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Impact of gold nanoparticles (AuNPs) on eosinophils isolated from male and female individuals 金纳米颗粒(AuNPs)对雄性和雌性个体嗜酸性粒细胞的影响
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-11-01 DOI: 10.1016/j.imbio.2023.152762
Marion Vanharen, Denis Girard

It is well established that some differences exist between the male and female immune systems. Despites this, a sex-based analysis is not frequently performed in most scientific published reports. Knowing that inflammation is a common undesired effect observed resulting from nanoparticle (NP) exposure, we investigate here how in vitro treatment of gold NPs with a primary size of 20 and 70 nm (AuNP20 and AuNP70, respectively) will alter the biology of human eosinophils isolated from men and women blood. We found that treatment of AuNP70, but not AuNP20, significantly delay apoptosis only in eosinophils isolated from women. AuNPs were found to decrease eosinophil phagocytosis, however, significance was only observed in AuNP20-induced eosinophils isolated from women. The production of IL-8 was significantly increased in response to both AuNPs but only in eosinophils isolated from men and the production of IL-1β was increased in AuNPs-induced eosinophils, although significance was observed only in AuNP70-induced eosinophils isolated from women. We conclude that future studies investigating the toxicity of AuNPs (or other NPs) should include a sex-based analysis, especially if the tested NPs have potential medical applications knowing the increased interest in the development of personalized precision medicine.

众所周知,男性和女性的免疫系统存在一些差异。尽管如此,在大多数已发表的科学报告中,基于性别的分析并不经常进行。了解到炎症是纳米颗粒(NP)暴露引起的常见不良反应,我们在此研究了金纳米颗粒(分别为20 nm和70 nm)的体外处理如何改变从男性和女性血液中分离的人类嗜酸性粒细胞的生物学特性。我们发现,仅在女性嗜酸性粒细胞中,使用AuNP70而非AuNP20治疗可显著延缓细胞凋亡。研究发现,AuNPs可以减少嗜酸性粒细胞的吞噬,然而,这种作用仅在女性分离的aunp20诱导的嗜酸性粒细胞中观察到。在这两种AuNPs的作用下,IL-8的产生均显著增加,但仅在从男性分离的嗜酸性粒细胞中,而IL-1β的产生在AuNPs诱导的嗜酸性粒细胞中增加,尽管仅在从女性分离的aunp70诱导的嗜酸性粒细胞中观察到显著性。我们的结论是,未来调查AuNPs(或其他NPs)毒性的研究应该包括基于性别的分析,特别是如果测试的NPs有潜在的医学应用,知道个性化精准医疗发展的兴趣日益增加。
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引用次数: 0
Evaluation of the anti-inflammatory effects of PI3Kδ/γ inhibitors for treating acute lung injury PI3Kδ/γ抑制剂治疗急性肺损伤的抗炎作用评价。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-10-05 DOI: 10.1016/j.imbio.2023.152753
Wendian Xiong , Lei Jia , Yanfei Cai , Yun Chen , Mingzhu Gao , Jian Jin , Jingyu Zhu

Phosphatidylinositol 3-kinase delta (PI3Kδ) and gamma (PI3Kγ) are predominantly located in immune and hematopoietic cells. It is well-established that PI3Kδ/γ plays important roles in the immune system and participates in inflammation; hence, it could be a potential target for anti-inflammatory therapy. Currently, several PI3K inhibitors are used clinically to treat cancers with aberrant PI3K signaling; however, their role in treating acute respiratory inflammatory diseases has rarely been explored. Herein, we investigated the potential anti-inflammatory activities of several pharmacological PI3K inhibitors, including marketed drugs idelalisib (PI3Kδ), duvelisib (PI3Kδ/γ), and copanlisib (pan-PI3K with preferential α/δ) and the clinical drug eganelisib (PI3Kγ), for treating acute lung injury (ALI). In the lipopolysaccharide-induced RAW264.7 macrophage inflammatory model, the four inhibitors significantly suppressed proinflammatory cytokine expression by inhibiting the PI3K signaling pathway. Oral administration of PI3K inhibitors markedly improved lung injury in a murine model of ALI. PI3K pathway inhibition decreased inflammatory cell infiltration and total protein levels, as well as reduced the expression of associated lung inflammatory factors. Collectively, all four representative PI3K inhibitors exerted prominent anti-inflammatory properties, indicating that PI3K δ and/or γ inhibition could be ideal targets to treat respiratory inflammatory diseases by reducing the inflammatory response. The findings of the current study provide a new basis for utilizing PI3K inhibitors to treat acute respiratory inflammatory diseases.

磷脂酰肌醇3-激酶德尔塔(PI3Kδ)和γ(PI3Kγ)主要位于免疫细胞和造血细胞中。PI3Kδ/γ在免疫系统中发挥重要作用,参与炎症反应;因此,它可能成为抗炎治疗的潜在靶点。目前,几种PI3K抑制剂在临床上用于治疗PI3K信号异常的癌症;然而,它们在治疗急性呼吸道炎症性疾病中的作用很少被探索。在此,我们研究了几种药物PI3K抑制剂的潜在抗炎活性,包括上市药物idelalisb(PI3Kδ)、duvelisib(PI3Kδ/γ)和copanlisb(具有优先α/δ的pan-PI3K)以及临床药物eganelisib(PI3Kγ),用于治疗急性肺损伤(ALI)。在脂多糖诱导的RAW264.7巨噬细胞炎症模型中,四种抑制剂通过抑制PI3K信号通路显著抑制促炎细胞因子的表达。口服PI3K抑制剂显著改善ALI小鼠模型的肺损伤。PI3K通路抑制降低了炎症细胞浸润和总蛋白水平,并降低了相关肺部炎症因子的表达。总之,所有四种具有代表性的PI3K抑制剂都具有显著的抗炎特性,表明PI3Kδ和/或γ抑制可能是通过减少炎症反应来治疗呼吸道炎症疾病的理想靶点。本研究结果为利用PI3K抑制剂治疗急性呼吸道炎症性疾病提供了新的基础。
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引用次数: 0
The role of T cells and shared genes in psoriasis and inflammatory bowel disease based on single-cell RNA and comprehensive analysis 基于单细胞RNA和综合分析的T细胞和共享基因在银屑病和炎症性肠病中的作用。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-10-04 DOI: 10.1016/j.imbio.2023.152754
Xiaofeng Liang , Zhishen Peng , Ying Deng , Xiaobing Lin , Runnan Chen , Yujing Niu , Weiyi Lin , Zien Lin , Kuan Lai , Shanshan Wei

Psoriasis and inflammatory bowel disease (IBD) have a similar etiology, including abnormal activation of T cells. Differentially expressed genes (DEGs) analysis was used to search for shared genes. GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) analysis were then performed. Secondly, single-cell RNA analysis (scRNA-seq) and immune infiltration were employed to explore the immune imbalance of the diseases. By weighted gene co expression network analysis (WGCNA), we obtained hub shared genes. Furthermore, we analyzed the diagnostic performance and immune association with the hub genes. Finally, functional enrichment of miRNAs related to hub shared genes was carried out. Single-cell analysis showed a high proportion of T cells among infiltrated immune cells and immune infiltration showed CD4+ T and γδ T cells were significantly elevated in diseases. Hub shared genes, LCN2, CXCL1 and PI3 had excellent diagnostic properties and were positively correlated with neutrophils, CD4+ T and γδ T cells. IL17 and TNF signaling pathway were the common pathway. In conclusion, CD4+ and γδ T cells and hub shared genes may play a crucial part in common mechanism between psoriasis and IBD. Moreover, hub shared genes may be potential diagnostic markers.

银屑病和炎症性肠病(IBD)有相似的病因,包括T细胞的异常激活。差异表达基因(DEGs)分析用于搜索共享基因。然后进行GO(基因本体论)和KEGG(京都基因和基因组百科全书)分析。其次,采用单细胞RNA分析(scRNA-seq)和免疫浸润来探讨疾病的免疫失衡。通过加权基因共表达网络分析(WGCNA),我们获得了中枢共享基因。此外,我们还分析了中枢基因的诊断性能和免疫相关性。最后,对与中枢共享基因相关的miRNA进行了功能富集。单细胞分析显示,浸润的免疫细胞中T细胞比例较高,免疫浸润显示CD4+T和γδT细胞在疾病中显著升高。中枢共享基因LCN2、CXCL1和PI3具有良好的诊断特性,并与中性粒细胞、CD4+T和γδT细胞呈正相关。IL17和TNF信号通路是常见的信号通路。总之,CD4+和γδT细胞以及中枢共享基因可能在银屑病和IBD的共同机制中发挥关键作用。此外,中枢共享基因可能是潜在的诊断标志物。
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引用次数: 0
Study of tissue transglutaminase spliced variants expressed in THP-1 derived macrophages exhibiting distinct functional phenotypes 显示不同功能表型的THP-1衍生巨噬细胞中表达的组织转谷氨酰胺酶剪接变异体的研究。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-10-02 DOI: 10.1016/j.imbio.2023.152752
Paula Arbildi , Federico Calvo , Victoria Macías , Claudio Rodríguez-Camejo , Cecilia Sóñora , Ana Hernández

Tissue transglutaminase (TG2) expressed in monocytes and macrophage is known to participate in processes during either early and resolution stages of inflammation. The alternative splicing of tissue transglutaminase gene is a mechanism that increases its functional diversity. Four spliced variants are known with truncated C-terminal domains (TGM2_v2, TGM2_v3, TGM2_v4a, TGM2_v4b) but scarce information is available about its expression in human monocyte and macrophages.

We studied the expression of canonical TG2 (TGM2_v1) and its short spliced variants by RT-PCR during differentiation of TPH-1 derived macrophages (dTHP-1) using two protocols (condition I and II) that differ in Phorbol-12-myristate-13-acetate dose and time schedule. The production of TNF-α and IL-1β in supernatant of dTHP-1, measured by ELISA in supernatants showed higher proinflammatory milieu in condition I.

We found that the expression of all mRNA TG2 spliced variants were up-regulated during macrophage differentiation and after IFN-γ treatment of dTHP-1 cells in both conditions. Nevertheless, the relative fold increase or TGM2_v3 in relation with TGM2_v1 was higher only with the condition I.

M1/M2-like THP-1 macrophages obtained with IFN-γ/IL-4 treatments showed that the up-regulation of TGM2_v1 induced by IL-4 was higher in relation with any short spliced variants. The qualitative profile of relative contribution of spliced variants in M1/M2-like THP-1 cells showed a trend to higher expression of TGM2_v3 in the inflammatory functional phenotype.

Our results contribute to the knowledge about TG2 spliced variants in the biology of monocyte/macrophage cells and show how the differentiation conditions can alter their expression and cell function.

已知在单核细胞和巨噬细胞中表达的组织谷氨酰胺转移酶(TG2)参与炎症早期和消退阶段的过程。组织转谷氨酰胺酶基因的选择性剪接是增加其功能多样性的一种机制。已知四种具有截短的C末端结构域的剪接变体(TGM2_v2、TGM2_v3、TGM2_v4a、TGM2-v4b),但关于其在人类单核细胞和巨噬细胞中的表达的信息很少。我们通过RT-PCR研究了经典TG2(TGM2_v1)及其短剪接变体在TPH-1衍生的巨噬细胞(dTHP-1)分化过程中的表达,使用了两种方案(条件I和II),这两种方案在Phorbol-12-肉豆蔻酸酯-13-乙酸盐的剂量和时间安排上不同。在条件I下,通过ELISA测量的dTHP-1上清液中TNF-α和IL-1β的产生显示出更高的促炎环境。我们发现,在巨噬细胞分化过程中以及在两种条件下IFN-γ处理dTHP-1细胞后,所有mRNA TG2剪接变异体的表达均上调。然而,TGM2_v3相对于TGM2_v1的相对倍数增加仅在条件I时更高。用IFN-γ/IL-4处理获得的M1/M2样THP-1巨噬细胞表明,IL-4诱导的TGM2_v2的上调与任何短剪接变体有关。M1/M2-like THP-1细胞中剪接变异体的相对贡献的定性图谱显示出TGM2_v3在炎症功能表型中表达更高的趋势。我们的研究结果有助于了解单核细胞/巨噬细胞生物学中的TG2剪接变体,并显示分化条件如何改变其表达和细胞功能。
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引用次数: 0
Identification of hub biomarkers and immune-related pathways participating in the progression of Kawasaki disease by integrated bioinformatics analysis 通过综合生物信息学分析鉴定参与川崎病进展的中枢生物标志物和免疫相关途径。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-09-26 DOI: 10.1016/j.imbio.2023.152750
Yang Gao , Xuan Tang , Guanghui Qian , Hongbiao Huang , Nana Wang , Yan Wang , Wenyu Zhuo , Jiaqi Jiang , Yiming Zheng , Wenjie Li , Zhiheng Liu , Xuan Li , Lei Xu , Jiaying Zhang , Li Huang , Ying Liu , Haitao Lv

Background

Kawasaki disease (KD) is a systemic vasculitis that commonly affects children and its etiology remains unknown. Growing evidence suggests that immune-mediated inflammation and immune cells in the peripheral blood play crucial roles in the pathophysiology of KD. The objective of this research was to find important biomarkers and immune-related mechanisms implicated in KD, along with their correlation with immune cells in the peripheral blood.

Material/Methods

Gene microarray data from the Gene Expression Omnibus (GEO) was utilized in this study. Three datasets, namely GSE63881 (341 samples), GSE73463 (233 samples), and GSE73461 (279 samples), were obtained. To find intersecting genes, we employed differentially expressed genes (DEGs) analysis and weighted gene co-expression network analysis (WGCNA). Subsequently, functional annotation, construction of protein–protein interaction (PPI) networks, and Least Absolute Shrinkage and Selection Operator (LASSO) regression were performed to identify hub genes. The accuracy of these hub genes in identifying KD was evaluated using the receiver operating characteristic curve (ROC). Furthermore, Gene Set Variation Analysis (GSVA) was employed to explore the composition of circulating immune cells within the assessed datasets and their relationship with the hub gene markers.

Results

WGCNA yielded eight co-expression modules, with one hub module (MEblue module) exhibiting the strongest association with acute KD. 425 distinct genes were identified. Integrating WGCNA and DEGs yielded a total of 277 intersecting genes. By conducting LASSO analysis, five hub genes (S100A12, MMP9, TLR2, NLRC4 and ARG1) were identified as potential biomarkers for KD. The diagnostic value of these five hub genes was demonstrated through ROC curve analysis, indicating their high accuracy in diagnosing KD. Analysis of the circulating immune cell composition within the assessed datasets revealed a significant association between KD and various immune cell types, including activated dendritic cells, neutrophils, immature dendritic cells, macrophages, and activated CD8 T cells. Importantly, all five hub genes exhibited strong correlations with immune cells.

Conclusion

Activated dendritic cells, neutrophils, and macrophages were closely associated with the pathogenesis of KD. Furthermore, the hub genes (S100A12, MMP9, TLR2, NLRC4, and ARG1) are likely to participate in the pathogenic mechanisms of KD through immune-related signaling pathways.

背景:川崎病(KD)是一种常见于儿童的系统性血管炎,其病因尚不清楚。越来越多的证据表明,免疫介导的炎症和外周血中的免疫细胞在KD的病理生理学中起着至关重要的作用。本研究的目的是寻找与KD相关的重要生物标志物和免疫相关机制,以及它们与外周血免疫细胞的相关性。材料/方法:本研究使用来自基因表达综合库(GEO)的基因微阵列数据。获得了三个数据集,即GSE63881(341个样本)、GSE73463(233个样本)和GSE73461(279个样本)。为了找到交叉基因,我们采用了差异表达基因(DEGs)分析和加权基因共表达网络分析(WGCNA)。随后,进行了功能注释、蛋白质-蛋白质相互作用(PPI)网络的构建和最小绝对收缩和选择算子(LASSO)回归,以鉴定枢纽基因。使用受体操作特征曲线(ROC)评估这些枢纽基因在鉴定KD中的准确性。此外,采用基因集变异分析(GSVA)来探索评估数据集中循环免疫细胞的组成及其与中枢基因标记物的关系。结果:WGCNA产生了8个共表达模块,其中一个枢纽模块(MEblue模块)与急性KD表现出最强的相关性。共鉴定出425个不同的基因。整合WGCNA和DEG共产生277个交叉基因。通过LASSO分析,5个枢纽基因(S100A12、MMP9、TLR2、NLRC4和ARG1)被鉴定为KD的潜在生物标志物。ROC曲线分析证明了这五个枢纽基因的诊断价值,表明它们在诊断KD方面具有较高的准确性。对评估数据集中循环免疫细胞组成的分析显示,KD与各种免疫细胞类型之间存在显著关联,包括活化的树突状细胞、中性粒细胞、未成熟的树突状细胞,巨噬细胞和活化的CD8 T细胞。重要的是,所有五个中枢基因都表现出与免疫细胞的强烈相关性。结论:活化的树突状细胞、中性粒细胞和巨噬细胞与KD的发病机制密切相关。此外,中枢基因(S100A12、MMP9、TLR2、NLRC4和ARG1)可能通过免疫相关信号通路参与KD的致病机制。
{"title":"Identification of hub biomarkers and immune-related pathways participating in the progression of Kawasaki disease by integrated bioinformatics analysis","authors":"Yang Gao ,&nbsp;Xuan Tang ,&nbsp;Guanghui Qian ,&nbsp;Hongbiao Huang ,&nbsp;Nana Wang ,&nbsp;Yan Wang ,&nbsp;Wenyu Zhuo ,&nbsp;Jiaqi Jiang ,&nbsp;Yiming Zheng ,&nbsp;Wenjie Li ,&nbsp;Zhiheng Liu ,&nbsp;Xuan Li ,&nbsp;Lei Xu ,&nbsp;Jiaying Zhang ,&nbsp;Li Huang ,&nbsp;Ying Liu ,&nbsp;Haitao Lv","doi":"10.1016/j.imbio.2023.152750","DOIUrl":"10.1016/j.imbio.2023.152750","url":null,"abstract":"<div><h3>Background</h3><p>Kawasaki disease (KD) is a systemic vasculitis that commonly affects children and its etiology remains unknown. Growing evidence suggests that immune-mediated inflammation and immune cells in the peripheral blood play crucial roles in the pathophysiology of KD. The objective of this research was to find important biomarkers and immune-related mechanisms implicated in KD, along with their correlation with immune cells in the peripheral blood.</p></div><div><h3>Material/Methods</h3><p>Gene microarray data from the Gene Expression Omnibus (GEO) was utilized in this study. Three datasets, namely GSE63881 (341 samples), GSE73463 (233 samples), and GSE73461 (279 samples), were obtained. To find intersecting genes, we employed differentially expressed genes (DEGs) analysis and weighted gene co-expression network analysis (WGCNA). Subsequently, functional annotation, construction of protein–protein interaction (PPI) networks, and Least Absolute Shrinkage and Selection Operator (LASSO) regression were performed to identify hub genes. The accuracy of these hub genes in identifying KD was evaluated using the receiver operating characteristic curve (ROC). Furthermore, Gene Set Variation Analysis (GSVA) was employed to explore the composition of circulating immune cells within the assessed datasets and their relationship with the hub gene markers.</p></div><div><h3>Results</h3><p>WGCNA yielded eight co-expression modules, with one hub module (MEblue module) exhibiting the strongest association with acute KD. 425 distinct genes were identified. Integrating WGCNA and DEGs yielded a total of 277 intersecting genes. By conducting LASSO analysis, five hub genes (S100A12, MMP9, TLR2, NLRC4 and ARG1) were identified as potential biomarkers for KD. The diagnostic value of these five hub genes was demonstrated through ROC curve analysis, indicating their high accuracy in diagnosing KD. Analysis of the circulating immune cell composition within the assessed datasets revealed a significant association between KD and various immune cell types, including activated dendritic cells, neutrophils, immature dendritic cells, macrophages, and activated CD8 T cells. Importantly, all five hub genes exhibited strong correlations with immune cells.</p></div><div><h3>Conclusion</h3><p>Activated dendritic cells, neutrophils, and macrophages were closely associated with the pathogenesis of KD. Furthermore, the hub genes (S100A12, MMP9, TLR2, NLRC4, and ARG1) are likely to participate in the pathogenic mechanisms of KD through immune-related signaling pathways.</p></div>","PeriodicalId":13270,"journal":{"name":"Immunobiology","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2023-09-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41199497","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification and validation of a novel NK cells-related signature to predict prognosis and immune microenvironment in LUAD 一种新的NK细胞相关信号的鉴定和验证,用于预测LUAD的预后和免疫微环境。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-09-23 DOI: 10.1016/j.imbio.2023.152751
Chenghu Song , Weici Liu , Guanyu Jiang , Zhao He , Ruixin Wang , Xiaokun Wang , Ruo Chen , Wenjun Mao , Shaojin Zhu

Background

The prevalence and fatality rates of lung cancer are experiencing a rapid escalation. Natural Killer (NK) cells have been established to have a crucial role in both tumor initiation and progression. Nevertheless, uncertainties persist regarding their precise implications in the prognosis of LUAD.

Methods

The data were obtained from reputable sources, such as the Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO) database, and our internally generated sequencing data. Utilizing the TCGA data as a background, we selected intersecting genes, validated by cluster analysis, to establish a Cox model and validated it using the GEO datasets. Furthermore, we conducted extensive analyses to investigate the significance of potential biomarkers in relation to immune cell infiltration, single-cell data, differential gene expression, and drug sensitivity.

Results

67 immune-related genes associated with NK cells (NK-IRGs) were identified in the TCGA datasets, whose research potential was demonstrated by cluster analysis. A prognostic signature was identified utilizing the univariate and multivariate Cox model, resulting in the identification of five genes, which was validated using GEO datasets. Additionally, the nomogram's calibration curve demonstrated exceptional concordance between the projected and actual survival rates. Subsequent investigations uncovered that this prognostic signature demonstrated its independence as a risk factor. Notably, in the low-risk group, NK cells exhibited elevated levels of immune checkpoint molecules, indicating heightened sensitivity to immune therapy. These findings highlight the potential of utilizing this signature as a valuable tool in the selection of patients who could benefit from targeted immune interventions.

背景:癌症的发病率和死亡率正在迅速上升。自然杀伤细胞(NK)已被证实在肿瘤的发生和发展中起着至关重要的作用。然而,关于其对LUAD预后的确切影响,仍存在不确定性。方法:数据来自著名来源,如癌症基因组图谱(TCGA)、基因表达综合数据库(GEO)和我们内部生成的测序数据。利用TCGA数据作为背景,我们选择交叉基因,通过聚类分析进行验证,建立Cox模型,并使用GEO数据集进行验证。此外,我们进行了广泛的分析,以研究潜在生物标志物在免疫细胞浸润、单细胞数据、差异基因表达和药物敏感性方面的意义。结果:在TCGA数据集中鉴定出67个与NK细胞相关的免疫相关基因,聚类分析显示了其研究潜力。利用单变量和多变量Cox模型确定了预后特征,从而确定了五个基因,并使用GEO数据集进行了验证。此外,列线图的校准曲线显示了预测存活率和实际存活率之间的异常一致性。随后的研究发现,这种预后标志表明其作为一个风险因素的独立性。值得注意的是,在低风险组中,NK细胞表现出免疫检查点分子水平升高,表明对免疫治疗的敏感性增强。这些发现突出了利用这一特征作为一种有价值的工具来选择可以从靶向免疫干预中受益的患者的潜力。
{"title":"Identification and validation of a novel NK cells-related signature to predict prognosis and immune microenvironment in LUAD","authors":"Chenghu Song ,&nbsp;Weici Liu ,&nbsp;Guanyu Jiang ,&nbsp;Zhao He ,&nbsp;Ruixin Wang ,&nbsp;Xiaokun Wang ,&nbsp;Ruo Chen ,&nbsp;Wenjun Mao ,&nbsp;Shaojin Zhu","doi":"10.1016/j.imbio.2023.152751","DOIUrl":"10.1016/j.imbio.2023.152751","url":null,"abstract":"<div><h3>Background</h3><p>The prevalence and fatality rates of lung cancer are experiencing a rapid escalation. Natural Killer (NK) cells have been established to have a crucial role in both tumor initiation and progression. Nevertheless, uncertainties persist regarding their precise implications in the prognosis of LUAD.</p></div><div><h3>Methods</h3><p><span>The data were obtained from reputable sources, such as the Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO) database, and our internally generated sequencing data. Utilizing the TCGA data as a background, we selected intersecting genes, validated by cluster analysis, to establish a Cox model and validated it using the GEO datasets. Furthermore, we conducted extensive analyses to investigate the significance of potential biomarkers in relation to </span>immune cell<span> infiltration, single-cell data, differential gene expression, and drug sensitivity.</span></p></div><div><h3>Results</h3><p>67 immune-related genes associated with NK cells (NK-IRGs) were identified in the TCGA datasets, whose research potential was demonstrated by cluster analysis. A prognostic signature was identified utilizing the univariate and multivariate Cox model, resulting in the identification of five genes, which was validated using GEO datasets. Additionally, the nomogram's calibration curve demonstrated exceptional concordance between the projected and actual survival rates. Subsequent investigations uncovered that this prognostic signature demonstrated its independence as a risk factor. Notably, in the low-risk group, NK cells exhibited elevated levels of immune checkpoint molecules, indicating heightened sensitivity to immune therapy. These findings highlight the potential of utilizing this signature as a valuable tool in the selection of patients who could benefit from targeted immune interventions.</p></div>","PeriodicalId":13270,"journal":{"name":"Immunobiology","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2023-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41151928","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Alterations in Helios+ T cell subsets in peripheral blood of early-stage lung adenocarcinoma patients: Implications for early diagnosis 早期肺腺癌患者外周血Helios+T细胞亚群的变化:对早期诊断的意义。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-09-22 DOI: 10.1016/j.imbio.2023.152749
Yiming Zhao , Ming Zhao , Meng Li , Xiancan Ma , Mohan Zheng , Yuying Nie , Yaoyi Zhu , Jiaxin Ren , Ainizati Hasimu , Zihang Yuan , Qi Li , Ayibaota Bahabayi , Zhonghui Zhang , Xingyue Zeng , Chen Liu

Objective

This study aimed to investigate the changes and significance of circulating Helios-associated T cell subsets in patients with early-stage lung adenocarcinoma (LUAD).

Methods

Blood samples were collected from 35 healthy controls and 34 patients with early-stage LUAD. Flow cytometry was used to analyze various CD4+ T cell subsets, including regulatory T(Treg) cells, follicular regulatory T(Tfr) cells, follicular helper T (Tfh) cells, and conventional T (con-T) cells. Correlation analysis was conducted to investigate the association of Helios-related subsets with clinical indicators. The ROC curve was used to explore the potential clinical value of Helios+ T cell subsets in the screening of patients with early LUAD. Fifteen of these patients were tracked after lung cancer resection and changes in Helios+ T cell subsets before and after treatment were analyzed.

Results

The percentage and absolute number of Tregs were up-regulated in LUAD patients while Tfh and con-T cells expressing Helios were down-regulated. Absolute counts of Tfr and con-T cells and Helios expression in Tfr and Treg decreased significantly after resection. Helios+ Tfh and con-T were negatively correlated with certain tumor markers. Areas under the curve (AUCs) of percentages and absolute counts of Helios+ Tfh, Treg, Tfr and con-T cells to distinguish early LUAD from healthy individuals were 0.7277, 0.5697, 0.5718, 0.7210 (percentages), 0.7336, 0.7378, 0.5908 and 0.7445(absolute numbers), respectively.

Conclusion

Helios+ T cell subsets in peripheral blood of early-stage LUAD patients has changed significantly, which may be related to the pathogenesis of LUAD and could help for early diagnosis of LUAD.

目的:探讨早期肺腺癌(LUAD)患者循环Helios相关T细胞亚群的变化及其意义。流式细胞术用于分析各种CD4+T细胞亚群,包括调节性T细胞(Treg)、卵泡调节性T(Tfr)细胞、卵泡辅助T细胞(Tfh)和常规T细胞(con-T)。进行相关性分析以研究Helios相关亚群与临床指标的相关性。ROC曲线用于探索Helios+T细胞亚群在筛查早期LUAD患者中的潜在临床价值。其中15例患者在癌症切除术后进行了追踪,并分析了治疗前后Helios+T细胞亚群的变化。结果:LUAD患者Tregs的百分比和绝对数量上调,而表达Helios的Tfh和con-T细胞则下调。切除后,Tfr和con-T细胞的绝对计数以及Tfr和Treg中Helios的表达显著下降。Helios+Tfh和con-T与某些肿瘤标志物呈负相关。Helios+Tfh、Treg、Tfr和con-T细胞的百分比和绝对计数的曲线下面积(AUCs)分别为0.7277、0.5697、0.5718、0.7210(百分比)、0.7336、0.7378、0.5908和0.7445(绝对数),以区分早期LUAD和健康个体。结论:早期LUAD患者外周血Helios+T细胞亚群发生明显变化,可能与LUAD的发病机制有关,有助于LUAD的早期诊断。
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引用次数: 0
PRICKLE1 gene methylation and abnormal transcription in Chinese patients with ankylosing spondylitis 中国强直性脊柱炎患者PRICKLE1基因甲基化与转录异常。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-09-19 DOI: 10.1016/j.imbio.2023.152742
Tingting Zhou , Xinqi Wang , Jiangping Kong , Lingxiang Yu , Huimin Xie , Feier Wang , Shenqian Xu , Zongwen Shuai , Qiang Zhou , Faming Pan

Background

Ankylosing spondylitis (AS) is a common inflammatory arthritis without a reliable biomarker. The role of methylation and mRNA expression of PRICKLE1 promoter in the pathogenesis of ankylosing spondylitis remains unclear.

Methods

A two-stage case-control design was used to detect the characteristics of methyl group and transcriptome of PRICKLE1 gene in Ankylosing spondylitis. The methylation degree of PRICKLE1 gene promoter region was tested by phosphate-sequencing, and further analyzed whether there was significant difference in methylation level of PRICKLE1 gene. The expression levels of PRICKLE1 mRNA in 50 AS patients and 50 healthy controls were detected by real-time quantitative PCR (RT-qPCR).

Results

Compared with healthy control group, the intensity of methylation in 4 ponds of PRICKLE1 in patients with Ankylosing spondylitis was low, and the mRNA levels were overexpressed (P = 0.017). ROC results showed that the sensitivity of PRICKLE1 was 68.67% and specificity was 71.43%.

Conclusion

There is a significant change in the concentration of serum PRICKLE1 mRNA​in patients with Ankylosing spondylitis, and the degree of gene methylation is significantly reduced, suggesting that PRICKLE1 gene maybe involved in the pathogenesis of Ankylosing spondylitis, which may be useful for predicting the occurrence of AS and finding new early screening indicators.

背景:强直性脊柱炎(AS)是一种常见的炎症性关节炎,尚无可靠的生物标志物。PRICKLE1启动子甲基化和mRNA表达在强直性脊柱炎发病机制中的作用尚不清楚。方法:采用两阶段病例对照设计,检测强直性脊柱炎患者PRICKLE1基因甲基组和转录组的特征。通过磷酸测序检测了PRICKLE1基因启动子区的甲基化程度,并进一步分析了PRICKLE1基因甲基化水平是否存在显著差异。结果:与健康对照组相比,强直性脊柱炎患者4池PRICKLE1甲基化强度较低,ROC结果显示PRICKLE1的敏感性为68.67%,特异性为71.43%​在强直性脊柱炎患者中,基因甲基化程度显著降低,提示PRICKLE1基因可能参与了强直性脊柱炎的发病机制,这可能有助于预测AS的发生和寻找新的早期筛查指标。
{"title":"PRICKLE1 gene methylation and abnormal transcription in Chinese patients with ankylosing spondylitis","authors":"Tingting Zhou ,&nbsp;Xinqi Wang ,&nbsp;Jiangping Kong ,&nbsp;Lingxiang Yu ,&nbsp;Huimin Xie ,&nbsp;Feier Wang ,&nbsp;Shenqian Xu ,&nbsp;Zongwen Shuai ,&nbsp;Qiang Zhou ,&nbsp;Faming Pan","doi":"10.1016/j.imbio.2023.152742","DOIUrl":"10.1016/j.imbio.2023.152742","url":null,"abstract":"<div><h3>Background</h3><p>Ankylosing spondylitis (AS) is a common inflammatory arthritis without a reliable biomarker. The role of methylation and mRNA expression of PRICKLE1 promoter in the pathogenesis of ankylosing spondylitis remains unclear.</p></div><div><h3>Methods</h3><p>A two-stage case-control design was used to detect the characteristics of methyl group and transcriptome of PRICKLE1 gene in Ankylosing spondylitis. The methylation degree of PRICKLE1 gene promoter region was tested by phosphate-sequencing, and further analyzed whether there was significant difference in methylation level of PRICKLE1 gene. The expression levels of PRICKLE1 mRNA in 50 AS patients and 50 healthy controls were detected by real-time quantitative PCR (RT-qPCR).</p></div><div><h3>Results</h3><p>Compared with healthy control group, the intensity of methylation in 4 ponds of PRICKLE1 in patients with Ankylosing spondylitis was low, and the mRNA levels were overexpressed (<em>P</em> = 0.017). ROC results showed that the sensitivity of PRICKLE1 was 68.67% and specificity was 71.43%.</p></div><div><h3>Conclusion</h3><p>There is a significant change in the concentration of serum PRICKLE1 mRNA​in patients with Ankylosing spondylitis, and the degree of gene methylation is significantly reduced, suggesting that PRICKLE1 gene maybe involved in the pathogenesis of Ankylosing spondylitis, which may be useful for predicting the occurrence of AS and finding new early screening indicators.</p></div>","PeriodicalId":13270,"journal":{"name":"Immunobiology","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2023-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"41127444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Cafeteria diet-induced obesity remodels immune response in acute Trypanosoma cruzi infection 自助餐厅饮食诱导的肥胖重塑了急性克氏锥虫感染的免疫反应。
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-09-15 DOI: 10.1016/j.imbio.2023.152747
Amanda Goulart , Naira Ferreira Anchieta , Pedro Alexandre Sampaio , Vânia Brazão , Jefferson Luiz Da Silva , Gisele Bulhões Portapilla , Andressa Duarte , Daiane Yukie Tezuca , Maiara Voltarelli Providello , Angelita Maria Stabile , José Clóvis do Prado Júnior

Background

Obesity is a global problem associated with several conditions, including hypertension, diabetes, arthritis and cardiovascular diseases. With the increase in the prevalence of obesity in recent years, mostly in developing countries, it is important to study its impact on various diseases, including infectious illnesses, such as Chagas disease, caused by the protozoan Trypanosoma cruzi. Considering that a diet rich in salt, sugar, and fat is associated with obesity, this study aimed to evaluate the influence of cafeteria diet (CAF)-induced obesity on immune responses in T. cruzi-infected rats.

Methods

Male Wistar Hannover rats were provided with water and food ad libitum (chow group). The CAF-fed groups received a normal rodent diet or CAF. The animals were intraperitoneally infected with 105 trypomastigote forms of the Y strain of T. cruzi present in the whole blood from a previously infected mouse.

Results

CAF-fed rats showed a significant increase in visceral adipose tissue weight compared to chow-fed rats. A significant reduction in CD3+ CD4+ helper splenic T cells was observed in obese-infected rats compared to non-obese-infected rats, as well as CD11b and macrophages. In addition, macrophages from obese animals displayed reduced RT1b levels compared to those from control animals. Moreover, INF-γ, an important factor in macrophage activation, was reduced in obese-infected rats compared with their counterparts.

Conclusions

These results indicate that a CAF can impair the cell-mediated immune response against T. cruzi.

背景:肥胖是一个全球性问题,与多种疾病有关,包括高血压、糖尿病、关节炎和心血管疾病。近年来,随着肥胖患病率的增加,主要是在发展中国家,研究肥胖对各种疾病的影响很重要,包括由原生动物克氏锥虫引起的恰加斯病等传染病。考虑到富含盐、糖和脂肪的饮食与肥胖有关,本研究旨在评估自助餐厅饮食(CAF)诱导的肥胖对克鲁兹霉感染大鼠免疫反应的影响。方法:雄性Wistar Hannover大鼠随意饮水和进食(食物组)。CAF喂养组接受正常啮齿动物饮食或CAF。用105种锥虫体形式的克鲁兹锥虫Y株腹膜内感染动物,该Y株存在于先前感染的小鼠的全血中。结果:与喂食食物的大鼠相比,喂食CAF的大鼠内脏脂肪组织重量显著增加。与非肥胖感染大鼠相比,在肥胖感染的大鼠中观察到CD3+CD4+辅助性脾脏T细胞以及CD11b和巨噬细胞的显著减少。此外,与对照动物相比,肥胖动物的巨噬细胞显示出RT1b水平降低。此外,与肥胖感染大鼠相比,巨噬细胞活化的重要因素INF-γ减少。结论:这些结果表明CAF可以削弱细胞介导的对克鲁兹锥虫的免疫反应。
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引用次数: 0
Levels of soluble TNF receptors (sTNFR1 and sTNFR2) increase with clinical worsening of patients and are related to COVID-19 mortality 可溶性 TNF 受体(sTNFR1 和 sTNFR2)水平随患者临床病情恶化而升高,并与 COVID-19 死亡率有关
IF 2.8 4区 医学 Q2 Medicine Pub Date : 2023-09-15 DOI: 10.1016/j.imbio.2023.152748
Melayne Rocha Aciole , Juliana Prado Gonçales , Patrícia Areias Feitosa Neves , Cynthia Regina Pedrosa Soares , Marta Iglis de Oliveira , Heloisa Ramos Lacerda de Melo , Reginaldo Gonçalves de Lima Neto , Líbia Cristina Rocha Vilela Moura , Paulo Sergio Ramos Araújo , Virginia Maria Barros de Lorena

The present study aimed to inspect the serum levels of the soluble receptors, sTNFR1 and sTNFR2, in patients with COVID-19. The large production of inflammatory cytokines is an essential process in the pathogenesis of COVID-19. TNF is a multifaceted proinflammatory cytokine which has soluble and membrane receptors. Thus, knowing the role of these receptors will help better understand this disease's immunopathogenesis. We included 131 patients confirmed for SARS-CoV-2, separated into three groups: ward patients without O2 support, group A (n = 14); ward patients with O2 support, group B (n = 85), and patients in an intensive care unit (ICU), group C (n = 32), making up the receptors dosed by flow cytometry. The results showed that sTNFR1 and sTNFR2 are associated with disease severity, being higher in group C when compared to group A. As for the levels of receptors and their relationship with the degree of lung involvement, we found higher values of sTNFR1 in patients in group 1 (pulmonary involvement < 25%), suggesting that inflammatory processes related to TNF are not necessarily associated with the primary site of infection. When we analysed the patients who passed away compared to those who recovered, both receptors significantly increased the mortality numbers. These findings suggest a relevant influence of soluble receptors in the inflammatory processes involved in the pathogenesis of COVID-19. Wherefore, we suggest using these receptors as biomarkers of severity and mortality of the disease.

本研究旨在检测 COVID-19 患者血清中可溶性受体 sTNFR1 和 sTNFR2 的水平。炎性细胞因子的大量产生是COVID-19发病机制的一个重要过程。TNF 是一种多方面的促炎细胞因子,具有可溶性和膜受体。因此,了解这些受体的作用有助于更好地理解这种疾病的免疫发病机制。我们将 131 名确诊为 SARS-CoV-2 的患者分为三组:无氧气支持的病房患者,A 组(14 人);有氧气支持的病房患者,B 组(85 人);重症监护室(ICU)患者,C 组(32 人)。结果显示,sTNFR1和sTNFR2与疾病严重程度有关,C组高于A组。至于受体水平及其与肺部受累程度的关系,我们发现1组(肺部受累< 25%)患者的sTNFR1值较高,这表明与TNF有关的炎症过程不一定与原发感染部位有关。我们对死亡患者和康复患者进行了分析,发现两种受体都会显著增加死亡率。这些研究结果表明,可溶性受体在 COVID-19 发病机制的炎症过程中具有相关影响。因此,我们建议使用这些受体作为疾病严重程度和死亡率的生物标志物。
{"title":"Levels of soluble TNF receptors (sTNFR1 and sTNFR2) increase with clinical worsening of patients and are related to COVID-19 mortality","authors":"Melayne Rocha Aciole ,&nbsp;Juliana Prado Gonçales ,&nbsp;Patrícia Areias Feitosa Neves ,&nbsp;Cynthia Regina Pedrosa Soares ,&nbsp;Marta Iglis de Oliveira ,&nbsp;Heloisa Ramos Lacerda de Melo ,&nbsp;Reginaldo Gonçalves de Lima Neto ,&nbsp;Líbia Cristina Rocha Vilela Moura ,&nbsp;Paulo Sergio Ramos Araújo ,&nbsp;Virginia Maria Barros de Lorena","doi":"10.1016/j.imbio.2023.152748","DOIUrl":"10.1016/j.imbio.2023.152748","url":null,"abstract":"<div><p>The present study aimed to inspect the serum levels of the soluble receptors, sTNFR1 and sTNFR2, in patients with COVID-19. The large production of inflammatory cytokines is an essential process in the pathogenesis of COVID-19. TNF is a multifaceted proinflammatory cytokine which has soluble and membrane receptors. Thus, knowing the role of these receptors will help better understand this disease's immunopathogenesis. We included 131 patients confirmed for SARS-CoV-2, separated into three groups: ward patients without O2 support, group A (n = 14); ward patients with O2 support, group B (n = 85), and patients in an intensive care unit (ICU), group C (n = 32), making up the receptors dosed by flow cytometry. The results showed that sTNFR1 and sTNFR2 are associated with disease severity, being higher in group C when compared to group A. As for the levels of receptors and their relationship with the degree of lung involvement, we found higher values of sTNFR1 in patients in group 1 (pulmonary involvement &lt; 25%), suggesting that inflammatory processes related to TNF are not necessarily associated with the primary site of infection. When we analysed the patients who passed away compared to those who recovered, both receptors significantly increased the mortality numbers. These findings suggest a relevant influence of soluble receptors in the inflammatory processes involved in the pathogenesis of COVID-19. Wherefore, we suggest using these receptors as biomarkers of severity and mortality of the disease.</p></div>","PeriodicalId":13270,"journal":{"name":"Immunobiology","volume":null,"pages":null},"PeriodicalIF":2.8,"publicationDate":"2023-09-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0171298523045503/pdfft?md5=9cc98f1f35933cadcff9f9c456d6c2c0&pid=1-s2.0-S0171298523045503-main.pdf","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135346641","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
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Immunobiology
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