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Physiological response of potato leaves to uniconazole under drought stress during the tuber expansion period 块茎膨大期干旱胁迫下马铃薯叶片对烯效唑的生理反应
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-25 DOI: 10.1007/s13580-024-00612-8
Kaixin Ding, Ying Shan, Lichun Wang, Guokui Tian, Fengyun Li, Haiyan Wang, Ze Pang, Yang Pan, Hui Jiang

Long-term drought stress has irreversible effects on potato growth and reduces yield. Uniconazole can alleviate the growth inhibition and plant damage resulting from drought stress. In the current study, the effects of drought stress on the leaf physiology and yield of two potato varieties (Kexin No. 1, drought-tolerant, and Atlantic, drought-sensitive) and the ability of uniconazole to promote growth and productivity under drought conditions were studied. The results showed that uniconazole could effectively alleviate the degradation of chlorophyll under drought stress, and drought significantly inhibited the photosynthetic rate (Pn), transpiration rate (Tr), stomatal conductance (Gs), and intercellular CO2 concentration (Ci) of the leaves of the two potato varieties. Exogenous uniconazole effectively alleviated the inhibitory effect of drought on the photosynthetic parameters of potato leaves. Compared with drought treatment, uniconazole treatment reduced malondialdehyde (MDA), hydrogen peroxide (H2O2) and superoxide anion (O2) production in the leaves of Kexin No. 1 and Atlantic plants and increased the activity of antioxidant enzymes, alleviating the loss of yield factors caused by drought stress. In addition, the antioxidant enzyme activity and nonenzymatic antioxidant activity of both varieties increased in response to drought stress. Drought + uniconazole treatment further increased the contents of the osmotic adjustment substances soluble protein and proline and ascorbate-glutathione (ASA-GSH) cycle products and substrates, including ascorbic acid (ASA), dehydroascorbate (DHA), glutathione (GSH) and oxidized glutathione (GSSG). Drought + uniconazole treatment also increased the ratio of ASA/DHA and GSH/GSSG in the two potato varieties under drought stress. This enhancement elevated the levels of reducing power and antioxidant capacity in the leaves, thus reducing the impacts of reactive oxygen species on the cell membrane. The drought-tolerant variety Kexin No. 1 exhibited a greater recovery than did the drought-sensitive variety Atlantic. These results provide a valuable reference for understanding the mechanism of drought resistance in potato plants and the effectiveness of uniconazole in alleviating drought-induced stress.

长期干旱胁迫会对马铃薯的生长造成不可逆的影响并降低产量。烯效唑可以缓解干旱胁迫对马铃薯生长的抑制和对植株的伤害。在本研究中,研究了干旱胁迫对两个马铃薯品种(耐旱的科欣 1 号和对干旱敏感的大西洋)叶片生理机能和产量的影响,以及咪鲜胺在干旱条件下促进生长和提高产量的能力。结果表明,在干旱胁迫下,咪唑能有效缓解叶绿素降解,干旱显著抑制了两个马铃薯品种叶片的光合速率(Pn)、蒸腾速率(Tr)、气孔导度(Gs)和细胞间二氧化碳浓度(Ci)。外源烯效唑能有效缓解干旱对马铃薯叶片光合参数的抑制作用。与抗旱处理相比,烯效唑处理降低了克新1号和大西洋植株叶片中丙二醛(MDA)、过氧化氢(H2O2)和超氧阴离子(O2-)的产生,提高了抗氧化酶的活性,减轻了干旱胁迫造成的产量因子损失。此外,两个品种的抗氧化酶活性和非酶抗氧化活性在干旱胁迫下均有所提高。干旱+烯效唑处理进一步增加了渗透调节物质可溶性蛋白和脯氨酸的含量,以及抗坏血酸-谷胱甘肽(ASA-GSH)循环产物和底物的含量,包括抗坏血酸(ASA)、脱氢抗坏血酸(DHA)、谷胱甘肽(GSH)和氧化谷胱甘肽(GSSG)。干旱+烯效唑处理也提高了干旱胁迫下两个马铃薯品种的 ASA/DHA 和 GSH/GSSG 比率。这种增强提高了叶片中还原力和抗氧化能力的水平,从而减少了活性氧对细胞膜的影响。耐旱品种 "科欣 1 号 "比干旱敏感品种 "大西洋 "的恢复能力更强。这些结果为了解马铃薯植物的抗旱机理以及烯效唑缓解干旱引起的胁迫的有效性提供了有价值的参考。
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引用次数: 0
Mining of differentially expressed genes from Korean wild grapes responding to grapevine leaf rust pathogen (Phakopsora euvitis) infection 挖掘韩国野生葡萄中响应葡萄叶锈病病原体(Phakopsora euvitis)感染的差异表达基因
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-22 DOI: 10.1007/s13580-023-00592-1
Zar Le Myint, Srinivasan Ramalingam, Soon Young Ahn, Hae Keun Yun

Grapevine leaf rust (GLR) caused by Phakopsora euvitis is a serious disease that results in severe leaf necrosis and early plant defoliation. This study sought to understand the plant host response against GLR at the molecular level and select useful genes for the breeding of resistant grapes. Hence, transcriptome analysis was conducted in two pathogen-inoculated Korean wild grape genotypes, namely, Vitis coignetiae Pulliant (Vc) and V. flexuosa Thunb (Vf), resistant and susceptible to GLR, respectively. RNAs were extracted from uninfected and infected leaves 24 h post-inoculation (hpi). In transcriptome analysis, a total of differentially expressed genes (DEGs) were 3979 and 2436 in the resistant and susceptible genotypes, of which 1765 and 1162 were up-regulated, and 2214 and 1274 were down-regulated, respectively. The top five up-regulated genes in Vc compared to Vf were homolog of carrot EP3-3 chitinase, calcineurin B-like proteins (CBL)-interacting protein kinase 20 (CIPK20), chalcone and stilbene synthase family protein, osmotin 34, and major latex protein (MLP)-like protein 423 (MLP423). The five most down-regulated genes in Vc compared to Vf were RADIALIS (RAD)-like 1, flavonol synthase 1, glutamine synthetase 2, RAD-like 6, and GDSL-like lipase/acylhydrolase superfamily protein, which were validated for their expression by real-time PCR. According to the Gene Ontology (GO) analysis, most of the up-regulated genes in Vc were associated with metabolic processes, whereas, most of down-regulated genes in Vf were associated with catalytic activity. The down-regulated genes in Vc and up-regulated genes in Vf were mostly associated with metabolic processes and catalytic activity. Defense-related genes, including phenylalanine ammonia-lyase (PAL), pathogenesis-related (PR) proteins, and salicylic acid (SA)-dependent responses were differentially expressed against the infection by the pathogen. This is the first report on the transcriptome analysis of grapevines in response to GLR and provides a basis for further studies on the discovery of resistant genes and the development of GLR-resistant grapevine varieties.

由葡萄叶锈病(Phakopsora euvitis)引起的葡萄叶锈病(GLR)是一种严重的病害,会导致严重的叶片坏死和早期植株落叶。本研究旨在从分子水平了解植物宿主对 GLR 的反应,并为抗病葡萄的育种筛选有用的基因。因此,对两种病原体接种的韩国野生葡萄基因型(即 Vitis coignetiae Pulliant (Vc) 和 V. flexuosa Thunb (Vf))进行了转录组分析,这两种基因型分别对 GLR 具有抗性和易感性。从接种后 24 小时(hpi)未感染和感染的叶片中提取 RNA。在转录组分析中,抗性基因型和易感基因型的差异表达基因(DEG)分别为 3979 个和 2436 个,其中上调基因分别为 1765 个和 1162 个,下调基因分别为 2214 个和 1274 个。与 Vf 相比,Vc 中上调最多的五个基因是胡萝卜 EP3-3 几丁质酶同源物、钙神经蛋白 B 样蛋白(CBL)-交互蛋白激酶 20(CIPK20)、查尔酮和链烯合成酶家族蛋白、渗透蛋白 34 和主要胶乳蛋白(MLP)样蛋白 423(MLP423)。与 Vf 相比,Vc 中下调最多的五个基因是 RADIALIS(RAD)-like 1、黄酮醇合成酶 1、谷氨酰胺合成酶 2、RAD-like 6 和 GDSL-like 脂酶/酰基水解酶超家族蛋白,这些基因的表达均通过实时 PCR 验证。根据基因本体(GO)分析,Vc 中大部分上调基因与代谢过程有关,而 Vf 中大部分下调基因与催化活性有关。Vc 中的下调基因和 Vf 中的上调基因大多与代谢过程和催化活性有关。与防御相关的基因,包括苯丙氨酸氨解酶(PAL)、致病相关蛋白(PR)和水杨酸(SA)依赖性反应,在病原体感染时有差异表达。这是第一份关于葡萄藤应对 GLR 的转录组分析报告,为进一步研究抗性基因和开发抗 GLR 的葡萄品种奠定了基础。
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引用次数: 0
Curcumin leads to responses of grapes to aluminum stress by inducing whole genome hypo-methylation 姜黄素通过诱导全基因组低甲基化使葡萄对铝胁迫做出反应
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-22 DOI: 10.1007/s13580-023-00565-4
Xiaoqin Li, Yongfu Zhang, Zhen Ren, Kai Wang, Zhao Liu, Shiqin Xu, Zuqin Qiao

Aluminum (Al) is the most abundant element in the earth crust. Due to the abuse of phosphate fertilizer, acid rain has been frequently observed in recent years, resulting in the conversion of non-toxic aluminosilicates in the soil into Al ions, thereby causing stress to plants. As a DNA methylation inhibitor, curcumin can effectively counteract the Al stress on plants, while the epigenetic mechanism remains unclear. This study discusses the epigenetic mechanism of curcumin counteracting Al stress on grape. The results demonstrated that curcumin could significantly relieve the Al stress symptoms of grapes and reduce its whole genome methylation level. Al stress and curcumin treatment did not cause variations in the methylation level in each chromosome. While Al stress led to a slight increase in the average methylation level of each chromosome, and treatment by curcumin led to a significant decrease in the average methylation level of each chromosome. Specifically, the sites of CG and CHG were decreased significantly, and the site of CHH was increased or decreased significantly. Analysis of differentially-methylated regions (DMRs) revealed that treatment by curcumin led to an increase in hypo-DMRs in the whole genome of grape, and analysis of differentially-methylated genes (DMGs) also identified differentially related genes of hypo-DMRs in the whole genome of grapes, suggesting that curcumin triggers responses to Al stress by regulating hypo-methylation mode of the whole genome of grape. Additionally, Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis demonstrated that DMGs of grapes generate responses to Al stress by participating in galactose metabolism, ascorbate, and aldarate metabolism, and amino sugar and nucleotide sugar metabolism pathways of carbohydrate metabolism in the KEGG subclass.

铝(Al)是地壳中含量最高的元素。由于滥用磷肥,近年来酸雨频发,导致土壤中无毒的铝硅酸盐转化为铝离子,从而对植物造成胁迫。姜黄素作为一种 DNA 甲基化抑制剂,能有效抵御铝对植物的胁迫,但其表观遗传机制尚不清楚。本研究探讨了姜黄素对抗葡萄铝胁迫的表观遗传学机制。结果表明,姜黄素能显著缓解葡萄的铝胁迫症状,并降低其全基因组甲基化水平。铝胁迫和姜黄素处理并未引起各染色体甲基化水平的变化。铝胁迫导致每条染色体的平均甲基化水平略有上升,而姜黄素处理则导致每条染色体的平均甲基化水平显著下降。具体来说,CG 和 CHG 的位点明显减少,CHH 的位点明显增加或减少。差异甲基化区域(DMRs)分析表明,姜黄素处理导致葡萄全基因组中低甲基化区域增加,差异甲基化基因(DMGs)分析也发现了葡萄全基因组中低甲基化区域的差异相关基因,表明姜黄素通过调节葡萄全基因组的低甲基化模式触发对铝胁迫的响应。此外,京都基因组百科全书(KEGG)富集分析表明,葡萄的DMGs通过参与KEGG亚类中的半乳糖代谢、抗坏血酸和醛酸代谢,以及碳水化合物代谢中的氨基糖和核苷酸糖代谢途径,对铝胁迫产生响应。
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引用次数: 0
Effect of nitrogen and iron synergistic application on physiological growth, berry quality, and flavonoid content of wine grapes 氮和铁协同作用对酿酒葡萄生理生长、浆果质量和黄酮类化合物含量的影响
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-21 DOI: 10.1007/s13580-024-00604-8
Yaqi Wang, Yueran Hui, Quan Sun, Rui Wang

This study evaluates and contrasts the concurrent application of nitrogen (N) fertilizer and diverse forms of iron (Fe) fertilizer on the physiological growth and components of wine grape berries. The objective is to provide both theoretical insights and practical support to enhance berry quality and optimize wine fermentation processes. Eight treatments were established encompassing two main treatments (without urea and with urea application) and four sub-treatments (ferrous sulfate, ferrous gluconate, EDTA-Fe, and ferric citrate). Results indicate that the synergistic application of N fertilizer and chelated Fe fertilizer significantly improves the photosynthetic characteristics of grape leaves, leading to a remarkable enhancement in leaf chlorophyll content (13.7–83.9%). Moreover, the combined application of N and Fe fertilizers significantly boosts berry tannin levels (11.2–21.5%), anthocyanins (2.8–117%), and total phenols (1.9–41.2%). Additionally, there is a notable increase in the relative abundance of amino acids and flavonoids, contributing to an augmented yield (3.9–36.1%). Correlation analysis suggests that the synergistic application of N and Fe improves berry quality by augmenting N and Fe content in the leaves, promoting photosynthesis, improving water-use efficiency, and increasing leaf chlorophyll content. Overall, the comprehensive score of the principal component analysis reveals that the synergistic application of N fertilizer and chelated Fe fertilizer has the most significant effect, leading to substantial improvements in the quality and yield of the berries. These findings provide critical theoretical support for future fertilizer strategies aimed at enhancing the quality and nutritional value of berries and wine.

本研究评估和对比了同时施用氮肥和不同形式的铁肥对酿酒葡萄浆果的生理生长和成分的影响。目的是为提高浆果质量和优化葡萄酒发酵过程提供理论依据和实践支持。研究共设置了八个处理,包括两个主要处理(不施尿素和施用尿素)和四个次处理(硫酸亚铁、葡萄糖酸亚铁、乙二胺四乙酸铁和柠檬酸铁)。结果表明,氮肥和螯合铁肥的协同施用能显著改善葡萄叶片的光合特性,使叶绿素含量显著提高(13.7%-83.9%)。此外,氮肥和铁肥的联合施用还能显著提高浆果单宁含量(11.2%-21.5%)、花青素含量(2.8%-117%)和总酚含量(1.9%-41.2%)。此外,氨基酸和黄酮类化合物的相对含量也显著增加,从而提高了产量(3.9-36.1%)。相关分析表明,氮和铁的协同作用可通过增加叶片中的氮和铁含量、促进光合作用、提高水分利用效率和增加叶片叶绿素含量来改善浆果质量。总之,主成分分析的综合得分显示,氮肥和螯合铁肥的协同施用效果最显著,可大幅提高浆果的质量和产量。这些发现为未来旨在提高浆果和葡萄酒质量和营养价值的施肥策略提供了重要的理论支持。
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引用次数: 0
Improvement of seed germination in winter strawberry (Rubus buergeri Miq.) 提高冬草莓(Rubus buergeri Miq.)
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-16 DOI: 10.1007/s13580-023-00594-z

Abstract

Seeds of winter strawberry (Rubus buergeri Miq.) germinate at a low rate over an extended period due to their hard coat and deep dormancy. This study compared the effects of different physicochemical treatments on the germination rate and duration of the germination period of winter strawberry seeds. Seeds were treated by sandpaper scarification, sulfuric acid (H2SO4) scarification, and gibberellic acid (GA3). Of these physicochemical treatments, sandpaper scarification produced the greatest improvement to the germination rate and shortening of the germination period. Treatment with GA3 also produced positive effects, albeit to a lesser level. By contrast, sulfuric acid scarification decreased the germination rate relative to the control group. Although GA3 treatment had positive effects on true leaf formation and subsequent growth of seedlings, sandpaper scarification was the most effective method of inducing true leaf formation within a short period and, subsequently, for ensuring normal growth. Sandpaper scarification of seed resulted in > 90% germination, representing an approximately 80% improvement compared with the control group by week 6. Moreover, true leaves emerged in ~ 70% of seedlings within 6 weeks. Sandpaper scarification was thus a very effective seed treatment, not only for improving the germination rate and shortening the germination period of winter strawberry seeds but also for producing healthy seedlings.

摘要 冬季草莓(Rubus buergeri Miq.)种子由于外皮坚硬、休眠期较长,发芽率较低。本研究比较了不同理化处理对冬草莓种子发芽率和发芽期的影响。对种子进行了砂纸结疤、硫酸(H2SO4)结疤和赤霉素(GA3)处理。在这些理化处理方法中,砂纸结疤法对发芽率的提高和发芽期的缩短效果最好。GA3 处理也产生了积极效果,但程度较低。相反,与对照组相比,硫酸结疤会降低发芽率。虽然 GA3 处理对真叶形成和秧苗随后的生长有积极影响,但砂纸划痕是在短期内诱导真叶形成并确保随后正常生长的最有效方法。对种子进行砂纸划痕处理后,第 6 周的发芽率达到 90%,与对照组相比提高了约 80%。此外,约 70% 的幼苗在 6 周内长出了真叶。因此,砂纸划痕是一种非常有效的种子处理方法,不仅能提高冬草莓种子的发芽率,缩短发芽期,还能培育出健康的幼苗。
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引用次数: 0
Acclimation and hardness enhancement through ultraviolet-B irradiation of fruit vegetable seedlings grown in a plant factory with artificial light 通过紫外线-B 照射人工光源植物工厂培育的果蔬幼苗,使其适应环境并提高硬度
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-14 DOI: 10.1007/s13580-024-00605-7

Abstract

This study determined the optimal ultraviolet (UV)-B dose of major vegetable seedlings in a plant factory with artificial light for labor saving. Four vegetable seedlings, cucumber, watermelon, tomato, and pepper, were used as test crops. UV-B irradiation was conducted at four different UV-B doses of 1.08, 2.16, 3.24, and 4.32 kJ·m−2 d−1 for 3 h a day for 3 days after graft-take and temporary planting of fruit vegetable seedlings. After UV-B irradiation, seedlings were moved to a greenhouse and exposed to ultraviolet rays of sunlight; growth was observed; and chlorophyll fluorescence was measured. When subjected to UV-B irradiation, minimal changes in external traits of fruit vegetable seedlings were observed at doses below 2.16 kJ·m−2·d−1, while at higher intensities, issues such as chlorosis emerged. When UV-B was irradiated at 4.32 kJ·m−2·d−1, cucumber exhibited a decrease in hypocotyl length by 6.4 cm, and watermelon by 1.7 cm compared with the control. Additionally, cucumber and watermelon both showed a decrease in leaf area by 75.6 cm2 and 49.8 cm2, respectively, indicating a tendency of growth inhibition. For tomatoes and peppers, when UV-B was irradiated at 1.08 kJ·m−2·d−1, they exhibited an improvement in compactness by 5 and 2.5 mg·cm−1, respectively, compared with the control. Chlorophyll fluorescence parameters indicated a positive correlation between ABS/RC and DIO/RC with increasing UV-B doses, while FV/FM and PIABS showed a negative correlation. Using UV-B during the seedling acclimation period, seedlings can adapt to external UV radiation, thereby suppressing excessive growth and promoting the production of robust seedlings. Moreover, the utilization of UV-B within a plant factory allows for conducting the acclimation process within the facility, reducing the need for seedlings to be transported to conventional nurseries and offering potential benefits in terms of operational efficiency.

摘要 本研究确定了植物工厂中主要蔬菜秧苗的最佳紫外线(UV)-B 剂量,使用人工光源以节省劳动力。黄瓜、西瓜、番茄和辣椒四种蔬菜幼苗被用作试验作物。在蔬菜果苗嫁接和临时定植后的 3 天内,以 1.08、2.16、3.24 和 4.32 kJ-m-2 d-1 四种不同的紫外线-B 剂量进行照射,每天照射 3 小时。紫外线-B 照射后,秧苗被移至温室,暴露在阳光紫外线下,观察生长情况,并测量叶绿素荧光。在接受紫外线-B 照射时,如果剂量低于 2.16 kJ-m-2-d-1,果蔬幼苗的外部性状变化极小,而如果剂量较高,则会出现萎黄等问题。当紫外线-B 的照射强度为 4.32 kJ-m-2-d-1 时,与对照相比,黄瓜的下胚轴长度减少了 6.4 厘米,西瓜减少了 1.7 厘米。此外,黄瓜和西瓜的叶面积分别减少了 75.6 平方厘米和 49.8 平方厘米,显示出生长受抑制的趋势。西红柿和辣椒在 1.08 kJ-m-2-d-1 的紫外线-B 照射下,叶片紧密度与对照组相比分别提高了 5 毫克-厘米-1 和 2.5 毫克-厘米-1。叶绿素荧光参数表明,随着 UV-B 剂量的增加,ABS/RC 和 DIO/RC 呈正相关,而 FV/FM 和 PIABS 呈负相关。在幼苗适应期利用 UV-B,可使幼苗适应外部紫外线辐射,从而抑制过度生长,促进培育壮苗。此外,在植物工厂内使用 UV-B,可以在工厂内进行适应过程,减少了将秧苗运往传统苗圃的需要,并在运营效率方面提供了潜在的好处。
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引用次数: 0
Genome-wide identification and analysis of expression pattern of REVEILLE transcription factors in castor (Ricinus communis L.) 蓖麻(Ricinus communis L.)中 REVEILLE 转录因子的全基因组鉴定和表达模式分析
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-12 DOI: 10.1007/s13580-023-00580-5

Abstract

REVEILLE (RVEs) transcription factors play an important role in regulating circadian clock, plant growth and development, and stress responses. While RVEs have been identified in various plant species, comprehensive genome exploration and analysis of RVEs in castor (Ricinus communis L.) have not been previously reported. In this study, we identified RcRVEs in the castor genome through sequence alignment and conducted an analysis encompassing gene structures, protein motifs, physicochemical properties, transcription patterns under cold stress, different tissues, and diurnal rhythm. A total of five RcRVEs were pinpointed in the castor genome. Evolutionary tree analysis categorized these RcRVEs into three distinct groups, implying that different RcRVEs may fulfill distinct biological functions. Furthermore, several abiotic stresses and hormone-responsive cis-acting elements were found in the promoters of the RcRVEs. RNA-sequencing (RNA-seq) analysis revealed that RcRVE1 and RcRVE7 were induced by cold stress and exhibited upregulation over time, indicating their involvement in regulating cold adaptation in castor plants. Five RcRVEs have notably higher expression levels in leaves compared to other tissues. The expression of all RcRVEs displayed diurnal rhythms under light/dark cycles. This study provides valuable insights into the potential functions of RcRVEs in regulating castor’s growth and development, and responses to cold stress.

摘要 REVEILLE(RVEs)转录因子在调控昼夜节律、植物生长发育和胁迫反应方面发挥着重要作用。虽然已在多种植物物种中发现了 RVEs,但之前还没有关于蓖麻(Ricinus communis L.)中 RVEs 的全面基因组探索和分析的报道。在本研究中,我们通过序列比对确定了蓖麻基因组中的 RcRVEs,并进行了包括基因结构、蛋白质基序、理化性质、冷胁迫下的转录模式、不同组织和昼夜节律在内的分析。结果在蓖麻基因组中发现了五个RcRVE。进化树分析将这些RcRVE分为三个不同的组,这意味着不同的RcRVE可能具有不同的生物学功能。此外,还在 RcRVEs 的启动子中发现了几种非生物胁迫和激素反应性顺式作用元件。RNA-sequencing(RNA-seq)分析表明,RcRVE1和RcRVE7受到冷胁迫的诱导,并随着时间的推移而上调,表明它们参与调控蓖麻植物的冷适应性。与其他组织相比,五个 RcRVE 在叶片中的表达水平明显较高。在光照/黑暗循环下,所有 RcRVEs 的表达都表现出昼夜节律。这项研究为了解 RcRVEs 在调节蓖麻生长发育和应对冷胁迫方面的潜在功能提供了有价值的见解。
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引用次数: 0
The first genetic linkage map of sea buckthorn (Hippophae rhamnoides) and QTL mapping of growth-related traits 沙棘(Hippophae rhamnoides)的首个遗传连锁图谱和生长相关性状的 QTL 图谱
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-11 DOI: 10.1007/s13580-024-00597-4
Ruiman Geng, Youzhi Han, Zhihong Liu, Qing Xie

Sea buckthorn (Hippophae rhamnoides), a hardy deciduous shrub of the family Elaeagnaceae, is known for its economic and ecological importance due to its wide use in medicine, food, windbreaks, and sand fixation. In this study, the first genetic linkage map of H. rhamnoides was constructed based on an F1 population (H. rhamnoides subsp. mongolica ‘wulangemu’ × H. rhamnoides subsp. sinensis ‘wucixiong’) by using start codon targeted (SCoT), sequence-related amplified polymorphism (SRAP), and simple sequence repeat (SSR) markers. The linkage map contained 1143 markers with a total length of 1889.46 centimorgans (cM), including 12 linkage groups (LG) and covering 97.17% of the estimated genome, with an average marker density of 1.67 cM. According to the phenotypic variation analysis, 61 QTLs were identified. Among these QTLs, there were 18 QTLs for seedling height, 27 QTLs for ground diameter, two QTLs for primary branching angle, 11 QTLs for leaf width, and 3 QTLs for leaf shape index. The range of phenotypic variation explained by these QTLs was 10.7 ~ 21.9%. The QTLs identified by high-density linkage mapping reported in this study will be useful for the molecular breeding of sea buckthorn.

沙棘(Hippophae rhamnoides)是一种坚韧的落叶灌木,属榆叶梅科,因其在医药、食品、防风固沙等方面的广泛应用而具有重要的经济和生态价值。本研究利用起始密码子定向标记(SCoT)、序列相关扩增多态性标记(SRAP)和简单序列重复标记(SSR),在 F1 群体(H. rhamnoides subsp.该连接图包含 1143 个标记,总长度为 1889.46 厘米(cM),包括 12 个连接组(LG),覆盖了估计基因组的 97.17%,平均标记密度为 1.67 cM。根据表型变异分析,确定了 61 个 QTL。其中,苗高 QTL 18 个,地径 QTL 27 个,主分枝角 QTL 2 个,叶宽 QTL 11 个,叶形指数 QTL 3 个。这些 QTL 解释的表型变异范围为 10.7% ~ 21.9%。本研究报告中通过高密度连接图谱鉴定的 QTLs 将有助于沙棘的分子育种。
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引用次数: 0
Genetic diversity of Thailand reserved mulberry germplasm based on morphological characteristics and newly developed EST-SSR and SRAP markers 基于形态特征和新开发的 EST-SSR 和 SRAP 标记的泰国保留桑种质的遗传多样性
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-03-06 DOI: 10.1007/s13580-024-00599-2
Nutdanai Putthisawong, Surapa Nutthapornnitchakul, Natnicha Thumthuan, Chatuporn Kuleung, Athipat Ngernmuen, Piyama Tasanasuwan, Chatchawan Jantasuriyarat

Mulberry (Morus L.) is an important crop for the sericulture industry, serving as the primary food source for the silkworm Bombyx mori L. Thailand has a long history of practicing sericulture and has imported and improved upon many indigenous cultivars to create new hybrid offspring. It is crucial to understand the genetic divergence of these accessions for their conservation and utilization in selection and breeding. In this study, 85 representative mulberry accessions in Thailand were observed morphology and analyzed for their genetic relationships using SRAP and EST-SSR markers. The findings indicate that the morphological traits of Thai mulberry are distinctive enough to differentiate between M. macroura Miq. and wild hybrid mulberry, and a group consisting of M. alba L. and M. australis Poir., and their hybrids. 12 SRAP primer combinations produced 193 polymorphic amplicons with an average of 17.0 bands per primer set, and the mean of PIC was 0.259. Eleven novel EST-SSR primers generated 35 amplicons with an average of 3.2 alleles per primer set, and the average PIC was 0.139. The dendrogram obtained using the UPGMA algorithm in R studio showed that the wild and wild hybrid mulberry were genetically distant from the domesticated species studied here. These findings have important implications for the characterization, improvement, molecular systematics, and conservation of Thai mulberry germplasm.

桑树(Morus L.)是养蚕业的重要作物,是桑蚕的主要食物来源。泰国养蚕业历史悠久,引进并改良了许多本土栽培品种,创造出新的杂交后代。了解这些栽培品种的遗传差异对于保护它们并在选育中加以利用至关重要。在本研究中,利用 SRAP 和 EST-SSR 标记对泰国具有代表性的 85 个桑树品种进行了形态学观察和遗传关系分析。研究结果表明,泰国桑树的形态特征足以区分M. macroura Miq.和野生杂交桑树,以及由M. alba L.和M. australis Poir.及其杂交种组成的群体。12 个 SRAP 引物组合产生了 193 个多态性扩增子,平均每个引物组有 17.0 条带,PIC 平均值为 0.259。11 个新型 EST-SSR 引物产生了 35 个扩增子,平均每个引物组有 3.2 个等位基因,平均 PIC 为 0.139。用 R studio 中的 UPGMA 算法绘制的树枝图显示,野生桑和野生杂交桑与本文研究的驯化桑在遗传上有一定的距离。这些发现对泰国桑树种质的特征描述、改良、分子系统学和保护具有重要意义。
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引用次数: 0
Advanced assessment of nutrient deficiencies in greenhouse with electrophysiological signals 利用电生理信号对温室营养缺乏症进行高级评估
IF 2.4 3区 农林科学 Q1 Agricultural and Biological Sciences Pub Date : 2024-02-13 DOI: 10.1007/s13580-023-00589-w
Daniel Tran, Elena Najdenovska, Fabien Dutoit, Carrol Plummer, Nigel Wallbridge, Marco Mazza, Cédric Camps, Laura Elena Raileanu

Nutrient deficiencies are one of the main causes of significant reductions in commercial crop production by affecting associated growth factors. Proper plant nutrition is crucial for crop quality and yield therefore, early and objective detection of nutrient deficiency is required. Recent literature has explored the real-time monitoring of plant electrical signal, called electrophysiology, applied on tomato crop cultivated in greenhouse. This sensor allows to identify the stressed state of a plant in the presence of different biotic and abiotic stressors by employing machine learning techniques. The aim of this study was to evaluate the potential of electrophysiology signal recordings acquired from tomato plants growing in a production greenhouse environment, to detect the stress of a plant triggered by the deficiency of several main nutrients. Based on a previously proposed workflow consisting of continuous acquisition of electrical signal then application of machine learning techniques, the minimum signal features was evaluated. This study presents classification models that are able to distinguish the plant’s stressed state with good accuracy, namely 78.5% for manganese, 78.1% for iron, 89.6% for nitrogen, and 78.1% for calcium deficiency, and therefore suggests a novel path to detect nutrient deficiencies at an early stage. This could constitute a novel practical tool to help and assist farmers in nutrition management.

养分缺乏会影响相关的生长因子,是导致商业作物产量大幅下降的主要原因之一。适当的植物营养对作物的质量和产量至关重要,因此需要及早客观地检测养分缺乏情况。最近有文献探讨了对植物电信号的实时监测,这种方法被称为电生理学,应用于温室栽培的番茄作物上。这种传感器可通过机器学习技术识别植物在不同生物和非生物压力下的受压状态。本研究的目的是评估从生长在生产温室环境中的番茄植株获取的电生理学信号记录的潜力,以检测植株因缺乏几种主要养分而引发的压力。根据之前提出的工作流程(包括连续采集电信号,然后应用机器学习技术),对最小信号特征进行了评估。这项研究提出的分类模型能够准确区分植物的压力状态,即锰缺乏为 78.5%、铁缺乏为 78.1%、氮缺乏为 89.6%、钙缺乏为 78.1%。这可以成为帮助和协助农民进行营养管理的一种新型实用工具。
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引用次数: 0
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Horticulture Environment and Biotechnology
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