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2013 IEEE International Conference on Medical Imaging Physics and Engineering最新文献

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Elastic image registration of MR/TRUS for targeted prostate biopsy MR/TRUS在前列腺活检中的弹性图像配准
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864544
Jian-hua Gao, F. Zhou, Bo Liu
In order to provide prostate biopsy operators with information from pre-operative MR images, MR images must be transformed accurately to the Transrectal Ultrasound (TRUS) real-time images. In our work, we used the well-known Robust Points Matching (RPM) algorithm to find the corresponding point pairs from the prostate contours of MR and TRUS and the thin plate splines (TPS) to transform MRI to TRUS images elastically. Compared with choosing landmarks based on key structures adopted by Nasr Makni[11], we find generating point sets by down-sampling the manual delineated contours in two modality images is much more robust and easier, as it depends little on the experience of operators as well as the quality of clinical ultrasound imaging. Using data acquired from 5 patients, the mean DSC (Disc Similarity Coefficient) we get after performing RPM-TPS registration was 79.43%, compared to the 60.20% got by the manual rigid registration.
为了向前列腺活检操作者提供术前MR图像的信息,必须将MR图像准确地转换为经直肠超声(TRUS)实时图像。在我们的工作中,我们使用著名的鲁棒点匹配(RPM)算法从MR和TRUS的前列腺轮廓中找到相应的点对,并使用薄板样条(TPS)将MRI图像弹性地转换为TRUS图像。与Nasr Makni[11]采用的基于关键结构选择地标相比,我们发现通过对两幅模态图像中手动勾画的轮廓进行下采样来生成点集更加鲁棒和简单,因为它对操作员的经验和临床超声成像的质量依赖较小。使用5例患者的数据,我们进行RPM-TPS注册后获得的平均DSC(椎间盘相似系数)为79.43%,而手工刚性注册获得的DSC为60.20%。
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引用次数: 0
An automatic 3D detection method of seeds on CT images 一种CT图像上种子三维自动检测方法
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864542
Hannong Lu, Zheng Cuan, F. Zhou, Bo Liu
Post-implant dosimetric evaluation is a key procedure of brachytherapy. The way of traditional manual localizing seed is lack of efficiency. Therefore, Automatic seed detection method is needed to efficiently and accurately calculate the centroid and orientation. There are some shape differences among seeds, caused by imaging features. Single seed may be presented on more than one slice and seeds locating closely may appear connected. This paper proposed an automatic three-dimensional detection method of seeds on CT images. Firstly, the areas possibly containing seeds are got by binary threshold on each CT slice and the related geometric information was recorded. Then, the larger areas containing more than one seed are segmented by watershed algorithm. According to the max seed volume rule and straight line rule, the areas are connected into the complete seed volume and the weighted centroid and orientation are calculated. The statistical analysis demonstrates that the rate of seed detection can achieve 97% and has a high applicability of post-implant dosimetric verification.
植入后剂量评估是近距离治疗的关键步骤。传统的人工种子定位方法效率较低。因此,需要采用种子自动检测方法来高效、准确地计算种子的质心和方位。由于成像特征,种子之间存在一些形状差异。单个种子可以呈现在多个切片上,位置紧密的种子可能看起来是连接的。提出了一种基于CT图像的种子三维自动检测方法。首先,利用二值阈值在每个CT切片上得到可能含有种子的区域,并记录相应的几何信息;然后,采用分水岭算法对包含多个种子的较大区域进行分割。根据最大种子体积规则和直线规则,将区域连接成完整的种子体积,计算加权质心和方向。统计分析表明,种子检出率可达97%,具有较高的种植后剂量学验证适用性。
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引用次数: 0
Photoacoustic and thermoacoustic imaging application in joint imaging 光声和热声成像在关节成像中的应用
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864554
Jing Xiang-yu, Rong Jian, Zhong Xiaochun, Gao Yi, Huang Lin, Li Tingting
This paper presents preliminary in vitro experimental studies in imaging of the same joint using laser-based photoacoustic imaging and microwave-based thermoacoustic imaging. In this pilot study, the experiments were conducted on the same chicken claw joint in vitro, and a delay-and-sum algorithm was used to reconstruct the two-dimensional (2D) photoacoustic and thermoacoustic images. In the future, integrating the two imaging modalities into a system, which combines the merits of two imaging modalities, has potential to provide an effective approach of tissue structure and functional images to study the architectures, physiological and pathological properties and metabolisms of joint tissues.
本文介绍了基于激光光声成像和基于微波热声成像的同一关节体外成像的初步实验研究。在本中试研究中,我们对同一离体鸡爪关节进行了实验,并使用延迟和算法重建了二维(2D)光声和热声图像。在未来,将两种成像方式整合成一个系统,结合两种成像方式的优点,有可能为研究关节组织的结构、生理病理特性和代谢提供一种有效的组织结构和功能图像方法。
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引用次数: 2
A FEM method for magnetic induction tomography forward problem 磁感应层析成像正演问题的有限元方法
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864538
Yang Xuan, Xu Wang, Cheng'an Liu, Dan Yang
This paper is focus on the forward problem of 3-D magnetic induction tomography. Finite element method (FEM) has been used to analyse and calculate the problem. The analysis process performed by ANSYS software. First, we establish a 3-D solid model of magnetic imaging system. Then we mesh it to FE model by meshing tools. Using, the A̅, A̅ - φ method to indicate governing equation for reducing calculated amount. A̅ is magnetic vector potential, and A̅ is electric scalar potential. The discrete equations are Established by Galekin finite element discretization format, and solve them by using sparse matrix direct solution. In order to study the influence on the results of meshing density, this paper uses 3 different meshing methods for comparing and analyzing results. Simulation results show that the meshing density affects the results in different ways. Although the absolute values of SCR are changed, but the linear relation between SCR and conductivity is good.
本文主要研究三维磁感应层析成像的正演问题。采用有限元法对该问题进行了分析和计算。分析过程采用ANSYS软件进行。首先,建立了磁成像系统的三维实体模型。然后通过网格划分工具将其划分为FE模型。采用A′s、A′s - φ法表示控制方程,减少计算量。A′是磁矢量势,A′是电标量势。采用Galekin有限元离散化格式建立离散方程,并采用稀疏矩阵直接解进行求解。为了研究网格密度对结果的影响,本文采用3种不同的网格划分方法对结果进行对比分析。仿真结果表明,网格密度对结果有不同的影响。虽然可控硅的绝对值发生了变化,但可控硅与电导率之间的线性关系良好。
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引用次数: 1
A software development of DICOM image processing based on QT, VTK and ITK 基于QT、VTK和ITK的DICOM图像处理软件开发
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864541
Sun Mengmeng, W. Shuicai
To display and process images in different DICOM formats, this article introduces a new method of integrating ITK, VTK and QT to process the images in DICOM format, and a software was designed based on the three tools. The results indicate that this software can read and display DICOM images with different suffixes and can process medical images simply.
为了显示和处理不同DICOM格式的图像,本文介绍了一种集成ITK、VTK和QT来处理DICOM格式图像的新方法,并基于这三种工具设计了一个软件。结果表明,该软件可以读取和显示不同后缀的DICOM图像,并且可以简单地处理医学图像。
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引用次数: 6
Study of color matching system for porcelain teeth 瓷牙配色系统的研究
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864558
Jihong Liu, Na Zhao, Runnan He
Objective: To design and build up a computer-aided color matching system for porcelain tooth, which could offer dentists an objective suggestion for selecting the color of the patient's tooth. Methods: The color matching system is mainly based on image analyzing and processing techniques and pattern recognition methods. This system uses HSI color space to compare and calculate colors. The system consists of five parts, which are image acquisition facility, image processing part, tooth color classification module, color mixture module and a template library. This system uses image analyzing technology to find out tooth image's color feature and then look it up in the template library to get the standard term of this tooth's color using pattern recognition methods. Results and discussions: Firstly, we use the minimum distance classifier and do two experiments with three tooth models of the identifier 0M1, 3M2 and 5M1. In the first experiment, we take 20 pictures as samples for each tooth model, setting the first 5 pictures as training samples and the last 5 pictures as testing samples. The recognition rate is 66.7%. In the second experiment, we use the former 10 pictures of each tooth model as training samples and the other 10 pictures as testing samples. The recognition is 90%. In addition, we use KNN classifier to test the above test datasets, but the recognition rates are obviously lower than those obtained by the minimum distance classifier. Conclusions: The tools and processing platform used in this experiment are simple and efficient. The recognition rate of this color matching system is good and accepted.
目的:设计并建立烤瓷牙计算机辅助配色系统,为牙医师选择患者牙色提供客观建议。方法:色彩匹配系统主要基于图像分析处理技术和模式识别方法。该系统使用HSI色彩空间来比较和计算颜色。该系统由图像采集设备、图像处理部分、牙齿颜色分类模块、颜色混合模块和模板库五个部分组成。该系统利用图像分析技术找出牙齿图像的颜色特征,然后在模板库中查找,利用模式识别方法得到牙齿颜色的标准项。结果与讨论:首先,我们使用最小距离分类器,对标识符0M1、3M2和5M1的三种牙齿模型进行了两次实验。在第一个实验中,我们对每个牙齿模型取20张图片作为样本,将前5张图片设置为训练样本,后5张图片设置为测试样本。识别率为66.7%。在第二个实验中,我们使用每个牙齿模型的前10张图片作为训练样本,另外10张图片作为测试样本。识别率为90%。此外,我们使用KNN分类器对上述测试数据集进行了测试,但识别率明显低于最小距离分类器的识别率。结论:本实验使用的工具和加工平台简单、高效。该配色系统的识别率较好,为人们所接受。
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引用次数: 4
Extraction and analysis of EEG features under electric stimulation 电刺激下脑电特征的提取与分析
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864546
Yi Liu, Xiaoming Wu, Mingku Feng
In the paper, the EEG features under electrical stimulation is studied. After analysis the data that collected in experiment by the method of wavelet entropy and complexity, we found that electrical stimulation can obviously change the complexity of brain signals, and the wavelet energy entropy of its brain signals have notable changes as well. According the result of coherence estimation, it is found that electrical stimulation has notable effects to brain. It provides a new method to study the influence to brain by electrical simulation that used in rehabilitation of hemiplegic patients with stroke.
本文研究了电刺激下的脑电特征。用小波熵和复杂度的方法对实验采集的数据进行分析,发现电刺激可以明显改变脑信号的复杂度,其脑信号的小波能量熵也有明显的变化。根据相干性估计结果,发现电刺激对大脑有显著的影响。为脑卒中偏瘫患者脑电模拟康复研究提供了一种新的方法。
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引用次数: 2
Accurate segmentation for right ventricles based on affinity propagation clustering and multi-Atlas selection 基于亲和传播聚类和多图谱选择的右心室精确分割
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864528
Yaonan Zhang, Qian Song, Chuanshen Chen, X. Meng
Due to the unique characteristics of right ventricle, such as volatile, thin wall, unobvious boundary, multi-Atlas algorithm is appropriate for its segmentation. However, most of the existing Atlas select methods are based on choosing Atlas after registering, while the registering is time consuming and reduce the segmentation performance. For this reasons, we introduce a new Multi-Atlas selection method based on affinity propagation clustering algorithm. Firstly, see all Atlas images as a series of data points, clustering them through message propagation. Secondly, register all the clustering centre images to target image, getting deformation markers results by STAPLE label fusion. Finally, sort all the fusion results by dice similarity coefficient. Register and fusion the clustering center images which own the biggest dice similarity coefficient. Furthermore, repeating the process above until get accurate segmentation. Experiment results show that the proposed method can segment right ventricle effectively. Compared to the traditional selection ways, segmentation accuracy has been greatly improved through this method.
由于右心室易变、壁薄、边界不明显等独特的特点,多atlas算法适合对其进行分割。然而,现有的图集选择方法大多是基于注册后选择图集,注册费时且降低了分割性能。为此,我们提出了一种新的基于亲和性传播聚类算法的多图谱选择方法。首先,将所有Atlas图像视为一系列数据点,通过消息传播对它们进行聚类。其次,将所有聚类中心图像配准到目标图像,通过STAPLE标签融合得到变形标记结果;最后,根据骰子相似系数对所有融合结果进行排序。对骰子相似系数最大的聚类中心图像进行配准和融合。进一步,重复上述过程,直到得到准确的分割。实验结果表明,该方法可以有效地分割右心室。与传统的选择方法相比,该方法大大提高了分割精度。
{"title":"Accurate segmentation for right ventricles based on affinity propagation clustering and multi-Atlas selection","authors":"Yaonan Zhang, Qian Song, Chuanshen Chen, X. Meng","doi":"10.1109/ICMIPE.2013.6864528","DOIUrl":"https://doi.org/10.1109/ICMIPE.2013.6864528","url":null,"abstract":"Due to the unique characteristics of right ventricle, such as volatile, thin wall, unobvious boundary, multi-Atlas algorithm is appropriate for its segmentation. However, most of the existing Atlas select methods are based on choosing Atlas after registering, while the registering is time consuming and reduce the segmentation performance. For this reasons, we introduce a new Multi-Atlas selection method based on affinity propagation clustering algorithm. Firstly, see all Atlas images as a series of data points, clustering them through message propagation. Secondly, register all the clustering centre images to target image, getting deformation markers results by STAPLE label fusion. Finally, sort all the fusion results by dice similarity coefficient. Register and fusion the clustering center images which own the biggest dice similarity coefficient. Furthermore, repeating the process above until get accurate segmentation. Experiment results show that the proposed method can segment right ventricle effectively. Compared to the traditional selection ways, segmentation accuracy has been greatly improved through this method.","PeriodicalId":135461,"journal":{"name":"2013 IEEE International Conference on Medical Imaging Physics and Engineering","volume":"10 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"121828662","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
A texture feature analysis for diagnosis of pulmonary nodules using LIDC-IDRI database 基于LIDC-IDRI数据库的肺结节纹理特征分析
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864494
Fangfang Han, Guopeng Zhang, Huafeng Wang, Bowen Song, Hongbing Lu, Dazhe Zhao, Hong Zhao, Zhengrong Liang
This paper evaluated the performance of two-dimensional (2D) and 3D texture features from CT images on pulmonary nodules diagnosis using the large database LIDC-IDRI. Total of 905 nodules (422 malignant and 483 benign) with certain expert observer ratings of malignancy were extracted from the database based on the radiologists' painting boundaries. Feature analysis on the extracted nodules was not only based on the popular texture analysis method, e.g., the 2D Haralick texture feature model, we also explored a 3D Haralick feature model with variable directions in space. The relationships of more neighbour voxels on more directions were included for texture feature analysis. The well-established Support Vector Machine (SVM) classifier was used for the malignancy classification based on the 2D and 3D Haralick texture features. Half of the benign and malignant nodules were extracted randomly for training, and the left half nodules for testing. This operation was implemented for 100 iterations. Then the 100 classification results were shown based on the area under the curve (AUC) of the Receiver Operating Characteristics (ROC). The distinguishing results on the nodule malignancy based on the 3D Haralick texture features (Az = 0.9441) is noticeably more consistent with the expert observer ratings than that on the 2D features (Az = 0.9372).
本文利用大型数据库LIDC-IDRI评估了CT图像二维(2D)和三维纹理特征在肺结节诊断中的表现。根据放射科医师的绘画边界,从数据库中提取出具有一定专家观察评分的905个结节(422个为恶性结节,483个为良性结节)。对提取的结节进行特征分析,不仅基于常用的纹理分析方法,如二维Haralick纹理特征模型,还探索了空间上变方向的三维Haralick特征模型。将更多相邻体素在更多方向上的关系纳入纹理特征分析。基于二维和三维Haralick纹理特征,采用完善的支持向量机分类器进行恶性肿瘤分类。随机抽取一半的良恶性结节进行训练,左半部分的结节进行检测。该操作实现了100次迭代。然后根据受试者工作特征(ROC)曲线下面积(AUC)显示100个分类结果。基于三维Haralick纹理特征(Az = 0.9441)的结节恶性判别结果与专家观察者评分的一致性明显高于基于二维特征(Az = 0.9372)。
{"title":"A texture feature analysis for diagnosis of pulmonary nodules using LIDC-IDRI database","authors":"Fangfang Han, Guopeng Zhang, Huafeng Wang, Bowen Song, Hongbing Lu, Dazhe Zhao, Hong Zhao, Zhengrong Liang","doi":"10.1109/ICMIPE.2013.6864494","DOIUrl":"https://doi.org/10.1109/ICMIPE.2013.6864494","url":null,"abstract":"This paper evaluated the performance of two-dimensional (2D) and 3D texture features from CT images on pulmonary nodules diagnosis using the large database LIDC-IDRI. Total of 905 nodules (422 malignant and 483 benign) with certain expert observer ratings of malignancy were extracted from the database based on the radiologists' painting boundaries. Feature analysis on the extracted nodules was not only based on the popular texture analysis method, e.g., the 2D Haralick texture feature model, we also explored a 3D Haralick feature model with variable directions in space. The relationships of more neighbour voxels on more directions were included for texture feature analysis. The well-established Support Vector Machine (SVM) classifier was used for the malignancy classification based on the 2D and 3D Haralick texture features. Half of the benign and malignant nodules were extracted randomly for training, and the left half nodules for testing. This operation was implemented for 100 iterations. Then the 100 classification results were shown based on the area under the curve (AUC) of the Receiver Operating Characteristics (ROC). The distinguishing results on the nodule malignancy based on the 3D Haralick texture features (Az = 0.9441) is noticeably more consistent with the expert observer ratings than that on the 2D features (Az = 0.9372).","PeriodicalId":135461,"journal":{"name":"2013 IEEE International Conference on Medical Imaging Physics and Engineering","volume":" 15","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"114051233","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 50
Human surface EHG acquisition and analysis system based on DM6446 基于DM6446的人体体表EHG采集与分析系统
Pub Date : 2013-10-01 DOI: 10.1109/ICMIPE.2013.6864548
Ping Tao, Weifeng Liu, Xiaoying Tang
In this paper an EHG signal acquisition and processing system has been designed, it adopted TMS320DM6446 chip to be the master controller and a new mechanism of communication between ARM and DSP is also designed for TMS320DM6446. The EHG signal was directly collected by ADS1298 chip, after preprocessing and wavelet analysis, the signal was compared with the normal EHG signal from the pregnant women who childbirth smooth, the result can predict if the pregnant is in danger of premature and dystocia.
本文设计了一种EHG信号采集与处理系统,该系统采用TMS320DM6446芯片作为主控制器,并在TMS320DM6446芯片上设计了一种新的ARM与DSP通信机制。通过ADS1298芯片直接采集EHG信号,经过预处理和小波分析,与顺利分娩孕妇的正常EHG信号进行比较,结果可以预测孕妇是否有早产和难产的危险。
{"title":"Human surface EHG acquisition and analysis system based on DM6446","authors":"Ping Tao, Weifeng Liu, Xiaoying Tang","doi":"10.1109/ICMIPE.2013.6864548","DOIUrl":"https://doi.org/10.1109/ICMIPE.2013.6864548","url":null,"abstract":"In this paper an EHG signal acquisition and processing system has been designed, it adopted TMS320DM6446 chip to be the master controller and a new mechanism of communication between ARM and DSP is also designed for TMS320DM6446. The EHG signal was directly collected by ADS1298 chip, after preprocessing and wavelet analysis, the signal was compared with the normal EHG signal from the pregnant women who childbirth smooth, the result can predict if the pregnant is in danger of premature and dystocia.","PeriodicalId":135461,"journal":{"name":"2013 IEEE International Conference on Medical Imaging Physics and Engineering","volume":"378 1","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2013-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"122508725","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
期刊
2013 IEEE International Conference on Medical Imaging Physics and Engineering
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