首页 > 最新文献

Inflammation Research最新文献

英文 中文
The NADase CD38 is a central regulator in gouty inflammation and a novel druggable therapeutic target. NAD 酶 CD38 是痛风性炎症的核心调节因子,也是一种新型药物治疗靶点。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-03-16 DOI: 10.1007/s00011-024-01863-y
Paulo Gil Alabarse, Patricia Oliveira, Huaping Qin, Tiffany Yan, Marie Migaud, Robert Terkeltaub, Ru Liu-Bryan

Objectives: Cellular NAD+ declines in inflammatory states associated with increased activity of the leukocyte-expressed NADase CD38. In this study, we tested the potential role of therapeutically targeting CD38 and NAD+ in gout.

Methods: We studied cultured mouse wild type and CD38 knockout (KO) murine bone marrow derived macrophages (BMDMs) stimulated by monosodium urate (MSU) crystals and used the air pouch gouty inflammation model.

Results: MSU crystals induced CD38 in BMDMs in vitro, associated with NAD+ depletion, and IL-1β and CXCL1 release, effects reversed by pharmacologic CD38 inhibitors (apigenin, 78c). Mouse air pouch inflammatory responses to MSU crystals were blunted by CD38 KO and apigenin. Pharmacologic CD38 inhibition suppressed MSU crystal-induced NLRP3 inflammasome activation and increased anti-inflammatory SIRT3-SOD2 activity in macrophages. BMDM RNA-seq analysis of differentially expressed genes (DEGs) revealed CD38 to control multiple MSU crystal-modulated inflammation pathways. Top DEGs included the circadian rhythm modulator GRP176, and the metalloreductase STEAP4 that mediates iron homeostasis, and promotes oxidative stress and NF-κB activation when it is overexpressed.

Conclusions: CD38 and NAD+ depletion are druggable targets controlling the MSU crystal- induced inflammation program. Targeting CD38 and NAD+ are potentially novel selective molecular approaches to limit gouty arthritis.

目的:细胞中的 NAD+ 在炎症状态下会减少,同时白细胞表达的 NAD 酶 CD38 的活性也会增加。在这项研究中,我们测试了以 CD38 和 NAD+ 为治疗靶点在痛风中的潜在作用:我们研究了在单钠尿酸盐(MSU)结晶刺激下培养的小鼠野生型和 CD38 基因敲除(KO)小鼠骨髓衍生巨噬细胞(BMDMs),并使用气囊痛风炎症模型:结果:MSU 晶体在体外诱导 BMDMs 中的 CD38,与 NAD+ 耗竭、IL-1β 和 CXCL1 释放有关,药物 CD38 抑制剂(芹菜素、78c)可逆转这些效应。CD38 KO 和芹菜素能减弱小鼠气囊对 MSU 晶体的炎症反应。药物 CD38 抑制剂抑制了 MSU 晶体诱导的 NLRP3 炎性体活化,并提高了巨噬细胞中抗炎性 SIRT3-SOD2 的活性。BMDM差异表达基因(DEGs)的RNA-seq分析显示,CD38控制着多种由MSU晶体调控的炎症通路。最主要的 DEGs 包括昼夜节律调节因子 GRP176 和金属还原酶 STEAP4,后者介导铁的稳态,并在过度表达时促进氧化应激和 NF-κB 的活化:结论:CD38和NAD+消耗是控制MSU晶体诱导的炎症程序的药物靶点。以CD38和NAD+为靶点可能是限制痛风性关节炎的新型选择性分子方法。
{"title":"The NADase CD38 is a central regulator in gouty inflammation and a novel druggable therapeutic target.","authors":"Paulo Gil Alabarse, Patricia Oliveira, Huaping Qin, Tiffany Yan, Marie Migaud, Robert Terkeltaub, Ru Liu-Bryan","doi":"10.1007/s00011-024-01863-y","DOIUrl":"10.1007/s00011-024-01863-y","url":null,"abstract":"<p><strong>Objectives: </strong>Cellular NAD<sup>+</sup> declines in inflammatory states associated with increased activity of the leukocyte-expressed NADase CD38. In this study, we tested the potential role of therapeutically targeting CD38 and NAD<sup>+</sup> in gout.</p><p><strong>Methods: </strong>We studied cultured mouse wild type and CD38 knockout (KO) murine bone marrow derived macrophages (BMDMs) stimulated by monosodium urate (MSU) crystals and used the air pouch gouty inflammation model.</p><p><strong>Results: </strong>MSU crystals induced CD38 in BMDMs in vitro, associated with NAD<sup>+</sup> depletion, and IL-1β and CXCL1 release, effects reversed by pharmacologic CD38 inhibitors (apigenin, 78c). Mouse air pouch inflammatory responses to MSU crystals were blunted by CD38 KO and apigenin. Pharmacologic CD38 inhibition suppressed MSU crystal-induced NLRP3 inflammasome activation and increased anti-inflammatory SIRT3-SOD2 activity in macrophages. BMDM RNA-seq analysis of differentially expressed genes (DEGs) revealed CD38 to control multiple MSU crystal-modulated inflammation pathways. Top DEGs included the circadian rhythm modulator GRP176, and the metalloreductase STEAP4 that mediates iron homeostasis, and promotes oxidative stress and NF-κB activation when it is overexpressed.</p><p><strong>Conclusions: </strong>CD38 and NAD<sup>+</sup> depletion are druggable targets controlling the MSU crystal- induced inflammation program. Targeting CD38 and NAD<sup>+</sup> are potentially novel selective molecular approaches to limit gouty arthritis.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"739-751"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11058052/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140140204","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Author Correction: Porphyromonas gingivalis promotes the progression of oral squamous cell carcinoma by stimulating the release of neutrophil extracellular traps in the tumor immune microenvironment. 作者更正:牙龈卟啉单胞菌通过刺激肿瘤免疫微环境中中性粒细胞胞外捕获物的释放,促进口腔鳞状细胞癌的进展。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 DOI: 10.1007/s00011-024-01872-x
Zhi-Chen Guo, Si-Li Jing, Xin-Yu Jia, Sadam Ahmed Elayah, Lin-Yang Xie, Hao Cui, Jun-Bo Tu, Si-Jia Na
{"title":"Author Correction: Porphyromonas gingivalis promotes the progression of oral squamous cell carcinoma by stimulating the release of neutrophil extracellular traps in the tumor immune microenvironment.","authors":"Zhi-Chen Guo, Si-Li Jing, Xin-Yu Jia, Sadam Ahmed Elayah, Lin-Yang Xie, Hao Cui, Jun-Bo Tu, Si-Jia Na","doi":"10.1007/s00011-024-01872-x","DOIUrl":"10.1007/s00011-024-01872-x","url":null,"abstract":"","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"707-708"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140174526","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Bridging the divide: unveiling mutual immunological pathways of cancer and pregnancy. 弥合鸿沟:揭示癌症与妊娠的相互免疫途径。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-03-16 DOI: 10.1007/s00011-024-01866-9
Teodora Maria Toadere, Andra Ţichindeleanu, Daniela Andreea Bondor, Ioan Topor, Şerban Ellias Trella, Iuliana Nenu

The juxtaposition of two seemingly disparate physiological phenomena within the human body-namely, cancer and pregnancy-may offer profound insights into the intricate interplay between malignancies and the immune system. Recent investigations have unveiled striking similarities between the pivotal processes underpinning fetal implantation and successful gestation and those governing tumor initiation and progression. Notably, a confluence of features has emerged, underscoring parallels between the microenvironment of tumors and the maternal-fetal interface. These shared attributes encompass establishing vascular networks, cellular mobilization, recruitment of auxiliary tissue components to facilitate continued growth, and, most significantly, the orchestration of immune-suppressive mechanisms.Our particular focus herein centers on the phenomenon of immune suppression and its protective utility in both of these contexts. In the context of pregnancy, immune suppression assumes a paramount role in shielding the semi-allogeneic fetus from the potentially hostile immune responses of the maternal host. In stark contrast, in the milieu of cancer, this very same immunological suppression fosters the transformation of the tumor microenvironment into a sanctuary personalized for the neoplastic cells.Thus, the striking parallels between the immunosuppressive strategies deployed during pregnancy and those co-opted by malignancies offer a tantalizing reservoir of insights. These insights promise to inform novel avenues in the realm of cancer immunotherapy. By harnessing our understanding of the immunological events that detrimentally impact fetal development, a knowledge grounded in the context of conditions such as preeclampsia or miscarriage, we may uncover innovative immunotherapeutic strategies to combat cancer.

癌症和妊娠这两种看似截然不同的人体生理现象的并置,或许能让人深刻了解恶性肿瘤和免疫系统之间错综复杂的相互作用。最近的研究揭示了胎儿着床和成功妊娠的关键过程与肿瘤发生和发展的关键过程之间惊人的相似之处。值得注意的是,肿瘤的微环境与母胎界面之间出现了相似之处。这些共同特征包括血管网络的建立、细胞动员、辅助组织成分的招募以促进持续生长,以及最重要的免疫抑制机制的协调。在妊娠期,免疫抑制在保护半异体胎儿免受母体宿主潜在的敌对免疫反应方面发挥着至关重要的作用。与此形成鲜明对比的是,在癌症环境中,同样的免疫抑制促使肿瘤微环境转变为肿瘤细胞的庇护所。这些见解有望为癌症免疫疗法领域提供新的思路。通过利用我们对不利于胎儿发育的免疫事件的了解--这种了解是以子痫前期或流产等情况为基础的--我们可能会发现创新的免疫治疗策略来对抗癌症。
{"title":"Bridging the divide: unveiling mutual immunological pathways of cancer and pregnancy.","authors":"Teodora Maria Toadere, Andra Ţichindeleanu, Daniela Andreea Bondor, Ioan Topor, Şerban Ellias Trella, Iuliana Nenu","doi":"10.1007/s00011-024-01866-9","DOIUrl":"10.1007/s00011-024-01866-9","url":null,"abstract":"<p><p>The juxtaposition of two seemingly disparate physiological phenomena within the human body-namely, cancer and pregnancy-may offer profound insights into the intricate interplay between malignancies and the immune system. Recent investigations have unveiled striking similarities between the pivotal processes underpinning fetal implantation and successful gestation and those governing tumor initiation and progression. Notably, a confluence of features has emerged, underscoring parallels between the microenvironment of tumors and the maternal-fetal interface. These shared attributes encompass establishing vascular networks, cellular mobilization, recruitment of auxiliary tissue components to facilitate continued growth, and, most significantly, the orchestration of immune-suppressive mechanisms.Our particular focus herein centers on the phenomenon of immune suppression and its protective utility in both of these contexts. In the context of pregnancy, immune suppression assumes a paramount role in shielding the semi-allogeneic fetus from the potentially hostile immune responses of the maternal host. In stark contrast, in the milieu of cancer, this very same immunological suppression fosters the transformation of the tumor microenvironment into a sanctuary personalized for the neoplastic cells.Thus, the striking parallels between the immunosuppressive strategies deployed during pregnancy and those co-opted by malignancies offer a tantalizing reservoir of insights. These insights promise to inform novel avenues in the realm of cancer immunotherapy. By harnessing our understanding of the immunological events that detrimentally impact fetal development, a knowledge grounded in the context of conditions such as preeclampsia or miscarriage, we may uncover innovative immunotherapeutic strategies to combat cancer.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"793-807"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140140187","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Porphyromonas gingivalis promotes the progression of oral squamous cell carcinoma by stimulating the release of neutrophil extracellular traps in the tumor immune microenvironment. 牙龈卟啉单胞菌通过刺激肿瘤免疫微环境中中性粒细胞胞外捕获物的释放,促进口腔鳞状细胞癌的进展。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2023-12-27 DOI: 10.1007/s00011-023-01822-z
Zhi-Chen Guo, Si-Li Jing, Xin-Yu Jia, Sadam Ahmed Elayah, Lin-Yang Xie, Hao Cui, Jun-Bo Tu, Si-Jia Na

Background: The aim of this study was to investigate the impact of Porphyromonas gingivalis (P. gingivalis) on the progression of oral squamous cell carcinoma (OSCC) through neutrophil extracellular traps (NETs) in the tumor immune microenvironment.

Methods: The expression of NETs-related markers was identified through immunohistochemistry, immunofluorescence, and Western blotting in different clinical stages of OSCC samples. The relationship between NETs-related markers and clinicopathological characteristics in 180 samples was analyzed using immunohistochemistry data. Furthermore, the ability to predict the prognosis of OSCC patients was determined by ROC curve analysis and survival analysis. The effect of P. gingivalis on the release of NETs was identified through immunofluorescence and immunohistochemistry, both in vitro and in vivo. CAL27 and SCC25 cell lines were subjected to NETs stimulation to elucidate the influence of NETs on various cellular processes, including cell proliferation, migration, invasion, and metastasis in vitro. Furthermore, the impact of NETs on the growth and metastatic potential of OSCC was assessed using in vivo models involving tumor-bearing mice and tumor metastasis mouse models.

Results: Immunochemistry analysis revealed a significant correlation between the NETs-related markers and clinical stage, living status as well as TN stage. P. gingivalis has demonstrated its ability to effectively induce the release of NETs both in vivo and in vitro. NETs have the potential to facilitate cell migration, invasion, and colony formation. Moreover, in vivo experiments have demonstrated that NETs play a pivotal role in promoting tumor metastasis.

Conclusion: High expression of NETs-related markers demonstrates a strong correlation with the progression of OSCC. Inhibition of the NETs release process stimulated by P. gingivalis and targeted NETs could potentially open up a novel avenue in the field of immunotherapy for patients afflicted with OSCC.

背景:本研究旨在探讨牙龈卟啉单胞菌(P. gingivalis)通过肿瘤免疫微环境中的中性粒细胞胞外陷阱(NETs)对口腔鳞状细胞癌(OSCC)进展的影响:方法:通过免疫组化、免疫荧光和 Western 印迹法鉴定不同临床分期 OSCC 样本中与 NETs 相关的标记物的表达。利用免疫组化数据分析了180份样本中NETs相关标记物与临床病理特征之间的关系。此外,还通过 ROC 曲线分析和生存分析确定了预测 OSCC 患者预后的能力。通过体外和体内免疫荧光和免疫组化鉴定了牙龈脓杆菌对 NETs 释放的影响。对 CAL27 和 SCC25 细胞系进行了 NETs 刺激,以阐明 NETs 对体外细胞增殖、迁移、侵袭和转移等各种细胞过程的影响。此外,还利用肿瘤小鼠体内模型和肿瘤转移小鼠模型评估了NETs对OSCC生长和转移潜力的影响:免疫化学分析表明,NETs相关标记物与临床分期、生存状态和TN分期之间存在显著相关性。牙龈脓疱病已证明它能在体内和体外有效诱导 NETs 的释放。NETs 具有促进细胞迁移、入侵和集落形成的潜力。此外,体内实验证明,NETs 在促进肿瘤转移方面发挥着关键作用:结论:NET 相关标记物的高表达与 OSCC 的进展密切相关。抑制牙龈脓胞刺激的 NETs 释放过程和靶向 NETs 有可能为 OSCC 患者的免疫疗法开辟一条新途径。
{"title":"Porphyromonas gingivalis promotes the progression of oral squamous cell carcinoma by stimulating the release of neutrophil extracellular traps in the tumor immune microenvironment.","authors":"Zhi-Chen Guo, Si-Li Jing, Xin-Yu Jia, Sadam Ahmed Elayah, Lin-Yang Xie, Hao Cui, Jun-Bo Tu, Si-Jia Na","doi":"10.1007/s00011-023-01822-z","DOIUrl":"10.1007/s00011-023-01822-z","url":null,"abstract":"<p><strong>Background: </strong>The aim of this study was to investigate the impact of Porphyromonas gingivalis (P. gingivalis) on the progression of oral squamous cell carcinoma (OSCC) through neutrophil extracellular traps (NETs) in the tumor immune microenvironment.</p><p><strong>Methods: </strong>The expression of NETs-related markers was identified through immunohistochemistry, immunofluorescence, and Western blotting in different clinical stages of OSCC samples. The relationship between NETs-related markers and clinicopathological characteristics in 180 samples was analyzed using immunohistochemistry data. Furthermore, the ability to predict the prognosis of OSCC patients was determined by ROC curve analysis and survival analysis. The effect of P. gingivalis on the release of NETs was identified through immunofluorescence and immunohistochemistry, both in vitro and in vivo. CAL27 and SCC25 cell lines were subjected to NETs stimulation to elucidate the influence of NETs on various cellular processes, including cell proliferation, migration, invasion, and metastasis in vitro. Furthermore, the impact of NETs on the growth and metastatic potential of OSCC was assessed using in vivo models involving tumor-bearing mice and tumor metastasis mouse models.</p><p><strong>Results: </strong>Immunochemistry analysis revealed a significant correlation between the NETs-related markers and clinical stage, living status as well as TN stage. P. gingivalis has demonstrated its ability to effectively induce the release of NETs both in vivo and in vitro. NETs have the potential to facilitate cell migration, invasion, and colony formation. Moreover, in vivo experiments have demonstrated that NETs play a pivotal role in promoting tumor metastasis.</p><p><strong>Conclusion: </strong>High expression of NETs-related markers demonstrates a strong correlation with the progression of OSCC. Inhibition of the NETs release process stimulated by P. gingivalis and targeted NETs could potentially open up a novel avenue in the field of immunotherapy for patients afflicted with OSCC.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"693-705"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"139039915","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Long-chain acyl-CoA synthetase 4-mediated mitochondrial fatty acid metabolism and dendritic cell antigen presentation. 长链酰基-CoA 合成酶 4 介导的线粒体脂肪酸代谢和树突状细胞抗原递呈
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-03-12 DOI: 10.1007/s00011-024-01868-7
Yan Li, Wenlong Fu, JinYing Xiang, Yinying Ren, Yuehan Li, Mi Zhou, Jinyue Yu, Zhengxiu Luo, Enmei Liu, Zhou Fu, Bo Liu, Fengxia Ding

Objective: This study aims to investigate the role of Acyl-CoA synthetase 4 (ACSL4) in mediating mitochondrial fatty acid metabolism and dendritic cell (DC) antigen presentation in the immune response associated with asthma.

Methods: RNA sequencing was employed to identify key genes associated with mitochondrial function and fatty acid metabolism in DCs. ELISA was employed to assess the levels of fatty acid metabolism in DCs. Mitochondrial morphology was evaluated using laser confocal microscopy, structured illumination microscopy, and transmission electron microscopy. Flow cytometry and immunofluorescence were utilized to detect changes in mitochondrial superoxide generation in DCs, followed by immunofluorescence co-localization analysis of ACSL4 and the mitochondrial marker protein COXIV. Subsequently, pathological changes and immune responses in mouse lung tissue were observed. ELISA was conducted to measure the levels of fatty acid metabolism in lung tissue DCs. qRT-PCR and western blotting were employed to respectively assess the expression levels of mitochondrial-associated genes (ATP5F1A, VDAC1, COXIV, TFAM, iNOS) and proteins (ATP5F1A, VDAC1, COXIV, TOMM20, iNOS) in lung tissue DCs. Flow cytometry was utilized to analyze changes in the expression of surface antigens presented by DCs in lung tissue, specifically the MHCII molecule and the co-stimulatory molecules CD80/86.

Results: The sequencing results reveal that ACSL4 is a crucial gene regulating mitochondrial function and fatty acid metabolism in DCs. Inhibiting ACSL4 reduces the levels of fatty acid oxidases in DCs, increases arachidonic acid levels, and decreases A-CoA synthesis. Simultaneously, ACSL4 inhibition leads to an increase in mitochondrial superoxide production (MitoSOX) in DCs, causing mitochondrial rupture, vacuolization, and sparse mitochondrial cristae. In mice, ACSL4 inhibition exacerbates pulmonary pathological changes and immune responses, reducing the fatty acid metabolism levels within lung tissue DCs and the expression of mitochondria-associated genes and proteins. This inhibition induces an increase in the expression of MHCII antigen presentation molecules and co-stimulatory molecules CD80/86 in DCs.

Conclusions: The research findings indicate that ACSL4-mediated mitochondrial fatty acid metabolism and dendritic cell antigen presentation play a crucial regulatory role in the immune response of asthma. This discovery holds promise for enhancing our understanding of the mechanisms underlying asthma pathogenesis and potentially identifying novel targets for its prevention and treatment.

研究目的本研究旨在探讨 Acyl-CoA synthetase 4(ACSL4)在哮喘相关免疫反应中介导线粒体脂肪酸代谢和树突状细胞(DC)抗原呈递的作用:方法:采用 RNA 测序鉴定与线粒体功能和 DC 脂肪酸代谢相关的关键基因。采用 ELISA 方法评估 DCs 中的脂肪酸代谢水平。使用激光共聚焦显微镜、结构照明显微镜和透射电子显微镜评估线粒体形态。利用流式细胞术和免疫荧光检测 DC 线粒体超氧化物生成的变化,然后对 ACSL4 和线粒体标记蛋白 COXIV 进行免疫荧光共定位分析。随后观察了小鼠肺组织的病理变化和免疫反应。采用 qRT-PCR 和 Western 印迹技术分别评估肺组织 DC 中线粒体相关基因(ATP5F1A、VDAC1、COXIV、TFAM、iNOS)和蛋白(ATP5F1A、VDAC1、COXIV、TOMM20、iNOS)的表达水平。利用流式细胞术分析了肺组织中直流细胞表面抗原的表达变化,特别是 MHCII 分子和共刺激分子 CD80/86:测序结果显示,ACSL4是调节DCs线粒体功能和脂肪酸代谢的关键基因。抑制 ACSL4 会降低 DCs 中脂肪酸氧化酶的水平,增加花生四烯酸的含量,减少 A-CoA 的合成。同时,抑制 ACSL4 会导致 DC 中线粒体超氧化物生成(MitoSOX)增加,造成线粒体破裂、空泡化和线粒体嵴稀疏。在小鼠体内,抑制 ACSL4 会加剧肺部病理变化和免疫反应,降低肺组织 DC 内的脂肪酸代谢水平以及线粒体相关基因和蛋白质的表达。这种抑制可诱导直流细胞中MHCII抗原递呈分子和共刺激分子CD80/86的表达增加:研究结果表明,ACSL4 介导的线粒体脂肪酸代谢和树突状细胞抗原呈递在哮喘的免疫反应中发挥着重要的调节作用。这一发现有望加深我们对哮喘发病机制的了解,并有可能确定预防和治疗哮喘的新靶点。
{"title":"Long-chain acyl-CoA synthetase 4-mediated mitochondrial fatty acid metabolism and dendritic cell antigen presentation.","authors":"Yan Li, Wenlong Fu, JinYing Xiang, Yinying Ren, Yuehan Li, Mi Zhou, Jinyue Yu, Zhengxiu Luo, Enmei Liu, Zhou Fu, Bo Liu, Fengxia Ding","doi":"10.1007/s00011-024-01868-7","DOIUrl":"10.1007/s00011-024-01868-7","url":null,"abstract":"<p><strong>Objective: </strong>This study aims to investigate the role of Acyl-CoA synthetase 4 (ACSL4) in mediating mitochondrial fatty acid metabolism and dendritic cell (DC) antigen presentation in the immune response associated with asthma.</p><p><strong>Methods: </strong>RNA sequencing was employed to identify key genes associated with mitochondrial function and fatty acid metabolism in DCs. ELISA was employed to assess the levels of fatty acid metabolism in DCs. Mitochondrial morphology was evaluated using laser confocal microscopy, structured illumination microscopy, and transmission electron microscopy. Flow cytometry and immunofluorescence were utilized to detect changes in mitochondrial superoxide generation in DCs, followed by immunofluorescence co-localization analysis of ACSL4 and the mitochondrial marker protein COXIV. Subsequently, pathological changes and immune responses in mouse lung tissue were observed. ELISA was conducted to measure the levels of fatty acid metabolism in lung tissue DCs. qRT-PCR and western blotting were employed to respectively assess the expression levels of mitochondrial-associated genes (ATP5F1A, VDAC1, COXIV, TFAM, iNOS) and proteins (ATP5F1A, VDAC1, COXIV, TOMM20, iNOS) in lung tissue DCs. Flow cytometry was utilized to analyze changes in the expression of surface antigens presented by DCs in lung tissue, specifically the MHCII molecule and the co-stimulatory molecules CD80/86.</p><p><strong>Results: </strong>The sequencing results reveal that ACSL4 is a crucial gene regulating mitochondrial function and fatty acid metabolism in DCs. Inhibiting ACSL4 reduces the levels of fatty acid oxidases in DCs, increases arachidonic acid levels, and decreases A-CoA synthesis. Simultaneously, ACSL4 inhibition leads to an increase in mitochondrial superoxide production (MitoSOX) in DCs, causing mitochondrial rupture, vacuolization, and sparse mitochondrial cristae. In mice, ACSL4 inhibition exacerbates pulmonary pathological changes and immune responses, reducing the fatty acid metabolism levels within lung tissue DCs and the expression of mitochondria-associated genes and proteins. This inhibition induces an increase in the expression of MHCII antigen presentation molecules and co-stimulatory molecules CD80/86 in DCs.</p><p><strong>Conclusions: </strong>The research findings indicate that ACSL4-mediated mitochondrial fatty acid metabolism and dendritic cell antigen presentation play a crucial regulatory role in the immune response of asthma. This discovery holds promise for enhancing our understanding of the mechanisms underlying asthma pathogenesis and potentially identifying novel targets for its prevention and treatment.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"819-839"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140109972","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
γδ T cells in oral diseases. 口腔疾病中的γδ T 细胞。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-04-02 DOI: 10.1007/s00011-024-01870-z
Xin-Yi Wei, Ya-Qin Tan, Gang Zhou

Objective: γδ T cells are a distinct subset of unconventional T cells, which link innate and adaptive immunity by secreting cytokines and interacting with other immune cells, thereby modulating immune responses. As the first line of host defense, γδ T cells are essential for mucosal homeostasis and immune surveillance. When abnormally activated or impaired, γδ T cells can contribute to pathogenic processes. Accumulating evidence has revealed substantial impacts of γδ T cells on the pathogenesis of cancers, infections, and immune-inflammatory diseases. γδ T cells exhibit dual roles in cancers, promoting or inhibiting tumor growth, depending on their phenotypes and the clinical stage of cancers. During infections, γδ T cells exert high cytotoxic activity in infectious diseases, which is essential for combating bacterial and viral infections by recognizing foreign antigens and activating other immune cells. γδ T cells are also implicated in the onset and progression of immune-inflammatory diseases. However, the specific involvement and underlying mechanisms of γδ T cells in oral diseases have not been systematically discussed.

Methods: We conducted a systematic literature review using the PubMed/MEDLINE databases to identify and analyze relevant literature on the roles of γδ T cells in oral diseases.

Results: The literature review revealed that γδ T cells play a pivotal role in maintaining oral mucosal homeostasis and are involved in the pathogenesis of oral cancers, periodontal diseases, graft-versus-host disease (GVHD), oral lichen planus (OLP), and oral candidiasis. γδ T cells mainly influence various pathophysiological processes, such as anti-tumor activity, eradication of infection, and immune response regulation.

Conclusion: This review focuses on the involvement of γδ T cells in oral diseases, with a particular emphasis on the main functions and underlying mechanisms by which γδ T cells influence the pathogenesis and progression of these conditions. This review underscores the potential of γδ T cells as therapeutic targets in managing oral health issues.

目的:γδ T 细胞是非常规 T 细胞的一个独特亚群,它通过分泌细胞因子和与其他免疫细胞相互作用,将先天性免疫和适应性免疫联系起来,从而调节免疫反应。作为宿主防御的第一道防线,γδ T 细胞对粘膜平衡和免疫监视至关重要。当γδ T 细胞被异常激活或受损时,可导致致病过程。越来越多的证据表明,γδ T 细胞对癌症、感染和免疫炎症性疾病的发病机制有重大影响。γδT细胞在癌症中表现出双重作用,促进或抑制肿瘤生长,这取决于它们的表型和癌症的临床阶段。在感染性疾病中,γδ T 细胞具有很强的细胞毒活性,通过识别外来抗原和激活其他免疫细胞,对抗击细菌和病毒感染至关重要。γδT细胞还与免疫炎症性疾病的发生和发展有关。然而,γδ T 细胞在口腔疾病中的具体参与情况和潜在机制尚未得到系统讨论:我们利用 PubMed/MEDLINE 数据库进行了系统的文献综述,以确定和分析有关γδ T 细胞在口腔疾病中作用的相关文献:文献综述显示,γδ T 细胞在维持口腔黏膜稳态方面发挥着关键作用,并参与了口腔癌、牙周病、移植物抗宿主病(GVHD)、口腔扁平苔藓(OLP)和口腔念珠菌病的发病机制。γδT细胞主要影响各种病理生理过程,如抗肿瘤活性、根除感染和免疫反应调节:本综述重点探讨了γδ T 细胞参与口腔疾病的情况,特别强调了γδ T 细胞影响这些疾病发病和进展的主要功能和潜在机制。这篇综述强调了 γδ T 细胞作为治疗靶点在管理口腔健康问题方面的潜力。
{"title":"γδ T cells in oral diseases.","authors":"Xin-Yi Wei, Ya-Qin Tan, Gang Zhou","doi":"10.1007/s00011-024-01870-z","DOIUrl":"10.1007/s00011-024-01870-z","url":null,"abstract":"<p><strong>Objective: </strong>γδ T cells are a distinct subset of unconventional T cells, which link innate and adaptive immunity by secreting cytokines and interacting with other immune cells, thereby modulating immune responses. As the first line of host defense, γδ T cells are essential for mucosal homeostasis and immune surveillance. When abnormally activated or impaired, γδ T cells can contribute to pathogenic processes. Accumulating evidence has revealed substantial impacts of γδ T cells on the pathogenesis of cancers, infections, and immune-inflammatory diseases. γδ T cells exhibit dual roles in cancers, promoting or inhibiting tumor growth, depending on their phenotypes and the clinical stage of cancers. During infections, γδ T cells exert high cytotoxic activity in infectious diseases, which is essential for combating bacterial and viral infections by recognizing foreign antigens and activating other immune cells. γδ T cells are also implicated in the onset and progression of immune-inflammatory diseases. However, the specific involvement and underlying mechanisms of γδ T cells in oral diseases have not been systematically discussed.</p><p><strong>Methods: </strong>We conducted a systematic literature review using the PubMed/MEDLINE databases to identify and analyze relevant literature on the roles of γδ T cells in oral diseases.</p><p><strong>Results: </strong>The literature review revealed that γδ T cells play a pivotal role in maintaining oral mucosal homeostasis and are involved in the pathogenesis of oral cancers, periodontal diseases, graft-versus-host disease (GVHD), oral lichen planus (OLP), and oral candidiasis. γδ T cells mainly influence various pathophysiological processes, such as anti-tumor activity, eradication of infection, and immune response regulation.</p><p><strong>Conclusion: </strong>This review focuses on the involvement of γδ T cells in oral diseases, with a particular emphasis on the main functions and underlying mechanisms by which γδ T cells influence the pathogenesis and progression of these conditions. This review underscores the potential of γδ T cells as therapeutic targets in managing oral health issues.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"867-876"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140335542","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Immunopathogenesis of urticaria: a clinical perspective on histamine and cytokine involvement. 荨麻疹的免疫发病机制:组胺和细胞因子参与的临床视角。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-03-31 DOI: 10.1007/s00011-024-01869-6
Rudranil Bhowmik, Md Adil Shaharyar, Arnab Sarkar, Avishek Mandal, Kumar Anand, Humira Shabana, Achintya Mitra, Sanmoy Karmakar

Background: Urticaria is a clinical condition characterized by the appearance of wheals (hives), angioedema, or both. Over the last several decades, a better understanding of the mechanisms at play in the immunopathogenesis of urticaria has underscored the existence of numerous urticaria subtypes. Separating the different kinds of urticaria explicitly helps find the best detection method for the management of this skin disorder. Subtypes of urticaria also include both spontaneous and physical types. The conventional ones include spontaneous urticaria, constituting both acute and chronic urticaria. Therefore, a broad and effective therapy is essential for the diagnosis and treatment of urticaria.

Methods: To understand the immunopathogenesis of urticaria, various databases, including PubMed, Scopus, and Web of Science, were used to retrieve original articles and reviews related to urticaria. While information on several clinical trials were obtained from clinicaltrials.gov database.

Results: This article highlights the immunopathogenesis involved in the intricate interaction between cellular infiltration, immune reactions, coagulation cascades, and autoantibodies that underlie urticaria's pathophysiology.

Conclusion: The recent progress in understanding urticaria can help to understand the intricate characteristics in the immunopathogenesis of urticaria and could play a beneficial role in the management of urticaria.

背景:荨麻疹是一种临床症状,其特征是出现喘息(荨麻疹)、血管性水肿或两者兼而有之。过去几十年来,随着对荨麻疹免疫发病机制的深入了解,人们发现荨麻疹存在多种亚型。明确区分不同类型的荨麻疹有助于找到治疗这种皮肤病的最佳检测方法。荨麻疹的亚型还包括自发性和物理性两种类型。传统的荨麻疹包括自发性荨麻疹、急性荨麻疹和慢性荨麻疹。因此,广泛而有效的治疗对于荨麻疹的诊断和治疗至关重要:为了了解荨麻疹的免疫发病机制,我们使用了各种数据库,包括 PubMed、Scopus 和 Web of Science,检索与荨麻疹相关的原创文章和综述。此外,还从 clinicaltrials.gov 数据库中获取了几项临床试验的信息:本文重点介绍了荨麻疹病理生理学中细胞浸润、免疫反应、凝血级联和自身抗体之间错综复杂的相互作用所涉及的免疫发病机制:结论:近年来在了解荨麻疹方面取得的进展有助于理解荨麻疹免疫发病机制中错综复杂的特点,并可在荨麻疹的治疗中发挥有益作用。
{"title":"Immunopathogenesis of urticaria: a clinical perspective on histamine and cytokine involvement.","authors":"Rudranil Bhowmik, Md Adil Shaharyar, Arnab Sarkar, Avishek Mandal, Kumar Anand, Humira Shabana, Achintya Mitra, Sanmoy Karmakar","doi":"10.1007/s00011-024-01869-6","DOIUrl":"10.1007/s00011-024-01869-6","url":null,"abstract":"<p><strong>Background: </strong>Urticaria is a clinical condition characterized by the appearance of wheals (hives), angioedema, or both. Over the last several decades, a better understanding of the mechanisms at play in the immunopathogenesis of urticaria has underscored the existence of numerous urticaria subtypes. Separating the different kinds of urticaria explicitly helps find the best detection method for the management of this skin disorder. Subtypes of urticaria also include both spontaneous and physical types. The conventional ones include spontaneous urticaria, constituting both acute and chronic urticaria. Therefore, a broad and effective therapy is essential for the diagnosis and treatment of urticaria.</p><p><strong>Methods: </strong>To understand the immunopathogenesis of urticaria, various databases, including PubMed, Scopus, and Web of Science, were used to retrieve original articles and reviews related to urticaria. While information on several clinical trials were obtained from clinicaltrials.gov database.</p><p><strong>Results: </strong>This article highlights the immunopathogenesis involved in the intricate interaction between cellular infiltration, immune reactions, coagulation cascades, and autoantibodies that underlie urticaria's pathophysiology.</p><p><strong>Conclusion: </strong>The recent progress in understanding urticaria can help to understand the intricate characteristics in the immunopathogenesis of urticaria and could play a beneficial role in the management of urticaria.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"877-896"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140329800","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Recognition of Mycobacterium tuberculosis by macrophage Toll-like receptor and its role in autophagy. 巨噬细胞 Toll 样受体对结核分枝杆菌的识别及其在自噬中的作用
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-04-02 DOI: 10.1007/s00011-024-01864-x
Linna Wei, Liping Liu, Zudi Meng, Kai Qi, Xuehan Gao, Jihong Feng, Junmin Luo

Background: The pathogen responsible for tuberculosis is called Mycobacterium tuberculosis. Its interaction with macrophages has a significant impact on the onset and progression of the disease.

Methods: The respiratory pathway allows Mycobacterium tuberculosis to enter the body's lungs where it battles immune cells before being infected latently or actively. In the progress of tuberculosis, Mycobacterium tuberculosis activates the body's immune system and creates inflammatory factors, which cause tissue inflammation to infiltrate and the creation of granulomas, which seriously harms the body. Toll-like receptors of macrophage can mediate host recognition of Mycobacterium tuberculosis, initiate immune responses, and participate in macrophage autophagy. New host-directed therapeutic approaches targeting autophagy for drug-resistant Mycobacterium tuberculosis have emerged, providing new ideas for the effective treatment of tuberculosis.

Conclusions: In-depth understanding of the mechanisms by which macrophage autophagy interacts with intracellular Mycobacterium tuberculosis, as well as the study of potent and specific autophagy-regulating molecules, will lead to much-needed advances in drug discovery and vaccine design, which will improve the prevention and treatment of human tuberculosis.

背景:结核病的病原体是结核分枝杆菌。它与巨噬细胞的相互作用对疾病的发生和发展有重要影响:方法:结核分枝杆菌通过呼吸途径进入人体肺部,在肺部与免疫细胞对抗,然后潜伏或主动感染。在结核病的发展过程中,结核分枝杆菌会激活人体的免疫系统,产生炎症因子,引起组织炎症浸润,形成肉芽肿,严重危害人体。巨噬细胞的 Toll 样受体能介导宿主识别结核分枝杆菌,启动免疫反应,并参与巨噬细胞的自噬。针对耐药结核分枝杆菌的宿主定向治疗新方法已经出现,为结核病的有效治疗提供了新思路:深入了解巨噬细胞自噬与细胞内结核分枝杆菌相互作用的机制,以及对强效和特异性自噬调节分子的研究,将为药物研发和疫苗设计带来急需的进展,从而改善人类结核病的预防和治疗。
{"title":"Recognition of Mycobacterium tuberculosis by macrophage Toll-like receptor and its role in autophagy.","authors":"Linna Wei, Liping Liu, Zudi Meng, Kai Qi, Xuehan Gao, Jihong Feng, Junmin Luo","doi":"10.1007/s00011-024-01864-x","DOIUrl":"10.1007/s00011-024-01864-x","url":null,"abstract":"<p><strong>Background: </strong>The pathogen responsible for tuberculosis is called Mycobacterium tuberculosis. Its interaction with macrophages has a significant impact on the onset and progression of the disease.</p><p><strong>Methods: </strong>The respiratory pathway allows Mycobacterium tuberculosis to enter the body's lungs where it battles immune cells before being infected latently or actively. In the progress of tuberculosis, Mycobacterium tuberculosis activates the body's immune system and creates inflammatory factors, which cause tissue inflammation to infiltrate and the creation of granulomas, which seriously harms the body. Toll-like receptors of macrophage can mediate host recognition of Mycobacterium tuberculosis, initiate immune responses, and participate in macrophage autophagy. New host-directed therapeutic approaches targeting autophagy for drug-resistant Mycobacterium tuberculosis have emerged, providing new ideas for the effective treatment of tuberculosis.</p><p><strong>Conclusions: </strong>In-depth understanding of the mechanisms by which macrophage autophagy interacts with intracellular Mycobacterium tuberculosis, as well as the study of potent and specific autophagy-regulating molecules, will lead to much-needed advances in drug discovery and vaccine design, which will improve the prevention and treatment of human tuberculosis.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"753-770"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140335530","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Identification of a novel ADCC-related gene signature for predicting the prognosis and therapy response in lung adenocarcinoma. 鉴定用于预测肺腺癌预后和治疗反应的新型 ADCC 相关基因特征。
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-05-01 Epub Date: 2024-03-20 DOI: 10.1007/s00011-024-01871-y
Liangyu Zhang, Xun Zhang, Maohao Guan, Jianshen Zeng, Fengqiang Yu, Fancai Lai

Background: Previous studies have largely neglected the role of ADCC in LUAD, and no study has systematically compiled ADCC-associated genes to create prognostic signatures.

Methods: In this study, 1564 LUAD patients, 2057 NSCLC patients, and more than 5000 patients with various cancer types from diverse cohorts were included. R package ConsensusClusterPlus was utilized to classify patients into different subtypes. A number of machine-learning algorithms were used to construct the ADCCRS. GSVA and ClusterProfiler were used for enrichment analyses, and IOBR was used to quantify immune cell infiltration level. GISTIC2.0 and maftools were used to analyze the CNV and SNV data. The Oncopredict package was used to predict drug information based on the GDSC1. Three immunotherapy cohorts were used to evaluate patient response to immunotherapy. The Seurat package was used to process single-cell data, the AUCell package was used to calculate cells' geneset activity scores, and the Scissor algorithm was used to identify ADCCRS-associated cells.

Results: Through unsupervised clustering, two distinct subtypes of LUAD were identified, each exhibiting distinct clinical characteristics. The ADCCRS, consisted of 16 genes, was constructed by integrated machine-learning methods. The prognostic power of ADCCRS was validated in 28 independent datasets. Further, ADCCRS shows better predictive abilities than 102 previously published signatures in predicting LUAD patients' survival. A nomogram incorporating ADCCRS and clinical features was constructed, demonstrating high predictive performance. ADCCRS positively correlates with patients' gene mutation, and integrated analysis of bulk and single-cell transcriptome data revealed the association of ADCCRS with TME modulators. Cells representing high-ADCCRS phenotype exhibited more malignant features. LUAD patients with high ADCCRS levels exhibited sensitivity to chemotherapy and targeted therapy, while displaying resistance to immunotherapy. In pan-cancer analysis, ADCCRS still exhibited significant prognostic value and was found to be a risk factor for most cancer patients.

Conclusions: ADCCRS offers a critical prognostic insight for patients with LUAD, shedding light on the tumor microenvironment and forecasting treatment responsiveness.

背景:以往的研究在很大程度上忽视了ADCC在LUAD中的作用:以往的研究在很大程度上忽视了ADCC在LUAD中的作用,也没有研究系统地整理ADCC相关基因以创建预后特征:本研究纳入了 1564 例 LUAD 患者、2057 例 NSCLC 患者以及来自不同队列的 5000 多例不同癌症类型的患者。利用R软件包ConsensusClusterPlus将患者分为不同的亚型。一些机器学习算法被用于构建 ADCCRS。GSVA和ClusterProfiler用于富集分析,IOBR用于量化免疫细胞浸润水平。GISTIC2.0 和 maftools 用于分析 CNV 和 SNV 数据。Oncopredict 软件包用于根据 GDSC1 预测药物信息。三个免疫疗法队列用于评估患者对免疫疗法的反应。Seurat软件包用于处理单细胞数据,AUCell软件包用于计算细胞的基因组活性得分,Scissor算法用于识别ADCCRS相关细胞:结果:通过无监督聚类,确定了LUAD的两种不同亚型,每种亚型都表现出不同的临床特征。综合机器学习方法构建了由16个基因组成的ADCCRS。在 28 个独立数据集中验证了 ADCCRS 的预后能力。此外,ADCCRS在预测LUAD患者生存率方面的预测能力优于之前发表的102个特征。结合 ADCCRS 和临床特征构建的提名图显示了很高的预测能力。ADCCRS与患者的基因突变呈正相关,对大体和单细胞转录组数据的综合分析表明了ADCCRS与TME调节因子的关联。代表高ADCCRS表型的细胞表现出更多恶性特征。ADCCRS水平高的LUAD患者对化疗和靶向治疗敏感,而对免疫疗法有抵抗力。在泛癌症分析中,ADCCRS仍具有重要的预后价值,是大多数癌症患者的风险因素:ADCCRS为LUAD患者的预后提供了重要依据,揭示了肿瘤微环境并预测了治疗反应性。
{"title":"Identification of a novel ADCC-related gene signature for predicting the prognosis and therapy response in lung adenocarcinoma.","authors":"Liangyu Zhang, Xun Zhang, Maohao Guan, Jianshen Zeng, Fengqiang Yu, Fancai Lai","doi":"10.1007/s00011-024-01871-y","DOIUrl":"10.1007/s00011-024-01871-y","url":null,"abstract":"<p><strong>Background: </strong>Previous studies have largely neglected the role of ADCC in LUAD, and no study has systematically compiled ADCC-associated genes to create prognostic signatures.</p><p><strong>Methods: </strong>In this study, 1564 LUAD patients, 2057 NSCLC patients, and more than 5000 patients with various cancer types from diverse cohorts were included. R package ConsensusClusterPlus was utilized to classify patients into different subtypes. A number of machine-learning algorithms were used to construct the ADCCRS. GSVA and ClusterProfiler were used for enrichment analyses, and IOBR was used to quantify immune cell infiltration level. GISTIC2.0 and maftools were used to analyze the CNV and SNV data. The Oncopredict package was used to predict drug information based on the GDSC1. Three immunotherapy cohorts were used to evaluate patient response to immunotherapy. The Seurat package was used to process single-cell data, the AUCell package was used to calculate cells' geneset activity scores, and the Scissor algorithm was used to identify ADCCRS-associated cells.</p><p><strong>Results: </strong>Through unsupervised clustering, two distinct subtypes of LUAD were identified, each exhibiting distinct clinical characteristics. The ADCCRS, consisted of 16 genes, was constructed by integrated machine-learning methods. The prognostic power of ADCCRS was validated in 28 independent datasets. Further, ADCCRS shows better predictive abilities than 102 previously published signatures in predicting LUAD patients' survival. A nomogram incorporating ADCCRS and clinical features was constructed, demonstrating high predictive performance. ADCCRS positively correlates with patients' gene mutation, and integrated analysis of bulk and single-cell transcriptome data revealed the association of ADCCRS with TME modulators. Cells representing high-ADCCRS phenotype exhibited more malignant features. LUAD patients with high ADCCRS levels exhibited sensitivity to chemotherapy and targeted therapy, while displaying resistance to immunotherapy. In pan-cancer analysis, ADCCRS still exhibited significant prognostic value and was found to be a risk factor for most cancer patients.</p><p><strong>Conclusions: </strong>ADCCRS offers a critical prognostic insight for patients with LUAD, shedding light on the tumor microenvironment and forecasting treatment responsiveness.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":" ","pages":"841-866"},"PeriodicalIF":6.7,"publicationDate":"2024-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140174527","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
A signaling network map of Lipoxin (LXA4): an anti-inflammatory molecule 抗炎分子脂质毒素(LXA4)的信号网络图
IF 6.7 3区 医学 Q2 CELL BIOLOGY Pub Date : 2024-04-26 DOI: 10.1007/s00011-024-01885-6
G. P. Suchitha, Rex Devasahayam Arokia Balaya, T. S. Keshava Prasad, Shobha Dagamajalu

Lipoxins (LXs) are a class of endogenous bioactive lipid mediators that are involved in the regulation of inflammation. They exert immunomodulatory effects by regulating the behaviour of various immune cells, including neutrophils, macrophages, and T and B cells, by promoting the clearance of apoptotic neutrophils. This helps to dampen inflammation and promote tissue repair. LXs regulate the expression of many inflammatory genes by modulating the levels of transcription factors, such as nuclear factor κB (NF-κB), activator protein-1 (AP-1), nerve growth factor-regulated factor 1A binding protein 1 (NGF), and peroxisome proliferator activated receptor γ (PPAR-γ), which are elevated in various diseases, such as respiratory tract diseases, renal diseases, cancer, neurodegenerative diseases, and viral infections. Lipoxin-mediated signaling is involved in chronic inflammation, cancer, diabetes-associated kidney disease, lung injury, liver injury, endometriosis, respiratory tract diseases, neurodegenerative diseases, chronic cerebral hypoperfusion, and retinal degeneration. In this study, we systematically investigated the intricate network of lipoxin signaling by analyzing the relevant literature. The resulting map comprised 467 molecules categorized as activation/inhibition, enzyme catalysis, gene and protein expression, molecular associations, and translocation events. This map serves as a valuable resource for understanding the complexity of lipoxin signaling and its impact on various cellular functions.

脂质毒素(LXs)是一类参与炎症调节的内源性生物活性脂质介质。它们通过促进凋亡中性粒细胞的清除,调节包括中性粒细胞、巨噬细胞、T 细胞和 B 细胞在内的各种免疫细胞的行为,从而发挥免疫调节作用。这有助于抑制炎症,促进组织修复。脂质毒素通过调节核因子κB(NF-κB)、激活蛋白-1(AP-1)、神经生长因子调节因子 1A 结合蛋白 1(NGF)和过氧化物酶体增殖激活受体γ(PPAR-γ)等转录因子的水平来调节许多炎症基因的表达,这些转录因子在呼吸道疾病、肾脏疾病、癌症、神经退行性疾病和病毒感染等各种疾病中都会升高。脂质毒素介导的信号转导参与了慢性炎症、癌症、糖尿病相关性肾病、肺损伤、肝损伤、子宫内膜异位症、呼吸道疾病、神经退行性疾病、慢性脑灌注不足和视网膜变性。在这项研究中,我们通过分析相关文献,系统地研究了脂质毒素信号转导的复杂网络。所绘制的图谱包括 467 个分子,分为激活/抑制、酶催化、基因和蛋白质表达、分子关联和转位事件等类别。该图谱是了解脂质毒素信号转导的复杂性及其对各种细胞功能影响的宝贵资源。
{"title":"A signaling network map of Lipoxin (LXA4): an anti-inflammatory molecule","authors":"G. P. Suchitha, Rex Devasahayam Arokia Balaya, T. S. Keshava Prasad, Shobha Dagamajalu","doi":"10.1007/s00011-024-01885-6","DOIUrl":"https://doi.org/10.1007/s00011-024-01885-6","url":null,"abstract":"<p>Lipoxins (LXs) are a class of endogenous bioactive lipid mediators that are involved in the regulation of inflammation. They exert immunomodulatory effects by regulating the behaviour of various immune cells, including neutrophils, macrophages, and T and B cells, by promoting the clearance of apoptotic neutrophils. This helps to dampen inflammation and promote tissue repair. LXs regulate the expression of many inflammatory genes by modulating the levels of transcription factors, such as nuclear factor κB (NF-κB), activator protein-1 (AP-1), nerve growth factor-regulated factor 1A binding protein 1 (NGF), and peroxisome proliferator activated receptor γ (PPAR-γ), which are elevated in various diseases, such as respiratory tract diseases, renal diseases, cancer, neurodegenerative diseases, and viral infections. Lipoxin-mediated signaling is involved in chronic inflammation, cancer, diabetes-associated kidney disease, lung injury, liver injury, endometriosis, respiratory tract diseases, neurodegenerative diseases, chronic cerebral hypoperfusion, and retinal degeneration. In this study, we systematically investigated the intricate network of lipoxin signaling by analyzing the relevant literature. The resulting map comprised 467 molecules categorized as activation/inhibition, enzyme catalysis, gene and protein expression, molecular associations, and translocation events. This map serves as a valuable resource for understanding the complexity of lipoxin signaling and its impact on various cellular functions.</p>","PeriodicalId":13550,"journal":{"name":"Inflammation Research","volume":"22 1","pages":""},"PeriodicalIF":6.7,"publicationDate":"2024-04-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"140802935","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Inflammation Research
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1