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Alleviation of LPS-induced Endothelial Injury due to GHRH Antagonist Treatment. GHRH 拮抗剂可缓解 LPS 诱导的内皮损伤。
IF 2 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2024-01-01 Epub Date: 2024-10-01 DOI: 10.1007/s10989-024-10653-3
Saikat Fakir, Khadeja-Tul Kubra, Mohammad Shohel Akhter, Mohammad Afaz Uddin, Nektarios Barabutis

Background: GHRH is produced in the hypothalamus and affects various tissues beyond the pituitary, including the lungs. GHRH antagonists exert anti-inflammatory properties in several experimental models of disease, but their role inprotecting the endothelial barrier during inflammation is less understood. This study investigates the effects ofGHRHAnt on LPS-induced endothelial dysfunction.

Methods: BPAEC and HMVEC-L cells were exposed to LPS to induce endothelial injury. GHRHAnt was administered eitherpre- or post-LPS treatment. Western blot analysis was used to evaluate protein expression levels. Paracellularpermeability was assessed utilizing FITC-dextran assay to evaluate endothelial barrier function.

Results: GHRHAnt post-treatment significantly reduced LPS-induced MLC2 phosphorylation and cofilin activation inBPAECs. Furthermore, pretreatment with GHRHAnt enhanced barrier function and ameliorated LPS-inducedhyperpermeability in both human and bovine endothelial cells.

Conclusions: GHRHAnt treatment mitigates LPS-induced endothelial barrier dysfunction. These findings suggest that GHRHAntcould serve as potential therapeutic agents towards endothelial dysfunction-related illness (e.g. sepsis).

背景:GHRH产生于下丘脑,影响垂体以外的各种组织,包括肺部。GHRH拮抗剂在几种疾病的实验模型中具有抗炎特性,但它们在炎症过程中保护内皮屏障的作用却鲜为人知。本研究探讨了 GHRHAnt 对 LPS 诱导的内皮功能障碍的影响:方法:将 BPAEC 和 HMVEC-L 细胞暴露于 LPS 诱导的内皮损伤。在LPS处理前或处理后给予GHRHAnt。采用 Western 印迹分析评估蛋白质表达水平。利用FITC-葡聚糖检测法评估细胞旁通透性,以评价内皮屏障功能:结果:GHRHAnt后处理可明显降低LPS诱导的MLC2磷酸化和Cofilin在BPAECs中的激活。此外,用 GHRHAnt 预处理可增强人和牛内皮细胞的屏障功能,并改善 LPS 诱导的高渗透性:结论:GHRHAnt 治疗可减轻 LPS 诱导的内皮屏障功能障碍。这些研究结果表明,GHRHAnt 可作为内皮功能障碍相关疾病(如败血症)的潜在治疗药物。
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引用次数: 0
The Types and Applications of Peptibodies 蛋白胨抗体的类型和应用
IF 2.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-27 DOI: 10.1007/s10989-023-10582-7
Mohammadmahdi Nemati, Ahmadreza Ahmadi, Ahmad Hashemzehi, Farukhruzi Nasrullozoda, Mohsen Abedi, Masoud Hashemzaei

Peptides as drugs are a promising therapeutic method. Peptides modulate diverse biological processes and are synthesized with high purity. Due to their low cell permeability, peptide drugs target extracellular receptors. The peptibody comprises the biologically active Fc region and the peptide itself. Various peptides with specific biological activities have been successfully fused into the Fc region. These peptide-Fc fusions, also known as peptibodies, offer an excellent therapeutic alternative to monoclonal antibodies. They comprise biologically active peptides bound to the Fc region. This approach retains antibodies' beneficial characteristics, especially the enhanced affinity resulting from Fc dimerization and extended plasma residence time. Peptibodies can be produced in Escherichia coli using recombinant methods. In this study, we describe peptibodies and analyze different types of peptibodies collected for research.

肽类药物是一种前景广阔的治疗方法。肽能调节多种生物过程,而且合成纯度高。由于肽类药物的细胞渗透性低,因此可以靶向细胞外受体。多肽抗体由具有生物活性的 Fc 区域和多肽本身组成。各种具有特定生物活性的多肽已成功融合到 Fc 区。这些多肽-Fc 融合物也被称为蛋白胨抗体,是单克隆抗体的绝佳治疗替代品。它们由与 Fc 区结合的生物活性肽组成。这种方法保留了抗体的有益特性,尤其是因 Fc 二聚化和延长血浆停留时间而增强的亲和力。蛋白胨抗体可通过重组方法在大肠杆菌中生产。在本研究中,我们介绍了蛋白胨抗体,并分析了为研究收集的不同类型的蛋白胨抗体。
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引用次数: 0
Scaled-up Synthesis and Characterization of Oxytocin Trisulfide 三硫化催产素的放大合成与表征
IF 2.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-26 DOI: 10.1007/s10989-023-10580-9
Robert P. Hammer, Melissa A. Butrie, Karen Davidson, Phillip T. Goldblatt, Alex M. Schrader, Joseph J. Dalluge, Allyn Becker, George Barany

The title peptide, oxytocin trisulfide (3), was required on a multi-100 mg scale, as part of an analytical method validation process for the clinically and commercially important product “Oxytocin Injection,” which is a sterile isotonic injectable formulation of oxytocin (2). We report here that previous chemistry from our academic laboratory can be successfully scaled up in the biotechnology sector to indeed provide pure 3 (overall yield 67%, > 95% purity). The scaled-up synthesis also gave rise, somewhat unexpectedly, to modest levels of oxytocin tetrasulfide (4), and even higher homologues. Protocols for synthesis, purification, and characterization [by HPLC, mass spectrometry and amino acid analysis] are described and discussed, along with possible mechanistic explanations for our findings.

作为具有重要临床和商业价值的产品 "催产素注射液"(催产素的无菌等渗注射剂型)(2)的分析方法验证过程的一部分,我们需要将标题肽--三硫化催产素(3)的规模扩大到多达 100 毫克。我们在此报告,我们学术实验室以前的化学方法可以在生物技术领域成功放大,以提供纯的催产素 3(总收率为 6-7%,纯度为 95%)。这种放大合成方法还出乎意料地产生了适量的四硫化催产素(4),甚至更高的同系物。本文介绍并讨论了合成、纯化和表征(通过高效液相色谱法、质谱法和氨基酸分析)的方法,以及我们的发现可能的机理解释。
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引用次数: 0
Evaluation of the Antimicrobial Efficacy of Epidermal Mucus Extract from Air-Breathing Fish (Channa punctatus) and Identification of the Peptides Serving as Immune Components 评估呼吸空气鱼(鳢)表皮粘液提取物的抗菌功效并鉴定作为免疫成分的多肽
IF 2.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-18 DOI: 10.1007/s10989-023-10581-8
Ahmed Hussain, Shashwati Ghosh Sachan

Fish and other members of aquatic habitats are in constant contact with the microbes that trigger their immune system to produce immune components along with mucus. Compounds like lysozymes, proteases, lectins and peroxidase were reported in many studies. The study aims to identify and characterize the immune components present in the epidermal mucus of Channa punctatus. For this, antibacterial and antifungal efficacy was tested first using agar well diffusion assay and MIC was measured. Maximum activity against bacteria’s E. coli, S. aureus and Fungus H. gramineum was observed. FESEM analysis was performed to reveal the mechanism of the antimicrobial activity. Physico–chemical stability of mucus was also checked by exposing to various parameters such as (temperature, pH, proteases and surfactants). Precipitated proteins of mucus were separated using 12% SDS-PAGE assay. The band was digested using trypsin digestion and digested peptides were subjected to LCMSMS analysis for identification and on characterization using MASCOT servers 2 proteins (Hemoglobin subunit beta-A-globin chain and Galactose specific lectins nattectin) with number of fragmented unique peptides were obtained. Insilico predictions of antibacterial, antifungal, antiviral and anticancerous properties of peptides were also determined to support the role of mucus in microbial defense and therapeutical applications using the servers AMPfun, DBAASP and APD3.

鱼类和水生环境中的其他成员经常与微生物接触,这些微生物会触发其免疫系统产生免疫成分和粘液。许多研究都报道了溶菌酶、蛋白酶、凝集素和过氧化物酶等化合物。本研究旨在确定和描述存在于鳢表皮粘液中的免疫成分。为此,首先使用琼脂井扩散法测试了抗菌和抗真菌功效,并测量了 MIC。结果表明,对细菌大肠杆菌、金黄色葡萄球菌和真菌革兰氏菌的活性最高。为了揭示抗菌活性的机理,还对其进行了 FESEM 分析。此外,还通过将粘液暴露于各种参数(温度、pH 值、蛋白酶和表面活性剂)来检测粘液的物理化学稳定性。使用 12% SDS-PAGE 分析法分离沉淀的粘液蛋白质。使用 MASCOT 服务器对 2 种蛋白质(血红蛋白亚基 beta-A- 球蛋白链和半乳糖特异性凝集素 nattectin)进行表征,获得了大量片段化的独特肽。此外,还利用 AMPfun、DBAASP 和 APD3 服务器对肽的抗菌、抗真菌、抗病毒和抗癌特性进行了内部预测,以支持粘液在微生物防御和治疗应用中的作用。
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引用次数: 0
Design and Self Assembly of Tri-Terpene Peptide Conjugates and Their Interactions with EGFR and EGFR Mutant Receptors: An In Silico and In Vitro Study 三萜肽共轭物的设计和自组装及其与表皮生长因子受体和表皮生长因子受体突变受体的相互作用:硅学和体外研究
IF 2.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-14 DOI: 10.1007/s10989-023-10583-6
Mia I. Rico, Beatriz G. Goncalves, Hannah L. Hunt, Ipsita A. Banerjee

In this work, we designed new terpenoid-peptide conjugates to target the epidermal growth factor receptor (EGFR) and its double mutant EGFR T790M/L858R which are implicated in many cancers. The peptides utilized were MEGPSKCCFSLALSH (MFSL), a new peptide sequence designed by mutating an ErbB2 targeting peptide, while the sequence VPWXE was derived from a peptide motif known to target tumor cells. Each of the peptides were conjugated to four terpenoids, 23-hydroxy betulinic acid (HB), oleanolic acid, perillic acid, and ursolic acid. Molecular docking and molecular dynamics (MD) simulations with the kinase domain of both the wild type and double mutant EGFR receptors revealed that the conjugates formed H-bonds and hydrophobic interactions with key residues in the hinge region, A-loop, and DFG motif, while in the case of the double mutant, interactions also occurred with C-terminal residues and with allosteric sites. MMGBSA analysis revealed higher binding energies for the double mutant. Six of the conjugates were synthesized and self-assembled into nanoassemblies and their impact on tumor cells expressing the wild type and double mutant receptor revealed that higher apoptosis was induced by MFSL conjugates, particularly in cells expressing the double mutant EGFR receptor. The HB and ursolate conjugates were found to be more potent against the tumor cell lines. Overall, these results indicate that these peptides and peptide conjugates can effectively bind to both the wild type and the T790M/L858R receptors to target tumor cells. Such peptide conjugates may be further potentially developed as therapeutic agents for further laboratory studies against tumors overexpressing EGFR.

在这项工作中,我们设计了新的萜类肽缀合物来靶向表皮生长因子受体(EGFR)及其双突变体EGFR T790M/L858R,这与许多癌症有关。利用的肽是MEGPSKCCFSLALSH (MFSL),这是一个通过突变ErbB2靶向肽而设计的新肽序列,而序列VPWXE来源于已知的靶向肿瘤细胞的肽基序。每个肽与四种萜类化合物结合,23-羟基白桦酸(HB),齐墩果酸,紫苏酸和熊果酸。与野生型和双突变型EGFR受体激酶结构域的分子对接和分子动力学(MD)模拟显示,共轭物与铰链区、a环和DFG基序的关键残基形成了氢键和疏水相互作用,而在双突变型的情况下,与c端残基和变构位点也发生了相互作用。MMGBSA分析显示双突变体的结合能较高。其中6个偶联物被合成并自组装成纳米组件,它们对表达野生型和双突变受体的肿瘤细胞的影响表明,MFSL偶联物诱导的细胞凋亡率更高,特别是在表达双突变EGFR受体的细胞中。发现HB和熊索酸偶联物对肿瘤细胞系更有效。总之,这些结果表明这些肽和肽偶联物可以有效地结合野生型和T790M/L858R受体靶向肿瘤细胞。这种肽缀合物可能进一步发展为治疗药物,用于进一步的实验室研究,以对抗过表达EGFR的肿瘤。
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引用次数: 0
A Review of the in Silico Design and Development Approaches of Ras-Specific Anticancer Therapeutics ras特异性抗癌药物的芯片设计与开发方法综述
IF 2.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-12-02 DOI: 10.1007/s10989-023-10578-3
Parinaz Motiei, Hamid Reza Heidari, Mohammad Saeid Hejazi, Ommoleila Molavi, Elnaz Mehdizadeh Aghdam

Ras Proteins, play a pivotal role in the proliferation pathways, and Ras mutant forms are well-established cancer drivers. Ras mutations are found in about 30% of all human cancers widely known as challenging diseases to control and treat. The direct inhibition of Ras is challenging and makes Ras an “undruggable” target for many years. The important reason is, that Ras protein has a unique smooth surface and shows different dynamicity upon binding GDP and GTP. As a result, interfering peptides (IPs) targeting the Ras family protein-protein interactions (PPIs) are considered more likely to bind Ras effectively and inhibit the downstream signaling. In this review, we aimed to cover the recent approaches to design the peptides that target Ras family proteins, focusing on in silico methods. In this regard, the anti-cancer peptide development approaches including design and delivery strategies are discussed. Later, more specific methods regarding Ras-specific peptide design are presented. In conclusion, IPs are a promising group of cancer therapeutics to combat Ras mutant cancers. For future perspectives to have these peptides in clinical use, co-inhibition of other cancer targets as well as improving the pharmacokinetic features of peptides are suggested.

Ras蛋白在增殖途径中起着关键作用,Ras突变形式是公认的癌症驱动因素。在大约30%的人类癌症中发现了Ras突变,这些癌症被广泛认为是难以控制和治疗的疾病。直接抑制Ras具有挑战性,使Ras成为多年来“不可药物”的靶点。重要的原因是Ras蛋白具有独特的光滑表面,在结合GDP和GTP时表现出不同的动态性。因此,靶向Ras家族蛋白-蛋白相互作用(PPIs)的干扰肽(IPs)被认为更有可能有效地结合Ras并抑制下游信号传导。在这篇综述中,我们的目的是涵盖最近的方法来设计靶向Ras家族蛋白的肽,重点是在计算机方法。在这方面,讨论了抗癌肽的开发方法,包括设计和递送策略。随后,提出了更具体的ras特异性肽设计方法。总之,IPs是一种很有前途的治疗Ras突变癌症的药物。对于这些肽在临床应用的未来前景,建议共同抑制其他癌症靶点以及改善肽的药代动力学特征。
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引用次数: 0
Cytotoxic Activity of A New Isoform l-Amino Acid Oxidase (Balt-LAAO-II) From Bothrops alternatus (Urutu) Snake Venom in Human Leukemic HL60 Cells 一种新的异型l-氨基酸氧化酶(Balt-LAAO-II)在人白血病HL60细胞中的细胞毒活性
IF 2.5 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-22 DOI: 10.1007/s10989-023-10574-7
Mauricio Aurelio Gomes Heleno, Alexandre Nowill, João Ernesto de Carvalho, Diego L. Suni-Curasi, Julissa Vilca-Quispe, Emilio Alberto Ponce-Fuentes, Gustavo Alberto Obando-Pereda, Luis Alberto Ponce-Soto

In this study, we describe the isolation of a new isoform, l-Amino acid oxidase (LAAO), referred to as Balt-LAAO-II, from Bothrops alternatus snake venom, which was highly purified using a combination of molecular exclusion (Sephadex G-75) and RP-HPLC chromatographic steps. SDS-PAGE analysis showed that purified Balt-LAAO-II had a molecular weight of (sim )66 kDa. The N-terminal amino acid sequence and internal peptide sequences showed close structural homology to those of other snake venom l-Amino acid oxidases. This enzyme induces in vitro cytotoxicity in cultured human leukemic HL60 cells. Cells were grown in RPMI medium and incubated with the isoform Balt-LAAO-II (1, 10, and 100 (mu )g/mL) for up to 72 h. All three concentrations of venom markedly decreased cell viability from 6 h onwards based on staining with propidium iodide, the reduction of 3-(4,5-dimethylthazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT), and the uptake of neutral red. Flow cytometry showed that all isoforms of Balt-LAAO-II and whole venom concentrations induced apoptosis after 2–6 h of incubation. Morphological analysis of cells incubated with the isoform Balt-LAAO-II and whole venom showed cell rounding and lysis, which increased with venom concentration and duration of incubation. These results show that the isoform Balt-LAAO-II from venom Bothrops alternatus is cytotoxic to cultured HL60 cells, suggesting that this damage may involve the apoptotic and oxidative stress pathways.

在这项研究中,我们描述了一个新的异构体,l-氨基酸氧化酶(LAAO),称为Balt-LAAO-II,从交替Bothrops蛇毒分离,采用分子排除(Sephadex G-75)和RP-HPLC相结合的步骤高度纯化。SDS-PAGE分析显示纯化的Balt-LAAO-II分子量为(sim ) 66 kDa。其n端氨基酸序列和内部多肽序列与其他蛇毒l-氨基酸氧化酶具有较强的同源性。该酶对培养的人白血病HL60细胞具有体外细胞毒性。细胞在RPMI培养基中生长,并与Balt-LAAO-II异型(1,10和100 (mu ) g/mL)孵育72小时。根据碘化丙啶染色,3-(4,5-二甲基噻唑-2-基)-2,5-二苯基溴化四唑(MTT)的减少和中性红的摄取,所有三种浓度的毒液从6小时开始显着降低细胞活力。流式细胞术显示,孵育2-6 h后,Balt-LAAO-II的所有亚型和全毒浓度均诱导细胞凋亡。与Balt-LAAO-II异型和全毒孵育的细胞形态学分析显示细胞圆缩和溶解,随毒液浓度和孵育时间的增加而增加。这些结果表明,来自黄颡鱼毒液的Balt-LAAO-II异构体对培养的HL60细胞具有细胞毒性,表明这种损伤可能涉及凋亡和氧化应激途径。
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引用次数: 2
Peptidomic Analysis and Potential Bioactive Peptides Identification Targeting Endometrial Cancer 针对子宫内膜癌的肽组学分析及潜在生物活性肽鉴定
4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-13 DOI: 10.1007/s10989-023-10573-8
Hanzi Xu, Shenglong Yuan, Lin Zhou, Huixin Li, Juan Lv, Xiaoyan Shi, Wangfei Wu, Zhijian Feng, Zhen Gong
{"title":"Peptidomic Analysis and Potential Bioactive Peptides Identification Targeting Endometrial Cancer","authors":"Hanzi Xu, Shenglong Yuan, Lin Zhou, Huixin Li, Juan Lv, Xiaoyan Shi, Wangfei Wu, Zhijian Feng, Zhen Gong","doi":"10.1007/s10989-023-10573-8","DOIUrl":"https://doi.org/10.1007/s10989-023-10573-8","url":null,"abstract":"","PeriodicalId":14217,"journal":{"name":"International Journal of Peptide Research and Therapeutics","volume":"59 7","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"136347031","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Correction: Anti-Inflammatory Mechanism of Walnut Meal Peptide/ Ellagic Acid Nanoparticles on LPS-Stimulated RAW264.7 Cells by Inhibition of NFκB and MAPK Activation 更正:核桃粕肽/鞣花酸纳米颗粒通过抑制NFκB和MAPK活化对lps刺激的RAW264.7细胞的抗炎机制
4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-09 DOI: 10.1007/s10989-023-10579-2
Yuxi Ling, Yanxia Feng, Ziqi Li, Le Cheng, Xuan Zhang, Difeng Ren
{"title":"Correction: Anti-Inflammatory Mechanism of Walnut Meal Peptide/ Ellagic Acid Nanoparticles on LPS-Stimulated RAW264.7 Cells by Inhibition of NFκB and MAPK Activation","authors":"Yuxi Ling, Yanxia Feng, Ziqi Li, Le Cheng, Xuan Zhang, Difeng Ren","doi":"10.1007/s10989-023-10579-2","DOIUrl":"https://doi.org/10.1007/s10989-023-10579-2","url":null,"abstract":"","PeriodicalId":14217,"journal":{"name":"International Journal of Peptide Research and Therapeutics","volume":" 44","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135241755","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Investigating the Effects of Temporin-Rb, an Antimicrobial Peptide, on Cell Viability and Pro-inflammatory Gene Expression in A549 Cells 抗菌肽Temporin-Rb对A549细胞活力和促炎基因表达的影响
4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2023-11-09 DOI: 10.1007/s10989-023-10576-5
Niloufar Shakibapour, Ahmad Asoodeh, Yasamin Yousefi, Jamshidkhan Chamani
{"title":"Investigating the Effects of Temporin-Rb, an Antimicrobial Peptide, on Cell Viability and Pro-inflammatory Gene Expression in A549 Cells","authors":"Niloufar Shakibapour, Ahmad Asoodeh, Yasamin Yousefi, Jamshidkhan Chamani","doi":"10.1007/s10989-023-10576-5","DOIUrl":"https://doi.org/10.1007/s10989-023-10576-5","url":null,"abstract":"","PeriodicalId":14217,"journal":{"name":"International Journal of Peptide Research and Therapeutics","volume":" 15","pages":"0"},"PeriodicalIF":0.0,"publicationDate":"2023-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"135242633","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
International Journal of Peptide Research and Therapeutics
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