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IEEE Transactions on Biomedical Engineering Information for Authors IEEE 生物医学工程论文集 作者须知
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-25 DOI: 10.1109/TBME.2024.3462313
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引用次数: 0
Modeling Patient-specific Apnea-bradycardia Patterns in Preterm Newborn. 早产新生儿特定呼吸暂停-心动过缓模式建模
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-25 DOI: 10.1109/TBME.2024.3486580
Orlane Duport, Virginie Le Rolle, Gustavo Guerrero, Alain Beuchee, Alfredo Hernandez

Objective: Preterm infants are particularly exposed to severe cardio-respiratory events, associating apnea with bradycardia and oxygen desaturation. A patient-specific and event-specific model-based approach is proposed in this work to analyze the acute heart rate response to apnea-bradycardia events in preterm newborn.

Methods: A novel model integrating the main cardio-respiratory interactions which are specific to the neonatal period is proposed. An evolutionary algorithm is applied to estimate patient-specific model parameters from a database of 37 apnea-bradycardia episodes acquired from 10 preterm newborns. Unsupervised clustering (K-means) was applied to the identified parameters to define phenogroups of cardio-respiratory responses to apnea.

Results: A significant correspondence was observed between simulated and experimental heart rate series in all identifications (median RMSE = 8.85 bpm). Three clusters of parameters were found and were associated to three different pathophysiological dynamics related to apnea-bradycardia.

Conclusion and significance: The proposed method, based on patient and event-specific model parameter identification, provides a novel approach to characterize bradycardia dynamics in response to apnea, opening the way to the proposal of new personalized diagnosis and treatment possibilities in this particularly sensitive population.

目的:早产儿尤其容易发生严重的心肺事件,呼吸暂停与心动过缓和氧饱和度降低相关联。本研究提出了一种基于特定患者和特定事件模型的方法,用于分析早产新生儿对呼吸暂停-心动过缓事件的急性心率反应:方法:本文提出了一种新型模型,该模型整合了新生儿期特有的主要心肺相互作用。应用进化算法从 10 名早产新生儿的 37 次呼吸暂停-心动过缓数据库中估算出患者特定的模型参数。对确定的参数进行无监督聚类(K-means),以确定呼吸暂停时心肺反应的表型组:在所有识别结果中,模拟心率序列与实验心率序列之间存在明显的对应关系(中位数 RMSE = 8.85 bpm)。发现了三个参数集群,它们与呼吸暂停-心动过缓的三种不同病理生理动态有关:所提出的方法以患者和特定事件模型参数识别为基础,为描述呼吸暂停时的心动过缓动态提供了一种新方法,为这一特别敏感人群提出新的个性化诊断和治疗方案开辟了道路。
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引用次数: 0
IEEE Transactions on Biomedical Engineering Handling Editors Information 电气和电子工程师学会《生物医学工程论文集》处理编辑信息
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-25 DOI: 10.1109/TBME.2024.3462315
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引用次数: 0
IEEE Engineering in Medicine and Biology Society Information IEEE 医学与生物学工程学会信息
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-25 DOI: 10.1109/TBME.2024.3462311
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引用次数: 0
A New Multi-mode, High Pressure Portable Transcranial Ultrasound Stimulation System. 新型多模式、高压便携式经颅超声波刺激系统
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-25 DOI: 10.1109/TBME.2024.3486748
Zhiwei Li, Zhengxuan Zhou, Xiaoyu Zhang, Yulin Wang, Hanwen Wang, Yingwei Li, Xiaoli Li

Objective: Transcranial ultrasound stimulation (TUS) is a promising non-invasive neuromodulation method for brain disorders. Commonly-used TUS systems in research include custom-built and commercial devices. Custom-built devices typically consist of traditional function generator, power amplifier, and ultrasound transducer. Due to cumbersome wiring and absence of dedicated control software, the operation of these devices is inconvenient. Commercial devices often have limited waveform modes and cannot perform ultrasound modulation with complex waveforms. These limitations limit the application of TUS technology by ordinary users. Therefore, we propose a portable TUS system with multiple modes and high acoustic pressure.

Methods: The proposed portable TUS system utilizes a high-power multi-mode stimulator, and an ultrasound transducer with impedance matching module to achieve multiple modes and high acoustic pressure ultrasound neuromodulation.

Results: The stimulator can output four types of waveforms: continuous pulse continuous stimulus (CPCS), intermittent pulse continuous stimulus (IPCS), continuous pulse intermittent stimulus (CPIS), and intermittent pulse intermittent stimulus (IPIS). When using a same transducer, it generates a peak negative pressure that is nearly identical to one produced by a commercial device. And compared to commercial transducer, the peak negative pressure of our transducer is significantly higher, reaching a maximum of 0.95 MPa.

Conclusion: In-vitro experiments were conducted using rat hippocampal brain slices. The experimental results demonstrated the effectiveness of the TUS system for neural stimulation.

Significance: It offers a design method of a portable multi-mode, high pressure TUS system, which is used for complex neural modulation research.

目的:经颅超声刺激(TUS)是一种治疗脑部疾病的前景广阔的非侵入性神经调节方法。研究中常用的 TUS 系统包括定制设备和商用设备。定制设备通常由传统的函数发生器、功率放大器和超声换能器组成。由于接线繁琐且没有专用的控制软件,这些设备的操作很不方便。商用设备通常只有有限的波形模式,无法进行复杂波形的超声调制。这些局限性限制了普通用户对 TUS 技术的应用。因此,我们提出了一种具有多种模式和高声压的便携式 TUS 系统:方法:所提出的便携式 TUS 系统利用大功率多模式刺激器和带阻抗匹配模块的超声换能器来实现多模式和高声压超声神经调制:该刺激器可输出四种波形:连续脉冲连续刺激(CPCS)、间歇脉冲连续刺激(IPCS)、连续脉冲间歇刺激(CPIS)和间歇脉冲间歇刺激(IPIS)。当使用相同的传感器时,它产生的负压峰值与商用设备产生的负压峰值几乎相同。与商用传感器相比,我们的传感器产生的峰值负压明显更高,最大可达 0.95 兆帕:结论:我们使用大鼠海马脑片进行了体外实验。实验结果证明了 TUS 系统对神经刺激的有效性:意义:提供了一种用于复杂神经调控研究的便携式多模式高压 TUS 系统的设计方法。
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引用次数: 0
PET mapping of receptor occupancy using joint direct parametric reconstruction. 利用联合直接参数重构技术绘制受体占位 PET 图。
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-24 DOI: 10.1109/TBME.2024.3486191
Thibault Marin, Vasily Belov, Yanis Chemli, Jinsong Ouyang, Yassir Najmaoui, Georges El Fakhri, Sridhar Duvvuri, Philip Iredale, Nicolas J Guehl, Marc D Normandin, Yoann Petibon

Receptor occupancy (RO) studies using PET neuroimaging play a critical role in the development of drugs targeting the central nervous system (CNS). The conventional approach to estimate drug receptor occupancy consists in estimation of binding potential changes between two PET scans (baseline and post-drug injection). This estimation is typically performed separately for each scan by first reconstructing dynamic PET scan data before fitting a kinetic model to time activity curves. This approach fails to properly model the noise in PET measurements, resulting in poor RO estimates, especially in low receptor density regions.

Objective: In this work, we evaluate a novel joint direct parametric reconstruction framework to directly estimate distributions of RO and other kinetic parameters in the brain from a pair of baseline and postdrug injection dynamic PET scans.

Methods: The proposed method combines the use of regularization on RO maps with alternating optimization to enable estimation of occupancy even in low binding regions.

Results: Simulation results demonstrate the quantitative improvement of this method over conventional approaches in terms of accuracy and precision of occupancy. The proposed method is also evaluated in preclinical in-vivo experiments using 11C-MK6884 and a muscarinic acetylcholine receptor 4 positive allosteric modulator drug, showing improved estimation of receptor occupancy as compared to traditional estimators.

Conclusion: The proposed joint direct estimation framework improves RO estimation compared to conventional methods, especially in intermediate to low-binding regions.

Significance: This work could potentially facilitate the evaluation of new drug candidates targeting the CNS.

利用 PET 神经成像技术进行的受体占位(RO)研究在开发针对中枢神经系统(CNS)的药物方面发挥着至关重要的作用。估算药物受体占据率的传统方法包括估算两次 PET 扫描(基线扫描和药物注射后扫描)之间的结合电位变化。这种估算通常是通过首先重建动态 PET 扫描数据,然后将动力学模型拟合到时间活动曲线上,从而分别对每次扫描进行估算。这种方法无法正确模拟 PET 测量中的噪声,导致 RO 估计结果不佳,尤其是在低受体密度区域:在这项工作中,我们评估了一种新颖的联合直接参数重建框架,该框架可直接从一对基线和药物注射后动态 PET 扫描中估算大脑中 RO 和其他动力学参数的分布:方法:所提出的方法将RO图的正则化与交替优化相结合,即使在低结合区域也能估计占据率:模拟结果表明,与传统方法相比,该方法在占据率的准确性和精确性方面有了定量改进。在使用 11C-MK6884 和毒蕈碱乙酰胆碱受体 4 阳性异位调节剂药物进行的临床前体内实验中,也对所提出的方法进行了评估,结果表明与传统估计方法相比,受体占据率的估计有所改进:结论:与传统方法相比,拟议的联合直接估算框架改进了受体占有率估算,尤其是在中低结合区域:意义:这项工作可能有助于评估以中枢神经系统为靶点的候选新药。
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引用次数: 0
A Task-driven Adversarial Channel Selection Method for Binary Classification Based on Magnetocardiography. 基于磁心动图的二元分类任务驱动对抗信道选择法
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-24 DOI: 10.1109/TBME.2024.3486119
Chong Ma, Jiaojiao Pang, Ruizhe Wang, Dong Xu, Min Xiang, Zhuo Wang

As the number of sensors in magnetocardiography (MCG) arrays increases to capture detailed cardiac activity, some channels contribute minimally to task performance, resulting in data redundancy and resource consumption. Although existing methods can reduce the number of channels required to meet task demands, they often struggle to balance computational time and the accuracy of the selected channels and overlook the scalability of the selected channels. This limitation means that when environmental conditions change, or when sensors malfunction, redesigning channel configurations becomes necessary, which increases experimental uncertainties. This study introduces a task-driven adversarial channel selection method tailored for binary classification of MCG signals. The optimal channel combination is determined through a group-wise search using a heuristic algorithm, whose objective function is designed to maximize the difference between the classification accuracy and cosine similarity of the selected channel. In evaluations using an MCG dataset from Qilu Hospital of Shandong University, the proposed method successfully reduced the number of channels from 36 to 5 without compromising classification performance. Furthermore, it outperforms existing hybrid sequential forward search method by achieving comparable accuracy with fewer channels, while also demonstrating superior scalability compared to both hybrid sequential forward search and pearson-rank methods. This approach strikes a balance between computational consumption and accuracy, while improving the scalability of the selected channel combinations, enhancing the efficiency and practicality of the MCG system.

随着磁心动图(MCG)阵列中用于捕捉详细心脏活动的传感器数量的增加,一些通道对任务性能的贡献微乎其微,从而导致数据冗余和资源消耗。虽然现有方法可以减少所需的通道数量以满足任务需求,但它们往往难以在计算时间和所选通道的准确性之间取得平衡,并且忽略了所选通道的可扩展性。这种局限性意味着当环境条件发生变化或传感器出现故障时,必须重新设计通道配置,从而增加了实验的不确定性。本研究针对 MCG 信号的二进制分类,介绍了一种任务驱动的对抗信道选择方法。通过使用启发式算法进行分组搜索来确定最佳信道组合,其目标函数旨在最大化分类准确性与所选信道余弦相似度之间的差值。在使用山东大学齐鲁医院的 MCG 数据集进行的评估中,所提出的方法成功地将通道数从 36 个减少到 5 个,而不会影响分类性能。此外,该方法还优于现有的混合顺序前向搜索方法,用更少的通道获得了相当高的准确率,同时与混合顺序前向搜索方法和皮尔森秩方法相比,还表现出了更优越的可扩展性。这种方法在计算消耗和准确性之间取得了平衡,同时提高了所选信道组合的可扩展性,增强了 MCG 系统的效率和实用性。
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引用次数: 0
Robust Myocardial Perfusion MRI Quantification with DeepFermi. 利用 DeepFermi 进行可靠的心肌灌注 MRI 定量。
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-23 DOI: 10.1109/TBME.2024.3485233
Sherine Brahma, Andreas Kofler, Felix F Zimmermann, Tobias Schaeffter, Amedeo Chiribiri, Christoph Kolbitsch

Stress perfusion cardiac magnetic resonance is an important technique for examining and assessing the blood supply of the myocardium. Currently, the majority of clinical perfusion scans are evaluated based on visual assessment by experienced clinicians. This makes the process subjective, and to this end, quantitative methods have been proposed to offer a more user-independent assessment of perfusion. These methods, however, rely on time-consuming deconvolution analysis and are susceptible to data outliers caused by artifacts due to cardiac or respiratory motion. In our work, we introduce a novel deep-learning method that integrates the commonly used Fermi function with a neural network architecture for fast, accurate, and robust myocardial perfusion quantification. This approach employs the Fermi model to ensure that the perfusion maps are consistent with measured data, while also utilizing a prior based on a 3D convolutional neural network to generalize spatio-temporal information across different patient data. Our network is trained within a self-supervised learning framework, which circumvents the need for ground-truth perfusion labels that are challenging to obtain. Furthermore, we extended this training methodology by adopting a technique that ensures estimations are resistant to data outliers, thereby improving robustness against motion artifacts. Our simulation experiments demonstrated an overall improvement in the accuracy and robustness of perfusion parameter estimation, consistently outperforming traditional deconvolution analysis algorithms across varying Signal-to-Noise Ratio scenarios in the presence of data outliers. For the in vivo studies, our method generated robust perfusion estimates that aligned with clinical diagnoses, while being approximately five times faster than conventional algorithms.

应激灌注心脏磁共振是检查和评估心肌供血的一项重要技术。目前,大多数临床灌注扫描都是由经验丰富的临床医生通过目测进行评估。这使得评估过程变得主观,为此,有人提出了定量方法,以提供更独立于用户的灌注评估。然而,这些方法依赖于耗时的解卷积分析,而且容易受到心脏或呼吸运动造成的伪影导致的数据异常值的影响。在我们的工作中,我们引入了一种新型深度学习方法,它将常用的费米函数与神经网络架构相结合,实现了快速、准确和稳健的心肌灌注量化。这种方法利用费米模型确保灌注图与测量数据一致,同时还利用基于三维卷积神经网络的先验来概括不同患者数据的时空信息。我们的网络是在自我监督学习框架内进行训练的,从而避免了对难以获得的地面实况灌注标签的需求。此外,我们还扩展了这种训练方法,采用了一种技术来确保估算结果不受数据异常值的影响,从而提高了对运动伪影的鲁棒性。我们的模拟实验表明,灌注参数估计的准确性和鲁棒性得到了全面提高,在存在数据异常值的不同信噪比情况下,始终优于传统的去卷积分析算法。在活体研究中,我们的方法生成了与临床诊断一致的可靠灌注估计值,同时比传统算法快约五倍。
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引用次数: 0
Computational Fluid Dynamic Simulation of the Cerebral Venous System in Multiple Sclerosis and Control Patients: Are Hemodynamic Variances Evident in Multiple Sclerosis? 多发性硬化症和对照组患者脑静脉系统的计算流体动力学模拟:多发性硬化症患者的血流动力学变化明显吗?
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-23 DOI: 10.1109/TBME.2024.3485019
Alexander Robert Bateman, Jeannette Lechner-Scott, Grant Alexander Bateman, Saadallah Ramadan, Tracie Barber

Objective: An investigation was performed to determine the relevant hemodynamic parameters which could help assess vascular pathology in human diseases. Using these parameters, this study aims to assess if there are any hemodynamic differences in the cerebral veins of multiple sclerosis (MS) patients and controls which could impact the etiology of MS.

Methods: 40 MS participants and 20 controls were recruited for this study. Magnetic resonance imaging (MRI) was performed to enable 3D geometries of the anatomy and the blood flow rates at the boundaries to be computed. Computational fluid dynamics (CFD) models were created for each participant and simulated using patient-specific boundary conditions.

Results: The pressure drop and vascular resistance did not significantly differ between the groups. The internal jugular vein (IJV) cross-sectional area was larger in the MS group (Right IJV: p = 0.04, Left IJV: p = 0.02) and the straight sinus (ST) flow rate was higher in MS across all ages (p = 0.005) compared to controls. Vascular resistance was shown to indicate regions in the cerebral veins which could correspond to increased venous pressure. Conclusion & Significance: This study shows that the pressure and vascular resistance of the cerebral veins are unlikely to be directly related to the etiology of MS. The finding of higher ST flow could correspond to increased inflammation in the deep venous system. Resistance as a measure of vascular pathology shows promise and could be useful to holistically investigate blood flow hemodynamics in a variety of other diseases of the circulatory system.

目的一项调查旨在确定有助于评估人类疾病血管病理学的相关血液动力学参数。利用这些参数,本研究旨在评估多发性硬化症(MS)患者和对照组的脑静脉是否存在可能影响 MS 病因的血液动力学差异。进行磁共振成像(MRI),以计算解剖结构的三维几何图形和边界处的血流速度。为每位参与者创建了计算流体动力学(CFD)模型,并使用患者特定的边界条件进行模拟:结果:各组之间的压降和血管阻力没有明显差异。与对照组相比,多发性硬化症组的颈内静脉(IJV)横截面积较大(右颈内静脉:p = 0.04,左颈内静脉:p = 0.02),所有年龄段的多发性硬化症患者的直窦(ST)流速较高(p = 0.005)。血管阻力显示了脑静脉中可能与静脉压力增加相对应的区域。结论和意义:本研究表明,脑静脉的压力和血管阻力不太可能与多发性硬化症的病因直接相关。ST血流较高的发现可能与深静脉系统炎症加重相对应。阻力作为血管病理学的一种测量方法前景广阔,可用于全面研究循环系统各种其他疾病的血流血流动力学。
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引用次数: 0
Flow-controlled air-jet for in vivo quasi steady-state and dynamic elastography with MHz optical coherence tomography. 利用 MHz 光学相干断层扫描技术进行体内准稳态和动态弹性成像的流量控制空气喷射器。
IF 4.4 2区 医学 Q2 ENGINEERING, BIOMEDICAL Pub Date : 2024-10-22 DOI: 10.1109/TBME.2024.3484676
Nicolas Detrez, Sazgar Burhan, Katarina Rewerts, Jessica Kren, Steffen Buschschluter, Dirk Theisen-Kunde, Matteo Mario Bonsanto, Robert Huber, Ralf Brinkmann

Objective: Optical coherence elastography (OCE) has been introduced for several medical applications to determine tissue mechanical parameters. However, in order to measure sensitive healthy tissue like brain in vivo, the excitation force needs to be carefully controlled and as low as possible (under 100 μN). Preferably, the excitation should be applied in a non-contact manner.

Methods: In this work, an air-jet excitation source for this specific purpose has been developed and characterized. The design focus was set on the exact measurement and control of the generated excitation force to better comply with in vivo medical safety requirements during surgery.

Results: Therefore, an excitation force control and measurement system based on the applied gas flow was developed.

Conclusion: This system can generate short, high dynamic air-puffs lasting fewer than 5 ms, as well as quasi-static excitation forces lasting 700 ms. The force range covers 1μN to 40 mN with a force error margin between 0.1% and 16% in the relevant range. The excitation source, in conjunction with a 3.2 MHz optical coherence system, enables phase-based, dynamic, and quasi steady-state elastography, as well as robust non-contact classical indentation measurements.

Significance: The presented system is a preliminary prototype intended for further development into a clinical version to be used in situ during brain tumor surgery.

目的:光学相干弹性成像(OCE)已被引入多项医疗应用,用于确定组织的机械参数。然而,为了测量体内敏感的健康组织(如大脑),需要仔细控制激振力并尽可能低(低于 100 μN)。激励最好以非接触方式进行:方法:在这项工作中,我们开发并鉴定了用于这一特定目的的空气喷射激励源。设计重点是精确测量和控制产生的激振力,以更好地满足手术过程中的活体医疗安全要求:结果:因此,我们开发出了基于外加气流的激振力控制和测量系统:结论:该系统可产生持续时间少于 5 毫秒的短促高动态气流,以及持续时间为 700 毫秒的准静态激振力。激振力范围从 1μN 到 40 mN,在相关范围内,激振力误差在 0.1% 到 16% 之间。激励源与 3.2 MHz 光学相干系统相结合,可实现基于相位的动态和准稳态弹性成像,以及稳健的非接触式经典压痕测量:该系统是一个初步原型,打算进一步开发成临床版本,在脑肿瘤手术中就地使用。
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引用次数: 0
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IEEE Transactions on Biomedical Engineering
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