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α-Triazolylboronic Acids: A Novel Scaffold to Target FLT3 in AML. α- 三唑硼酸:针对急性髓细胞白血病 FLT3 的新型支架。
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-27 DOI: 10.1002/cmdc.202400622
M L Introvigne, L Destro, L Mologni, V Crippa, P Zardi, F Fini, L F Prati, E Caselli, A Zambon

The treatment of acute myeloid leukemia (AML) presents a challenge to current therapies because of the development of drug resistance. Genetic mutation of FMS-like tyrosine kinase-3 (FLT3) is a target of interest for AML treatment, but the use of FLT3-targeting agents on AML patients has so far resulted in poor overall clinical outcomes.[1] The incorporation of the boronic group in a drug scaffold could enhance the bioavailability and pharmacokinetic profile of conventional anticancer chemotypes. Boronic acids represent an intriguing and unexplored class of compounds in the context of AML, and they are only scantly reported as inhibitors of protein kinases. We identified α-triazolylboronic acids as a novel chemotype for targeting FLT3 by screening a library of structurally heterogeneous in-house boronic acids. Selected compounds show low micromolar activities on enzymatic and cellular assays, selectivity against control cell lines and a recurring binding mode in in-silico studies. Furthermore, control analogues synthesized ad hoc and lacking the boronic acid are inactive, confirming that this group is essential for the activity of the series. All together, these results suggest α-triazolylboronic acids could be a promising novel chemotype for FLT3 inhibition, laying the ground for the design of further compounds.

由于耐药性的产生,急性髓性白血病(AML)的治疗对目前的疗法提出了挑战。FMS类酪氨酸激酶-3(FLT3)的基因突变是治疗急性髓性白血病的一个靶点,但迄今为止,对急性髓性白血病患者使用FLT3靶向药物的总体临床疗效不佳1。在治疗急性髓细胞性白血病方面,硼酸是一类令人感兴趣且尚未开发的化合物,目前仅有少量关于它们作为蛋白激酶抑制剂的报道。我们通过筛选结构异构的内部硼酸化合物库,确定了 a-三唑基硼酸作为靶向 FLT3 的新型化学类型。筛选出的化合物在酶和细胞实验中显示出较低的微摩尔活性、对对照细胞系的选择性以及在室内研究中的重复结合模式。此外,临时合成的、缺少硼酸的对照类似物也没有活性,这证实了该基团对该系列化合物的活性至关重要。综上所述,这些结果表明α-三唑基硼酸可能是一种很有前景的抑制FLT3的新型化学类型,为进一步设计化合物奠定了基础。
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引用次数: 0
Lasamide Containing Sulfonylpiperazines as Effective Agents for the Management of Glaucoma Associated Symptoms 含磺酰基哌嗪的拉扎酰胺是治疗青光眼相关症状的有效药物
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-25 DOI: 10.1002/cmdc.202400601
fabrizio carta, Jaydeo T. Kilbile, Suryakant B. Sapkal, Gioele Renzi, Ilaria D’Agostino, Mohamed Boudjelal, Yasinalli Tamboli, Luigi Cutarella, Mattia Mori, Silvia Sgambellone, Serafina Villano, Silvia Marri, Laura Lucarini, Simone Carradori, Claudiu T. Supuran
A series of 2,4-dichloro-5-{[4-(phenylsulfonyl)piperazin-1-yl]carbonyl}benzenesulfonamide were designed and synthesized through amidation of Lasamide 1 with substituted piperazines. The newly obtained compounds demonstrated remarkable inhibition potency and selectivity for the human (h) expressed Carbonic Anhydrase (CA; EC 4.2.1.1) II isoform. Selected compounds 7 and 9 were considered in an in vivo model of glaucoma and showed relevant performances with the latter being able to last the effect up to 4 hours. The results herein reported are in sustainment of Lasamide derivatives as a new class of compounds potentially exploitable for the management of uncontrolled IOP.
通过对 Lasamide 1 与取代的哌嗪进行酰胺化,设计并合成了一系列 2,4-二氯-5-{[4-(苯磺酰基)哌嗪-1-基]羰基}苯磺酰胺。新得到的化合物对人(h)表达的碳酸酐酶(CA;EC 4.2.1.1)II 同工酶具有显著的抑制效力和选择性。在青光眼的体内模型中对所选化合物 7 和 9 进行了研究,结果表明这两种化合物具有相关的性能,其中后者的作用时间可长达 4 小时。本文报告的结果表明,Lasamide 衍生物是一类新的化合物,可用于治疗不受控制的眼压。
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引用次数: 0
The Role of Protein Disulfide Isomerase Inhibitors in Cancer Therapy 蛋白二硫异构酶抑制剂在癌症治疗中的作用
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-25 DOI: 10.1002/cmdc.202400590
Qiuying Nie, Junwei Yang, Xiedong Zhou, Na Li, Junmin Zhang
Protein disulfide isomerase (PDI) is a member of the mercaptan isomerase family, primarily located in the endoplasmic reticulum (ER). At least 21 PDI family members have been identified. PDI plays a key role in protein folding, correcting misfolded proteins, and catalyzing disulfide bond formation, rearrangement, and breaking. It also acts as a molecular chaperone. Dysregulation of PDI activity is thus linked to diseases such as cancer, infections, immune disorders, thrombosis, neurodegenerative diseases, and metabolic disorders. In particular, elevated intracellular PDI levels can enhance cancer cell proliferation, metastasis, and invasion, making it a potential cancer marker. Cancer cells require extensive protein synthesis, with disulfide bond formation by PDI being a critical producer. Thus, cancer cells have higher PDI levels than normal cells. Targeting PDI can induce ER stress and activate the Unfolded Protein Response (UPR) pathway, leading to cancer cell apoptosis. This review discusses the structure and function of PDI, PDI inhibitors in cancer therapy, and the limitations of current inhibitors, proposing especially future directions for developing new PDI inhibitors.
蛋白二硫异构酶(PDI)是巯基异构酶家族的成员,主要位于内质网(ER)中。目前已发现至少 21 个 PDI 家族成员。PDI 在蛋白质折叠、纠正错误折叠的蛋白质以及催化二硫键的形成、重排和断裂方面发挥着关键作用。它还充当分子伴侣。因此,PDI 活性失调与癌症、感染、免疫紊乱、血栓形成、神经退行性疾病和代谢紊乱等疾病有关。特别是,细胞内 PDI 水平的升高会促进癌细胞的增殖、转移和侵袭,使其成为一种潜在的癌症标志物。癌细胞需要大量的蛋白质合成,而 PDI 形成的二硫键是关键的生产者。因此,癌细胞的 PDI 水平高于正常细胞。以 PDI 为靶标可诱导 ER 应激,激活折叠蛋白反应(UPR)途径,从而导致癌细胞凋亡。这篇综述讨论了 PDI 的结构和功能、PDI 抑制剂在癌症治疗中的作用以及现有抑制剂的局限性,并特别提出了开发新的 PDI 抑制剂的未来方向。
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引用次数: 0
Synthesis and Structure-Activity Relationship Analysis of 2-Substituted-1,2,4-Triazolo[1,5-a]Pyrimidin-7-Ones and their 6-Carboxylate Derivatives as Xanthine Oxidase Inhibitors. 作为黄嘌呤氧化酶抑制剂的 2-取代-1,2,4-三唑并[1,5-a]嘧啶-7-酮及其 6-羧酸衍生物的合成和结构-活性关系分析。
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-24 DOI: 10.1002/cmdc.202400598
Giuseppe Luna, Anton V Dolzhenko, Ricardo L Mancera

Hyperuricemia is characterised by high blood levels of uric acid, and it can degenerate into gout when monosodium urate crystals precipitate in joints and other tissues. Uric acid is produced during the catabolism of xanthine by the enzyme xanthine oxidase (XO), which is the primary therapeutic target in gout treatment. Current XO inhibitors approved to treat gout, such as allopurinol and febuxostat, suffer from serious adverse effects, creating the need for new drug molecules. Three libraries comprising 75 purine analogues were designed using a 1,2,4-triazolo[1,5-a]pyrimidine scaffold, synthesised and tested in vitro as potential XO inhibitors. The screening identified that 23 compounds exhibited better inhibitory activity than allopurinol, with 2-(4-isopropoxyphenyl)-7-oxo-4,7-dihydro-1,2,4-triazolo[1,5-a]pyrimidine-6-carboxylic acid being 23 times more potent. Enzyme kinetics studies and molecular docking simulations were performed on the most active compounds to identify the mechanism of action and intermolecular interactions between the active site of XO and the inhibitors. The most potent compounds exhibited a mix-type inhibition mechanism and were predicted to interact with the same amino acid residues as allopurinol. These novel purine analogues are promising hits for further new lead development among purine-like drug XO inhibitors with therapeutic potential in the treatment of hyperuricemia and associated diseases.

高尿酸血症的特征是血液中尿酸水平过高,当尿酸单钠结晶沉淀在关节和其他组织中时,就会演变成痛风。尿酸是由黄嘌呤氧化酶(XO)在分解黄嘌呤的过程中产生的,而黄嘌呤氧化酶是痛风治疗的主要靶点。目前被批准用于治疗痛风的 XO 抑制剂(如别嘌醇和非布索坦)存在严重的不良反应,因此需要新的药物分子。研究人员利用 1,2,4- 三唑并[1,5-a]嘧啶支架设计了由 75 种嘌呤类似物组成的三个文库,并将其合成为潜在的 XO 抑制剂并进行了体外测试。筛选结果表明,23 种化合物的抑制活性优于别嘌醇,其中 2-(4-异丙氧基苯基)-7-氧代-4,7-二氢-1,2,4-三唑并[1,5-a]嘧啶-6-羧酸的抑制活性是别嘌醇的 23 倍。对最有效的化合物进行了酶动力学研究和分子对接模拟,以确定其作用机制以及 XO 活性位点与抑制剂之间的分子间相互作用。最有效的化合物表现出一种混合型抑制机制,并被预测与别嘌醇具有相同的氨基酸残基相互作用。这些新型嘌呤类似物是进一步开发嘌呤类药物 XO 抑制剂新线索的希望所在,具有治疗高尿酸血症及相关疾病的潜力。
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引用次数: 0
Synthesis and Biological Evaluation of N-(1H-Indol-6-ylmethyl)benzenesulfonamide Analogs as Metabolic Inhibitors of Mitochondrial ATP Production in Pancreatic Cancer Cells. 作为胰腺癌细胞线粒体 ATP 生成代谢抑制剂的 N-(1H-吲哚-6-基甲基)苯磺酰胺类似物的合成与生物学评价。
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-24 DOI: 10.1002/cmdc.202400536
Zachary C Brandeburg, Sakariyau A Waheed, Carina A Derewonko, Caroline E Dunn, Ethan C Pfeiffer, Ann Marie E Flusche, Robert J Sheaff, Angus A Lamar

A library of 26 indolyl sulfonamides and 12 amide and ester analogs based upon the 6-indolyl framework has been synthesized in an effort to target pancreatic cancer. The cytotoxicity of the indolyl sulfonamide compounds has been determined using a traditional (48-h compound exposure) assay against 7 pancreatic cancer cell lines and 1 non-cancerous cell line. The potential role of the compounds as metabolic inhibitors of ATP production was evaluated using a rapid screening (2-h compound exposure) assay developed within our laboratories. The IC50 values of the active compounds were determined using the rapid assay and six compounds displayed an IC50 value <5 μM against one or more pancreatic cancer cell lines. The ester analogs also display activity as potential metabolic inhibitors of ATP production with four of the six compounds displaying an IC50 value <5 μM against one or more pancreatic cancer cell lines.

我们合成了一个由 26 种吲哚基磺酰胺类化合物和 12 种基于 6-吲哚基框架的酰胺和酯类类似物组成的化合物库,旨在靶向治疗胰腺癌。吲哚基磺酰胺化合物的细胞毒性是通过传统的(48 小时化合物暴露)试验,针对 7 种胰腺癌细胞系和 1 种非癌细胞系进行测定的。我们还利用实验室开发的快速筛选(化合物暴露 2 小时)试验评估了这些化合物作为 ATP 生成代谢抑制剂的潜在作用。使用快速测定法确定了活性化合物的 IC50 值。
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引用次数: 0
We are MedChem: The Frontiers in Medicinal Chemistry 2024. 我们是 MedChem:2024 年药物化学前沿。
IF 3.6 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-23 DOI: 10.1002/cmdc.202400543
Matthias Schiedel, Philipp Barbie, Felix Pape, Marta Pinto, Andrea Unzue Lopez, María Méndez, Gerhard Hessler, Daniel Merk, Matthias Gehringer, Christina Lamers

The Frontiers in Medicinal Chemistry (FiMC) is the largest international Medicinal Chemistry conference in Germany and took place from March 17th to 20th 2024 in Munich. Co-organized by the Division of Medicinal Chemistry of the German Chemical Society (Gesellschaft Deutscher Chemiker; GDCh) and the Division of Pharmaceutical and Medicinal Chemistry of the German Pharmaceutical Society (Deutsche Pharmazeutische Gesellschaft; DPhG), and supported by a local organizing committee from the Ludwigs-Maximilians-University Munich headed by Daniel Merk, the meeting brought together approximately 225 participants from 20 countries. The outstanding program of the four-day conference included 40 lectures by leading scientists from industry and academia as well as early career investigators. Moreover, 100 posters were presented in two highly interactive poster sessions.

药物化学前沿会议(FiMC)是德国最大的国际药物化学会议,于 2024 年 3 月 17 日至 20 日在慕尼黑举行。本次会议由德国化学学会药物化学分会(Gesellschaft Deutscher Chemiker; GDCh)和德国药学会制药和药物化学分会(Deutsche Pharmazeutische Gesellschaft; DPhG)联合主办,并得到了以丹尼尔-默克(Daniel Merk)为首的慕尼黑路德维希-马克西米利安大学当地组委会的大力支持。在为期四天的会议中,来自工业界和学术界的顶尖科学家以及早期研究人员共举办了 40 场精彩讲座。此外,在两场互动性极强的海报展示会上还展出了 100 张海报。
{"title":"We are MedChem: The Frontiers in Medicinal Chemistry 2024.","authors":"Matthias Schiedel, Philipp Barbie, Felix Pape, Marta Pinto, Andrea Unzue Lopez, María Méndez, Gerhard Hessler, Daniel Merk, Matthias Gehringer, Christina Lamers","doi":"10.1002/cmdc.202400543","DOIUrl":"https://doi.org/10.1002/cmdc.202400543","url":null,"abstract":"<p><p>The Frontiers in Medicinal Chemistry (FiMC) is the largest international Medicinal Chemistry conference in Germany and took place from March 17<sup>th</sup> to 20<sup>th</sup> 2024 in Munich. Co-organized by the Division of Medicinal Chemistry of the German Chemical Society (Gesellschaft Deutscher Chemiker; GDCh) and the Division of Pharmaceutical and Medicinal Chemistry of the German Pharmaceutical Society (Deutsche Pharmazeutische Gesellschaft; DPhG), and supported by a local organizing committee from the Ludwigs-Maximilians-University Munich headed by Daniel Merk, the meeting brought together approximately 225 participants from 20 countries. The outstanding program of the four-day conference included 40 lectures by leading scientists from industry and academia as well as early career investigators. Moreover, 100 posters were presented in two highly interactive poster sessions.</p>","PeriodicalId":147,"journal":{"name":"ChemMedChem","volume":" ","pages":"e202400543"},"PeriodicalIF":3.6,"publicationDate":"2024-09-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142277555","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of a Radioiodinated G-quadruplex Binder in Cervical Cancer Models 在宫颈癌模型中评估放射性碘化 G-四联粘合剂
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-20 DOI: 10.1002/cmdc.202400438
António Paulo, Maria Cristina Oliveira, Maria Paula Cabral Campello, Lurdes Gano, Paula Raposinho, Ana Belchior, Edgar Mendes, Catarina D. Silva, Jéssica Lopes-Nunes, Carla Cruz
We herein describe the radiosynthesis of a 125I-labeled acridine orange derivative ([125I]-C8), acting as a G-quadruplex binder, and its biological evaluation in cervical cancer models, aiming to enlighten its potential as a radioligand for Auger Electron Radiopharmaceutical Therapy (AE-RPT) of cancer. [125I]-C8 was synthesized with a moderate radiochemical yield (ca. 60 %) by a [125I]iodo-destannylation reaction. Its evaluation in cervical cancer HeLa cells demonstrated that the radiocompound has a significant cellular internalization with a notorious accumulation in the cell nucleus. In line with these results, [125I]-C8 strongly compromised the viability of HeLa cells in a dose-dependent manner, inducing non-repairable DNA lesions that are most probably due to the AEs emitted by 125I in close proximity to the DNA. Biodistribution studies in a murine HeLa xenograft model showed that [125I]-C8 has fast blood clearance and high in vivo stability but poor tumor uptake, after systemic administration. The respective supramolecular conjugate with the AS1411 aptamer ([125I]-C8/AS1411) led to a slower blood clearance in the same animal tumor model, although without improving the tumor uptake. To take advantage of the radiotoxicity of [125I]-C8 against cervical cancer cells other strategies need to be studied, based namely on alternative nanodelivery carriers and/or intratumoral injection approaches.
我们在本文中描述了一种 125I 标记的吖啶橙衍生物([125I]-C8)的放射合成及其在宫颈癌模型中的生物学评估,旨在揭示其作为奥杰电子放射药物治疗(AE-RPT)癌症的放射性配体的潜力。[125I]-C8是通过[125I]碘-脱烷反应合成的,放射化学收率中等(约60%)。在宫颈癌 HeLa 细胞中对其进行的评估表明,这种放射性化合物具有明显的细胞内化作用,并在细胞核中蓄积。与这些结果一致,[125I]-C8 会以剂量依赖的方式严重损害 HeLa 细胞的活力,诱发不可修复的 DNA 损伤,这很可能是由于 125I 在 DNA 附近释放的 AE 所致。在小鼠 HeLa 异种移植模型中进行的生物分布研究表明,全身给药后,[125I]-C8 的血液清除速度快,体内稳定性高,但肿瘤摄取率低。在同一动物肿瘤模型中,[125I]-C8与AS1411适配体的超分子共轭物([125I]-C8/AS1411)的血液清除率较慢,但肿瘤摄取率没有改善。要利用[125I]-C8的放射毒性来对付宫颈癌细胞,还需要研究其他策略,即基于替代纳米给药载体和/或瘤内注射方法的策略。
{"title":"Evaluation of a Radioiodinated G-quadruplex Binder in Cervical Cancer Models","authors":"António Paulo, Maria Cristina Oliveira, Maria Paula Cabral Campello, Lurdes Gano, Paula Raposinho, Ana Belchior, Edgar Mendes, Catarina D. Silva, Jéssica Lopes-Nunes, Carla Cruz","doi":"10.1002/cmdc.202400438","DOIUrl":"https://doi.org/10.1002/cmdc.202400438","url":null,"abstract":"We herein describe the radiosynthesis of a 125I-labeled acridine orange derivative ([125I]-C8), acting as a G-quadruplex binder, and its biological evaluation in cervical cancer models, aiming to enlighten its potential as a radioligand for Auger Electron Radiopharmaceutical Therapy (AE-RPT) of cancer. [125I]-C8 was synthesized with a moderate radiochemical yield (ca. 60 %) by a [125I]iodo-destannylation reaction. Its evaluation in cervical cancer HeLa cells demonstrated that the radiocompound has a significant cellular internalization with a notorious accumulation in the cell nucleus. In line with these results, [125I]-C8 strongly compromised the viability of HeLa cells in a dose-dependent manner, inducing non-repairable DNA lesions that are most probably due to the AEs emitted by 125I in close proximity to the DNA. Biodistribution studies in a murine HeLa xenograft model showed that [125I]-C8 has fast blood clearance and high in vivo stability but poor tumor uptake, after systemic administration. The respective supramolecular conjugate with the AS1411 aptamer ([125I]-C8/AS1411) led to a slower blood clearance in the same animal tumor model, although without improving the tumor uptake. To take advantage of the radiotoxicity of [125I]-C8 against cervical cancer cells other strategies need to be studied, based namely on alternative nanodelivery carriers and/or intratumoral injection approaches.","PeriodicalId":147,"journal":{"name":"ChemMedChem","volume":"203 1","pages":""},"PeriodicalIF":3.4,"publicationDate":"2024-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142256292","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Exploring the Chemical Space of Mycobacterial Oxidative Phosphorylation Inhibitors Using Molecular Modeling 利用分子建模探索分枝杆菌氧化磷酸化抑制剂的化学空间
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-20 DOI: 10.1002/cmdc.202400303
Islam K. Matar, Zhongmin Dong, Chérif F. Matta
Intracellular pathogens are exceedingly clinically challenging, including pathogenic mycobacteria. Many global efforts are currently in action to battle these notorious disease agents. This review provides an overview of mycobacteria, along with their associated diseases, pathogenesis, and exploitable respiratory vulnerabilities to supplement contemporary antimycobacterial discovery.
细胞内病原体在临床上极具挑战性,其中包括致病分枝杆菌。目前,全球正在采取多项措施与这些臭名昭著的病原体作斗争。本综述概述了分枝杆菌及其相关疾病、致病机理和可利用的呼吸道弱点,以补充当代抗分枝杆菌发现的不足。
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引用次数: 0
Discovery of KW0113 as a First and Effective PROTAC Degrader of DNMT1 Protein 发现 KW0113 是首个有效的 DNMT1 蛋白 PROTAC 降解剂
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-20 DOI: 10.1002/cmdc.202400467
Huihui Wang, Zhaoliang Wang, Linghao Hu, Bingjie Yang, Liangyi Zong, Dounan Xu, Bo Yu, Xiangqian Kong, Mingliang Wang
DNA methyltransferase 1 (DNMT1) is an attractive therapeutic target for acute myelocytic leukemia (AML) and other malignancies. It has been reported that the genetic depletion of DNMT1 inhibited AML cell proliferation through reversing DNA methylation abnormalities. However, no DNMT1-targeted PROTAC degraders have been reported yet. Herein, a series of proteolysis-targeting chimera (PROTAC) degrader of DNMT1 based on dicyanopyridine scaffold and VHL E3 ubiquitin ligase ligand was developed. Among them, KW0113 (DC50 = 643/899 nM in MV4-11/MOLM-13 cells) exhibited optimal DNMT1 degradation. KW0113 induced DNMT1-selective degradation in a dose- and time-dependent manner through VHL engagement. Moreover, KW0113 inhibited AML cell growth by reversing promoter DNA hypermethylation and tumor-suppressor genes silencing. In conclusion, these findings proved the capability of PROTAC strategy for inducing DNMT1 degradation, demonstrated the therapeutic potential of DNMT1-targeted PROTACs. This work also provided a convenient chemical knockdown tool for DNMT1-related studies.
DNA 甲基转移酶 1(DNMT1)是治疗急性髓细胞白血病(AML)和其他恶性肿瘤的一个极具吸引力的靶点。据报道,通过逆转 DNA 甲基化异常,遗传性去掉 DNMT1 可抑制 AML 细胞增殖。然而,目前还没有关于 DNMT1 靶向 PROTAC 降解剂的报道。在此,我们开发了一系列基于双氰基吡啶支架和 VHL E3 泛素连接酶配体的 DNMT1 蛋白分解靶向嵌合体(PROTAC)降解剂。其中,KW0113(在 MV4-11/MOLM-13 细胞中的 DC50 = 643/899 nM)表现出最佳的 DNMT1 降解效果。KW0113 通过 VHL 参与,以剂量和时间依赖的方式诱导 DNMT1 选择性降解。此外,KW0113还能通过逆转启动子DNA高甲基化和肿瘤抑制基因沉默来抑制AML细胞的生长。总之,这些发现证明了 PROTAC 策略诱导 DNMT1 降解的能力,展示了 DNMT1 靶向 PROTACs 的治疗潜力。这项工作还为 DNMT1 相关研究提供了一种便捷的化学敲除工具。
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引用次数: 0
Crystallographic and Selectivity Studies on the Approved HIF Prolyl Hydroxylase Inhibitors Desidustat and Enarodustat 已获批准的 HIF 脯氨酰羟化酶抑制剂 Desidustat 和 Enarodustat 的晶体学和选择性研究
IF 3.4 4区 医学 Q2 CHEMISTRY, MEDICINAL Pub Date : 2024-09-18 DOI: 10.1002/cmdc.202400504
Thomas P. Corner, Eidarus Salah, Anthony Tumber, Samanpreet Kaur, Yu Nakashima, Mark D. Allen, Lara I. Schnaubelt, Giorgia Fiorini, Lennart Brewitz, Christopher Schofield
Prolyl hydroxylase domain‐containing proteins 1‐3 (PHD1‐3) are 2‐oxoglutarate (2OG)‐dependent oxygenases catalysing C‐4 hydroxylation of prolyl residues in α‐subunits of the heterodimeric transcription factor hypoxia‐inducible factor (HIF), modifications that promote HIF‐α degradation via the ubiquitin‐proteasome pathway. Pharmacological inhibition of the PHDs induces HIF‐α stabilisation, so promoting HIF target gene transcription. PHD inhibitors are used to treat anaemia caused by chronic kidney disease (CKD) due to their ability to stimulate erythropoietin (EPO) production. We report studies on the effects of the approved PHD inhibitors Desidustat and Enarodustat, and the clinical candidate TP0463518, on activities of a representative set of isolated recombinant human 2OG oxygenases. The three molecules manifest selectivity for PHD inhibition over that of the other 2OG oxygenases evaluated. We obtained crystal structures of Desidustat and Enarodustat in complex with the human 2OG oxygenase factor inhibiting hypoxia‐inducible factor‐α (FIH), which, together with modelling studies, inform on the binding modes of Desidustat and Enarodustat to active site Fe(II) in 2OG oxygenases, including PHD1‐3. The results will help in the design of selective inhibitors of both the PHDs and other 2OG oxygenases, which are of medicinal interest due to their involvement inter alia in metabolic regulation, epigenetic signalling, DNA‐damage repair, and agrochemical resistance.
含脯氨酰羟化酶结构域的蛋白 1-3(PHD1-3)是依赖于 2-氧代戊二酸(2OG)的氧合酶,可催化异源二聚体转录因子缺氧诱导因子(HIF)α 亚基中脯氨酰残基的 C-4 羟基化,这种修饰可促进 HIF-α 通过泛素-蛋白酶体途径降解。药理抑制 PHD 可诱导 HIF-α 稳定,从而促进 HIF 靶基因的转录。PHD 抑制剂能刺激促红细胞生成素(EPO)的产生,因此被用于治疗慢性肾病(CKD)引起的贫血症。我们报告了已获批准的 PHD 抑制剂 Desidustat 和 Enarodustat 以及临床候选药物 TP0463518 对一组有代表性的分离重组人 2OG 加氧酶活性的影响。这三种分子对 PHD 的抑制作用比对其他 2OG 加氧酶的抑制作用更具选择性。我们获得了德司达和依纳洛司达与人 2OG 加氧酶抑制低氧诱导因子-α(FIH)因子复合物的晶体结构,结合模型研究,这些结构说明了德司达和依纳洛司达与包括 PHD1-3 在内的 2OG 加氧酶活性位点铁(II)的结合模式。这些结果将有助于设计 PHDs 和其他 2OG 加氧酶的选择性抑制剂,由于这些酶参与新陈代谢调节、表观遗传信号、DNA 损伤修复和农用化学品抗性等,因此具有药用价值。
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引用次数: 0
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