NAFLD)小鼠肝组织炎症及纤维化的影响。方法:将10只野生型雄性C57/B6J小鼠作为对照组,40只ApoE -/-小鼠随机分为模型组、阿托伐他汀组和中药治疗组。模型组、阿托伐他汀组和中药治疗组大鼠均饲喂高脂西餐12周。阿托伐他汀组和中药组灌胃,对照组和模型组灌胃无菌纯净水,持续12周。测定血清ALT、AST、TRIG、TC、LDL水平及肝组织SOD、MDA、GSH水平。HE染色观察肝组织形态及炎症浸润情况。Western blot检测升江散对AMPK/mTOR信号通路激活的影响。事先进行网络药理学分析,确定升姜散调节脂肪肝和动脉粥样硬化的潜在靶点,确定AMPK为关键靶点。结果:与模型组比较,生姜散治疗大鼠血清TRIG、TC、LDL水平明显降低(P)。结论:“肝心并治”的代表方“生姜散”治疗可减缓动脉粥样硬化及并发NAFLD的进展。剂量与疗效呈正相关,这种作用与调节肝脏氧化应激和炎症性纤维化通路有关。
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Hereditas
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