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Synthesis and Biological Evaluation of N-(1H-Indol-6-ylmethyl)benzenesulfonamide Analogs as Metabolic Inhibitors of Mitochondrial ATP Production in Pancreatic Cancer Cells. 作为胰腺癌细胞线粒体 ATP 生成代谢抑制剂的 N-(1H-吲哚-6-基甲基)苯磺酰胺类似物的合成与生物学评价。
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-24 DOI: 10.1002/cmdc.202400536
Zachary C Brandeburg, Sakariyau A Waheed, Carina A Derewonko, Caroline E Dunn, Ethan C Pfeiffer, Ann Marie E Flusche, Robert J Sheaff, Angus A Lamar

A library of 26 indolyl sulfonamides and 12 amide and ester analogs based upon the 6-indolyl framework has been synthesized in an effort to target pancreatic cancer. The cytotoxicity of the indolyl sulfonamide compounds has been determined using a traditional (48-hour compound exposure) assay against 7 pancreatic cancer cell lines and 1 non-cancerous cell line. The potential role of the compounds as metabolic inhibitors of ATP production was evaluated using a rapid screening (2-hour compound exposure) assay developed within our laboratories. The IC50 values of the active compounds were determined using the rapid assay and six compounds displayed an IC50 value <5 μM against one or more pancreatic cancer cell lines. The ester analogs also display significant activity as potential metabolic inhibitors of ATP production with four of the six compounds displaying an IC50 value <5 μM against one or more pancreatic cancer cell lines.

我们合成了一个由 26 种吲哚基磺酰胺类化合物和 12 种基于 6-吲哚基框架的酰胺和酯类类似物组成的化合物库,旨在靶向治疗胰腺癌。吲哚基磺酰胺化合物的细胞毒性是通过传统的(48 小时化合物暴露)试验,针对 7 种胰腺癌细胞系和 1 种非癌细胞系进行测定的。我们还利用实验室开发的快速筛选(化合物暴露 2 小时)试验评估了这些化合物作为 ATP 生成代谢抑制剂的潜在作用。使用快速测定法确定了活性化合物的 IC50 值。
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引用次数: 0
We are MedChem: The Frontiers in Medicinal Chemistry 2024. 我们是 MedChem:2024 年药物化学前沿。
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-23 DOI: 10.1002/cmdc.202400543
Matthias Schiedel, Philipp Barbie, Felix Pape, Marta Pinto, Andrea Unzue Lopez, María Méndez, Gerhard Hessler, Daniel Merk, Matthias Gehringer, Christina Lamers

The Frontiers in Medicinal Chemistry (FiMC) is the largest international Medicinal Chemistry conference in Germany and took place from March 17th to 20th 2024 in Munich. Co-organized by the Division of Medicinal Chemistry of the German Chemical Society (Gesellschaft Deutscher Chemiker; GDCh) and the Division of Pharmaceutical and Medicinal Chemistry of the German Pharmaceutical Society (Deutsche Pharmazeutische Gesellschaft; DPhG), and supported by a local organizing committee from the Ludwigs-Maximilians-University Munich headed by Daniel Merk, the meeting brought together approximately 225 participants from 20 countries. The outstanding program of the four-day conference included 40 lectures by leading scientists from industry and academia as well as early career investigators. Moreover, 100 posters were presented in two highly interactive poster sessions.

药物化学前沿会议(FiMC)是德国最大的国际药物化学会议,于 2024 年 3 月 17 日至 20 日在慕尼黑举行。本次会议由德国化学学会药物化学分会(Gesellschaft Deutscher Chemiker; GDCh)和德国药学会制药和药物化学分会(Deutsche Pharmazeutische Gesellschaft; DPhG)联合主办,并得到了以丹尼尔-默克(Daniel Merk)为首的慕尼黑路德维希-马克西米利安大学当地组委会的大力支持。在为期四天的会议中,来自工业界和学术界的顶尖科学家以及早期研究人员共举办了 40 场精彩讲座。此外,在两场互动性极强的海报展示会上还展出了 100 张海报。
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引用次数: 0
Evaluation of a Radioiodinated G-quadruplex Binder in Cervical Cancer Models 在宫颈癌模型中评估放射性碘化 G-四联粘合剂
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-20 DOI: 10.1002/cmdc.202400438
António Paulo, Maria Cristina Oliveira, Maria Paula Cabral Campello, Lurdes Gano, Paula Raposinho, Ana Belchior, Edgar Mendes, Catarina D. Silva, Jéssica Lopes-Nunes, Carla Cruz
We herein describe the radiosynthesis of a 125I-labeled acridine orange derivative ([125I]-C8), acting as a G-quadruplex binder, and its biological evaluation in cervical cancer models, aiming to enlighten its potential as a radioligand for Auger Electron Radiopharmaceutical Therapy (AE-RPT) of cancer. [125I]-C8 was synthesized with a moderate radiochemical yield (ca. 60 %) by a [125I]iodo-destannylation reaction. Its evaluation in cervical cancer HeLa cells demonstrated that the radiocompound has a significant cellular internalization with a notorious accumulation in the cell nucleus. In line with these results, [125I]-C8 strongly compromised the viability of HeLa cells in a dose-dependent manner, inducing non-repairable DNA lesions that are most probably due to the AEs emitted by 125I in close proximity to the DNA. Biodistribution studies in a murine HeLa xenograft model showed that [125I]-C8 has fast blood clearance and high in vivo stability but poor tumor uptake, after systemic administration. The respective supramolecular conjugate with the AS1411 aptamer ([125I]-C8/AS1411) led to a slower blood clearance in the same animal tumor model, although without improving the tumor uptake. To take advantage of the radiotoxicity of [125I]-C8 against cervical cancer cells other strategies need to be studied, based namely on alternative nanodelivery carriers and/or intratumoral injection approaches.
我们在本文中描述了一种 125I 标记的吖啶橙衍生物([125I]-C8)的放射合成及其在宫颈癌模型中的生物学评估,旨在揭示其作为奥杰电子放射药物治疗(AE-RPT)癌症的放射性配体的潜力。[125I]-C8是通过[125I]碘-脱烷反应合成的,放射化学收率中等(约60%)。在宫颈癌 HeLa 细胞中对其进行的评估表明,这种放射性化合物具有明显的细胞内化作用,并在细胞核中蓄积。与这些结果一致,[125I]-C8 会以剂量依赖的方式严重损害 HeLa 细胞的活力,诱发不可修复的 DNA 损伤,这很可能是由于 125I 在 DNA 附近释放的 AE 所致。在小鼠 HeLa 异种移植模型中进行的生物分布研究表明,全身给药后,[125I]-C8 的血液清除速度快,体内稳定性高,但肿瘤摄取率低。在同一动物肿瘤模型中,[125I]-C8与AS1411适配体的超分子共轭物([125I]-C8/AS1411)的血液清除率较慢,但肿瘤摄取率没有改善。要利用[125I]-C8的放射毒性来对付宫颈癌细胞,还需要研究其他策略,即基于替代纳米给药载体和/或瘤内注射方法的策略。
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引用次数: 0
Exploring the Chemical Space of Mycobacterial Oxidative Phosphorylation Inhibitors Using Molecular Modeling 利用分子建模探索分枝杆菌氧化磷酸化抑制剂的化学空间
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-20 DOI: 10.1002/cmdc.202400303
Islam K. Matar, Zhongmin Dong, Chérif F. Matta
Intracellular pathogens are exceedingly clinically challenging, including pathogenic mycobacteria. Many global efforts are currently in action to battle these notorious disease agents. This review provides an overview of mycobacteria, along with their associated diseases, pathogenesis, and exploitable respiratory vulnerabilities to supplement contemporary antimycobacterial discovery.
细胞内病原体在临床上极具挑战性,其中包括致病分枝杆菌。目前,全球正在采取多项措施与这些臭名昭著的病原体作斗争。本综述概述了分枝杆菌及其相关疾病、致病机理和可利用的呼吸道弱点,以补充当代抗分枝杆菌发现的不足。
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引用次数: 0
Discovery of KW0113 as a First and Effective PROTAC Degrader of DNMT1 Protein 发现 KW0113 是首个有效的 DNMT1 蛋白 PROTAC 降解剂
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-20 DOI: 10.1002/cmdc.202400467
Huihui Wang, Zhaoliang Wang, Linghao Hu, Bingjie Yang, Liangyi Zong, Dounan Xu, Bo Yu, Xiangqian Kong, Mingliang Wang
DNA methyltransferase 1 (DNMT1) is an attractive therapeutic target for acute myelocytic leukemia (AML) and other malignancies. It has been reported that the genetic depletion of DNMT1 inhibited AML cell proliferation through reversing DNA methylation abnormalities. However, no DNMT1-targeted PROTAC degraders have been reported yet. Herein, a series of proteolysis-targeting chimera (PROTAC) degrader of DNMT1 based on dicyanopyridine scaffold and VHL E3 ubiquitin ligase ligand was developed. Among them, KW0113 (DC50 = 643/899 nM in MV4-11/MOLM-13 cells) exhibited optimal DNMT1 degradation. KW0113 induced DNMT1-selective degradation in a dose- and time-dependent manner through VHL engagement. Moreover, KW0113 inhibited AML cell growth by reversing promoter DNA hypermethylation and tumor-suppressor genes silencing. In conclusion, these findings proved the capability of PROTAC strategy for inducing DNMT1 degradation, demonstrated the therapeutic potential of DNMT1-targeted PROTACs. This work also provided a convenient chemical knockdown tool for DNMT1-related studies.
DNA 甲基转移酶 1(DNMT1)是治疗急性髓细胞白血病(AML)和其他恶性肿瘤的一个极具吸引力的靶点。据报道,通过逆转 DNA 甲基化异常,遗传性去掉 DNMT1 可抑制 AML 细胞增殖。然而,目前还没有关于 DNMT1 靶向 PROTAC 降解剂的报道。在此,我们开发了一系列基于双氰基吡啶支架和 VHL E3 泛素连接酶配体的 DNMT1 蛋白分解靶向嵌合体(PROTAC)降解剂。其中,KW0113(在 MV4-11/MOLM-13 细胞中的 DC50 = 643/899 nM)表现出最佳的 DNMT1 降解效果。KW0113 通过 VHL 参与,以剂量和时间依赖的方式诱导 DNMT1 选择性降解。此外,KW0113还能通过逆转启动子DNA高甲基化和肿瘤抑制基因沉默来抑制AML细胞的生长。总之,这些发现证明了 PROTAC 策略诱导 DNMT1 降解的能力,展示了 DNMT1 靶向 PROTACs 的治疗潜力。这项工作还为 DNMT1 相关研究提供了一种便捷的化学敲除工具。
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引用次数: 0
Crystallographic and Selectivity Studies on the Approved HIF Prolyl Hydroxylase Inhibitors Desidustat and Enarodustat 已获批准的 HIF 脯氨酰羟化酶抑制剂 Desidustat 和 Enarodustat 的晶体学和选择性研究
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-18 DOI: 10.1002/cmdc.202400504
Thomas P. Corner, Eidarus Salah, Anthony Tumber, Samanpreet Kaur, Yu Nakashima, Mark D. Allen, Lara I. Schnaubelt, Giorgia Fiorini, Lennart Brewitz, Christopher Schofield
Prolyl hydroxylase domain‐containing proteins 1‐3 (PHD1‐3) are 2‐oxoglutarate (2OG)‐dependent oxygenases catalysing C‐4 hydroxylation of prolyl residues in α‐subunits of the heterodimeric transcription factor hypoxia‐inducible factor (HIF), modifications that promote HIF‐α degradation via the ubiquitin‐proteasome pathway. Pharmacological inhibition of the PHDs induces HIF‐α stabilisation, so promoting HIF target gene transcription. PHD inhibitors are used to treat anaemia caused by chronic kidney disease (CKD) due to their ability to stimulate erythropoietin (EPO) production. We report studies on the effects of the approved PHD inhibitors Desidustat and Enarodustat, and the clinical candidate TP0463518, on activities of a representative set of isolated recombinant human 2OG oxygenases. The three molecules manifest selectivity for PHD inhibition over that of the other 2OG oxygenases evaluated. We obtained crystal structures of Desidustat and Enarodustat in complex with the human 2OG oxygenase factor inhibiting hypoxia‐inducible factor‐α (FIH), which, together with modelling studies, inform on the binding modes of Desidustat and Enarodustat to active site Fe(II) in 2OG oxygenases, including PHD1‐3. The results will help in the design of selective inhibitors of both the PHDs and other 2OG oxygenases, which are of medicinal interest due to their involvement inter alia in metabolic regulation, epigenetic signalling, DNA‐damage repair, and agrochemical resistance.
含脯氨酰羟化酶结构域的蛋白 1-3(PHD1-3)是依赖于 2-氧代戊二酸(2OG)的氧合酶,可催化异源二聚体转录因子缺氧诱导因子(HIF)α 亚基中脯氨酰残基的 C-4 羟基化,这种修饰可促进 HIF-α 通过泛素-蛋白酶体途径降解。药理抑制 PHD 可诱导 HIF-α 稳定,从而促进 HIF 靶基因的转录。PHD 抑制剂能刺激促红细胞生成素(EPO)的产生,因此被用于治疗慢性肾病(CKD)引起的贫血症。我们报告了已获批准的 PHD 抑制剂 Desidustat 和 Enarodustat 以及临床候选药物 TP0463518 对一组有代表性的分离重组人 2OG 加氧酶活性的影响。这三种分子对 PHD 的抑制作用比对其他 2OG 加氧酶的抑制作用更具选择性。我们获得了德司达和依纳洛司达与人 2OG 加氧酶抑制低氧诱导因子-α(FIH)因子复合物的晶体结构,结合模型研究,这些结构说明了德司达和依纳洛司达与包括 PHD1-3 在内的 2OG 加氧酶活性位点铁(II)的结合模式。这些结果将有助于设计 PHDs 和其他 2OG 加氧酶的选择性抑制剂,由于这些酶参与新陈代谢调节、表观遗传信号、DNA 损伤修复和农用化学品抗性等,因此具有药用价值。
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引用次数: 0
Bacterial Secondary Metabolites Embedded in Producer Cell Membranes and Antibiotics Targeting Their Biosynthesis 嵌入生产者细胞膜的细菌次生代谢物和针对其生物合成的抗生素
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-17 DOI: 10.1002/cmdc.202400469
Zhao Xia, Hao Xiang, Yi-Ming Shi
The bacterial cell membrane primarily houses lipids, carbohydrates, and proteins forming a barrier and interface that maintains cellular integrity, supports homeostasis, and senses environmental changes. Compared to lipid components and excreted secondary metabolites, compounds embedded in the producer cell membrane are often overlooked due to their low abundance and niche‐specific functions. The accumulation of findings has led to an increased appreciation of their crucial roles in bacterial cell biochemistry, physiology, and ecology, as well as their impact on mutualistic and pathogenic bacteria‐eukaryote interactions. This review highlights the structures, biosynthesis, regulation, and ecological functions of membrane‐embedded secondary metabolites. It also discusses antibiotics that target their biosynthetic pathways, aiming to inspire the development of antibiotics specific to pathogenic bacteria without harming human cells.
细菌细胞膜主要容纳脂质、碳水化合物和蛋白质,形成一个屏障和界面,以维持细胞完整性、支持平衡和感知环境变化。与脂质成分和排泄的次级代谢物相比,生产者细胞膜中的化合物由于丰度低和具有特定的功能而经常被忽视。随着研究结果的不断积累,人们越来越认识到它们在细菌细胞生物化学、生理学和生态学中的关键作用,以及它们对细菌-真核生物互作和致病的影响。本综述重点介绍了膜固着次生代谢物的结构、生物合成、调节和生态功能。它还讨论了针对其生物合成途径的抗生素,旨在启发人们开发专门针对病原菌的抗生素,同时又不伤害人体细胞。
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引用次数: 0
Ultrasound-Assisted Synthesis of Pyrazoline Derivatives as Potential Antagonists of RAGE-Mediated Pathologies: Insights from SAR Studies and Biological Evaluations 超声辅助合成吡唑啉衍生物作为 RAGE 介导的病理学的潜在拮抗剂:SAR 研究和生物评估的启示
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-17 DOI: 10.1002/cmdc.202400527
Anca-Elena Dascălu, Christophe Furman, Steve Lancel, Emmanuelle Lipka, Maxime Liberelle, Eric Boulanger, Alina Ghinet
In the context of age-related disorders, the receptor of advanced glycation end products (RAGE), plays a pivotal role in the pathogenesis of these conditions by triggering downstream signaling pathways associated with chronic inflammation and oxidative stress. Targeting this inflammaging phenomenon with RAGE antagonists holds promise for interventions with broad implications in healthy aging and the management of age-related conditions. This study explores the structure-activity relationship (SAR) of pyrazoline-based RAGE antagonists synthesized using an ultrasound-assisted green one-pot two-steps methodology. Our investigation identifies phenylurenyl-pyrazoline 2g as a promising candidate, demonstrating superior efficiency compared to the reference antagonist Azeliragon (IC50 = 13 µM). Compound 2g exhibits potent inhibition of the AGE2-BSA/sRAGE interaction (IC50 = 22 µM) and favorable affinity in Microscale Thermophoresis (MST) assays (Kd = 17.1 µM), along with a favorable safety profile, with no apparent cytotoxicity observed in vitro in the MTS assay. These findings underscore the potential of pyrazoline-derived RAGE antagonists as therapeutic agents for addressing age-related disorders.
在与年龄有关的疾病中,高级糖化终产物受体(RAGE)通过触发与慢性炎症和氧化应激有关的下游信号通路,在这些疾病的发病机制中发挥着关键作用。利用 RAGE 拮抗剂靶向这一炎症现象,有望对健康老龄化和老年相关疾病的治疗产生广泛影响。本研究采用超声辅助绿色一锅两步法合成了吡唑啉基 RAGE 拮抗剂,并对其结构-活性关系(SAR)进行了探索。我们的研究发现,苯基脲基吡唑啉 2g 是一种很有前途的候选化合物,与参考拮抗剂 Azeliragon(IC50 = 13 µM)相比,具有更高的效率。化合物 2g 对 AGE2-BSA/sRAGE 相互作用具有强效抑制作用(IC50 = 22 µM),在微尺度热泳 (MST) 试验中具有良好的亲和力(Kd = 17.1 µM),同时具有良好的安全性,在体外 MTS 试验中未观察到明显的细胞毒性。这些研究结果凸显了吡唑啉衍生的 RAGE 拮抗剂作为治疗药物治疗老年相关疾病的潜力。
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引用次数: 0
Medicinal Chemistry in Bosnia and Herzegovina ‐ Past, Present and Perspectives** 波斯尼亚和黑塞哥维那的药物化学--过去、现在和前景**
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-17 DOI: 10.1002/cmdc.202400669
Martin Kondža
Although Bosnia and Herzegovina has had a rich history in medicines and traditional medicines, it historically had poor activity regarding the field of medicinal chemistry in the country. However, this has changed recently as Bosnia and Herzegovina has shown immense potential in this field. A significant milestone occurred in 2019, with the establishment of the Organization Pharmaceutical Research Institute. This non‐governmental organization aims to improve medicinal chemistry in Bosnia and Herzegovina. Through research, partnerships, and educational initiatives, the organization has made substantial strides in promoting pharmaceutical research, education, and innovation. Moreover, the country‘s membership in the European Federation for Medicinal Chemistry and Chemical Biology (EFMC) has further facilitated collaboration with European experts, access to cutting‐edge knowledge and technologies, and harmonization with European standards. Looking to the future, this organization endeavors to improve healthcare, encourage innovation in medicinal chemistry, and promote the development of new therapies. With the efforts to establish an Association of Chemists in Bosnia and Herzegovina, the nation‘s scientific community is poised to flourish, contributing to the advancement of medicinal chemistry and healthcare in the region.
尽管波斯尼亚和黑塞哥维那在医药和传统医药方面有着悠久的历史,但该国在药物 化学领域的活动历来不多。然而,随着波斯尼亚和黑塞哥维那在这一领域展现出巨大的潜力,这种情况最近发生了变化。2019 年,随着 "组织药物研究所 "的成立,出现了一个重要的里程碑。该非政府组织旨在改善波斯尼亚和黑塞哥维那的药物化学。通过研究、合作和教育活动,该组织在促进药物研究、教育和创新方面取得了长足进步。此外,波斯尼亚和黑塞哥维那作为欧洲药物化学和化学生物学联合会(EFMC)的成员,进一步促进了与欧洲专家的合作、尖端知识和技术的获取以及与欧洲标准的协调。展望未来,该组织致力于改善医疗保健,鼓励药物化学创新,促进新疗法的开发。随着波斯尼亚和黑塞哥维那化学家协会的成立,该国的科学界将蓬勃发展,为该地区药物化学和医疗保健的进步做出贡献。
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引用次数: 0
Front Cover: Rational Design of Novel Allosteric EYA2 Inhibitors as Potential Therapeutics for Multiple Brain Cancers (ChemMedChem 18/2024) 封面:作为多种脑癌潜在治疗药物的新型异位EYA2抑制剂的合理设计(ChemMedChem 18/2024)
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-16 DOI: 10.1002/cmdc.202481801
Lukas Gardner, John Rossi, Brock Armstrong, Mia Muse, Alex LaVeck, Melanie A. Blevins, Lingdi Zhang, Dr. Heide L. Ford, Dr. Rui Zhao, Dr. Xiang Wang

Protein-ligand docking simulation showing hydrogen bonding in green and Pi-Pi stacking in cyan between EYA2 and a novel inhibitor. Several new interactions are found in this study leading to >30-fold increase of potency relative to the previous lead analog. Many analogs in the series expanded our knowledge on beneficial interactions between the protein and potential inhibitors. This new series of inhibitors provides further insight into treatment of many cancer lines including Glioblastoma and Medulloblastoma. More details can be found in article 10.1002/cmdc.202400179 by Heide L. Ford, Rui Zhao, Xiang Wang, and co-workers.

蛋白质-配体对接模拟显示 EYA2 与新型抑制剂之间的氢键(绿色)和 Pi-Pi 堆叠(青色)。这项研究发现了几种新的相互作用,与之前的先导类似物相比,其效力提高了 30 倍。该系列中的许多类似物扩展了我们对蛋白质与潜在抑制剂之间有益相互作用的了解。这一系列新的抑制剂为治疗包括胶质母细胞瘤和髓母细胞瘤在内的多种癌症提供了进一步的见解。更多详情请见 Heide L. Ford、Rui Zhao、Xiang Wang 及合作者撰写的文章 10.1002/cmdc.202400179。
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引用次数: 0
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