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Adipose tissue-derived mesenchymal stromal cells attenuate acute lung injury induced by trauma and haemorrhagic shock 脂肪组织来源的间充质间质细胞可减轻外伤和出血性休克引起的急性肺损伤
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-11-01 DOI: 10.1016/j.imbio.2023.152765
Zhi Zhang , Xiaoxia Yang , Qinghong Meng , Yiyin Long , Xiaofeng Shi , Yuliang Wang

Background

Mesenchymal stromal cells (MSCs) have shown promising therapeutic options for acute lung injury (ALI) caused by multiple factors. Here, we evaluated the therapeutic potential of adipose tissue-derived mesenchymal stromal cells (ADSCs) in trauma and hemorrhagic shock (THS)-induced ALI.

Methods

ALI model induced by THS was constructed by fractures plus abdominal trauma plus acute hemorrhage plus fluid resuscitation. The ADSCs group rats were generated by injecting 2 × 106 ADSCs at 0 and 1 h after THS. The sham, ALI, and ADSCs group rats were sacrificed at 24 h after resuscitation. The changes in lung histopathology, total protein in bronchoalveolar lavage fluid (BALF), mRNA expression of pro-inflammatory/anti-inflammatory cytokines, antioxidant, and anti-apoptotic indicator, and the activity of Toll-like receptor 4 (TLR4) signaling in lung tissues were evaluated.

Results

Administration of the ADSCs reversed ALI induced by THS, including lung histopathological changes/scores, and BALF total protein concentration. Additionally, ADSCs therapy also significantly down-regulated mRNA expression of pro-inflammatory TNF-α, IL-1β, and IL-6, up-regulated mRNA expression of anti-inflammatory IL-10, anti-apoptotic molecule Bcl-2, and anti-oxidative molecule HO-1 in THS rats. Furthermore, ADSCs suppressed the expression of TLR4 in lung tissue.

Conclusion

Our data show that ADSCs administration can exert therapeutic effects on THS-induced ALI in rats and may provide beneficial in preventative strategies for ALI.

间充质间质细胞(MSCs)在多种因素引起的急性肺损伤(ALI)中显示出有希望的治疗选择。在这里,我们评估了脂肪组织来源的间充质间质细胞(ADSCs)在创伤和失血性休克(THS)诱导的ALI中的治疗潜力。方法采用骨折+腹部外伤+急性出血+液体复苏的方法,建立三手烟致sali模型。注射2 × 106个ADSCs,分别于三手通气后0、1 h生成ADSCs组大鼠。假手术组、ALI组和ADSCs组大鼠复苏后24 h处死。观察大鼠肺组织病理学、支气管肺泡灌洗液(BALF)总蛋白、促炎/抗炎细胞因子、抗氧化、抗凋亡指标mRNA表达及肺组织toll样受体4 (TLR4)信号活性的变化。结果ADSCs可逆转三手烟诱导的ALI,包括肺组织病理学改变/评分和BALF总蛋白浓度。此外,ADSCs治疗还显著下调THS大鼠促炎TNF-α、IL-1β、IL-6 mRNA表达,上调抗炎IL-10、抗凋亡分子Bcl-2、抗氧化分子HO-1 mRNA表达。此外,ADSCs抑制TLR4在肺组织中的表达。结论给药ADSCs对诱导的大鼠ALI有一定的治疗作用,并可能为ALI的预防提供有益的策略。
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引用次数: 0
IL-27p28 specifically regulates MHC II expression in macrophages through CIITA IL-27p28通过CIITA特异性调节巨噬细胞中MHC II的表达。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-11-01 DOI: 10.1016/j.imbio.2023.152757
Yu Han , Xu Zhang , Qing Wang , Xiaoyue Cui , Hesuiyuan Wang , Xiang Zhang , Qian Wang , Jianbin Ji , Yuebing Wang , Shusen Wang , Xiuming Zhang , Haijin Xu , Mingqiang Qiao , Zhenzhou Wu

Antigen-presenting cells (APCs) constantly express major histocompatibility complex II (MHC II), including macrophages and dendritic cells (DCs) which deliver antigens to CD4+ T cells and play an important role in adaptive immunity. The expression of MHC II is controlled by the transcriptional coactivator CIITA. Interleukin-27 (IL-27), a newly discovered IL-12 family cytokine, is composed of p28 and EBI3 subunits. In this study, we used IL-27p28 conditional knock-out mice to investigate the regulatory effects of IL-27p28 on macrophage polarization and the expression of MHC II in macrophages. We found that MHC II expression was upregulated in the bone marrow-derived and peritoneal exudate macrophages (BMDMs; PEMs) from IL-27p28-deficient mice, with their inflammation regulating function unaffected. We also demonstrated that in the APCs, IL-27p28 selectively regulated MHC II expression in macrophages but not in dendritic cells. During Pseudomonas aeruginosa (P. aeruginosa) reinfection, higher survival rate, bacterial clearance, and ratio of CD4+/CD8+ T cells in the spleen during the specific immune phase were observed in IL-27p28 defect mice, as well as an increased MHC II expression in alveolar macrophages (AMs). But these did not occur in the first infection. For the first time we discovered that IL-27p28 specifically regulates the expression of MHC II in macrophages by regulating CIITA, while its absence enhances antigen presentation and adaptive immunity against P. aeruginosa.

抗原呈递细胞(APC)不断表达主要组织相容性复合体II(MHC II),包括巨噬细胞和树突状细胞(DC),它们将抗原递送给CD4+T细胞,并在适应性免疫中发挥重要作用。MHC II的表达由转录共激活因子CIITA控制。白细胞介素-27(IL-27)是一种新发现的IL-12家族细胞因子,由p28和EBI3亚基组成。在本研究中,我们使用IL-27p28条件性敲除小鼠来研究IL-27p28对巨噬细胞极化和MHC II在巨噬细胞中表达的调节作用。我们发现,来自IL-27p28缺陷小鼠的骨髓来源和腹膜渗出巨噬细胞(BMDMs;PEMs)中MHC II的表达上调,其炎症调节功能不受影响。我们还证明,在APC中,IL-27p28选择性地调节巨噬细胞中MHC II的表达,但不调节树突状细胞中的表达。在铜绿假单胞菌(P.aeruginosa)再次感染期间,在IL-27p28缺陷小鼠中观察到更高的存活率、细菌清除率和脾脏中CD4+/CD8+T细胞的比率,以及肺泡巨噬细胞(AM)中MHC II表达的增加。但这些并没有发生在第一次感染中。我们首次发现IL-27p28通过调节CIITA特异性调节巨噬细胞中MHC II的表达,而其缺失增强了抗原呈递和对铜绿假单胞菌的适应性免疫。
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引用次数: 0
Anti-inflammatory activity of calmodulin-lysine N-methyltransferase through suppressing the caspase-11 non-canonical inflammasome 钙调素赖氨酸N-甲基转移酶通过抑制胱天蛋白酶-11非典型炎症小体的抗炎活性。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-11-01 DOI: 10.1016/j.imbio.2023.152758
Hui-Jin Cho, Dong Joon Lee, Young-Su Yi

Calmodulin (CaM)-lysine N-methyltransferase (CAMKMT) is a novel methyltransferase that catalyzes lysine trimethylation in CaM. However, its specific roles in inflammatory responses and diseases remain unclear. In this study, we investigated the effects of CAMKMT on caspase-11 non-canonical inflammasomes. CAMKMT expression levels were significantly decreased during inflammatory responses activated by caspase-11 non-canonical inflammasome in macrophages. Moreover, CaM lysine trimethylation was markedly inhibited, but no change was observed in CaM expression during these inflammatory responses in macrophages. Activation of the CaM downstream effectors, CaM-dependent protein kinase kinase 2 and CaM-dependent protein kinase type IV, was also inhibited during inflammatory responses activated by caspase-11 non-canonical inflammasome in macrophages. Notably, forced expression of CAMKMT restrained caspase-11 non-canonical inflammasome activation via inhibiting proteolytic activation of caspase-11 and gasdermin D (GSDMD), which in turn suppressed pyroptosis and the release of interleukin (IL)-1β and IL-18 in macrophages. Finally, an in vivo study revealed that CAMKMT ameliorated lipopolysaccharide (LPS)-stimulated acute lethal sepsis in mice by increasing the survival rate and reducing the serum levels of IL-1 β. These findings suggest CAMKMT as a novel methyltransferase that plays an anti-inflammatory role through restraining caspase-11 non-canonical inflammasome in macrophages.

钙调蛋白(CaM)-赖氨酸N-甲基转移酶(CaM国民党)是一种新型的甲基转移酶,可催化CaM中的赖氨酸三甲基化。然而,它在炎症反应和疾病中的具体作用尚不清楚。在本研究中,我们研究了CAMKMT对胱天蛋白酶-11非典型炎症小体的影响。在巨噬细胞中由胱天蛋白酶-11非典型炎症小体激活的炎症反应期间,CAM国民党的表达水平显著降低。此外,CaM赖氨酸三甲基化被显著抑制,但在巨噬细胞的这些炎症反应中,CaM的表达没有变化。CaM下游效应物CaM依赖性蛋白激酶2和CaM依赖型蛋白激酶IV的激活在巨噬细胞中由胱天蛋白酶-11非典型炎症小体激活的炎症反应期间也受到抑制。值得注意的是,CAMKMT的强制表达通过抑制胱天蛋白酶11和gasdermin D(GSDMD)的蛋白水解激活来抑制胱天酶11的非典型炎症小体激活,进而抑制巨噬细胞中焦下垂和白细胞介素(IL)-1β和IL-18的释放。最后,一项体内研究表明,CAMKMT通过提高存活率和降低血清IL-1β水平来改善脂多糖(LPS)刺激的小鼠急性致死性败血症。这些发现表明CAMKMT是一种新型的甲基转移酶,通过抑制巨噬细胞中的胱天蛋白酶-11非典型炎症小体发挥抗炎作用。
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引用次数: 0
Impact of gold nanoparticles (AuNPs) on eosinophils isolated from male and female individuals 金纳米颗粒(AuNPs)对雄性和雌性个体嗜酸性粒细胞的影响
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-11-01 DOI: 10.1016/j.imbio.2023.152762
Marion Vanharen, Denis Girard

It is well established that some differences exist between the male and female immune systems. Despites this, a sex-based analysis is not frequently performed in most scientific published reports. Knowing that inflammation is a common undesired effect observed resulting from nanoparticle (NP) exposure, we investigate here how in vitro treatment of gold NPs with a primary size of 20 and 70 nm (AuNP20 and AuNP70, respectively) will alter the biology of human eosinophils isolated from men and women blood. We found that treatment of AuNP70, but not AuNP20, significantly delay apoptosis only in eosinophils isolated from women. AuNPs were found to decrease eosinophil phagocytosis, however, significance was only observed in AuNP20-induced eosinophils isolated from women. The production of IL-8 was significantly increased in response to both AuNPs but only in eosinophils isolated from men and the production of IL-1β was increased in AuNPs-induced eosinophils, although significance was observed only in AuNP70-induced eosinophils isolated from women. We conclude that future studies investigating the toxicity of AuNPs (or other NPs) should include a sex-based analysis, especially if the tested NPs have potential medical applications knowing the increased interest in the development of personalized precision medicine.

众所周知,男性和女性的免疫系统存在一些差异。尽管如此,在大多数已发表的科学报告中,基于性别的分析并不经常进行。了解到炎症是纳米颗粒(NP)暴露引起的常见不良反应,我们在此研究了金纳米颗粒(分别为20 nm和70 nm)的体外处理如何改变从男性和女性血液中分离的人类嗜酸性粒细胞的生物学特性。我们发现,仅在女性嗜酸性粒细胞中,使用AuNP70而非AuNP20治疗可显著延缓细胞凋亡。研究发现,AuNPs可以减少嗜酸性粒细胞的吞噬,然而,这种作用仅在女性分离的aunp20诱导的嗜酸性粒细胞中观察到。在这两种AuNPs的作用下,IL-8的产生均显著增加,但仅在从男性分离的嗜酸性粒细胞中,而IL-1β的产生在AuNPs诱导的嗜酸性粒细胞中增加,尽管仅在从女性分离的aunp70诱导的嗜酸性粒细胞中观察到显著性。我们的结论是,未来调查AuNPs(或其他NPs)毒性的研究应该包括基于性别的分析,特别是如果测试的NPs有潜在的医学应用,知道个性化精准医疗发展的兴趣日益增加。
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引用次数: 0
Evaluation of the anti-inflammatory effects of PI3Kδ/γ inhibitors for treating acute lung injury PI3Kδ/γ抑制剂治疗急性肺损伤的抗炎作用评价。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-10-05 DOI: 10.1016/j.imbio.2023.152753
Wendian Xiong , Lei Jia , Yanfei Cai , Yun Chen , Mingzhu Gao , Jian Jin , Jingyu Zhu

Phosphatidylinositol 3-kinase delta (PI3Kδ) and gamma (PI3Kγ) are predominantly located in immune and hematopoietic cells. It is well-established that PI3Kδ/γ plays important roles in the immune system and participates in inflammation; hence, it could be a potential target for anti-inflammatory therapy. Currently, several PI3K inhibitors are used clinically to treat cancers with aberrant PI3K signaling; however, their role in treating acute respiratory inflammatory diseases has rarely been explored. Herein, we investigated the potential anti-inflammatory activities of several pharmacological PI3K inhibitors, including marketed drugs idelalisib (PI3Kδ), duvelisib (PI3Kδ/γ), and copanlisib (pan-PI3K with preferential α/δ) and the clinical drug eganelisib (PI3Kγ), for treating acute lung injury (ALI). In the lipopolysaccharide-induced RAW264.7 macrophage inflammatory model, the four inhibitors significantly suppressed proinflammatory cytokine expression by inhibiting the PI3K signaling pathway. Oral administration of PI3K inhibitors markedly improved lung injury in a murine model of ALI. PI3K pathway inhibition decreased inflammatory cell infiltration and total protein levels, as well as reduced the expression of associated lung inflammatory factors. Collectively, all four representative PI3K inhibitors exerted prominent anti-inflammatory properties, indicating that PI3K δ and/or γ inhibition could be ideal targets to treat respiratory inflammatory diseases by reducing the inflammatory response. The findings of the current study provide a new basis for utilizing PI3K inhibitors to treat acute respiratory inflammatory diseases.

磷脂酰肌醇3-激酶德尔塔(PI3Kδ)和γ(PI3Kγ)主要位于免疫细胞和造血细胞中。PI3Kδ/γ在免疫系统中发挥重要作用,参与炎症反应;因此,它可能成为抗炎治疗的潜在靶点。目前,几种PI3K抑制剂在临床上用于治疗PI3K信号异常的癌症;然而,它们在治疗急性呼吸道炎症性疾病中的作用很少被探索。在此,我们研究了几种药物PI3K抑制剂的潜在抗炎活性,包括上市药物idelalisb(PI3Kδ)、duvelisib(PI3Kδ/γ)和copanlisb(具有优先α/δ的pan-PI3K)以及临床药物eganelisib(PI3Kγ),用于治疗急性肺损伤(ALI)。在脂多糖诱导的RAW264.7巨噬细胞炎症模型中,四种抑制剂通过抑制PI3K信号通路显著抑制促炎细胞因子的表达。口服PI3K抑制剂显著改善ALI小鼠模型的肺损伤。PI3K通路抑制降低了炎症细胞浸润和总蛋白水平,并降低了相关肺部炎症因子的表达。总之,所有四种具有代表性的PI3K抑制剂都具有显著的抗炎特性,表明PI3Kδ和/或γ抑制可能是通过减少炎症反应来治疗呼吸道炎症疾病的理想靶点。本研究结果为利用PI3K抑制剂治疗急性呼吸道炎症性疾病提供了新的基础。
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引用次数: 0
The role of T cells and shared genes in psoriasis and inflammatory bowel disease based on single-cell RNA and comprehensive analysis 基于单细胞RNA和综合分析的T细胞和共享基因在银屑病和炎症性肠病中的作用。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-10-04 DOI: 10.1016/j.imbio.2023.152754
Xiaofeng Liang , Zhishen Peng , Ying Deng , Xiaobing Lin , Runnan Chen , Yujing Niu , Weiyi Lin , Zien Lin , Kuan Lai , Shanshan Wei

Psoriasis and inflammatory bowel disease (IBD) have a similar etiology, including abnormal activation of T cells. Differentially expressed genes (DEGs) analysis was used to search for shared genes. GO (Gene Ontology) and KEGG (Kyoto Encyclopedia of Genes and Genomes) analysis were then performed. Secondly, single-cell RNA analysis (scRNA-seq) and immune infiltration were employed to explore the immune imbalance of the diseases. By weighted gene co expression network analysis (WGCNA), we obtained hub shared genes. Furthermore, we analyzed the diagnostic performance and immune association with the hub genes. Finally, functional enrichment of miRNAs related to hub shared genes was carried out. Single-cell analysis showed a high proportion of T cells among infiltrated immune cells and immune infiltration showed CD4+ T and γδ T cells were significantly elevated in diseases. Hub shared genes, LCN2, CXCL1 and PI3 had excellent diagnostic properties and were positively correlated with neutrophils, CD4+ T and γδ T cells. IL17 and TNF signaling pathway were the common pathway. In conclusion, CD4+ and γδ T cells and hub shared genes may play a crucial part in common mechanism between psoriasis and IBD. Moreover, hub shared genes may be potential diagnostic markers.

银屑病和炎症性肠病(IBD)有相似的病因,包括T细胞的异常激活。差异表达基因(DEGs)分析用于搜索共享基因。然后进行GO(基因本体论)和KEGG(京都基因和基因组百科全书)分析。其次,采用单细胞RNA分析(scRNA-seq)和免疫浸润来探讨疾病的免疫失衡。通过加权基因共表达网络分析(WGCNA),我们获得了中枢共享基因。此外,我们还分析了中枢基因的诊断性能和免疫相关性。最后,对与中枢共享基因相关的miRNA进行了功能富集。单细胞分析显示,浸润的免疫细胞中T细胞比例较高,免疫浸润显示CD4+T和γδT细胞在疾病中显著升高。中枢共享基因LCN2、CXCL1和PI3具有良好的诊断特性,并与中性粒细胞、CD4+T和γδT细胞呈正相关。IL17和TNF信号通路是常见的信号通路。总之,CD4+和γδT细胞以及中枢共享基因可能在银屑病和IBD的共同机制中发挥关键作用。此外,中枢共享基因可能是潜在的诊断标志物。
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引用次数: 0
Study of tissue transglutaminase spliced variants expressed in THP-1 derived macrophages exhibiting distinct functional phenotypes 显示不同功能表型的THP-1衍生巨噬细胞中表达的组织转谷氨酰胺酶剪接变异体的研究。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-10-02 DOI: 10.1016/j.imbio.2023.152752
Paula Arbildi , Federico Calvo , Victoria Macías , Claudio Rodríguez-Camejo , Cecilia Sóñora , Ana Hernández

Tissue transglutaminase (TG2) expressed in monocytes and macrophage is known to participate in processes during either early and resolution stages of inflammation. The alternative splicing of tissue transglutaminase gene is a mechanism that increases its functional diversity. Four spliced variants are known with truncated C-terminal domains (TGM2_v2, TGM2_v3, TGM2_v4a, TGM2_v4b) but scarce information is available about its expression in human monocyte and macrophages.

We studied the expression of canonical TG2 (TGM2_v1) and its short spliced variants by RT-PCR during differentiation of TPH-1 derived macrophages (dTHP-1) using two protocols (condition I and II) that differ in Phorbol-12-myristate-13-acetate dose and time schedule. The production of TNF-α and IL-1β in supernatant of dTHP-1, measured by ELISA in supernatants showed higher proinflammatory milieu in condition I.

We found that the expression of all mRNA TG2 spliced variants were up-regulated during macrophage differentiation and after IFN-γ treatment of dTHP-1 cells in both conditions. Nevertheless, the relative fold increase or TGM2_v3 in relation with TGM2_v1 was higher only with the condition I.

M1/M2-like THP-1 macrophages obtained with IFN-γ/IL-4 treatments showed that the up-regulation of TGM2_v1 induced by IL-4 was higher in relation with any short spliced variants. The qualitative profile of relative contribution of spliced variants in M1/M2-like THP-1 cells showed a trend to higher expression of TGM2_v3 in the inflammatory functional phenotype.

Our results contribute to the knowledge about TG2 spliced variants in the biology of monocyte/macrophage cells and show how the differentiation conditions can alter their expression and cell function.

已知在单核细胞和巨噬细胞中表达的组织谷氨酰胺转移酶(TG2)参与炎症早期和消退阶段的过程。组织转谷氨酰胺酶基因的选择性剪接是增加其功能多样性的一种机制。已知四种具有截短的C末端结构域的剪接变体(TGM2_v2、TGM2_v3、TGM2_v4a、TGM2-v4b),但关于其在人类单核细胞和巨噬细胞中的表达的信息很少。我们通过RT-PCR研究了经典TG2(TGM2_v1)及其短剪接变体在TPH-1衍生的巨噬细胞(dTHP-1)分化过程中的表达,使用了两种方案(条件I和II),这两种方案在Phorbol-12-肉豆蔻酸酯-13-乙酸盐的剂量和时间安排上不同。在条件I下,通过ELISA测量的dTHP-1上清液中TNF-α和IL-1β的产生显示出更高的促炎环境。我们发现,在巨噬细胞分化过程中以及在两种条件下IFN-γ处理dTHP-1细胞后,所有mRNA TG2剪接变异体的表达均上调。然而,TGM2_v3相对于TGM2_v1的相对倍数增加仅在条件I时更高。用IFN-γ/IL-4处理获得的M1/M2样THP-1巨噬细胞表明,IL-4诱导的TGM2_v2的上调与任何短剪接变体有关。M1/M2-like THP-1细胞中剪接变异体的相对贡献的定性图谱显示出TGM2_v3在炎症功能表型中表达更高的趋势。我们的研究结果有助于了解单核细胞/巨噬细胞生物学中的TG2剪接变体,并显示分化条件如何改变其表达和细胞功能。
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引用次数: 0
Identification of hub biomarkers and immune-related pathways participating in the progression of Kawasaki disease by integrated bioinformatics analysis 通过综合生物信息学分析鉴定参与川崎病进展的中枢生物标志物和免疫相关途径。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-09-26 DOI: 10.1016/j.imbio.2023.152750
Yang Gao , Xuan Tang , Guanghui Qian , Hongbiao Huang , Nana Wang , Yan Wang , Wenyu Zhuo , Jiaqi Jiang , Yiming Zheng , Wenjie Li , Zhiheng Liu , Xuan Li , Lei Xu , Jiaying Zhang , Li Huang , Ying Liu , Haitao Lv

Background

Kawasaki disease (KD) is a systemic vasculitis that commonly affects children and its etiology remains unknown. Growing evidence suggests that immune-mediated inflammation and immune cells in the peripheral blood play crucial roles in the pathophysiology of KD. The objective of this research was to find important biomarkers and immune-related mechanisms implicated in KD, along with their correlation with immune cells in the peripheral blood.

Material/Methods

Gene microarray data from the Gene Expression Omnibus (GEO) was utilized in this study. Three datasets, namely GSE63881 (341 samples), GSE73463 (233 samples), and GSE73461 (279 samples), were obtained. To find intersecting genes, we employed differentially expressed genes (DEGs) analysis and weighted gene co-expression network analysis (WGCNA). Subsequently, functional annotation, construction of protein–protein interaction (PPI) networks, and Least Absolute Shrinkage and Selection Operator (LASSO) regression were performed to identify hub genes. The accuracy of these hub genes in identifying KD was evaluated using the receiver operating characteristic curve (ROC). Furthermore, Gene Set Variation Analysis (GSVA) was employed to explore the composition of circulating immune cells within the assessed datasets and their relationship with the hub gene markers.

Results

WGCNA yielded eight co-expression modules, with one hub module (MEblue module) exhibiting the strongest association with acute KD. 425 distinct genes were identified. Integrating WGCNA and DEGs yielded a total of 277 intersecting genes. By conducting LASSO analysis, five hub genes (S100A12, MMP9, TLR2, NLRC4 and ARG1) were identified as potential biomarkers for KD. The diagnostic value of these five hub genes was demonstrated through ROC curve analysis, indicating their high accuracy in diagnosing KD. Analysis of the circulating immune cell composition within the assessed datasets revealed a significant association between KD and various immune cell types, including activated dendritic cells, neutrophils, immature dendritic cells, macrophages, and activated CD8 T cells. Importantly, all five hub genes exhibited strong correlations with immune cells.

Conclusion

Activated dendritic cells, neutrophils, and macrophages were closely associated with the pathogenesis of KD. Furthermore, the hub genes (S100A12, MMP9, TLR2, NLRC4, and ARG1) are likely to participate in the pathogenic mechanisms of KD through immune-related signaling pathways.

背景:川崎病(KD)是一种常见于儿童的系统性血管炎,其病因尚不清楚。越来越多的证据表明,免疫介导的炎症和外周血中的免疫细胞在KD的病理生理学中起着至关重要的作用。本研究的目的是寻找与KD相关的重要生物标志物和免疫相关机制,以及它们与外周血免疫细胞的相关性。材料/方法:本研究使用来自基因表达综合库(GEO)的基因微阵列数据。获得了三个数据集,即GSE63881(341个样本)、GSE73463(233个样本)和GSE73461(279个样本)。为了找到交叉基因,我们采用了差异表达基因(DEGs)分析和加权基因共表达网络分析(WGCNA)。随后,进行了功能注释、蛋白质-蛋白质相互作用(PPI)网络的构建和最小绝对收缩和选择算子(LASSO)回归,以鉴定枢纽基因。使用受体操作特征曲线(ROC)评估这些枢纽基因在鉴定KD中的准确性。此外,采用基因集变异分析(GSVA)来探索评估数据集中循环免疫细胞的组成及其与中枢基因标记物的关系。结果:WGCNA产生了8个共表达模块,其中一个枢纽模块(MEblue模块)与急性KD表现出最强的相关性。共鉴定出425个不同的基因。整合WGCNA和DEG共产生277个交叉基因。通过LASSO分析,5个枢纽基因(S100A12、MMP9、TLR2、NLRC4和ARG1)被鉴定为KD的潜在生物标志物。ROC曲线分析证明了这五个枢纽基因的诊断价值,表明它们在诊断KD方面具有较高的准确性。对评估数据集中循环免疫细胞组成的分析显示,KD与各种免疫细胞类型之间存在显著关联,包括活化的树突状细胞、中性粒细胞、未成熟的树突状细胞,巨噬细胞和活化的CD8 T细胞。重要的是,所有五个中枢基因都表现出与免疫细胞的强烈相关性。结论:活化的树突状细胞、中性粒细胞和巨噬细胞与KD的发病机制密切相关。此外,中枢基因(S100A12、MMP9、TLR2、NLRC4和ARG1)可能通过免疫相关信号通路参与KD的致病机制。
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引用次数: 0
Identification and validation of a novel NK cells-related signature to predict prognosis and immune microenvironment in LUAD 一种新的NK细胞相关信号的鉴定和验证,用于预测LUAD的预后和免疫微环境。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-09-23 DOI: 10.1016/j.imbio.2023.152751
Chenghu Song , Weici Liu , Guanyu Jiang , Zhao He , Ruixin Wang , Xiaokun Wang , Ruo Chen , Wenjun Mao , Shaojin Zhu

Background

The prevalence and fatality rates of lung cancer are experiencing a rapid escalation. Natural Killer (NK) cells have been established to have a crucial role in both tumor initiation and progression. Nevertheless, uncertainties persist regarding their precise implications in the prognosis of LUAD.

Methods

The data were obtained from reputable sources, such as the Cancer Genome Atlas (TCGA), Gene Expression Omnibus (GEO) database, and our internally generated sequencing data. Utilizing the TCGA data as a background, we selected intersecting genes, validated by cluster analysis, to establish a Cox model and validated it using the GEO datasets. Furthermore, we conducted extensive analyses to investigate the significance of potential biomarkers in relation to immune cell infiltration, single-cell data, differential gene expression, and drug sensitivity.

Results

67 immune-related genes associated with NK cells (NK-IRGs) were identified in the TCGA datasets, whose research potential was demonstrated by cluster analysis. A prognostic signature was identified utilizing the univariate and multivariate Cox model, resulting in the identification of five genes, which was validated using GEO datasets. Additionally, the nomogram's calibration curve demonstrated exceptional concordance between the projected and actual survival rates. Subsequent investigations uncovered that this prognostic signature demonstrated its independence as a risk factor. Notably, in the low-risk group, NK cells exhibited elevated levels of immune checkpoint molecules, indicating heightened sensitivity to immune therapy. These findings highlight the potential of utilizing this signature as a valuable tool in the selection of patients who could benefit from targeted immune interventions.

背景:癌症的发病率和死亡率正在迅速上升。自然杀伤细胞(NK)已被证实在肿瘤的发生和发展中起着至关重要的作用。然而,关于其对LUAD预后的确切影响,仍存在不确定性。方法:数据来自著名来源,如癌症基因组图谱(TCGA)、基因表达综合数据库(GEO)和我们内部生成的测序数据。利用TCGA数据作为背景,我们选择交叉基因,通过聚类分析进行验证,建立Cox模型,并使用GEO数据集进行验证。此外,我们进行了广泛的分析,以研究潜在生物标志物在免疫细胞浸润、单细胞数据、差异基因表达和药物敏感性方面的意义。结果:在TCGA数据集中鉴定出67个与NK细胞相关的免疫相关基因,聚类分析显示了其研究潜力。利用单变量和多变量Cox模型确定了预后特征,从而确定了五个基因,并使用GEO数据集进行了验证。此外,列线图的校准曲线显示了预测存活率和实际存活率之间的异常一致性。随后的研究发现,这种预后标志表明其作为一个风险因素的独立性。值得注意的是,在低风险组中,NK细胞表现出免疫检查点分子水平升高,表明对免疫治疗的敏感性增强。这些发现突出了利用这一特征作为一种有价值的工具来选择可以从靶向免疫干预中受益的患者的潜力。
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引用次数: 0
Alterations in Helios+ T cell subsets in peripheral blood of early-stage lung adenocarcinoma patients: Implications for early diagnosis 早期肺腺癌患者外周血Helios+T细胞亚群的变化:对早期诊断的意义。
IF 2.8 4区 医学 Q3 IMMUNOLOGY Pub Date : 2023-09-22 DOI: 10.1016/j.imbio.2023.152749
Yiming Zhao , Ming Zhao , Meng Li , Xiancan Ma , Mohan Zheng , Yuying Nie , Yaoyi Zhu , Jiaxin Ren , Ainizati Hasimu , Zihang Yuan , Qi Li , Ayibaota Bahabayi , Zhonghui Zhang , Xingyue Zeng , Chen Liu

Objective

This study aimed to investigate the changes and significance of circulating Helios-associated T cell subsets in patients with early-stage lung adenocarcinoma (LUAD).

Methods

Blood samples were collected from 35 healthy controls and 34 patients with early-stage LUAD. Flow cytometry was used to analyze various CD4+ T cell subsets, including regulatory T(Treg) cells, follicular regulatory T(Tfr) cells, follicular helper T (Tfh) cells, and conventional T (con-T) cells. Correlation analysis was conducted to investigate the association of Helios-related subsets with clinical indicators. The ROC curve was used to explore the potential clinical value of Helios+ T cell subsets in the screening of patients with early LUAD. Fifteen of these patients were tracked after lung cancer resection and changes in Helios+ T cell subsets before and after treatment were analyzed.

Results

The percentage and absolute number of Tregs were up-regulated in LUAD patients while Tfh and con-T cells expressing Helios were down-regulated. Absolute counts of Tfr and con-T cells and Helios expression in Tfr and Treg decreased significantly after resection. Helios+ Tfh and con-T were negatively correlated with certain tumor markers. Areas under the curve (AUCs) of percentages and absolute counts of Helios+ Tfh, Treg, Tfr and con-T cells to distinguish early LUAD from healthy individuals were 0.7277, 0.5697, 0.5718, 0.7210 (percentages), 0.7336, 0.7378, 0.5908 and 0.7445(absolute numbers), respectively.

Conclusion

Helios+ T cell subsets in peripheral blood of early-stage LUAD patients has changed significantly, which may be related to the pathogenesis of LUAD and could help for early diagnosis of LUAD.

目的:探讨早期肺腺癌(LUAD)患者循环Helios相关T细胞亚群的变化及其意义。流式细胞术用于分析各种CD4+T细胞亚群,包括调节性T细胞(Treg)、卵泡调节性T(Tfr)细胞、卵泡辅助T细胞(Tfh)和常规T细胞(con-T)。进行相关性分析以研究Helios相关亚群与临床指标的相关性。ROC曲线用于探索Helios+T细胞亚群在筛查早期LUAD患者中的潜在临床价值。其中15例患者在癌症切除术后进行了追踪,并分析了治疗前后Helios+T细胞亚群的变化。结果:LUAD患者Tregs的百分比和绝对数量上调,而表达Helios的Tfh和con-T细胞则下调。切除后,Tfr和con-T细胞的绝对计数以及Tfr和Treg中Helios的表达显著下降。Helios+Tfh和con-T与某些肿瘤标志物呈负相关。Helios+Tfh、Treg、Tfr和con-T细胞的百分比和绝对计数的曲线下面积(AUCs)分别为0.7277、0.5697、0.5718、0.7210(百分比)、0.7336、0.7378、0.5908和0.7445(绝对数),以区分早期LUAD和健康个体。结论:早期LUAD患者外周血Helios+T细胞亚群发生明显变化,可能与LUAD的发病机制有关,有助于LUAD的早期诊断。
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引用次数: 0
期刊
Immunobiology
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