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Noncatalytic Hydrolysis of Epoxidized Castor Oil: A Sustainable Route to Diol-Rich Polyols and Recyclable Polyboronates 环氧化蓖麻油的非催化水解:富二醇多元醇和可回收聚硼酸盐的可持续途径。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-26 DOI: 10.1002/cplu.202500592
Mateusz Gosecki, Monika Gosecka, Malgorzata Urbaniak, Rafal Dolot, Angelina Rosiak

The shift from fossil-based to biobased feedstocks is paramount for sustainable chemical production. This work presents an efficient, catalyst-free method for synthesizing a diol-rich polyol from epoxidized castor oil. Unlike conventional acid-catalyzed methods, the presented approach minimizes undesirable side reactions, yielding a polyol with a high hydroxyl number of 6.5 per triglyceride (370 mg KOH/g) and a low oligomer content. By performing the reaction at 130°C in an overheated water–dioxane mixture, we achieved full epoxide conversion in 24 h, making the process competitive with acid-catalyzed systems. This resulting polyol, characterized by a high content of adjacent diols, was utilized to prepare novel, recyclable polyboronates with 1,4-phenylenediboronic acid. Based on NMR analysis, the stoichiometry of the reaction between the synthesized polyol and phenylboronic acid was determined. Additionally, a regioselective preference for the formation of six-membered cyclic esters with 9,10,12-trihydroxyoctadecanoates, which constitute the main fraction in the synthesized polyol, was revealed. The polymers exhibit properties of low-cross-linking-density elastomers. The dynamic covalent nature of the boronate linkages was confirmed through DMTA and stress relaxation experiments. This research establishes hydroxylated castor oil as a robust and sustainable building block for polymer materials.

从化石基原料向生物基原料的转变对可持续化工生产至关重要。本文介绍了一种高效、无催化剂的蓖麻油环氧化合成富二醇多元醇的方法。与传统的酸催化方法不同,本文提出的方法最大限度地减少了不良副反应,产生的多元醇每甘油三酯(370 mg KOH/g)具有6.5个羟基,低聚物含量。通过在过热的水-二氧六烷混合物中在130°C下进行反应,我们在24小时内实现了全环氧化物转化,使该过程与酸催化系统相竞争。该多元醇具有邻二醇含量高的特点,用1,4-苯二硼酸制备了新型可回收的聚硼酸盐。通过核磁共振分析,确定了合成的多元醇与苯硼酸反应的化学计量学。此外,合成多元醇的主要组分9,10,12-三羟基十八酸酯对六元环酯的形成具有区域选择性偏好。该聚合物具有低交联密度弹性体的特性。通过DMTA和应力松弛实验证实了硼酸键的动态共价性质。本研究建立了羟基化蓖麻油作为一个强大的和可持续的构建块聚合物材料。
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引用次数: 0
A Combined Experimental and Theoretical Study of Chroman-6-ol α- and β-O-Glucosides: Dynamic Solution NMR, Solid-State NMR, Single-Crystal X-Ray Diffraction, and Density Functional Theory Calculations. 铬-6-醇α-和β- o -糖苷的实验与理论结合研究:动态溶液核磁共振、固态核磁共振、单晶x射线衍射和密度泛函理论计算。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-13 DOI: 10.1002/cplu.202500450
Piotr Wałejko, Łukasz Szeleszczuk, Aneta Baj, Aleksandra Klara Kowalska, Michał Ksawery Cyrański, Dariusz Maciej Pisklak

Naturally occurring chromanols, such as α-tocopherol (vitamin E), exhibit diverse biological activities. Their structural complexity, arising from the conformationally labile dihydropyran ring, has prompted extensive research into their conformational behavior. α-Tocopherol O-glycosides are promising vitamin E prodrug candidates, driving research on their synthesis and molecular dynamics (MD). In this work, four chromanyl glucosides were studied. Using crystallography, dynamic nuclear magnetic resonance (DNMR), solid-state NMR (ssNMR), and computational modeling (MD simulations, CASTEP), the conformational effects induced by sugar residues at the C6 position of a vitamin E model compound (2,2,5,7,8-pentamethylchroman-6-ol) in α- and β-orientations were investigated. Despite structural similarities, significant solid-state differences were observed, particularly between the anomers of peracetylated derivative 4, where the α-anomer displayed molecular disorder absent in the β-isomer - suggesting the presence of multiple conformational states in the crystal lattice. Density functional theory calculations confirmed insignificant energy differences (<0.5 kcal/mol) among the four optimized structures of chromanyl 2,3,4,6-tetra-O-acetyl-α-D-glucopyranoside (4α), implying that the coexisting configurations are stabilized by entropy. Gauge-including projector-augmented wave NMR calculations enabled precise ssNMR peak assignments, while MD simulations indicated static crystalline disorder in 4α. This integrated approach provided a detailed structural insight into chromanyl glucosides, advancing understanding of their conformational behavior.

天然存在的铬醇,如α-生育酚(维生素E),具有多种生物活性。由于构象不稳定的二氢吡喃环,它们结构的复杂性促使人们对它们的构象行为进行了广泛的研究。α-生育酚o -糖苷是很有前途的维生素E前药候选物,正在推动其合成和分子动力学(MD)的研究。本研究对四种铬酰糖苷进行了研究。利用晶体学、动态核磁共振(DNMR)、固体核磁共振(ssNMR)和计算模型(MD simulation, CASTEP)研究了维生素E模型化合物(2,2,5,7,8-五甲基铬-6-醇)C6位糖残基在α-和β-取向上的构象效应。尽管结构相似,但在固体形态上存在显著差异,特别是在过乙酰化衍生物4的异头物之间,α-异头物表现出分子无序,而β-异头物却没有,这表明在晶格中存在多种构象状态。密度泛函理论计算证实了微不足道的能量差异(
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引用次数: 0
Fe(III)-Anchored Porphyrin-Based Covalent Organic Framework as a Potent Catalyst for Biginelli Reaction Fe(III)-锚定卟啉基共价有机骨架作为Biginelli反应的有效催化剂。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-13 DOI: 10.1002/cplu.202500605
Shivani Bhagat, Pranjal Singh, Sushree S. Nayak, Sneha Wahurwagh, Umesh Pratap

Covalent organic frameworks (COFs), characterized by their tunable porosity and abundance of functional moieties, offer an exceptional scaffold for the uniform dispersion and stable immobilization of metal species. Herein, we report the efficient immobilization of highly dispersed Fe(III) ions into a porphyrin-functionalized COF (AP-COF), synthesized via Schiff-base condensation between 4,4′-(ethyne-1,2-diyl)dibenzaldehyde and 5,10,15,20-tetrakis(4-aminophenyl)-21H, 23H-porphyrin. The resulting Fe@AP-COF was characterized by various techniques. High-resolution transmission electron microscopy and dark field imaging confirmed the homogeneous distribution of Fe(III) ions within the COF matrix. The Fe@AP-COF demonstrated excellent thermal robustness and high surface area, which facilitated the effective anchoring of active iron centers. This catalyst exhibited remarkable performance in promoting the one-pot synthesis of dihydropyrimidinones (DHPMs) via Biginelli multicomponent reaction under optimum conditions. Furthermore, the Fe@AP-COF showed outstanding structural integrity, minimal Fe leaching, and excellent recyclability over multiple catalytic cycles. Comparative analysis revealed its superior catalytic activity to both homogeneous and conventional heterogeneous Fe-based catalysts. These insights highlight the valuable prospects of metal-functionalized porphyrin-based COFs as adaptable and efficient platforms for advanced catalytic applications.

共价有机框架(COFs)以其可调节的孔隙度和丰富的功能基团为特征,为金属物种的均匀分散和稳定固定提供了一种特殊的支架。在此,我们报道了高度分散的Fe(III)离子在卟啉功能化COF (AP-COF)上的高效固定化,该COF是通过4,4'-(乙炔-1,2-二基)二苯甲醛和5,10,15,20-四(4-氨基苯基)- 21h, 23h -卟啉之间的席夫碱缩合合成的。由此产生的Fe@AP-COF以各种技术为特征。高分辨率透射电镜和暗场成像证实了Fe(III)离子在COF基体中的均匀分布。Fe@AP-COF具有优异的热稳健性和高的比表面积,有利于有效锚定活性铁中心。该催化剂在最佳条件下通过Biginelli多组分反应一锅法合成双氢嘧啶类化合物(dhpm)。此外,Fe@AP-COF表现出出色的结构完整性,最小的铁浸出,以及在多个催化循环中优异的可回收性。对比分析表明,其催化活性优于均相和常规非均相铁基催化剂。这些见解突出了金属功能化卟啉基COFs作为先进催化应用的适应性和高效平台的宝贵前景。
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引用次数: 0
Recent Advances in Inorganic Oxide-Based Resistive Random Access Memory: Challenges and Strategies for Practical Applications 无机氧化物基阻性随机存取存储器的最新进展:挑战与实际应用策略。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-13 DOI: 10.1002/cplu.202500487
Anurag Pritam, Anwesha Mahapatra, Ritu Gupta, Shamiul Alam, Ahmedullah Aziz, Prakash Chandra Mondal

Memory is the backbone of modern computing systems, enabling efficient data storage and functionality. Among emerging nonvolatile memories, resistive random-access memory (RRAM) has garnered significant attention due to its fast switching speed, high scalability, low power consumption, and CMOS compatibility, which makes it suitable for neuromorphic architectures. RRAM operation relies on the history-dependent modulation of resistance in a dielectric layer in response to external stimuli. Recent developments have focused on the wide array of memory-active materials, particularly inorganic and organic compounds, each offering distinct operational modes, tunable switching characteristics, and pathways toward multilevel, low-power, and neuromorphic memory devices. This review summarizes the latest advances in oxide-based RRAM devices, a foundational platform that has driven critical breakthroughs from the initial memristor concept to modern filamentary switching mechanisms. It compares these developments with conventional memory technologies and discusses current challenges and future prospects. Furthermore, we highlight its emerging role in neuromorphic computing, underscoring its potential to revolutionize brain-inspired hardware.

内存是现代计算系统的支柱,能够实现高效的数据存储和功能。在新兴的非易失性存储器中,电阻式随机存取存储器(RRAM)因其快速的开关速度、高可扩展性、低功耗和CMOS兼容性而备受关注,这使得它适合于神经形态架构。RRAM操作依赖于电介质层中电阻的历史相关调制,以响应外部刺激。最近的发展集中在广泛的记忆活性材料上,特别是无机和有机化合物,每种材料都提供不同的工作模式,可调的开关特性,以及通向多层次,低功耗和神经形态记忆器件的途径。本文总结了基于氧化物的RRAM器件的最新进展,这是一个基础平台,从最初的忆阻器概念到现代丝状开关机制,它已经推动了关键的突破。将这些发展与传统存储技术进行了比较,并讨论了当前的挑战和未来的前景。此外,我们强调了它在神经形态计算中的新兴作用,强调了它革新大脑启发硬件的潜力。
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引用次数: 0
Quality Assessment of Box Materials for Long-Term Archival Storage: VOC Emissions Are Not a Significant Concern 长期档案储存包装盒材料的质量评估:挥发性有机化合物的排放不是一个重大问题。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-13 DOI: 10.1002/cplu.202500337
Randa Deraz, Fabiana Di Gianvincenzo, Katharina Schuhmann, Manfred Anders, Jasna Malešič, Irena Kralj Cigić, Abdelrazek Elnaggar, Matija Strlič

A potential impact of archival storage materials that seems to be of increased concern is the volatile organic compounds (VOCs) emitted from such materials. In this study, VOC emissions from cardboard and polypropylene were analyzed using thermal desorption gas chromatography–mass spectrometry (GC–MS) and ion chromatography (IC), with particular attention given to acetic and formic acids, and their impact was evaluated using Oddy tests. While the latter revealed that some nonarchival grade packaging materials could represent a risk to both metal and paper, which can be explained by VOC emissions measured using GC–MS, acid emissions measured at room temperature provided a different picture. Equilibrium acid concentration was modeled in archival boxes, which turned out to be insignificant in comparison with the current standards for archival air quality. This suggests that even nonarchival quality boxes do not significantly contribute to the degradation of paper, which emits its own VOCs, including organic acids. With suitable air exchange rates, the concern about box materials significantly contributing to VOC-induced degradation of paper stored within is thus not justified. Additionally, Oddy tests and other emission tests at elevated temperatures need to be re-evaluated in relation to their value to preventive conservation of organic materials.

档案储存材料的潜在影响似乎日益受到关注,这类材料散发的挥发性有机化合物(VOCs)。在这项研究中,使用热解吸气相色谱-质谱(GC-MS)和离子色谱(IC)分析了纸板和聚丙烯的VOC排放,特别关注了乙酸和甲酸,并使用Oddy测试评估了它们的影响。虽然后者揭示了一些非档案级包装材料可能对金属和纸张都有风险,这可以通过使用GC-MS测量的VOC排放量来解释,但在室温下测量的酸排放量提供了不同的情况。在档案箱中建立了平衡酸浓度模型,与现行档案空气质量标准相比,平衡酸浓度是微不足道的。这表明,即使是非档案质量的盒子也不会显著地导致纸张的降解,因为纸张会释放出自己的挥发性有机化合物,包括有机酸。在适当的空气交换率下,担心盒子材料会显著促进挥发性有机化合物引起的纸张降解是没有道理的。此外,需要重新评估Oddy试验和其他高温排放试验对有机材料预防性养护的价值。
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引用次数: 0
Synthesis of Trifluoromethylated Analogues of the Cyclic Lipopeptide Iturin A and Evaluation of their Antifungal Activity 环脂肽Iturin A三氟甲基化类似物的合成及其抗真菌活性评价。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-12 DOI: 10.1002/cplu.202500590
Periklis Karamanis, Matthew Kiernan, Jimmy Muldoon, Paul Evans, Cormac D. Murphy, Marina Rubini

The rise of antifungal resistance threatens public health and agriculture. Iturin A, a cyclic lipopeptide produced by Bacillus species, is known for its antifungal activity against various pathogens. In this study, three novel trifluoromethylated analogues of iturin A were synthesised as potential 19F NMR probes and to compare their bioactivity with the natural compound. Trifluoromethylation targeted the D-tyrosine and iturinic acid residues, which are critical for antifungal activity. Fluorinated building blocks were prepared via oxidative radical trifluoromethylation for D-tyrosine and, notably, via electrophilic trifluoromethylation combined with a chiral auxiliary-based approach for the iturinic acid, marking the first synthesis of a terminally trifluoromethylated long-chain β-amino fatty acid. Peptide assembly was achieved through solid-phase synthesis followed by on-resin cyclisation, alongside a high-yielding late-stage aromatic trifluoromethylation method. Bioactivity assays revealed that the mono-trifluoromethylated tyrosine analogue exhibited slight activity loss against Candida albicans and greater loss against Fusarium graminearum. The bis-trifluoromethylated tyrosine analogue lost activity against both fungi, while the alkyl-trifluoromethylated analogue retained full activity against C. albicans and showed a minor activity loss against F. graminearum. These analogues provide insights into site-specific trifluoromethylation effects, can serve as valuable 19F NMR probes, and can be a platform for further iturin A analogue development.

抗真菌药物耐药性的上升威胁着公众健康和农业。Iturin A是一种由芽孢杆菌产生的环状脂肽,具有抗真菌活性。在本研究中,合成了三种新的三氟甲基化iturin A类似物作为潜在的19F NMR探针,并将它们与天然化合物的生物活性进行了比较。三氟甲基化的目标是d -酪氨酸和尿酸残基,这是抗真菌活性的关键。通过氧化自由基三氟甲基化制备了d -酪氨酸,特别是通过亲电三氟甲基化结合手性助剂方法制备了iturinic酸,这标志着首次合成了末端三氟甲基化的长链β-氨基酸。肽组装是通过固相合成,然后是树脂环化,以及高产的晚期芳香三氟甲基化方法实现的。生物活性分析表明,单三氟甲基化酪氨酸类似物对白色念珠菌的活性略有下降,对谷物镰刀菌的活性下降较大。双三氟甲基化酪氨酸类似物对这两种真菌都失去了活性,而烷基三氟甲基化类似物对白色念珠菌保持了完全的活性,对谷草念珠菌的活性略有下降。这些类似物提供了对位点特异性三氟甲基化效应的见解,可以作为有价值的19F NMR探针,并且可以作为进一步开发iturin a类似物的平台。
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引用次数: 0
Front Cover: Cyanines Substituted on the Polymethine Chain: Synthesis, Resulting Properties, and Application Use Cases (ChemPlusChem 12/2025) 封面:聚甲基链上取代的菁氨酸:合成,所得性质和应用用例(ChemPlusChem 12/2025)
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-12 DOI: 10.1002/cplu.70091
Rebecca Strada, David Dunlop, Peter Šebej

Cyanines are versatile polymethine dyes used in imaging, sensing, and photonics. Functionalizing their polymethine chain is a powerful yet underexplored way to modulate their properties. This review covers recent advances in chain-substituted cyanines, from synthesis to applications, highlighting how substituents on their polymethine chain affect their spectroscopic properties. More information can be found in the Review by Peter Šebej, Rebecca Strada, and David Dunlop (DOI: 10.1002/cplu.202500279).

花青素是多用途的聚甲基染料,用于成像、传感和光子学。功能化它们的聚甲基链是一种强大但尚未开发的调节其性质的方法。本文综述了链取代菁从合成到应用的最新进展,重点介绍了聚甲基链上的取代基对其光谱性质的影响。更多信息可以在Peter Šebej, Rebecca Strada和David Dunlop (DOI: 10.1002/cplu.202500279)的评论中找到。
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引用次数: 0
Exploring RNA G-Quadruplex Stability in the Gas Phase: Insights from Native Mass Spectrometry 探索RNA g -四重体在气相中的稳定性:来自天然质谱的见解。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-10 DOI: 10.1002/cplu.202500679
Anna Ploner, Sarah Viola Heel, Kathrin Breuker

Native mass spectrometry (MS) of ribonucleic acids (RNA) is a developing technique for the study of RNA structure and interactions that can provide important information on binding stoichiometry and binding motifs. However, the stabilities of key structural elements of RNA, including G-quadruplex structures, during and after desolvation are not well understood. Efforts to improve our understanding of RNA structures in the gas phase are complicated by the fact that the most common technique for transferring RNA from solution to the gas phase, electrospray ionization (ESI), typically produces ions with a relatively wide distribution of net charges. Here, we have studied two tetramolecular RNA G-quadruplexes with very different stabilities in solution by native MS. For both K+ and +NH4 as central cations, we found that the ratio of quadruplex to monomer ions in the ESI spectra was higher for the RNA G-quadruplex that exhibited higher stability in solution, regardless of ion net charge. These data for native MS of RNA in negative ion mode contrast with data from native MS of proteins in positive ion mode, for which lower and higher net charge is often associated with folded and unfolded structures, respectively. We next probed the stabilities of the gaseous RNA G-quadruplex ions using collisionally activated dissociation (CAD). For quadruplex ions with K+ as central cations, we observed a steady decrease in stability with increasing net charge, consistent with Coulombic repulsion weakening the hydrogen bonding networks and the interactions between the central cations and the nucleobases forming the central channel of the quadruplex. Importantly, for quadruplex ions with the same net charge and for both K+ and +NH4 as central cations, the RNA G-quadruplex that exhibited higher stability in solution also demonstrated higher stability in the gas phase. Furthermore, we demonstrate that for quadruplexes with lower net charge and K+ as central cations, covalent bond cleavage occurs at lower energies available for dissociation than strand separation.

核糖核酸(RNA)的天然质谱(MS)是研究RNA结构和相互作用的一种新兴技术,可以提供结合化学计量学和结合基序的重要信息。然而,RNA的关键结构元件,包括g -四重结构,在脱溶过程中和脱溶后的稳定性尚不清楚。由于将RNA从溶液转移到气相的最常见技术——电喷雾电离(ESI)——通常会产生净电荷分布相对较宽的离子,因此提高我们对气相RNA结构的理解的努力变得复杂。在此,我们用天然质谱研究了两种在溶液中稳定性非常不同的四分子RNA g -四复体,对于K+和+NH4作为中心阳离子,我们发现,无论离子净电荷如何,在溶液中表现出更高稳定性的RNA g -四复体在ESI光谱中四复体与单体离子的比例更高。RNA在负离子模式下的天然质谱数据与蛋白质在正离子模式下的天然质谱数据形成对比,正离子模式下较低和较高的净电荷通常分别与折叠和未展开的结构相关。接下来,我们用碰撞激活解离(CAD)来探测气态RNA g -四重离子的稳定性。对于以K+为中心阳离子的四重离子,我们观察到随着净电荷的增加,稳定性稳步下降,这与库仑斥力削弱氢键网络以及中心阳离子与形成四重离子中心通道的核碱之间的相互作用一致。重要的是,对于净电荷相同的四重体离子,以及K+和+NH4作为中心阳离子,在溶液中表现出更高稳定性的RNA g -四重体在气相中也表现出更高的稳定性。此外,我们证明了具有较低净电荷和以K+为中心阳离子的四聚物,共价键劈裂发生在比链分离更低的解离能量下。
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引用次数: 0
Electron Paramagnetic Resonance Detection of Singlet Oxygen: Opportunities and Pitfalls of Sterically Hindered Amine Trapping Agents 单重态氧的电子顺磁共振检测:空间阻碍胺捕获剂的机会和缺陷。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-10 DOI: 10.1002/cplu.202500325
Chun-Yin Lau, Goutham Rangarajan, Rohit Pal, Ramin Farnood

Singlet oxygen (1O2), a nonradical reactive oxygen species, has shown great potential for driving redox reactions. Electron paramagnetic resonance (EPR) spectroscopy has become a widely utilized tool for identifying the adducts formed by 1O2 with sterically hindered amines and indirectly determining the concentrations of 1O2. However, the characteristic 1:1:1 triplet EPR signal of 1O2 adduct can arise from other molecules and impurities. In this work, we demonstrate the presence of N-oxyl impurities in commercial 2,2,6,6-tetramethylpiperidine (TEMP) derivatives can lead to overestimation of 1O2 in redox systems. Additionally, the relatively low water solubility of TEMP may cause underestimation of 1O2 in aqueous media, while more soluble 4-substituted derivatives (4-amino, 4-oxo, and 4-hydroxy TEMP) undergo untargeted oxidation, forming products besides their corresponding N-oxyl derivatives. This study proposes vacuum distillation of TEMP to minimize paramagnetic impurities and recommend the combined use of EPR and mass spectrometry (MS) for accurate identification of N-oxyl adducts, particularly for 4-substituted TEMP in aqueous media. Our findings on the solubility and oxidation behavior of TEMP derivatives provide an improved and robust detection and quantification strategy of singlet oxygen (1O2) in aqueous environment.

单线态氧(1O2)是一种非自由基的活性氧,在氧化还原反应中表现出很大的潜力。电子顺磁共振(EPR)光谱已成为一种广泛使用的工具,用于鉴定由1O2与位阻胺形成的加合物和间接测定1O2的浓度。然而,1O2加合物特有的1:1:1三重态EPR信号可能来自其他分子和杂质。在这项工作中,我们证明了在商业2,2,6,6-四甲基哌啶(TEMP)衍生物中n -氧杂质的存在会导致氧化还原系统中1O2的高估。此外,TEMP相对较低的水溶性可能会导致水介质中对1O2的低估,而更多可溶性的4-取代衍生物(4-氨基、4-氧和4-羟基TEMP)会发生非靶向氧化,形成与其对应的n -氧衍生物之外的产物。本研究建议真空蒸馏TEMP以减少顺磁杂质,并建议结合使用EPR和质谱(MS)来准确鉴定n -氧加合物,特别是在水介质中4-取代的TEMP。我们对TEMP衍生物的溶解度和氧化行为的研究结果为水环境中单线态氧(1O2)的检测和定量提供了一种改进和可靠的策略。
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引用次数: 0
Experimental and Theoretical Examination of DNA-Binding Properties of Ruthenium(II)–Hydrazine Complexes 钌(II)-肼配合物dna结合特性的实验和理论研究。
IF 2.8 4区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY Pub Date : 2025-12-10 DOI: 10.1002/cplu.202500399
Dušan Dimić, Aleksandra Rakić, Katarina Stojanović, Goran N. Kaluđerović, Jasmina Dimitrić Marković, Dejan Milenković

The DNA-binding properties of four RuII–hydrazine complexes [{RuCl(η6-p-cymene)}2(μ-Cl)(μ-L12N,N′)]Cl (1, L1: 3,4-dimethylphenylhydrazine) and [RuCl2(η6-p-cymene)(L1−3N)] complexes (2, L1; 3, L3: 3-chlorophenylhydrazine; 4, L3: 3-nitrophenylhydrazine) were explored through a combination of fluorescence spectroscopy, molecular docking, and Our own N-layered Integrated molecular Orbital and Molecular Mechanic (ONIOM)-based quantum mechanics/molecular mechanics (QM/MM) simulations. Ethidium bromide (EtBr) displacement assays revealed that all compounds interact with DNA, with calculated quenching constants (KSV) ranging from 2.44 to 4.79 × 104 M. The results led to the conclusion that all complexes interact with DNA with similar strength, although subtle differences were explained by the present structural groups and molecular electrostatic potential (MEP) maps. The presence of nitro and chloro substituents was important for the weak interactions with DNA, leading to partial removal of EtBr. Computational studies supported the experimental findings. Molecular docking confirmed minor groove binding for all four complexes, with favorable interaction geometries and binding energies. Complex 3 stood out, with the most negative docking score (ΔGbind = –38.2 kJ mol−1). The docking simulations with RNA, triplex DNA/RNA, and quadruplex DNA/RNA additionally proved that the size of the complex and the presence of substituents were determinants of selectivity. Further refinement using ONIOM-based QM/MM calculations yielded interaction energies with DNA that matched previous results, identifying compound 3 as the most stable DNA-binding species (ΔE = –532.7 kJ mol−1). The correlation between spectroscopic and theoretical results highlights the role of RuII-hydrazine ligand structure in modulating DNA affinity. Complex 3, bearing electron-donating hydrazine functionality and favorable spatial orientation, emerged as a promising candidate for further development in DNA-targeted therapies.

通过荧光光谱、分子对接、基于量子力学/分子力学(QM/MM)模拟等方法,研究了4种rui -肼配合物[{RuCl(η - 6-对伞花醚)}2(μ-Cl)(μ-L1-κ2N,N')]Cl (1,l1: 3,4-二甲基苯基肼)和[RuCl2(η - 6-对伞花醚)(L1-3-κN)]配合物(2,l1; 3,l3: 3-氯苯肼;4,l3: 3-硝基苯基肼)的dna结合特性。溴化乙啶(EtBr)置换实验表明,所有化合物与DNA相互作用,计算出的猝灭常数(KSV)范围为2.44 ~ 4.79 × 104 M。结果表明,所有复合物与DNA的相互作用强度相似,尽管目前的结构基团和分子静电势(MEP)图解释了细微的差异。硝基和氯取代基的存在对与DNA的弱相互作用很重要,导致EtBr的部分去除。计算研究支持了实验结果。分子对接证实了四种配合物的小凹槽结合,具有良好的相互作用几何形状和结合能。配合物3最为突出,负对接评分最高(ΔGbind = -38.2 kJ mol-1)。与RNA、三联体DNA/RNA和四联体DNA/RNA的对接模拟进一步证明了复合物的大小和取代基的存在是选择性的决定因素。进一步使用基于oniom的QM/MM计算得到与DNA的相互作用能与先前的结果相匹配,确定化合物3是最稳定的DNA结合物质(ΔE = -532.7 kJ mol-1)。光谱和理论结果之间的相关性突出了rui -肼配体结构在调节DNA亲和力方面的作用。配合物3具有供电子联氨功能和良好的空间取向,是进一步开发dna靶向治疗的有希望的候选者。
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