Pub Date : 2024-08-07DOI: 10.1007/s13580-024-00616-4
Ramandeep Singh Sidhu, Sally A. Bound, Ian Hunt, Nigel D. Swarts
The ethylene inhibitor 1-methylcyclopropene (1-MCP) is widely used in the apple industry as a post-harvest fumigation application to slow down the ripening process and maintain fruit quality during storage. With the development of a sprayable formulation (Harvista™, Agrofresh Inc, USA), it is becoming increasingly common in the apple industry to apply 1-MCP as a pre-harvest spray. This study investigated the impact of pre-harvest 1-MCP applied 1 week prior to harvest as a foliar application at 11.4 L ha−1 in 1000 L water, on the quality and respiration rate of ‘Scilate’ apples grown in the Huon Valley, Southern Tasmania, Australia. Two trials were undertaken, trial 1 examined fruit quality, flesh browning (FB) and fruit softening in 1-MCP treated and untreated fruit while trial 2 compared the respiration rate of 1-MCP treated and untreated fruit. Despite no effect on fresh fruit quality attributes, pre-harvest spray application of 1-MCP influenced post-harvest fruit quality, storability, and respiration rate of apples. Fruit treated with 1-MCP showed higher malic acid concentration (1.2 g L−1 vs 0.9 g L−1) and lower juice pH (4.6 vs 4.9) even after 7.5 months of regular air cold-storage along with a six-fold reduction in fruit softening in comparison to untreated fruit (2% vs 13%). Pre-harvest treatment of 1-MCP reduced respiration rate by 32%, and incidence of CO2 injury by over 40%. The incidence of radial type (senescent related) FB was reduced by 100%. A significant proportion of treated apples still suffered from severe CO2 injury. This study has demonstrated that pre-harvest application of 1-MCP to ‘Scilate’ fruit can be useful in maintaining long-term fruit quality during storage, reducing respiration rate, and lowering the incidence of FB in general. However, the risk of severe CO2 injury remains, especially with larger fruit harvested from trees with lighter crop loads.
{"title":"Impact of pre-harvest application of 1-methylcyclopropene (1-MCP) on fruit quality, physiological disorders and respiration rate of ‘Scilate’ apple","authors":"Ramandeep Singh Sidhu, Sally A. Bound, Ian Hunt, Nigel D. Swarts","doi":"10.1007/s13580-024-00616-4","DOIUrl":"https://doi.org/10.1007/s13580-024-00616-4","url":null,"abstract":"<p>The ethylene inhibitor 1-methylcyclopropene (1-MCP) is widely used in the apple industry as a post-harvest fumigation application to slow down the ripening process and maintain fruit quality during storage. With the development of a sprayable formulation (Harvista™, Agrofresh Inc, USA), it is becoming increasingly common in the apple industry to apply 1-MCP as a pre-harvest spray. This study investigated the impact of pre-harvest 1-MCP applied 1 week prior to harvest as a foliar application at 11.4 L ha<sup>−1</sup> in 1000 L water, on the quality and respiration rate of ‘Scilate’ apples grown in the Huon Valley, Southern Tasmania, Australia. Two trials were undertaken, trial 1 examined fruit quality, flesh browning (FB) and fruit softening in 1-MCP treated and untreated fruit while trial 2 compared the respiration rate of 1-MCP treated and untreated fruit. Despite no effect on fresh fruit quality attributes, pre-harvest spray application of 1-MCP influenced post-harvest fruit quality, storability, and respiration rate of apples. Fruit treated with 1-MCP showed higher malic acid concentration (1.2 g L<sup>−1</sup> vs 0.9 g L<sup>−1</sup>) and lower juice pH (4.6 vs 4.9) even after 7.5 months of regular air cold-storage along with a six-fold reduction in fruit softening in comparison to untreated fruit (2% vs 13%). Pre-harvest treatment of 1-MCP reduced respiration rate by 32%, and incidence of CO<sub>2</sub> injury by over 40%. The incidence of radial type (senescent related) FB was reduced by 100%. A significant proportion of treated apples still suffered from severe CO<sub>2</sub> injury. This study has demonstrated that pre-harvest application of 1-MCP to ‘Scilate’ fruit can be useful in maintaining long-term fruit quality during storage, reducing respiration rate, and lowering the incidence of FB in general. However, the risk of severe CO<sub>2</sub> injury remains, especially with larger fruit harvested from trees with lighter crop loads.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-08-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141937962","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-08-05DOI: 10.1007/s13580-024-00629-z
SeongHwa Bak, Tae-Ho Han
Hydrangeas with large inflorescences are widely used as cut flowers and in floral arrangements. However, the genetic diversity of commercially grown hydrangeas has been limited owing to the breeding focus on popular species. Therefore, this study was conducted to suggest interspecific breeding strategies for expanding the genetic diversity in Hydrangea L. by evaluating genetic diversity in the seven main species collected in Korea and analyzing cross compatibility via intra- and interspecific hybridization. Interspecific diversity evaluation using simple sequence repeat markers resulted in the segregation of 35 varieties accounting for seven species into five groups as follows: (1) Hydrangea paniculate group, (2) Hydrangea arborescnes group, (3) Hydrangea anomala and Hydrangea aspera group, (4) Hydrangea quercifolia group, and (5) Hydrangea macrophylla and Hydrangea serrata group. Cross compatibility was confirmed via intra- and interspecific crossing, and hybrids were obtained in 18 crossing combinations. Intraspecific hybrids tend to be easy to obtain, but interspecific hybrids are difficult to obtain due to a variety of factors. While most of the interspecific hybrids were obtained using ovule culture, the crossing between H. macrophylla and H. serrata created hybrids from seed sowing, indicating that H. serrata is a subspecies of H. macrophylla. Bilateral and unilateral incompatibilities were observed across the obtained hybrids. Particularly, weak bilateral compatibility was observed between H. serrata and H.paniculata. Accordingly, it was proposed that hybrids between H. macrophylla and H. serrata can be successfully used as parental materials in crossing with H. paniculata to improve cold tolerance. In addition, cross compatibility was improved in interspecific crossing using H. macrophylla and H. arborescens as maternal plants. It is anticipated that these finding will help improve the genetic diversity in commercial hydrangeas.
具有大型花序的绣球花被广泛用作切花和插花。然而,由于育种重点集中在流行品种上,商业种植绣球花的遗传多样性一直很有限。因此,本研究通过评估在韩国收集的七个主要品种的遗传多样性,并通过种内和种间杂交分析杂交相容性,提出了扩大绣球花遗传多样性的种间育种策略。利用简单序列重复标记进行的种间多样性评估将 7 个物种的 35 个品种分成以下 5 组:通过种内和种间杂交确认了杂交相容性,并在 18 个杂交组合中获得了杂交种。种内杂交往往容易获得,但种间杂交由于各种因素很难获得。虽然大多数种间杂交种都是通过胚珠培养获得的,但大叶黄杨(H. macrophylla)和大叶黄杨(H. serrata)之间的杂交从种子播种开始就产生了杂交种,这表明大叶黄杨(H. serrata)是大叶黄杨(H. macrophylla)的一个亚种。在获得的杂交种中观察到了双边和单边不亲和现象。特别是在 H. serrata 和 H.paniculata 之间观察到较弱的双边相容性。因此,研究人员提出,H. macrophylla 和 H. serrata 之间的杂交种可成功用作与 H. paniculata 杂交的亲本材料,以提高耐寒性。此外,以 H. macrophylla 和 H. arborescens 为母本的种间杂交也提高了杂交相容性。预计这些发现将有助于提高商业绣球花的遗传多样性。
{"title":"Evaluation of genetic diversity using simple sequence repeat markers and analysis of cross compatibility in hydrangeas","authors":"SeongHwa Bak, Tae-Ho Han","doi":"10.1007/s13580-024-00629-z","DOIUrl":"https://doi.org/10.1007/s13580-024-00629-z","url":null,"abstract":"<p>Hydrangeas with large inflorescences are widely used as cut flowers and in floral arrangements. However, the genetic diversity of commercially grown hydrangeas has been limited owing to the breeding focus on popular species. Therefore, this study was conducted to suggest interspecific breeding strategies for expanding the genetic diversity in <i>Hydrangea L</i>. by evaluating genetic diversity in the seven main species collected in Korea and analyzing cross compatibility via intra- and interspecific hybridization. Interspecific diversity evaluation using simple sequence repeat markers resulted in the segregation of 35 varieties accounting for seven species into five groups as follows: (1) <i>Hydrangea paniculate</i> group, (2) <i>Hydrangea arborescnes</i> group, (3) <i>Hydrangea anomala</i> and <i>Hydrangea aspera</i> group, (4) <i>Hydrangea quercifolia</i> group, and (5) <i>Hydrangea macrophylla</i> and <i>Hydrangea serrata</i> group. Cross compatibility was confirmed via intra- and interspecific crossing, and hybrids were obtained in 18 crossing combinations. Intraspecific hybrids tend to be easy to obtain, but interspecific hybrids are difficult to obtain due to a variety of factors. While most of the interspecific hybrids were obtained using ovule culture, the crossing between <i>H. macrophylla</i> and <i>H. serrata</i> created hybrids from seed sowing, indicating that <i>H. serrata</i> is a subspecies of <i>H. macrophylla</i>. Bilateral and unilateral incompatibilities were observed across the obtained hybrids. Particularly, weak bilateral compatibility was observed between <i>H. serrata</i> and <i>H.paniculata</i>. Accordingly, it was proposed that hybrids between <i>H. macrophylla</i> and <i>H. serrata</i> can be successfully used as parental materials in crossing with <i>H. paniculata</i> to improve cold tolerance. In addition, cross compatibility was improved in interspecific crossing using <i>H. macrophylla</i> and <i>H. arborescens</i> as maternal plants. It is anticipated that these finding will help improve the genetic diversity in commercial hydrangeas.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141937963","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-07-19DOI: 10.1007/s13580-024-00628-0
Yea Ji Lim, Myeong Ja Kwak, Jongkyu Lee, Dawon Kang, Sun Mi Je, Su Young Woo
Ozone (O3) absorption through leaf stomata disrupts plant physiological processes, prompting various defense mechanisms to mitigate O3-induced harm. This study measured parameters including cell structure, gas exchange, carbon assimilation, lipid peroxidation, and biogenic volatile organic compounds (BVOCs) emissions to evaluate the physiological impact of Prunus × yedoensis under elevated ozone (E-O3) exposure. The seedlings exhibited a slight stimulatory effect during the early phases of E–O3 exposure; however, E–O3 beyond a specific threshold significantly and negatively affected photosynthetic parameters, pigment content, and potential antioxidant capacity, and E–O3 was significantly correlated with the BVOCs emission rate. After three weeks of E–O3 exposure, no significant differences were observed in leaf stomatal appearance in the field emission scanning electron microscopy results, but according to the results of leaf mesophyll cell ultrastructure, grana degradation, membrane decomposition, cell wall thickening, wart–like protrusion formation, and increased plastoglobulus density within the chloroplasts were observed. Chlorophyll content significantly decreased by 38.71%, and solute leakage increased by 20.57% in the E–O3 group. The net photosynthetic rate was almost two times lower with E–O3. In contrast, there were no significant differences in stomatal conductance. In conclusion, E–O3 can induce a hormetic stimulatory effect during the early exposure phase. However, when the critical threshold is exceeded, O3 adversely affects the physiology of P. × yedoensis seedlings. Therefore, E–O3 is a harmful air pollutant that hinders the growth of woody plants, and urban trees require the continuous management of O3 phytotoxicity.
{"title":"Korean flowering cherry (Prunus × yedoensis Matsum.) response to elevated ozone: physiological traits and biogenic volatile organic compounds emission","authors":"Yea Ji Lim, Myeong Ja Kwak, Jongkyu Lee, Dawon Kang, Sun Mi Je, Su Young Woo","doi":"10.1007/s13580-024-00628-0","DOIUrl":"https://doi.org/10.1007/s13580-024-00628-0","url":null,"abstract":"<p>Ozone (O<sub>3</sub>) absorption through leaf stomata disrupts plant physiological processes, prompting various defense mechanisms to mitigate O<sub>3</sub>-induced harm. This study measured parameters including cell structure, gas exchange, carbon assimilation, lipid peroxidation, and biogenic volatile organic compounds (BVOCs) emissions to evaluate the physiological impact of <i>Prunus × yedoensis</i> under elevated ozone (E-O<sub>3</sub>) exposure. The seedlings exhibited a slight stimulatory effect during the early phases of E–O<sub>3</sub> exposure; however, E–O<sub>3</sub> beyond a specific threshold significantly and negatively affected photosynthetic parameters, pigment content, and potential antioxidant capacity, and E–O<sub>3</sub> was significantly correlated with the BVOCs emission rate. After three weeks of E–O<sub>3</sub> exposure, no significant differences were observed in leaf stomatal appearance in the field emission scanning electron microscopy results, but according to the results of leaf mesophyll cell ultrastructure, grana degradation, membrane decomposition, cell wall thickening, wart–like protrusion formation, and increased plastoglobulus density within the chloroplasts were observed. Chlorophyll content significantly decreased by 38.71%, and solute leakage increased by 20.57% in the E–O<sub>3</sub> group. The net photosynthetic rate was almost two times lower with E–O<sub>3</sub>. In contrast, there were no significant differences in stomatal conductance. In conclusion, E–O<sub>3</sub> can induce a hormetic stimulatory effect during the early exposure phase. However, when the critical threshold is exceeded, O<sub>3</sub> adversely affects the physiology of <i>P. × yedoensis</i> seedlings. Therefore, E–O<sub>3</sub> is a harmful air pollutant that hinders the growth of woody plants, and urban trees require the continuous management of O<sub>3</sub> phytotoxicity.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-07-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141742306","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-06-28DOI: 10.1007/s13580-024-00626-2
Yu-Jin Kim, Kyungtae Park, Bo-Kook Jang, Sung Pil Kwon, Ju-Sung Cho
Reynoutria sachalinensis is an herbaceous plant that has gained attention as a promising functional ingredient in bio-health. However, information on the propagation of this plant remains limited, and information on the germination and dormancy characteristics of R. sachalinensis seeds native to Korea is yet to be established. This study aimed to determine the optimal method for breaking dormancy by classifying the dormancy types in R. sachalinensis seeds collected from Ulleungdo. Initial observations revealed that R. sachalinensis seeds exhibited water permeability and fully developed embryos. However, further investigation into seed dormancy was warranted due to the low germination percentage of less than 20%. To address this dormancy, a cold stratification treatment lasting four weeks was employed, which confirmed the presence of physiological dormancy (PD) in R. sachalinensis seeds. Additionally, prolonged after-ripening, without any special treatment, led to the loss of dormancy. Both treatments demonstrated that the dormancy of R. sachalinensis seeds could be overcome by alternative methods for non-germinated seeds. Accordingly, scarification was used to treat seeds whose dormancy was broken by after-ripening, and all viable seeds germinated. Therefore, it is assumed that R. sachalinensis seeds have two types of PD—non-deep and intermediate, exhibiting polymorphism as an adaptive strategy to thrive in challenging environments. Through this study, the scope of industrial use can be expanded based on stable and uniform seedling production by establishing conditions that efficiently break dormancy in R. sachalinensisseeds that exhibit polymorphism.
Reynoutria sachalinensis 是一种草本植物,作为一种很有前景的生物保健功能成分而备受关注。然而,有关该植物繁殖的信息仍然有限,有关原产于韩国的 R. sachalinensis 种子的发芽和休眠特性的信息也尚未建立。本研究旨在通过对郁陵岛采集的 R. sachalinensis 种子的休眠类型进行分类,确定打破休眠的最佳方法。初步观察表明,R. sachalinensis 种子具有透水性和发育完全的胚。然而,由于发芽率低于 20%,因此有必要对种子休眠进行进一步研究。为了解决种子休眠问题,研究人员采用了为期四周的低温冷藏处理,结果证实 R. sachalinensis 种子存在生理休眠(PD)。此外,在没有任何特殊处理的情况下,延长后熟时间也会导致休眠消失。这两种处理方法都表明,对于未发芽的 R. sachalinensis 种子,可采用其他方法克服休眠。因此,用去痕法处理因后熟而打破休眠的种子,所有有活力的种子都发芽了。因此,可以推测 R. sachalinensis 种子具有两种类型的 PD--非深度和中间型,表现出多态性,是在挑战性环境中茁壮成长的一种适应策略。通过这项研究,可以在稳定和均匀育苗的基础上扩大工业应用范围,建立有效打破 R. sachalinensis 种子休眠的条件,使其表现出多态性。
{"title":"Classification of dormancy types and breakout conditions in Reynoutria sachalinensis exhibiting seed dormancy polymorphism","authors":"Yu-Jin Kim, Kyungtae Park, Bo-Kook Jang, Sung Pil Kwon, Ju-Sung Cho","doi":"10.1007/s13580-024-00626-2","DOIUrl":"https://doi.org/10.1007/s13580-024-00626-2","url":null,"abstract":"<p><i>Reynoutria sachalinensis</i> is an herbaceous plant that has gained attention as a promising functional ingredient in bio-health. However, information on the propagation of this plant remains limited, and information on the germination and dormancy characteristics of <i>R. sachalinensis</i> seeds native to Korea is yet to be established. This study aimed to determine the optimal method for breaking dormancy by classifying the dormancy types in <i>R. sachalinensis</i> seeds collected from Ulleungdo. Initial observations revealed that <i>R. sachalinensis</i> seeds exhibited water permeability and fully developed embryos. However, further investigation into seed dormancy was warranted due to the low germination percentage of less than 20%. To address this dormancy, a cold stratification treatment lasting four weeks was employed, which confirmed the presence of physiological dormancy (PD) in <i>R. sachalinensis</i> seeds. Additionally, prolonged after-ripening, without any special treatment, led to the loss of dormancy. Both treatments demonstrated that the dormancy of <i>R. sachalinensis</i> seeds could be overcome by alternative methods for non-germinated seeds. Accordingly, scarification was used to treat seeds whose dormancy was broken by after-ripening, and all viable seeds germinated. Therefore, it is assumed that <i>R. sachalinensis</i> seeds have two types of PD—non-deep and intermediate, exhibiting polymorphism as an adaptive strategy to thrive in challenging environments. Through this study, the scope of industrial use can be expanded based on stable and uniform seedling production by establishing conditions that efficiently break dormancy in <i>R. sachalinensis</i>seeds that exhibit polymorphism.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141507606","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Interspecific hybridization in the genus Rosa (Rosaceae) is a common natural phenomenon. Hybrids often exhibit heterosis and new combinations of traits, which can provide raw materials for horticultural breeding. DNA barcodes and microsatellites have been proposed to facilitate species discrimination and hybrid detection. However, most SSR markers developed for roses have been found unapplicable to Rosa sect. Synstylae because of null alleles or failed amplification. In this study, we designed 15 pairs of microsatellite primers, along with four previously developed primers specifically for Rosa sect. Synstylae; we then analyzed 174 individuals of three closely related and sympatrically distributed Rosa species as a test case to evaluate the consistency between morphological and genetic hybrid identifications and to compare the discrimination efficiency of the DNA barcodes versus SSRs in detecting admixture. Principle coordinate analysis identified several individuals with intermediate phenotypes among the three rose species. Hybridization, intraspecific morphological polymorphism, and sample collection at different growth stages or phenological phases may have hindered species identification based on morphology and distorted the morphological clustering results. The molecular analyses showed that 12 (6.8%), 13 (7.4%), and 15 (8.6%) individuals were identified as admixed by STRUCTURE, NewHybrids, and nrITS sequences, respectively, of which only seven hybrids showed signs of admixture across all three methods. About 81% of the morphologically identifiable hybrids exhibited admixture based on SSRs. Meanwhile, approximately 69% of morphologically identifiable hybrids were detected, but four morphologically pure species individuals were identified as genetically admixed based on nrITS sequences. Some morphologically pure species individuals were genetically identified as hybrids while some morphological hybrids were identified as pure individuals based on certain molecular markers. Overall, EST-SSRs discriminated morphological hybrids more accurately than nrITS. We inferred that there is ongoing interspecific gene exchange among the three wild Rosa species that obscures morphospecies boundaries. Combining multiple data types and analytical approaches offers powerful utility for hybrid detection, regardless of the level of hybridization.
蔷薇(蔷薇科)种间杂交是一种常见的自然现象。杂交种往往表现出异质性和新的性状组合,可为园艺育种提供原材料。DNA 条形码和微卫星已被提出用于促进物种鉴别和杂交种检测。然而,大多数为玫瑰开发的 SSR 标记都发现不适用于蔷薇科。然而,由于等位基因无效或扩增失败,大多数为玫瑰开发的 SSR 标记都不适用于蔷薇科。在本研究中,我们设计了 15 对微卫星引物,以及之前开发的 4 个专门用于蔷薇科的引物。然后,我们分析了三个亲缘关系密切且同域分布的蔷薇物种的 174 个个体,以评估形态学和遗传学杂交鉴定的一致性,并比较 DNA 条形码和 SSR 在检测混交方面的鉴别效率。主坐标分析确定了三个蔷薇物种中具有中间表型的几个个体。杂交、种内形态多态性以及在不同生长阶段或物候期采集样本可能会阻碍根据形态鉴定物种,并扭曲形态聚类结果。分子分析表明,通过 STRUCTURE、NewHybrids 和 nrITS 序列鉴定的混交个体分别为 12 个(6.8%)、13 个(7.4%)和 15 个(8.6%),其中只有 7 个混交个体在三种方法中都有混交迹象。根据 SSR,约 81% 在形态上可识别的杂交种表现出混交。同时,根据 nrITS 序列,约 69% 的形态学上可识别的杂交种被检测到,但有 4 个形态学上的纯种个体被鉴定为基因掺杂。一些形态学上的纯种个体在遗传学上被鉴定为杂交种,而一些形态学上的杂交种则根据某些分子标记被鉴定为纯种个体。总体而言,EST-SSRs 对形态杂交种的鉴别比 nrITS 更准确。我们推断,三个野生蔷薇物种之间正在进行种间基因交换,从而模糊了形态种的界限。无论杂交程度如何,结合多种数据类型和分析方法都能为杂交检测提供强大的效用。
{"title":"Morphology-based genetic diversity analysis reveals introgressive hybridizations obscure species boundaries of three wild roses endemic to Taiwan Island","authors":"Cheng Zhang, Shi-Qi Li, Liang-Ying Li, Xin-Fen Gao","doi":"10.1007/s13580-024-00619-1","DOIUrl":"https://doi.org/10.1007/s13580-024-00619-1","url":null,"abstract":"<p>Interspecific hybridization in the genus <i>Rosa</i> (Rosaceae) is a common natural phenomenon. Hybrids often exhibit heterosis and new combinations of traits, which can provide raw materials for horticultural breeding. DNA barcodes and microsatellites have been proposed to facilitate species discrimination and hybrid detection. However, most SSR markers developed for roses have been found unapplicable to <i>Rosa</i> sect. <i>Synstylae</i> because of null alleles or failed amplification. In this study, we designed 15 pairs of microsatellite primers, along with four previously developed primers specifically for <i>Rosa</i> sect. <i>Synstylae</i>; we then analyzed 174 individuals of three closely related and sympatrically distributed <i>Rosa</i> species as a test case to evaluate the consistency between morphological and genetic hybrid identifications and to compare the discrimination efficiency of the DNA barcodes versus SSRs in detecting admixture. Principle coordinate analysis identified several individuals with intermediate phenotypes among the three rose species. Hybridization, intraspecific morphological polymorphism, and sample collection at different growth stages or phenological phases may have hindered species identification based on morphology and distorted the morphological clustering results. The molecular analyses showed that 12 (6.8%), 13 (7.4%), and 15 (8.6%) individuals were identified as admixed by STRUCTURE, NewHybrids, and nr<i>ITS</i> sequences, respectively, of which only seven hybrids showed signs of admixture across all three methods. About 81% of the morphologically identifiable hybrids exhibited admixture based on SSRs. Meanwhile, approximately 69% of morphologically identifiable hybrids were detected, but four morphologically pure species individuals were identified as genetically admixed based on nr<i>ITS</i> sequences. Some morphologically pure species individuals were genetically identified as hybrids while some morphological hybrids were identified as pure individuals based on certain molecular markers. Overall, EST-SSRs discriminated morphological hybrids more accurately than nr<i>ITS</i>. We inferred that there is ongoing interspecific gene exchange among the three wild <i>Rosa</i> species that obscures morphospecies boundaries. Combining multiple data types and analytical approaches offers powerful utility for hybrid detection, regardless of the level of hybridization.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-06-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141507607","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-29DOI: 10.1007/s13580-024-00624-4
WooChul Ju, Sung Jin Park, Min Jung Lee, Sung Hee Park, Sung Gi Min, Kang-Mo Ku
Kimchi cabbage, a staple in South Korean cuisine, exhibits taste variations depending on the season of cultivation, with significant implications for kimchi production quality. In this study, we conducted comprehensive metabolomic analyses of kimchi cabbage grown in diverse environments throughout the year. We identified 15 primary metabolites, 10 glucosinolates, and 12 hydrolysates, providing valuable insights into the metabolic composition of kimchi cabbage. Using this data, we developed predictive models for taste and quality differentiation in kimchi cabbage based on the season of cultivation. Three regression models, including Orthogonal Partial Least Squares regression (OPLS), Partial Least Squares (PLS) regression, and Random Forest regression, were employed to predict seasonal variation. The models exhibited high accuracy, with R2 values ranging from 0.77 to 0.95, indicating their potential for distinguishing seasonal differences. Notably, hydroxyglucobrassicin, 5-oxoproline, and inositol consistently emerged as significant metabolites across all models. Additionally, we developed regression models for predicting sweetness and bitterness in kimchi cabbage. Metabolites such as malic acid, fructose, and glucose were positively correlated with sweetness, while neoglucobrassicin and glucobrassicin were negatively correlated. Conversely, metabolites like glucoerucin and glucobrassicin were positively correlated with bitterness, while malic acid and sucrose were negatively correlated. These findings provide a valuable foundation for understanding the metabolic basis of taste variation in kimchi cabbage and offer practical applications for improving kimchi production quality. By incorporating more varieties and multi-year data, future research aims to develop even more accurate predictive models for kimchi cabbage taste and quality, ultimately contributing to the consistency of kimchi production.
{"title":"Seasonal variation of metabolites in Kimchi cabbage: utilizing metabolomics based machine learning for cultivation season and taste discrimination","authors":"WooChul Ju, Sung Jin Park, Min Jung Lee, Sung Hee Park, Sung Gi Min, Kang-Mo Ku","doi":"10.1007/s13580-024-00624-4","DOIUrl":"https://doi.org/10.1007/s13580-024-00624-4","url":null,"abstract":"<p>Kimchi cabbage, a staple in South Korean cuisine, exhibits taste variations depending on the season of cultivation, with significant implications for kimchi production quality. In this study, we conducted comprehensive metabolomic analyses of kimchi cabbage grown in diverse environments throughout the year. We identified 15 primary metabolites, 10 glucosinolates, and 12 hydrolysates, providing valuable insights into the metabolic composition of kimchi cabbage. Using this data, we developed predictive models for taste and quality differentiation in kimchi cabbage based on the season of cultivation. Three regression models, including Orthogonal Partial Least Squares regression (OPLS), Partial Least Squares (PLS) regression, and Random Forest regression, were employed to predict seasonal variation. The models exhibited high accuracy, with R<sup>2</sup> values ranging from 0.77 to 0.95, indicating their potential for distinguishing seasonal differences. Notably, hydroxyglucobrassicin, 5-oxoproline, and inositol consistently emerged as significant metabolites across all models. Additionally, we developed regression models for predicting sweetness and bitterness in kimchi cabbage. Metabolites such as malic acid, fructose, and glucose were positively correlated with sweetness, while neoglucobrassicin and glucobrassicin were negatively correlated. Conversely, metabolites like glucoerucin and glucobrassicin were positively correlated with bitterness, while malic acid and sucrose were negatively correlated. These findings provide a valuable foundation for understanding the metabolic basis of taste variation in kimchi cabbage and offer practical applications for improving kimchi production quality. By incorporating more varieties and multi-year data, future research aims to develop even more accurate predictive models for kimchi cabbage taste and quality, ultimately contributing to the consistency of kimchi production.</p><h3 data-test=\"abstract-sub-heading\">Graphical Abstract</h3>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141165524","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-07DOI: 10.1007/s13580-024-00600-y
Jing Feng, Ziyan Lin, Kun Wang, Peipei Wu, Sihong Zhou
BMI1 is the main component of the Polycomb Group Complex 1 (PRC1), which functions as an important epigenetic inhibitor of various regulatory genes associated with shoot apical meristem, embryonic development, flowering, senescence and so on. However, its role in the regulation of grapevine development is still unclear. In order to explore the function of VvBMI1a gene in the regulation of flowering in Vitis vinifera ‘Cabernet Sauvignon’, the subcellular localization, expression pattern, yeast two-hybrid, two-molecule fluorescence complementation and flowering time of transgenic Arabidopsis were analyzed. The results showed that VvBMI1a, a member of RING domain-containing proteins family from grapevine (Vitis vinifera), is involved in controlling plant flowering time. Expression of VvBMI1a was abundant in the shoot tips and inflorescence meristems of grapevine. VvBMI1a protein is localized in the nucleus. VvBMI1a could interact with VvRING1a protein which belonged to PRC1. Phenotypic analysis showed that VvBMI1a over-expression lines had earlier flowering time than wild-type plants under long-day (LD) conditions. Further analysis by qRT-PCR and transcriptome suggests that both the suppression of FLC and activation of FT, SOC1, SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 5 (SPL5), AGL8 were observed in VvBMI1a-overexpressing lines, resulting in early flowering. Our results provide the evidence demonstrating the effectiveness of manipulating VvBMI1a to alter the flowering time of plants. In a word, ectopic overexpression of VvBMI1a inhibited the expression of FLC, activated the expression of FT, SPL5, AGL8 to alter the flowering time of Arabidopsis plants.
{"title":"Ectopic expression of an AtBMI1a homolog from Vitis vinifera accelerates flowering time in transgenic Arabidopsis","authors":"Jing Feng, Ziyan Lin, Kun Wang, Peipei Wu, Sihong Zhou","doi":"10.1007/s13580-024-00600-y","DOIUrl":"https://doi.org/10.1007/s13580-024-00600-y","url":null,"abstract":"<p>BMI1 is the main component of the Polycomb Group Complex 1 (PRC1), which functions as an important epigenetic inhibitor of various regulatory genes associated with shoot apical meristem, embryonic development, flowering, senescence and so on. However, its role in the regulation of grapevine development is still unclear. In order to explore the function of <i>VvBMI1a</i> gene in the regulation of flowering in <i>Vitis vinifera</i> ‘Cabernet Sauvignon’, the subcellular localization, expression pattern, yeast two-hybrid, two-molecule fluorescence complementation and flowering time of transgenic Arabidopsis were analyzed. The results showed that <i>VvBMI1a</i>, a member of RING domain-containing proteins family from grapevine <i>(Vitis vinifera)</i>, is involved in controlling plant flowering time. Expression of <i>VvBMI1a</i> was abundant in the shoot tips and inflorescence meristems of grapevine. VvBMI1a protein is localized in the nucleus. VvBMI1a could interact with VvRING1a protein which belonged to PRC1. Phenotypic analysis showed that <i>VvBMI1a</i> over-expression lines had earlier flowering time than wild-type plants under long-day (LD) conditions. Further analysis by qRT-PCR and transcriptome suggests that both the suppression of <i>FLC</i> and activation of <i>FT</i>, <i>SOC1</i>, <i>SQUAMOSA PROMOTER BINDING PROTEIN-LIKE</i> 5 (<i>SPL5</i>), <i>AGL8</i> were observed in <i>VvBMI1a</i>-overexpressing lines, resulting in early flowering. Our results provide the evidence demonstrating the effectiveness of manipulating <i>VvBMI1a</i> to alter the flowering time of plants. In a word, ectopic overexpression of <i>VvBMI1a</i> inhibited the expression of <i>FLC</i>, activated the expression of <i>FT</i>, <i>SPL5</i>, <i>AGL8</i> to alter the flowering time of <i>Arabidopsis</i> plants.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-05-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140884516","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-05-06DOI: 10.1007/s13580-024-00620-8
Sasa Gacnik, Alenka Munda, Robert Veberic, Metka Hudina, Maja Mikulic-Petkovsek
The effects of preharvest or/and postharvest treatments with salicylic acid (SA) on the physicochemical quality of peach fruit, infection with the fungus Monilinia laxa and the phenolic response to infection in SA treatments in different peach peel tissues were evaluated. Preharvest SA treatments had an effect on the physical quality parameters only at harvest on three times SA-sprayed peaches, with which a lower hue angle and a higher percentage of red blush occurred, indicating better coloration of the fruit. It was found that the intensity of M. laxa infection was not affected by preharvest SA treatments, only by soaking peach fruit in SA solution after harvest. On SA soaked peach fruit, M. laxa spread between 1.8 and 3.9 mm/day slower than on non-soaked fruit, resulting in a 34% lower intensity of infection five days after infection. Peach fruit treated with SA after harvest also had a significantly lower percentage of sporulating fruit (7.8%) compared to non-soaked fruit (68.9%). The phenolic response differed between tissues, since the proportion of hydroxycinnamic acids and anthocyanins was higher in the healthy tissue of infected fruit, while the proportion of flavanols was higher in the boundary tissue of infected fruit. The strongest phenolic response to infection and treatments with SA was in higher levels of neochlorogenic acid, cyanidin-3-glucosides and cyanidin-3-rutinosides.
本研究评估了水杨酸(SA)采收前或/和采收后处理对桃果实理化质量的影响,以及不同桃皮组织在水杨酸(SA)处理下的真菌感染和酚类物质对感染的反应。采收前的 SA 处理仅在三次喷洒 SA 的桃子采收时对物理质量参数有影响,其色调角更低,红晕比例更高,表明果实着色更好。研究发现,采收前的 SA 处理不会影响棉铃虫感染的强度,只有在采收后将桃果浸泡在 SA 溶液中才会产生影响。与未浸泡的果实相比,在浸泡过 SA 的桃果上,赤霉病菌的传播速度为 1.8 至 3.9 毫米/天,感染后五天的感染强度降低了 34%。与未浸泡的果实(68.9%)相比,收获后用 SA 处理过的桃果的孢子果比例(7.8%)也明显较低。不同组织的酚类反应也不同,受感染果实的健康组织中羟基肉桂酸和花青素的比例较高,而受感染果实的边界组织中黄烷醇的比例较高。酚类物质对感染和 SA 处理的最强反应是新绿原酸、花青素-3-葡萄糖苷和花青素-3-芸香糖苷含量较高。
{"title":"The use of preharvest and postharvest treatments with salicylic acid to control brown rot and the response to its infection with the synthesis of phenolic compounds in peach fruit","authors":"Sasa Gacnik, Alenka Munda, Robert Veberic, Metka Hudina, Maja Mikulic-Petkovsek","doi":"10.1007/s13580-024-00620-8","DOIUrl":"https://doi.org/10.1007/s13580-024-00620-8","url":null,"abstract":"<p>The effects of preharvest or/and postharvest treatments with salicylic acid (SA) on the physicochemical quality of peach fruit, infection with the fungus <i>Monilinia laxa</i> and the phenolic response to infection in SA treatments in different peach peel tissues were evaluated. Preharvest SA treatments had an effect on the physical quality parameters only at harvest on three times SA-sprayed peaches, with which a lower hue angle and a higher percentage of red blush occurred, indicating better coloration of the fruit. It was found that the intensity of <i>M. laxa</i> infection was not affected by preharvest SA treatments, only by soaking peach fruit in SA solution after harvest. On SA soaked peach fruit, <i>M. laxa</i> spread between 1.8 and 3.9 mm/day slower than on non-soaked fruit, resulting in a 34% lower intensity of infection five days after infection. Peach fruit treated with SA after harvest also had a significantly lower percentage of sporulating fruit (7.8%) compared to non-soaked fruit (68.9%). The phenolic response differed between tissues, since the proportion of hydroxycinnamic acids and anthocyanins was higher in the healthy tissue of infected fruit, while the proportion of flavanols was higher in the boundary tissue of infected fruit. The strongest phenolic response to infection and treatments with SA was in higher levels of neochlorogenic acid, cyanidin-3-glucosides and cyanidin-3-rutinosides.</p>","PeriodicalId":13123,"journal":{"name":"Horticulture Environment and Biotechnology","volume":null,"pages":null},"PeriodicalIF":2.4,"publicationDate":"2024-05-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140884573","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Improper handling degrades the quality of the produce and causes economic losses. Thus, to study the effect of post-harvest handling on essential oil content and chemical constitutions, different experiments were conducted on two aromatic grasses. The first experiment was conducted on lemongrass crop using three accessions (A1, A2, and A3) and three storage times (0, 24, and 48 h), the second experiment was conducted on palmarosa crop with five harvesting dates (12 October, 27 October, 10 November, 25 November, and 10 December) and three storage time (0, 24 and 48 h). The essential oil percentage of the major compound of lemongrass (citral) was recorded significantly higher in accession A1, while 46.49% higher EO content was recorded when processing the biomass after 48 h of storage as compared to 0 h. Significantly higher (93.84%) increase in essential oil content of palmarosa was recorded on the 25 November harvesting date, while 112.69% higher EO content was recorded for storage of 48 h than 0 h. The major chemical compound geraniol attained the highest percentage (88%) on the 10 December harvesting date and storage time of 48 h recorded 85.78% higher EO content than 0 h. The degradation of constituents, rearrangement, and disappearance results in variations in essential oil composition. Harvesting at proper maturity and quality stages with longer storage time of the plant resulted in quality essential oil when compared to early harvest and shorter storage time in both aromatic plants.