Pub Date : 2026-03-01DOI: 10.1109/TBME.2025.3597274
Michael B Sano, Jordan A Fong, Robert H Williamson, Jewels Darrow, Logan Reeg, Kyle G Mathews, Callie A Fogle, Nathan C Nelson, Alina C Iuga, David A Gerber
Objective: The objective of this study was to investigate the effect of electrical dose on in vivo INSPIRE treatments which administer high voltage ultrashort alternating polarity electrical pulses with active temperature control.
Methods: INSPIRE was administered to healthy swine liver in vivo via a percutaneous single applicator and grounding pad approach. Using 45 °C temperature control, 6000 V waveforms consisting of 750 ns, 1000 ns, or 2000 ns bipolar pulses were administered to examine the effect of pulses approximately shorter than, equal to, and longer than the cell membrane charging time. Treatment volumes were assessed one week post treatment via computed tomography and cardiac safety was assessed via serum troponin analysis.
Results: Pulse duration did not significantly affect treatment volumes, however, dose was found to be a critical factor affecting treatment outcomes. For 0.0025 s doses, treatment volumes of 1.3±0.6 cm3 (2.4 × 0.9 cm) were created in 0.3 minutes. This increased to 12.8±4.8 cm3 (9.7 minutes, 3.9 × 2.5 cm) for 0.04 s doses. No significant changes in troponin levels were found.
Conclusion: This study demonstrated the in vivo safety of high voltage INSPIRE treatments without cardiac synchronization. There is a strong dose dependent effect on treatment volumes. Optimal treatment efficiency was found for treatment doses between 0.01 and 0.02 s with treatment times between 2-4 minutes.
Significance: Single applicator INSPIRE treatments significantly simplify treatment planning and clinical implementation versus traditional two to six applicator approaches. This study demonstrates that INSPIRE protocols can rapidly produce large spherical treatment zones while reducing treatment times by an order of magnitude compared to existing electroporation approaches.
{"title":"Dose Is a Critical Factor Affecting Treatment Volumes for Integrated Nanosecond Pulse Irreversible Electroporation (INSPIRE).","authors":"Michael B Sano, Jordan A Fong, Robert H Williamson, Jewels Darrow, Logan Reeg, Kyle G Mathews, Callie A Fogle, Nathan C Nelson, Alina C Iuga, David A Gerber","doi":"10.1109/TBME.2025.3597274","DOIUrl":"10.1109/TBME.2025.3597274","url":null,"abstract":"<p><strong>Objective: </strong>The objective of this study was to investigate the effect of electrical dose on in vivo INSPIRE treatments which administer high voltage ultrashort alternating polarity electrical pulses with active temperature control.</p><p><strong>Methods: </strong>INSPIRE was administered to healthy swine liver in vivo via a percutaneous single applicator and grounding pad approach. Using 45 °C temperature control, 6000 V waveforms consisting of 750 ns, 1000 ns, or 2000 ns bipolar pulses were administered to examine the effect of pulses approximately shorter than, equal to, and longer than the cell membrane charging time. Treatment volumes were assessed one week post treatment via computed tomography and cardiac safety was assessed via serum troponin analysis.</p><p><strong>Results: </strong>Pulse duration did not significantly affect treatment volumes, however, dose was found to be a critical factor affecting treatment outcomes. For 0.0025 s doses, treatment volumes of 1.3±0.6 cm<sup>3</sup> (2.4 × 0.9 cm) were created in 0.3 minutes. This increased to 12.8±4.8 cm<sup>3</sup> (9.7 minutes, 3.9 × 2.5 cm) for 0.04 s doses. No significant changes in troponin levels were found.</p><p><strong>Conclusion: </strong>This study demonstrated the in vivo safety of high voltage INSPIRE treatments without cardiac synchronization. There is a strong dose dependent effect on treatment volumes. Optimal treatment efficiency was found for treatment doses between 0.01 and 0.02 s with treatment times between 2-4 minutes.</p><p><strong>Significance: </strong>Single applicator INSPIRE treatments significantly simplify treatment planning and clinical implementation versus traditional two to six applicator approaches. This study demonstrates that INSPIRE protocols can rapidly produce large spherical treatment zones while reducing treatment times by an order of magnitude compared to existing electroporation approaches.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":"1039-1049"},"PeriodicalIF":4.5,"publicationDate":"2026-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144803997","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-27DOI: 10.1109/TBME.2026.3668768
Fengyuan Yang, Longlin Pi, Dan Chen, Zhenhu Liang, Yong Wang, Ye Zhang
Objective: Disorders of consciousness (DoC) diagnosis critically depends on accurate state discrimination to guide treatment and prognosis. Current EEG-based techniques face challenges of incomplete electrode coverage and manual feature reliance, due to the complex nature of DoC conditions.
Methods: This study proposes DoC-Informer, a CNN-Transformer framework for automated DoC discrimination under adaptive EEG settings. By integrating a channel-independent architecture-enabled by electrode position encoding and spatial transformers-with channel masking training, the framework employs: 1) Shallow Temporal Feature Encoding with parallel temporal convolutions to extract channel-independent temporal features; 2) Spatiotemporal Representation Modeling using a Spatial Transformer (with 3D electrode position encoding) to infer spatial dependencies and a Temporal Transformer for long-range dynamics. A Channel Masking Training Strategy enhances robustness to incomplete data.
Results: Extensive experiments on two real-world DoC datasets (including UWS and MCS patients) demonstrate DoC-Informer's superiority over the cutting-edge deep learning counterparts and a machine learning baseline, with results showing: 1) State-of-the-art performance, 2) Robustness to channel loss, and 3) Validated module efficacy via ablation studies.
Conclusion and significance: DoC-Informer bridges brain science and clinical needs by integrating anatomical priors (electrode coordinates) with adaptive deep learning. Its resilience to variable EEG configurations offers a practical solution for real-world DoC diagnosis, particularly in settings with sparse or incomplete recordings. The source code of the framework is available at https://github.com/pilonglin/docinformer.
{"title":"DoC-Informer: Automated Discrimination of Disorders of Consciousness under Adaptive EEG Settings.","authors":"Fengyuan Yang, Longlin Pi, Dan Chen, Zhenhu Liang, Yong Wang, Ye Zhang","doi":"10.1109/TBME.2026.3668768","DOIUrl":"https://doi.org/10.1109/TBME.2026.3668768","url":null,"abstract":"<p><strong>Objective: </strong>Disorders of consciousness (DoC) diagnosis critically depends on accurate state discrimination to guide treatment and prognosis. Current EEG-based techniques face challenges of incomplete electrode coverage and manual feature reliance, due to the complex nature of DoC conditions.</p><p><strong>Methods: </strong>This study proposes DoC-Informer, a CNN-Transformer framework for automated DoC discrimination under adaptive EEG settings. By integrating a channel-independent architecture-enabled by electrode position encoding and spatial transformers-with channel masking training, the framework employs: 1) Shallow Temporal Feature Encoding with parallel temporal convolutions to extract channel-independent temporal features; 2) Spatiotemporal Representation Modeling using a Spatial Transformer (with 3D electrode position encoding) to infer spatial dependencies and a Temporal Transformer for long-range dynamics. A Channel Masking Training Strategy enhances robustness to incomplete data.</p><p><strong>Results: </strong>Extensive experiments on two real-world DoC datasets (including UWS and MCS patients) demonstrate DoC-Informer's superiority over the cutting-edge deep learning counterparts and a machine learning baseline, with results showing: 1) State-of-the-art performance, 2) Robustness to channel loss, and 3) Validated module efficacy via ablation studies.</p><p><strong>Conclusion and significance: </strong>DoC-Informer bridges brain science and clinical needs by integrating anatomical priors (electrode coordinates) with adaptive deep learning. Its resilience to variable EEG configurations offers a practical solution for real-world DoC diagnosis, particularly in settings with sparse or incomplete recordings. The source code of the framework is available at https://github.com/pilonglin/docinformer.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147316967","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-25DOI: 10.1109/TBME.2026.3668071
Amedeo Ceglia, Francois Bailly, Pierre Puchaud, Lama Seoud, Mickael Begon
Objective: Estimating personalized muscle forces through musculoskeletal modeling is valuable for assessing patient status and monitoring clinical progress. However, this process involves numerous model parameters that are difficult to measure. Upper-limb applications are particularly limited due to the complexity of the system and the long computation times required for model calibration. This study proposes a rapid ($< $5 min) calibration method for upper-limb musculoskeletal models.
Methods: We calibrated maximal isometric force and optimal muscle length for 38 muscles across 10 degrees of freedom by matching muscle-generated moments with dynamically consistent joint moments. The method leverages experimental data including bony landmark trajectories from markerless motion capture, external forces, and electromyography (EMG).
Results: Joint moment estimation and calibration were completed together in less than five minutes. During hand-cycling, the calibrated model reduced EMG tracking error compared to the uncalibrated model (5.58$pm$0.92% vs. 6.30$pm$1.28%). Reliance on non-physiological residual moments was also lowered (12.68 vs. 23.61% of peak moment for calibrated vs. uncalibrated models, respectively).
Conclusion: The proposed method enables rapid calibration of upper-limb muscle parameters, improving accuracy in muscle force estimation and reducing dependence on residual moments.
Significance: This approach provides a fast and reliable framework for upper-limb musculoskeletal calibration, facilitating more accurate and clinically applicable muscle force estimation.
目的:通过肌肉骨骼模型估计个性化肌肉力量对评估患者状态和监测临床进展有价值。然而,这一过程涉及许多难以测量的模型参数。由于系统的复杂性和模型校准所需的长计算时间,上肢应用特别有限。本研究提出了一种快速($< $5 min)的上肢肌肉骨骼模型校准方法。方法:我们通过将肌肉产生的力矩与动态一致的关节力矩相匹配,校准了38块肌肉在10个自由度上的最大等距力和最佳肌肉长度。该方法利用实验数据,包括来自无标记运动捕捉、外力和肌电图(EMG)的骨骼地标轨迹。结果:联合力矩估计和标定在不到5分钟的时间内同时完成。在手动骑行过程中,与未校准模型相比,校准模型减少了肌电图跟踪误差(5.58$pm$0.92% vs 6.30$pm$1.28%)。对非生理残留矩的依赖也降低了(校准模型和未校准模型的峰值矩分别为12.68%和23.61%)。结论:该方法能够快速校准上肢肌肉参数,提高肌肉力估计的准确性,减少对残差的依赖。意义:该方法为上肢肌肉骨骼校准提供了一个快速可靠的框架,有助于更准确和临床应用的肌肉力估算。
{"title":"Fast Muscle-parameter Calibration using EMG and Markerless Kinematics for Neuromusculoskeletal Modeling: Application to Hand-cycling.","authors":"Amedeo Ceglia, Francois Bailly, Pierre Puchaud, Lama Seoud, Mickael Begon","doi":"10.1109/TBME.2026.3668071","DOIUrl":"https://doi.org/10.1109/TBME.2026.3668071","url":null,"abstract":"<p><strong>Objective: </strong>Estimating personalized muscle forces through musculoskeletal modeling is valuable for assessing patient status and monitoring clinical progress. However, this process involves numerous model parameters that are difficult to measure. Upper-limb applications are particularly limited due to the complexity of the system and the long computation times required for model calibration. This study proposes a rapid ($< $5 min) calibration method for upper-limb musculoskeletal models.</p><p><strong>Methods: </strong>We calibrated maximal isometric force and optimal muscle length for 38 muscles across 10 degrees of freedom by matching muscle-generated moments with dynamically consistent joint moments. The method leverages experimental data including bony landmark trajectories from markerless motion capture, external forces, and electromyography (EMG).</p><p><strong>Results: </strong>Joint moment estimation and calibration were completed together in less than five minutes. During hand-cycling, the calibrated model reduced EMG tracking error compared to the uncalibrated model (5.58$pm$0.92% vs. 6.30$pm$1.28%). Reliance on non-physiological residual moments was also lowered (12.68 vs. 23.61% of peak moment for calibrated vs. uncalibrated models, respectively).</p><p><strong>Conclusion: </strong>The proposed method enables rapid calibration of upper-limb muscle parameters, improving accuracy in muscle force estimation and reducing dependence on residual moments.</p><p><strong>Significance: </strong>This approach provides a fast and reliable framework for upper-limb musculoskeletal calibration, facilitating more accurate and clinically applicable muscle force estimation.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147290030","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-24DOI: 10.1109/TBME.2026.3668134
Haley Mayer, Eran Shlomovitz, James Drake, Thomas Looi, Eric Diller
Objective: Endoscopic submucosal dissection (ESD) is a minimally-invasive method for removing gastrointestinal lesions. Adoption has been slow due to the procedure's technical difficulty, length of surgery, and lack of appropriate tools. Tissue traction is required to reduce the technical difficulty of ESD and ensure safe lesion removal. This paper presents the first ESD retraction device that is wireless, endoscope-independent, and provides adjustable traction force control.
Methods: The magnetic retraction device is 3.25 mm wide and 45 mm long. It is actuated wirelessly by a rotating permanent magnet held outside the abdomen. The device design is informed by a presented model of actuation, and we show characterization of the device actuation, validation of mechanical retraction, and clinical feasibility through an ex-vivo experiment.
Results: Experiments show that the device retracts 20 mm at 0.2 millimeters per second and generates a peak retraction force of 7.98 N and a four-peak average of 5.62 N at an external magnet-to-device distance of 55 mm. Ex-vivo testing with a gastric porcine model was performed with a dissection speed of 11.3 square centimeters per hour, 1.25 times faster than the reported international benchmark.
Conclusion: This enhanced tissue control would greatly improve patient clinical outcomes by expanding the use of ESD, shortening procedure times, minimizing complications, and potentially further expand its future medical applications.
Significance: This work grants surgeons improved tissue control throughout an ESD procedure, providing adequate visualization of the dissection plane, control independent of the flexible endoscope, and deployment anywhere along the gastrointestinal tract.
目的:内镜下粘膜下剥离术(ESD)是一种微创切除胃肠道病变的方法。由于手术的技术难度、手术时间长以及缺乏合适的工具,采用这种方法的速度很慢。需要组织牵引,以降低ESD的技术难度,确保安全切除病变。本文介绍了第一种无线、独立于内窥镜的ESD收放装置,并提供可调节的牵引力控制。方法:采用宽3.25 mm、长45 mm的磁收放装置。它由一个固定在腹部外的旋转永磁体无线驱动。该装置的设计是由一个提出的驱动模型提供的,我们通过离体实验展示了装置驱动的特征、机械回缩的验证和临床可行性。结果:实验表明,该器件以0.2 mm / s的速度收缩20 mm,在外部磁体与器件距离为55 mm时,产生的峰值收缩力为7.98 N,四峰平均收缩力为5.62 N。用胃猪模型进行离体实验,解剖速度为每小时11.3平方厘米,比国际标准快1.25倍。结论:通过扩大ESD的使用范围,缩短手术时间,减少并发症,增强组织控制,将极大地改善患者的临床结果,并有可能进一步扩大其未来的医疗应用。意义:本研究提高了外科医生在ESD手术过程中的组织控制能力,提供了足够的解剖平面可视化,不依赖于柔性内窥镜的控制,并且可以沿着胃肠道的任何地方部署。
{"title":"Tunable Magnetically Actuated Retraction Device for Improved Control During Endoscopic Tissue Manipulation.","authors":"Haley Mayer, Eran Shlomovitz, James Drake, Thomas Looi, Eric Diller","doi":"10.1109/TBME.2026.3668134","DOIUrl":"https://doi.org/10.1109/TBME.2026.3668134","url":null,"abstract":"<p><strong>Objective: </strong>Endoscopic submucosal dissection (ESD) is a minimally-invasive method for removing gastrointestinal lesions. Adoption has been slow due to the procedure's technical difficulty, length of surgery, and lack of appropriate tools. Tissue traction is required to reduce the technical difficulty of ESD and ensure safe lesion removal. This paper presents the first ESD retraction device that is wireless, endoscope-independent, and provides adjustable traction force control.</p><p><strong>Methods: </strong>The magnetic retraction device is 3.25 mm wide and 45 mm long. It is actuated wirelessly by a rotating permanent magnet held outside the abdomen. The device design is informed by a presented model of actuation, and we show characterization of the device actuation, validation of mechanical retraction, and clinical feasibility through an ex-vivo experiment.</p><p><strong>Results: </strong>Experiments show that the device retracts 20 mm at 0.2 millimeters per second and generates a peak retraction force of 7.98 N and a four-peak average of 5.62 N at an external magnet-to-device distance of 55 mm. Ex-vivo testing with a gastric porcine model was performed with a dissection speed of 11.3 square centimeters per hour, 1.25 times faster than the reported international benchmark.</p><p><strong>Conclusion: </strong>This enhanced tissue control would greatly improve patient clinical outcomes by expanding the use of ESD, shortening procedure times, minimizing complications, and potentially further expand its future medical applications.</p><p><strong>Significance: </strong>This work grants surgeons improved tissue control throughout an ESD procedure, providing adequate visualization of the dissection plane, control independent of the flexible endoscope, and deployment anywhere along the gastrointestinal tract.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147283488","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-23DOI: 10.1109/TBME.2026.3666306
Stefan Martin, Jakob Schattenfroh, Patrick Schuenke, Felix Frederik Zimmermann, Ingolf Sack, Christoph Kolbitsch, Andreas Kofler
Objective: Magnetic Resonance Elastography (MRE) is a non-invasive imaging technique for mapping biomechanical properties of in vivo tissue, including shear wave speed (SWS), but involves intrinsically slow data acquisition and an ill-posed wave inversion. Instead of relying on handcrafted image priors, we propose a data-driven approach jointly combining image reconstruction and MRE inversion for robust SWS estimation from undersampled k-space data.
Methods: Our physics-informed reconstruction framework comprises two blocks: a model-based neural network (NN)-regularized reconstruction module and a phase-gradient inversion (k-MDEV) calculating SWS from the reconstructed images. Concatenating both blocks yields an end-to-end trainable method to estimate SWS directly from measured k-space data. We evaluated the method on retrospectively highly undersampled brain MRE data and compared it to a total variation (TV) minimization-based approach. We assessed the impact of end-to-end training (qualitative images and SWS maps as targets) versus pre-training (qualitative images as targets) and applied the method also to in vivo data.
Results: Our approach significantly reduces NRMSE by 30% compared to TV. End-to-end training improves SWS estimation over separate image reconstruction and SWS calculation.
Conclusion: Accurate SWS quantification is possible at acceleration factors up to 19. Our method significantly outperforms TV, highlighting the need for data-driven regularization in this challenging MR problem. Further, our approach successfully generalizes to in vivo data.
Significance: We present the first end-to-end trainable MRE reconstruction method for estimating SWS maps directly from k-space. NN-based reconstruction can enable rapid stiffness mapping for dynamic studies, functional imaging, and real-time clinical feedback.
{"title":"Physics-Informed Deep Learning for Shear Wave Speed Estimation in MR Elastography.","authors":"Stefan Martin, Jakob Schattenfroh, Patrick Schuenke, Felix Frederik Zimmermann, Ingolf Sack, Christoph Kolbitsch, Andreas Kofler","doi":"10.1109/TBME.2026.3666306","DOIUrl":"https://doi.org/10.1109/TBME.2026.3666306","url":null,"abstract":"<p><strong>Objective: </strong>Magnetic Resonance Elastography (MRE) is a non-invasive imaging technique for mapping biomechanical properties of in vivo tissue, including shear wave speed (SWS), but involves intrinsically slow data acquisition and an ill-posed wave inversion. Instead of relying on handcrafted image priors, we propose a data-driven approach jointly combining image reconstruction and MRE inversion for robust SWS estimation from undersampled k-space data.</p><p><strong>Methods: </strong>Our physics-informed reconstruction framework comprises two blocks: a model-based neural network (NN)-regularized reconstruction module and a phase-gradient inversion (k-MDEV) calculating SWS from the reconstructed images. Concatenating both blocks yields an end-to-end trainable method to estimate SWS directly from measured k-space data. We evaluated the method on retrospectively highly undersampled brain MRE data and compared it to a total variation (TV) minimization-based approach. We assessed the impact of end-to-end training (qualitative images and SWS maps as targets) versus pre-training (qualitative images as targets) and applied the method also to in vivo data.</p><p><strong>Results: </strong>Our approach significantly reduces NRMSE by 30% compared to TV. End-to-end training improves SWS estimation over separate image reconstruction and SWS calculation.</p><p><strong>Conclusion: </strong>Accurate SWS quantification is possible at acceleration factors up to 19. Our method significantly outperforms TV, highlighting the need for data-driven regularization in this challenging MR problem. Further, our approach successfully generalizes to in vivo data.</p><p><strong>Significance: </strong>We present the first end-to-end trainable MRE reconstruction method for estimating SWS maps directly from k-space. NN-based reconstruction can enable rapid stiffness mapping for dynamic studies, functional imaging, and real-time clinical feedback.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"147276229","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-19DOI: 10.1109/TBME.2026.3666460
Saman Khazaei, Jingyang Gong, Rose T Faghih
Objective: Human cognitive functions are linked to hidden cognitive states, i.e., arousal and performance. The Yerkes-Dodson law suggests an inverted-U link between these two states, and they may need to be decoded concurrently. However, conventional decoders decode these states separately without including their non-linear interplay.
Methods: We develop a concurrent arousal-performance (CAP) decoder using a Bayesian state-space framework that accounts for their psychological link. The correctness of response and arousal events are binary data to be linked to performance and arousal states, respectively. The reaction time is a continuous observation jointly linked to both states via a quadratic function. We evaluate the framework on simulated data and two experimental datasets. Specifically, data acquired on subjects performing 1-back and 3-back memory tasks during which they are elicited by relaxing, exiting, and AI-generated relaxing music, as well as by smell fragrance and intake coffee are used.
Results: The CAP decoder outperforms the previously developed decoder in reflecting the inverted-quadratic arousal-performance link, suggesting the presence of the Yerkes-Dodson law. The decoded arousal state peaks during an exciting music session, while the decoded performance state is aligned with the task difficulty.
Conclusion: The developed framework reliably decodes the hidden arousal and performance and reveals their link.
Significance: This research advances the safe personalized intervention design.
{"title":"Decoder Design for Concurrent Estimation of Arousal and Performance from One Continuous and Two Binary Observations.","authors":"Saman Khazaei, Jingyang Gong, Rose T Faghih","doi":"10.1109/TBME.2026.3666460","DOIUrl":"https://doi.org/10.1109/TBME.2026.3666460","url":null,"abstract":"<p><strong>Objective: </strong>Human cognitive functions are linked to hidden cognitive states, i.e., arousal and performance. The Yerkes-Dodson law suggests an inverted-U link between these two states, and they may need to be decoded concurrently. However, conventional decoders decode these states separately without including their non-linear interplay.</p><p><strong>Methods: </strong>We develop a concurrent arousal-performance (CAP) decoder using a Bayesian state-space framework that accounts for their psychological link. The correctness of response and arousal events are binary data to be linked to performance and arousal states, respectively. The reaction time is a continuous observation jointly linked to both states via a quadratic function. We evaluate the framework on simulated data and two experimental datasets. Specifically, data acquired on subjects performing 1-back and 3-back memory tasks during which they are elicited by relaxing, exiting, and AI-generated relaxing music, as well as by smell fragrance and intake coffee are used.</p><p><strong>Results: </strong>The CAP decoder outperforms the previously developed decoder in reflecting the inverted-quadratic arousal-performance link, suggesting the presence of the Yerkes-Dodson law. The decoded arousal state peaks during an exciting music session, while the decoded performance state is aligned with the task difficulty.</p><p><strong>Conclusion: </strong>The developed framework reliably decodes the hidden arousal and performance and reveals their link.</p><p><strong>Significance: </strong>This research advances the safe personalized intervention design.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146226585","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-17DOI: 10.1109/TBME.2026.3665589
Xinlei Zhang, Fan Li, Yuguang Fang, Lizhen Zhong, Kang Ding, Haiyuan Chen, Fengyu Cong
Objective: The Apnea-Hypopnea Index (AHI) serves as the primary metric for Obstructive Sleep Apnea (OSA) severity but quantifies only event frequency, lacking critical information on the slope and temporal morphology of oxygen desaturation.
Methods: To quantify the desaturation and reoxygenation dynamics during apneic episodes across sleep stages, we develop a geometric modeling framework to extract three groups of event-based features from individual desaturation events: Event Falling Rate (EFR), Event Recovery Rate (ERR), and Event Baseline Shift (EBS). Using 800 polysomnography recordings from the Sleep Heart Health Study, these features are evaluated against and integrated with established oximetry indices using machine learning classifiers.
Results: Spearman correlation analysis reveals significant associations between the proposed event-based features and OSA severity (p < 0.001). The integrated model achieved accuracies of 88% (binary), 76% (three-class), and 72% (four-class). Notably, SHAP interpretability analysis identified EFR and ERR as top-ranking event-based features in OSA stratification, outperforming several traditional global metrics.
Conclusion: The proposed event-based features capture the rate and stability of hypoxic transitions, providing subtle diagnostic information complementary to AHI.
Significance: This framework offers interpretable, physiologically grounded features that enhance OSA stratification and phenotyping using accessible pulse oximetry, facilitating personalized OSA health assessment.
{"title":"Novel Event-Based Peripheral Oxygen Saturation Metrics Provide Complementary Information for OSA Classification.","authors":"Xinlei Zhang, Fan Li, Yuguang Fang, Lizhen Zhong, Kang Ding, Haiyuan Chen, Fengyu Cong","doi":"10.1109/TBME.2026.3665589","DOIUrl":"https://doi.org/10.1109/TBME.2026.3665589","url":null,"abstract":"<p><strong>Objective: </strong>The Apnea-Hypopnea Index (AHI) serves as the primary metric for Obstructive Sleep Apnea (OSA) severity but quantifies only event frequency, lacking critical information on the slope and temporal morphology of oxygen desaturation.</p><p><strong>Methods: </strong>To quantify the desaturation and reoxygenation dynamics during apneic episodes across sleep stages, we develop a geometric modeling framework to extract three groups of event-based features from individual desaturation events: Event Falling Rate (EFR), Event Recovery Rate (ERR), and Event Baseline Shift (EBS). Using 800 polysomnography recordings from the Sleep Heart Health Study, these features are evaluated against and integrated with established oximetry indices using machine learning classifiers.</p><p><strong>Results: </strong>Spearman correlation analysis reveals significant associations between the proposed event-based features and OSA severity (p < 0.001). The integrated model achieved accuracies of 88% (binary), 76% (three-class), and 72% (four-class). Notably, SHAP interpretability analysis identified EFR and ERR as top-ranking event-based features in OSA stratification, outperforming several traditional global metrics.</p><p><strong>Conclusion: </strong>The proposed event-based features capture the rate and stability of hypoxic transitions, providing subtle diagnostic information complementary to AHI.</p><p><strong>Significance: </strong>This framework offers interpretable, physiologically grounded features that enhance OSA stratification and phenotyping using accessible pulse oximetry, facilitating personalized OSA health assessment.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146213140","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2026-02-13DOI: 10.1109/TBME.2026.3660466
Philipp Krondorfer, Djordje Slijepcevic, Andreas Kranzl, Matthias Zeppelzauer, Brian Horsak
Human gait analysis quantifies locomotion and assesses gait performance, particularly for patients with musculoskeletal disorders. While instrumented 3D gait analysis is the gold standard, advancements in physics based musculoskeletal modeling offer deeper insights into body mechanics. However, its complexity and resource demands limit clinical use, prompting interest in machine learning (ML) as a surrogate for traditional simulations. This scoping review synthesizes ML approaches for estimating joint contact forces in the lower extremities. A systematic search was conducted according to PRISMA-ScR guidelines, covering English language publications from January 2014 to August 2024 across PubMed, IEEE Xplore, Scopus, and SpringerLink. Studies were eligible if they applied ML techniques to estimate lower extremity joint contact forces in human participants and provided sufficient methodological details. Data extraction used a standardized charting form capturing study populations, movement types, input data, ML methods, validation procedures, and performance metrics. 27 studies met the inclusion criteria. The studies showed variability in populations, movement types, input data, ML methods, validation procedures, and performance metrics. Small datasets, often underrepresenting females, limit model generalizability. Inconsistencies in validation approaches and performance metrics, along with the lack of published data and code, hinder reproducibility and comparability. Despite challenges, ML models show potential in accurately predicting joint contact loads and forces. Future research should focus on expanding and diversifying datasets, standardizing methodologies, embracing open science practices, and integrating physics-informed approaches to enhance clinical applicability.
{"title":"A Scoping Review of Machine Learning Approaches for Predicting Lower Extremity Joint Contact Loads: Current Trends, Common Pitfalls and Future Directions.","authors":"Philipp Krondorfer, Djordje Slijepcevic, Andreas Kranzl, Matthias Zeppelzauer, Brian Horsak","doi":"10.1109/TBME.2026.3660466","DOIUrl":"https://doi.org/10.1109/TBME.2026.3660466","url":null,"abstract":"<p><p>Human gait analysis quantifies locomotion and assesses gait performance, particularly for patients with musculoskeletal disorders. While instrumented 3D gait analysis is the gold standard, advancements in physics based musculoskeletal modeling offer deeper insights into body mechanics. However, its complexity and resource demands limit clinical use, prompting interest in machine learning (ML) as a surrogate for traditional simulations. This scoping review synthesizes ML approaches for estimating joint contact forces in the lower extremities. A systematic search was conducted according to PRISMA-ScR guidelines, covering English language publications from January 2014 to August 2024 across PubMed, IEEE Xplore, Scopus, and SpringerLink. Studies were eligible if they applied ML techniques to estimate lower extremity joint contact forces in human participants and provided sufficient methodological details. Data extraction used a standardized charting form capturing study populations, movement types, input data, ML methods, validation procedures, and performance metrics. 27 studies met the inclusion criteria. The studies showed variability in populations, movement types, input data, ML methods, validation procedures, and performance metrics. Small datasets, often underrepresenting females, limit model generalizability. Inconsistencies in validation approaches and performance metrics, along with the lack of published data and code, hinder reproducibility and comparability. Despite challenges, ML models show potential in accurately predicting joint contact loads and forces. Future research should focus on expanding and diversifying datasets, standardizing methodologies, embracing open science practices, and integrating physics-informed approaches to enhance clinical applicability.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146194717","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Breast cancer is a malignant disease, and patient prognosis significantly improves when detected at an early stage. Therefore, various advanced chemiresistive sensors have been adopted to detect Volatile Organic Compounds (VOCs), which are byproducts of cellular metabolism exhaled in breath, for early breast cancer detection. In this work, gold nanoflowers (AuNFs) with a high surface area to volume ratio and a face centered cubic (FCC) crystalline structure of 203 $nm$ were synthesized, as confirmed by X-ray diffraction (XRD) and High resolution scanning electron microscopy (HRSEM). After dispersion in deionized (DI) water, the AuNFs were drop coated onto interdigital elliptical aluminum electrodes patterned on glass substrates, forming a continuous film (neighboring AuNFs closely packed) with an initial resistance of up to 2 $mathit {KOmega }$. The AuNFs films were then functionalized with phenylethyl mercaptan and 2-methyl-1-propanethiol using a simple and controllable drop coating method offering an advantage over conventional ligand ion exchange techniques. The large electrode spacing significantly reduces noise compared to traditional low spacing gold electrodes, which require costly photolithography. Furthermore, thiolation enhances both sensitivity and selectivity. The sensors exhibited very high sensitivity, attributed to the high conductivity of the AuNFs films and the sharp petal like active sites promoting strong VOC interactions. To the best of the authors' knowledge, this is the first report demonstrating high sensitivity for breast cancer related VOCs using aluminum electrodes on a glass substrate.
{"title":"Gold Nanoflowers Sensitivity and Selectivity Improvement by Thiolation to Detect Breast Cancer Volatile Organic Compound Biomarkers.","authors":"Malkari Sravani, Aniruddh Bahadur Yadav, Rahul Checker","doi":"10.1109/TBME.2026.3664501","DOIUrl":"https://doi.org/10.1109/TBME.2026.3664501","url":null,"abstract":"<p><p>Breast cancer is a malignant disease, and patient prognosis significantly improves when detected at an early stage. Therefore, various advanced chemiresistive sensors have been adopted to detect Volatile Organic Compounds (VOCs), which are byproducts of cellular metabolism exhaled in breath, for early breast cancer detection. In this work, gold nanoflowers (AuNFs) with a high surface area to volume ratio and a face centered cubic (FCC) crystalline structure of 203 $nm$ were synthesized, as confirmed by X-ray diffraction (XRD) and High resolution scanning electron microscopy (HRSEM). After dispersion in deionized (DI) water, the AuNFs were drop coated onto interdigital elliptical aluminum electrodes patterned on glass substrates, forming a continuous film (neighboring AuNFs closely packed) with an initial resistance of up to 2 $mathit {KOmega }$. The AuNFs films were then functionalized with phenylethyl mercaptan and 2-methyl-1-propanethiol using a simple and controllable drop coating method offering an advantage over conventional ligand ion exchange techniques. The large electrode spacing significantly reduces noise compared to traditional low spacing gold electrodes, which require costly photolithography. Furthermore, thiolation enhances both sensitivity and selectivity. The sensors exhibited very high sensitivity, attributed to the high conductivity of the AuNFs films and the sharp petal like active sites promoting strong VOC interactions. To the best of the authors' knowledge, this is the first report demonstrating high sensitivity for breast cancer related VOCs using aluminum electrodes on a glass substrate.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146194632","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Objective: This paper aims to reduce human-exoskeleton knee joint misalignment arising from the nonuniform and subject-specific motion of the tibiofemoral joint, thereby improving kinematic compatibility between the user and the exoskeleton.
Methods: A bioinspired gear-based knee exoskeleton is proposed, featuring a planetary gear mechanism that approximates the physiological rolling behavior of the human knee and a three-stage gear compensatory transmission that accommodates residual sliding-induced mismatch. A virtual human-exoskeleton interaction model based on sliding misalignment metric was developed to quantify kinematic misalignment and guide gear-parameter optimization. The proposed design was evaluated through numerical simulations, prototype implementation, human-subject experiments, and bench tests to characterize kinematic consistency and drive performance.
Results: Relative to a single-axis knee joint, the proposed mechanism reduced knee joint misalignment by approximately 70%. Torque transmission tests conducted on a mechanically decoupled platform showed close agreement between commanded and measured output torques, with peak deviations of approximately 8%-15% during extension and 5%-13% during flexion. Back-drivability characterization further indicated low passive resistance, with back-driving torque accounting for less than 5% of the rated assistive torque.
Conclusion: The proposed gear-based knee joint enables anatomical motion approximation and internal misalignment accommodation while maintaining reliable torque transmission within a deterministic kinematic structure.
Significance: This work provides a generalizable mechanical and modeling framework for addressing knee joint misalignment in wearable exoskeletons and supports the development of systems with improved human-robot kinematic compatibility.
{"title":"A Bioinspired Gear-Rolling Knee Exoskeleton for Enhanced Human-Exoskeleton Kinematic Compatibility.","authors":"Hui Li, Ruilin Liu, Jiahao Du, Shengli Luo, Duojin Wang, Hongliu Yu","doi":"10.1109/TBME.2026.3664052","DOIUrl":"https://doi.org/10.1109/TBME.2026.3664052","url":null,"abstract":"<p><strong>Objective: </strong>This paper aims to reduce human-exoskeleton knee joint misalignment arising from the nonuniform and subject-specific motion of the tibiofemoral joint, thereby improving kinematic compatibility between the user and the exoskeleton.</p><p><strong>Methods: </strong>A bioinspired gear-based knee exoskeleton is proposed, featuring a planetary gear mechanism that approximates the physiological rolling behavior of the human knee and a three-stage gear compensatory transmission that accommodates residual sliding-induced mismatch. A virtual human-exoskeleton interaction model based on sliding misalignment metric was developed to quantify kinematic misalignment and guide gear-parameter optimization. The proposed design was evaluated through numerical simulations, prototype implementation, human-subject experiments, and bench tests to characterize kinematic consistency and drive performance.</p><p><strong>Results: </strong>Relative to a single-axis knee joint, the proposed mechanism reduced knee joint misalignment by approximately 70%. Torque transmission tests conducted on a mechanically decoupled platform showed close agreement between commanded and measured output torques, with peak deviations of approximately 8%-15% during extension and 5%-13% during flexion. Back-drivability characterization further indicated low passive resistance, with back-driving torque accounting for less than 5% of the rated assistive torque.</p><p><strong>Conclusion: </strong>The proposed gear-based knee joint enables anatomical motion approximation and internal misalignment accommodation while maintaining reliable torque transmission within a deterministic kinematic structure.</p><p><strong>Significance: </strong>This work provides a generalizable mechanical and modeling framework for addressing knee joint misalignment in wearable exoskeletons and supports the development of systems with improved human-robot kinematic compatibility.</p>","PeriodicalId":13245,"journal":{"name":"IEEE Transactions on Biomedical Engineering","volume":"PP ","pages":""},"PeriodicalIF":4.5,"publicationDate":"2026-02-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146179404","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}