首页 > 最新文献

Journal of Biomedical Optics最新文献

英文 中文
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and experimental validation. 利用倾斜光纤探针漫反射光谱定量估算亚扩散体系中双层介质的光学特性,第 2 部分:探针设计、实现和实验验证。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-10-29 DOI: 10.1117/1.JBO.29.10.105002
Philippe De Tillieux, Maxime Baillot, Pierre Marquet

Significance: Tissues like skin have a layered structure where each layer's optical properties vary significantly. However, traditional diffuse reflectance spectroscopy assumes a homogeneous medium, often leading to estimations that reflects the properties of neither layer. There's a clear need for probes that can precisely measure the optical properties of layered tissues.

Aim: This paper aims to design a diffuse reflectance probe capable of accurately estimating the optical properties of bilayer tissues in the subdiffusive regime.

Approach: Using Monte Carlo simulations, we evaluated key geometric factors-fiber placement, tilt angle, diameter, and numerical aperture-on optical property estimation, following the methodology in Part I. A robust design is proposed that balances accurate intrinsic optical property (IOP) calculations with practical experimental constraints.

Results: The designed probe, featuring eight illumination and eight detection fibers with varying spacings and tilt angles. The estimation error of the IOP calculation for bilayer phantoms is less than 20% for top layers with thicknesses between 0.2 and 1.0 mm.

Conclusion: Building on the approach from Part I and using a precise calibration, the probe effectively quantified and distinguished the IOPs of bilayer samples, particularly those relevant to early skin pathology detection and characterization.

意义重大:皮肤等组织具有分层结构,每一层的光学特性都有很大差异。然而,传统的漫反射光谱法假定介质是均匀的,这往往导致估算结果不能反映任何一层的特性。目的:本文旨在设计一种漫反射探针,能够在亚扩散体系中准确估计双层组织的光学特性:利用蒙特卡罗模拟,我们按照第一部分的方法评估了关键几何因素--纤维位置、倾斜角度、直径和数值孔径--对光学特性估算的影响,并提出了一种稳健的设计,在精确的本征光学特性(IOP)计算与实际实验限制之间取得平衡:所设计的探针有八根照明光纤和八根检测光纤,其间距和倾斜角度各不相同。对于厚度在 0.2 至 1.0 毫米之间的顶层,双层模型的 IOP 计算估计误差小于 20%:基于第一部分的方法并使用精确的校准,该探头有效地量化和区分了双层样本的 IOP,尤其是与早期皮肤病理学检测和特征描述相关的样本。
{"title":"Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using tilted fiber-optic probe diffuse reflectance spectroscopy, part 2: probe design, realization, and experimental validation.","authors":"Philippe De Tillieux, Maxime Baillot, Pierre Marquet","doi":"10.1117/1.JBO.29.10.105002","DOIUrl":"https://doi.org/10.1117/1.JBO.29.10.105002","url":null,"abstract":"<p><strong>Significance: </strong>Tissues like skin have a layered structure where each layer's optical properties vary significantly. However, traditional diffuse reflectance spectroscopy assumes a homogeneous medium, often leading to estimations that reflects the properties of neither layer. There's a clear need for probes that can precisely measure the optical properties of layered tissues.</p><p><strong>Aim: </strong>This paper aims to design a diffuse reflectance probe capable of accurately estimating the optical properties of bilayer tissues in the subdiffusive regime.</p><p><strong>Approach: </strong>Using Monte Carlo simulations, we evaluated key geometric factors-fiber placement, tilt angle, diameter, and numerical aperture-on optical property estimation, following the methodology in Part I. A robust design is proposed that balances accurate intrinsic optical property (IOP) calculations with practical experimental constraints.</p><p><strong>Results: </strong>The designed probe, featuring eight illumination and eight detection fibers with varying spacings and tilt angles. The estimation error of the IOP calculation for bilayer phantoms is less than 20% for top layers with thicknesses between 0.2 and 1.0 mm.</p><p><strong>Conclusion: </strong>Building on the approach from Part I and using a precise calibration, the probe effectively quantified and distinguished the IOPs of bilayer samples, particularly those relevant to early skin pathology detection and characterization.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"105002"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11521147/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142545689","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dynamic multispectral NIR/SWIR for in vivo lymphovascular architectural and functional quantification. 用于体内淋巴管结构和功能量化的动态多光谱近红外/西红外技术。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-09-26 DOI: 10.1117/1.JBO.29.10.106001
Christopher Hansen, Jaidip Jagtap, Abdul Parchur, Gayatri Sharma, Shayan Shafiee, Sayantan Sinha, Heather Himburg, Amit Joshi

Significance: Although the lymphatic system is the second largest circulatory system in the body, there are limited techniques available for characterizing lymphatic vessel function. We report shortwave-infrared (SWIR) imaging for minimally invasive in vivo quantification of lymphatic circulation with superior contrast and resolution compared with near-infrared first window imaging.

Aim: We aim to study the lymphatic structure and function in vivo via SWIR fluorescence imaging.

Approach: We evaluated subsurface lymphatic circulation in healthy, adult immunocompromised salt-sensitive Sprague-Dawley rats using two fluorescence imaging modalities: near-infrared first window (NIR-I, 700 to 900 nm) and SWIR (900 to 1800 nm) imaging. We also compared two fluorescent imaging probes: indocyanine green (ICG) and silver sulfide quantum dots (QDs) as SWIR lymphatic contrast agents following intradermal footpad delivery in these rats.

Results: SWIR imaging exhibits reduced scattering and autofluorescence background relative to NIR-I imaging. SWIR imaging with ICG provides 1.7 times better resolution and sensitivity than NIR-I, and SWIR imaging with QDs provides nearly two times better resolution and sensitivity with enhanced vessel distinguishability. SWIR images thus provide a more accurate estimation of in vivo vessel size than conventional NIR-I images.

Conclusions: SWIR imaging of silver sulfide QDs into the intradermal footpad injection provides superior image resolution compared with conventional imaging techniques using NIR-I imaging with ICG dye.

意义重大:虽然淋巴系统是人体的第二大循环系统,但用于描述淋巴管功能的技术却很有限。与近红外第一窗口成像相比,短波-红外(SWIR)成像具有更高的对比度和分辨率,可用于体内淋巴循环的微创量化:我们使用两种荧光成像模式:近红外第一窗口(NIR-I,700 到 900 nm)和西南红外(900 到 1800 nm)成像,评估了健康的成年免疫受损盐敏感 Sprague-Dawley 大鼠的体表下淋巴循环。我们还比较了两种荧光成像探针:吲哚菁绿(ICG)和硫化银量子点(QDs)作为 SWIR 淋巴造影剂在大鼠足垫皮内给药后的成像效果:结果:与近红外成像相比,SWIR成像可减少散射和自发荧光背景。使用 ICG 进行的 SWIR 成像的分辨率和灵敏度比 NIR-I 高 1.7 倍,使用 QDs 进行的 SWIR 成像的分辨率和灵敏度比 NIR-I 高近 2 倍,同时还能提高血管的可分辨性。因此,与传统的近红外成像相比,SWIR 图像能更准确地估计体内血管的大小:结论:与使用 ICG 染料进行近红外成像的传统成像技术相比,硫化银 QDs 皮下足垫注射的 SWIR 成像具有更高的图像分辨率。
{"title":"Dynamic multispectral NIR/SWIR for <i>in vivo</i> lymphovascular architectural and functional quantification.","authors":"Christopher Hansen, Jaidip Jagtap, Abdul Parchur, Gayatri Sharma, Shayan Shafiee, Sayantan Sinha, Heather Himburg, Amit Joshi","doi":"10.1117/1.JBO.29.10.106001","DOIUrl":"https://doi.org/10.1117/1.JBO.29.10.106001","url":null,"abstract":"<p><strong>Significance: </strong>Although the lymphatic system is the second largest circulatory system in the body, there are limited techniques available for characterizing lymphatic vessel function. We report shortwave-infrared (SWIR) imaging for minimally invasive <i>in vivo</i> quantification of lymphatic circulation with superior contrast and resolution compared with near-infrared first window imaging.</p><p><strong>Aim: </strong>We aim to study the lymphatic structure and function <i>in vivo</i> via SWIR fluorescence imaging.</p><p><strong>Approach: </strong>We evaluated subsurface lymphatic circulation in healthy, adult immunocompromised salt-sensitive Sprague-Dawley rats using two fluorescence imaging modalities: near-infrared first window (NIR-I, 700 to 900 nm) and SWIR (900 to 1800 nm) imaging. We also compared two fluorescent imaging probes: indocyanine green (ICG) and silver sulfide quantum dots (QDs) as SWIR lymphatic contrast agents following intradermal footpad delivery in these rats.</p><p><strong>Results: </strong>SWIR imaging exhibits reduced scattering and autofluorescence background relative to NIR-I imaging. SWIR imaging with ICG provides 1.7 times better resolution and sensitivity than NIR-I, and SWIR imaging with QDs provides nearly two times better resolution and sensitivity with enhanced vessel distinguishability. SWIR images thus provide a more accurate estimation of <i>in vivo</i> vessel size than conventional NIR-I images.</p><p><strong>Conclusions: </strong>SWIR imaging of silver sulfide QDs into the intradermal footpad injection provides superior image resolution compared with conventional imaging techniques using NIR-I imaging with ICG dye.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"106001"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11425400/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142347404","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Mueller matrix analysis of a biologically sourced engineered tissue construct as polarimetric phantom. 对作为偏振模型的生物来源工程组织结构进行穆勒矩阵分析。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-10-29 DOI: 10.1117/1.JBO.29.10.106002
Zixi Lin, Samantha Madnick, Joshua A Burrow, Jeffrey R Morgan, Kimani C Toussaint

Significance: The polarimetric properties of biological tissues are often difficult to ascertain independent of their complex structural and organizational features. Conventional polarimetric tissue phantoms have well-characterized optical properties but are overly simplified. We demonstrate that an innovative, biologically sourced, engineered tissue construct better recapitulates the desired structural and polarimetric properties of native collagenous tissues, with the added benefit of potential tunability of the polarimetric response. We bridge the gap between non-biological polarimetric phantoms and native tissues.

Aim: We aim to evaluate a synthesized tissue construct for its effectiveness as a phantom that mimics the polarimetric properties in typical collagenous tissues.

Approach: We use a fibroblast-derived, ring-shaped engineered tissue construct as an innovative tissue phantom for polarimetric imaging. We perform polarimetry measurements and subsequent analysis using the Mueller matrix decomposition and Mueller matrix transformation methods. Scalar polarimetric parameters of the engineered tissue are analyzed at different time points for both a control group and for those treated with the transforming growth factor ( TGF ) - β 1 . Second-harmonic generation (SHG) imaging and three-dimensional collagen fiber organization analysis are also applied.

Results: We identify linear retardance and circular depolarization as the parameters that are most sensitive to the tissue culture time and the addition of TGF - β 1 . Aside from a statistically significant increase over time, the behavior of linear retardance and circular depolarization indicates that the addition of TGF - β 1 accelerates the growth of the engineered tissue, which is consistent with expectations. We also find through SHG images that collagen fiber organization becomes more aligned over time but is not susceptible to the addition of TGF - β 1 .

Conclusions: The engineered tissue construct exhibits changes in polarimetric properties, especially linear retardance and circular depolarization, over culture time and under TGF - β 1 treatments. This tissue construct has the potential to act as a controlled modular optical phantom for polarimetric-based methods.

意义重大:生物组织的偏振特性往往难以确定,这与其复杂的结构和组织特征无关。传统的偏振组织模型具有良好的光学特性,但过于简化。我们证明,一种创新的生物来源工程组织结构能更好地再现原生胶原组织所需的结构和偏振特性,并具有偏振响应潜在可调性的额外优势。我们在非生物极谱模型和原生组织之间架起了一座桥梁。目的:我们旨在评估合成组织构建物作为模拟典型胶原组织极谱特性的模型的有效性:方法:我们使用一种源自成纤维细胞的环形工程组织结构作为创新的组织模型,用于极坐标成像。我们使用穆勒矩阵分解法和穆勒矩阵变换法进行极坐标测量和后续分析。在不同的时间点分析了对照组和使用转化生长因子(TGF)- β 1 处理的工程组织的标量极坐标参数。此外,还应用了二次谐波发生(SHG)成像和三维胶原纤维组织分析:我们发现线性延迟和环形去极化是对组织培养时间和添加 TGF - β 1 最敏感的参数。除了线性延迟和环形去极化随着时间的推移在统计学上有明显增加外,其行为表明添加 TGF - β 1 会加速工程组织的生长,这与预期一致。我们还通过 SHG 图像发现,随着时间的推移,胶原纤维组织变得更加整齐,但并不受添加 TGF - β 1 的影响:随着培养时间的推移和在 TGF - β 1 处理下,工程组织构建物的极性发生了变化,特别是线性延迟和环形去极化。这种组织结构有可能成为基于偏振测量方法的受控模块化光学模型。
{"title":"Mueller matrix analysis of a biologically sourced engineered tissue construct as polarimetric phantom.","authors":"Zixi Lin, Samantha Madnick, Joshua A Burrow, Jeffrey R Morgan, Kimani C Toussaint","doi":"10.1117/1.JBO.29.10.106002","DOIUrl":"https://doi.org/10.1117/1.JBO.29.10.106002","url":null,"abstract":"<p><strong>Significance: </strong>The polarimetric properties of biological tissues are often difficult to ascertain independent of their complex structural and organizational features. Conventional polarimetric tissue phantoms have well-characterized optical properties but are overly simplified. We demonstrate that an innovative, biologically sourced, engineered tissue construct better recapitulates the desired structural and polarimetric properties of native collagenous tissues, with the added benefit of potential tunability of the polarimetric response. We bridge the gap between non-biological polarimetric phantoms and native tissues.</p><p><strong>Aim: </strong>We aim to evaluate a synthesized tissue construct for its effectiveness as a phantom that mimics the polarimetric properties in typical collagenous tissues.</p><p><strong>Approach: </strong>We use a fibroblast-derived, ring-shaped engineered tissue construct as an innovative tissue phantom for polarimetric imaging. We perform polarimetry measurements and subsequent analysis using the Mueller matrix decomposition and Mueller matrix transformation methods. Scalar polarimetric parameters of the engineered tissue are analyzed at different time points for both a control group and for those treated with the transforming growth factor <math><mrow><mo>(</mo> <mi>TGF</mi> <mo>)</mo> <mtext>-</mtext> <mi>β</mi> <mn>1</mn></mrow> </math> . Second-harmonic generation (SHG) imaging and three-dimensional collagen fiber organization analysis are also applied.</p><p><strong>Results: </strong>We identify linear retardance and circular depolarization as the parameters that are most sensitive to the tissue culture time and the addition of <math><mrow><mi>TGF</mi> <mtext>-</mtext> <mi>β</mi> <mn>1</mn></mrow> </math> . Aside from a statistically significant increase over time, the behavior of linear retardance and circular depolarization indicates that the addition of <math><mrow><mi>TGF</mi> <mtext>-</mtext> <mi>β</mi> <mn>1</mn></mrow> </math> accelerates the growth of the engineered tissue, which is consistent with expectations. We also find through SHG images that collagen fiber organization becomes more aligned over time but is not susceptible to the addition of <math><mrow><mi>TGF</mi> <mtext>-</mtext> <mi>β</mi> <mn>1</mn></mrow> </math> .</p><p><strong>Conclusions: </strong>The engineered tissue construct exhibits changes in polarimetric properties, especially linear retardance and circular depolarization, over culture time and under <math><mrow><mi>TGF</mi> <mtext>-</mtext> <mi>β</mi> <mn>1</mn></mrow> </math> treatments. This tissue construct has the potential to act as a controlled modular optical phantom for polarimetric-based methods.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"106002"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11521148/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142545687","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for designing probe geometry. 在漫反射光谱学中使用倾斜光纤探针对亚扩散体系中双层介质的光学特性进行定量估算,第 1 部分:设计探针几何形状的理论框架。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-10-29 DOI: 10.1117/1.JBO.29.10.105001
Philippe De Tillieux, Maxime Baillot, Pierre Marquet

Significance: As biological tissues are highly heterogeneous, there is a great interest in developing non-invasive optical approaches capable of characterizing them in a very localized manner. Obtaining accurate absolute values of the local optical properties from the measured reflectance requires finding a probe geometry, which allows us to solve this inverse problem robustly and reliably despite neglecting the higher-order moments of the scattering phase function.

Aim: Our goal is to develop a theoretical framework for designing tilted-fiber diffuse reflectance probes that allow quantitative estimation of the optical properties corresponding to limited tissue volume (typically a few cubic millimeters).

Approach: Relationships among probe geometry, sampled tissue volume, and robustness of the inverse solver to calculate optical properties from reflectance are studied using Monte Carlo simulations.

Results: The analysis of the number of scattering events of the collected photons leads to the establishment of relationships among the probe geometry, the sampled tissue volume, and the validity of a subdiffusive regime for the reflectance.

Conclusions: A methodology is proposed for the design of new compact probes with tilted fiber geometry that can quantitatively estimate the values of the optical coefficients in a localized manner within living biological tissues by recording diffuse reflectance spectra.

意义重大:由于生物组织具有高度异质性,因此人们对开发能够以非常局部的方式描述生物组织特征的非侵入式光学方法非常感兴趣。要从测量到的反射率中获得准确的局部光学特性绝对值,需要找到一种探针几何形状,它能让我们在忽略散射相位函数的高阶矩的情况下,稳健可靠地解决这个逆问题。目标:我们的目标是建立一个理论框架,用于设计倾斜纤维漫反射探针,以便定量估计与有限组织体积(通常为几立方毫米)相对应的光学特性:方法:利用蒙特卡洛模拟法研究探头几何形状、采样组织体积以及通过反射率计算光学特性的逆求解器的稳健性之间的关系:结果:通过分析所收集光子的散射事件数量,确定了探头几何形状、取样组织体积和反射率亚扩散机制的有效性之间的关系:结论:本文提出了一种方法,用于设计具有倾斜光纤几何形状的新型紧凑探头,该探头可通过记录漫反射光谱,以局部方式定量估算活体生物组织内的光学系数值。
{"title":"Quantitative estimation of optical properties in bilayer media within the subdiffusive regime using a tilted fiber-optic probe in diffuse reflectance spectroscopy, part 1: a theoretical framework for designing probe geometry.","authors":"Philippe De Tillieux, Maxime Baillot, Pierre Marquet","doi":"10.1117/1.JBO.29.10.105001","DOIUrl":"https://doi.org/10.1117/1.JBO.29.10.105001","url":null,"abstract":"<p><strong>Significance: </strong>As biological tissues are highly heterogeneous, there is a great interest in developing non-invasive optical approaches capable of characterizing them in a very localized manner. Obtaining accurate absolute values of the local optical properties from the measured reflectance requires finding a probe geometry, which allows us to solve this inverse problem robustly and reliably despite neglecting the higher-order moments of the scattering phase function.</p><p><strong>Aim: </strong>Our goal is to develop a theoretical framework for designing tilted-fiber diffuse reflectance probes that allow quantitative estimation of the optical properties corresponding to limited tissue volume (typically a few cubic millimeters).</p><p><strong>Approach: </strong>Relationships among probe geometry, sampled tissue volume, and robustness of the inverse solver to calculate optical properties from reflectance are studied using Monte Carlo simulations.</p><p><strong>Results: </strong>The analysis of the number of scattering events of the collected photons leads to the establishment of relationships among the probe geometry, the sampled tissue volume, and the validity of a subdiffusive regime for the reflectance.</p><p><strong>Conclusions: </strong>A methodology is proposed for the design of new compact probes with tilted fiber geometry that can quantitatively estimate the values of the optical coefficients in a localized manner within living biological tissues by recording diffuse reflectance spectra.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"105001"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11521146/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142545688","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Accuracy enhancement of metabolic index-based blood glucose estimation with a screening process for low-quality data. 通过筛选低质量数据,提高基于代谢指数的血糖估算的准确性。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-10-25 DOI: 10.1117/1.JBO.29.10.107001
Tomoya Nakazawa, Keiji Morishita, Anna Ienaka, Takeo Fujii, Masaki Ito, Fumie Matsushita

Significance: Many researchers have proposed various non-invasive glucose monitoring (NIGM) approaches using wearable or portable devices. However, due to the limited capacity of detectors for such compact devices and the movement of the body during measurement, the precision of the acquired data frequently diminishes, which can cause problems during actual use in daily life. In addition, intensive smoothing is often used in post-processing to mitigate the effects of erroneous values. However, this requires a considerable amount of data and results in a delay in the response to the actual blood glucose level (BGL).

Aim: Instead of just applying data smoothing in the post-process of the data acquisition, we propose an active low-quality data screening method in the pre-process. In the proposal phase of the screening process, we employ an analytical approach to examine and formulate factors that might affect the BGL estimation accuracy.

Approach: A signal quality index inspired by the standard deviation concept is introduced to detect visually apparent noise on signals. Furthermore, the total estimation error in the metabolic index (MI) is calculated based on potential perturbations defined by the signal-to-noise ratio (SNR) and the uncertainty due to discrete sampling. Thereafter, the acquired data were screened by these quality indices.

Results: By applying the proposed data screening process to the data obtained from a commercially available smartwatch device in the pre-process, the estimation accuracy of the MI-based BGL was improved significantly.

Conclusions: Adopting the proposed screen process improves BGL estimation accuracy in the smartwatch-based prototype. Applying the proposed screen process will facilitate the integration of wearable and continuous BGL monitoring into size- and SNR-limited devices such as smartwatches and smart rings.

意义重大:许多研究人员提出了各种使用可穿戴或便携式设备的无创葡萄糖监测(NIGM)方法。然而,由于这种小巧设备的探测器容量有限,而且在测量过程中身体会移动,因此获取数据的精度经常会降低,这可能会在日常生活的实际使用中造成问题。此外,在后期处理过程中,通常会使用强化平滑处理来减轻错误值的影响。目的:我们提出了一种在前处理过程中主动筛选低质量数据的方法,而不是仅仅在数据采集的后处理中应用数据平滑。在筛选过程的建议阶段,我们采用一种分析方法来研究和制定可能影响血糖估计准确性的因素:方法:受标准偏差概念的启发,我们引入了一个信号质量指标,用于检测视觉上明显的信号噪声。此外,根据信噪比(SNR)定义的潜在扰动和离散采样导致的不确定性,计算出代谢指数(MI)的总估计误差。之后,根据这些质量指数对获取的数据进行筛选:通过在预处理中对从市售智能手表设备获取的数据应用所提出的数据筛选流程,基于 MI 的 BGL 估算精度得到了显著提高:结论:在基于智能手表的原型中,采用建议的筛选流程提高了 BGL 估算的准确性。应用所提出的屏幕流程将有助于将可穿戴和连续 BGL 监测集成到智能手表和智能手环等受尺寸和信噪比限制的设备中。
{"title":"Accuracy enhancement of metabolic index-based blood glucose estimation with a screening process for low-quality data.","authors":"Tomoya Nakazawa, Keiji Morishita, Anna Ienaka, Takeo Fujii, Masaki Ito, Fumie Matsushita","doi":"10.1117/1.JBO.29.10.107001","DOIUrl":"10.1117/1.JBO.29.10.107001","url":null,"abstract":"<p><strong>Significance: </strong>Many researchers have proposed various non-invasive glucose monitoring (NIGM) approaches using wearable or portable devices. However, due to the limited capacity of detectors for such compact devices and the movement of the body during measurement, the precision of the acquired data frequently diminishes, which can cause problems during actual use in daily life. In addition, intensive smoothing is often used in post-processing to mitigate the effects of erroneous values. However, this requires a considerable amount of data and results in a delay in the response to the actual blood glucose level (BGL).</p><p><strong>Aim: </strong>Instead of just applying data smoothing in the post-process of the data acquisition, we propose an active low-quality data screening method in the pre-process. In the proposal phase of the screening process, we employ an analytical approach to examine and formulate factors that might affect the BGL estimation accuracy.</p><p><strong>Approach: </strong>A signal quality index inspired by the standard deviation concept is introduced to detect visually apparent noise on signals. Furthermore, the total estimation error in the metabolic index (MI) is calculated based on potential perturbations defined by the signal-to-noise ratio (SNR) and the uncertainty due to discrete sampling. Thereafter, the acquired data were screened by these quality indices.</p><p><strong>Results: </strong>By applying the proposed data screening process to the data obtained from a commercially available smartwatch device in the pre-process, the estimation accuracy of the MI-based BGL was improved significantly.</p><p><strong>Conclusions: </strong>Adopting the proposed screen process improves BGL estimation accuracy in the smartwatch-based prototype. Applying the proposed screen process will facilitate the integration of wearable and continuous BGL monitoring into size- and SNR-limited devices such as smartwatches and smart rings.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"107001"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11503645/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142501143","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
High-resolution lensless holographic microscopy using a physics-aware deep network. 使用物理感知深度网络的高分辨率无透镜全息显微镜。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-10-08 DOI: 10.1117/1.JBO.29.10.106502
Ashwini S Galande, Vikas Thapa, Aswathy Vijay, Renu John

Significance: Lensless digital inline holographic microscopy (LDIHM) is an emerging quantitative phase imaging modality that uses advanced computational methods for phase retrieval from the interference pattern. The existing end-to-end deep networks require a large training dataset with sufficient diversity to achieve high-fidelity hologram reconstruction. To mitigate this data requirement problem, physics-aware deep networks integrate the physics of holography in the loss function to reconstruct complex objects without needing prior training. However, the data fidelity term measures the data consistency with a single low-resolution hologram without any external regularization, which results in a low performance on complex biological data.

Aim: We aim to mitigate the challenges with trained and physics-aware untrained deep networks separately and combine the benefits of both methods for high-resolution phase recovery from a single low-resolution hologram in LDIHM.

Approach: We propose a hybrid deep framework (HDPhysNet) using a plug-and-play method that blends the benefits of trained and untrained deep models for phase recovery in LDIHM. The high-resolution phase is generated by a pre-trained high-definition generative adversarial network (HDGAN) from a single low-resolution hologram. The generated phase is then plugged into the loss function of a physics-aware untrained deep network to regulate the complex object reconstruction process.

Results: Simulation results show that the SSIM of the proposed method is increased by 0.07 over the trained and 0.04 over the untrained deep networks. The average phase-SNR is elevated by 8.2 dB over trained deep models and 9.8 dB over untrained deep networks on the experimental biological cells (cervical cells and red blood cells).

Conclusions: We showed improved performance of the HDPhysNet against the unknown perturbation in the imaging parameters such as the propagation distance, the wavelength of the illuminating source, and the imaging sample compared with the trained network (HDGAN). LDIHM, combined with HDPhysNet, is a portable and technology-driven microscopy best suited for point-of-care cytology applications.

意义重大:无透镜数字内联全息显微镜(LDIHM)是一种新兴的定量相位成像模式,它使用先进的计算方法从干涉图案中进行相位检索。现有的端到端深度网络需要具有足够多样性的大型训练数据集,才能实现高保真全息图重建。为缓解这一数据要求问题,物理感知深度网络在损失函数中集成了全息物理学,无需事先训练即可重建复杂对象。然而,数据保真度项衡量的是数据与单一低分辨率全息图的一致性,而没有任何外部正则化,这导致在复杂生物数据上的性能较低。Aim: We aim to mitigate the challenges with trained and physics-aware untrained deep networks separately and combine the benefits of both methods for high-resolution phase recovery from a single low-resolution hologram in LDIHM.Approach.We提出了混合深度框架(Hybrid deep framework, HDIHM):我们提出了一种混合深度框架(HDPhysNet),该框架采用即插即用的方法,将经过训练和未经训练的深度模型的优势结合起来,用于 LDIHM 中的相位恢复。高分辨率相位由预先训练好的高清生成对抗网络(HDGAN)从单张低分辨率全息图生成。然后将生成的相位插入物理感知的未训练深度网络的损失函数中,以调节复杂的物体重建过程:仿真结果表明,建议方法的 SSIM 比训练过的深度网络提高了 0.07,比未训练过的深度网络提高了 0.04。在实验生物细胞(宫颈细胞和红细胞)上,平均相位-SNR 比经过训练的深度模型提高了 8.2 dB,比未经训练的深度网络提高了 9.8 dB:与训练有素的网络(HDGAN)相比,我们发现 HDPhysNet 在面对成像参数(如传播距离、光源波长和成像样本)的未知扰动时性能有所提高。LDIHM 与 HDPhysNet 相结合,是一种便携式、技术驱动型显微镜,最适合用于护理点细胞学应用。
{"title":"High-resolution lensless holographic microscopy using a physics-aware deep network.","authors":"Ashwini S Galande, Vikas Thapa, Aswathy Vijay, Renu John","doi":"10.1117/1.JBO.29.10.106502","DOIUrl":"https://doi.org/10.1117/1.JBO.29.10.106502","url":null,"abstract":"<p><strong>Significance: </strong>Lensless digital inline holographic microscopy (LDIHM) is an emerging quantitative phase imaging modality that uses advanced computational methods for phase retrieval from the interference pattern. The existing end-to-end deep networks require a large training dataset with sufficient diversity to achieve high-fidelity hologram reconstruction. To mitigate this data requirement problem, physics-aware deep networks integrate the physics of holography in the loss function to reconstruct complex objects without needing prior training. However, the data fidelity term measures the data consistency with a single low-resolution hologram without any external regularization, which results in a low performance on complex biological data.</p><p><strong>Aim: </strong>We aim to mitigate the challenges with trained and physics-aware untrained deep networks separately and combine the benefits of both methods for high-resolution phase recovery from a single low-resolution hologram in LDIHM.</p><p><strong>Approach: </strong>We propose a hybrid deep framework (HDPhysNet) using a plug-and-play method that blends the benefits of trained and untrained deep models for phase recovery in LDIHM. The high-resolution phase is generated by a pre-trained high-definition generative adversarial network (HDGAN) from a single low-resolution hologram. The generated phase is then plugged into the loss function of a physics-aware untrained deep network to regulate the complex object reconstruction process.</p><p><strong>Results: </strong>Simulation results show that the SSIM of the proposed method is increased by 0.07 over the trained and 0.04 over the untrained deep networks. The average phase-SNR is elevated by 8.2 dB over trained deep models and 9.8 dB over untrained deep networks on the experimental biological cells (cervical cells and red blood cells).</p><p><strong>Conclusions: </strong>We showed improved performance of the HDPhysNet against the unknown perturbation in the imaging parameters such as the propagation distance, the wavelength of the illuminating source, and the imaging sample compared with the trained network (HDGAN). LDIHM, combined with HDPhysNet, is a portable and technology-driven microscopy best suited for point-of-care cytology applications.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"106502"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11460617/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142390835","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Simultaneous assessment of NAD(P)H and flavins with multispectral fluorescence lifetime imaging microscopy at a single excitation wavelength of 750 nm. 在 750 纳米单一激发波长下利用多光谱荧光寿命成像显微镜同时评估 NAD(P)H 和黄素。
IF 3 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-10-01 Epub Date: 2024-09-30 DOI: 10.1117/1.JBO.29.10.106501
Boris Yakimov, Anastasia Komarova, Elena Nikonova, Artem Mozherov, Liubov Shimolina, Marina Shirmanova, Wolfgang Becker, Evgeny Shirshin, Vladislav Shcheslavskiy

Significance: Autofluorescence characteristics of the reduced nicotinamide adenine dinucleotide and oxidized flavin cofactors are important for the evaluation of the metabolic status of the cells. The approaches that involve a detailed analysis of both spectral and time characteristics of the autofluorescence signals may provide additional insights into the biochemical processes in the cells and biological tissues and facilitate the transition of spectral fluorescence lifetime imaging into clinical applications.

Aim: We present the experiments on multispectral fluorescence lifetime imaging with a detailed analysis of the fluorescence decays and spectral profiles of the reduced nicotinamide adenine dinucleotide and oxidized flavin under a single excitation wavelength aimed at understanding whether the use of multispectral detection is helpful for metabolic imaging of cancer cells.

Approach: We use two-photon spectral fluorescence lifetime imaging microscopy. Starting from model solutions, we switched to cell cultures treated by metabolic inhibitors and then studied the metabolism of cells within tumor spheroids.

Results: The use of a multispectral detector in combination with an excitation at a single wavelength of 750 nm allows the identification of fluorescence signals from three components: free and bound NAD(P)H, and flavins based on the global fitting procedure. Multispectral data make it possible to assess not only the lifetime but also the spectral shifts of emission of flavins caused by chemical perturbations. Altogether, the informative parameters of the developed approach are the ratio of free and bound NAD(P)H amplitudes, the decay time of bound NAD(P)H, the amplitude of flavin fluorescence signal, the fluorescence decay time of flavins, and the spectral shift of the emission signal of flavins. Hence, with multispectral fluorescence lifetime imaging, we get five independent parameters, of which three are related to flavins.

Conclusions: The approach to probe the metabolic state of cells in culture and spheroids using excitation at a single wavelength of 750 nm and a fluorescence time-resolved spectral detection with the consequent global analysis of the data not only simplifies image acquisition protocol but also allows to disentangle the impacts of free and bound NAD(P)H, and flavin components evaluate changes in their fluorescence parameters (emission spectra and fluorescence lifetime) upon treating cells with metabolic inhibitors and sense metabolic heterogeneity within 3D tumor spheroids.

意义重大:还原型烟酰胺腺嘌呤二核苷酸和氧化型黄素辅助因子的自发荧光特性对于评估细胞的代谢状态非常重要。对自发荧光信号的光谱和时间特征进行详细分析的方法可为了解细胞和生物组织的生化过程提供更多信息,并促进光谱荧光寿命成像技术向临床应用的过渡。目的:我们介绍了多光谱荧光寿命成像实验,详细分析了单一激发波长下还原型烟酰胺腺嘌呤二核苷酸和氧化型黄素的荧光衰减和光谱轮廓,旨在了解使用多光谱检测是否有助于癌细胞的代谢成像:我们使用双光子光谱荧光寿命成像显微镜。从模型溶液开始,我们改用代谢抑制剂处理细胞培养物,然后研究肿瘤球体内细胞的代谢:结果:使用多光谱检测器并结合 750 nm 单波长激发,可以根据全局拟合程序识别来自三种成分的荧光信号:游离和结合的 NAD(P)H 以及黄素。多光谱数据不仅能评估黄素的寿命,还能评估化学扰动引起的黄素发射光谱偏移。总之,所开发方法的信息参数包括游离和结合 NAD(P)H 振幅的比率、结合 NAD(P)H 的衰减时间、黄素荧光信号的振幅、黄素的荧光衰减时间以及黄素发射信号的光谱偏移。因此,通过多光谱荧光寿命成像,我们可以得到五个独立的参数,其中三个与黄素有关:使用单一波长(750 nm)激发和荧光时间分辨光谱检测来探测培养细胞和球形细胞的新陈代谢状态,并随之对数据进行全局分析,这种方法不仅简化了图像采集方案,还能在使用新陈代谢抑制剂处理细胞时,通过评估其荧光参数(发射光谱和荧光寿命)的变化来区分游离和结合的 NAD(P)H 和黄素成分的影响,并感知三维肿瘤球体内的新陈代谢异质性。
{"title":"Simultaneous assessment of NAD(P)H and flavins with multispectral fluorescence lifetime imaging microscopy at a single excitation wavelength of 750 nm.","authors":"Boris Yakimov, Anastasia Komarova, Elena Nikonova, Artem Mozherov, Liubov Shimolina, Marina Shirmanova, Wolfgang Becker, Evgeny Shirshin, Vladislav Shcheslavskiy","doi":"10.1117/1.JBO.29.10.106501","DOIUrl":"10.1117/1.JBO.29.10.106501","url":null,"abstract":"<p><strong>Significance: </strong>Autofluorescence characteristics of the reduced nicotinamide adenine dinucleotide and oxidized flavin cofactors are important for the evaluation of the metabolic status of the cells. The approaches that involve a detailed analysis of both spectral and time characteristics of the autofluorescence signals may provide additional insights into the biochemical processes in the cells and biological tissues and facilitate the transition of spectral fluorescence lifetime imaging into clinical applications.</p><p><strong>Aim: </strong>We present the experiments on multispectral fluorescence lifetime imaging with a detailed analysis of the fluorescence decays and spectral profiles of the reduced nicotinamide adenine dinucleotide and oxidized flavin under a single excitation wavelength aimed at understanding whether the use of multispectral detection is helpful for metabolic imaging of cancer cells.</p><p><strong>Approach: </strong>We use two-photon spectral fluorescence lifetime imaging microscopy. Starting from model solutions, we switched to cell cultures treated by metabolic inhibitors and then studied the metabolism of cells within tumor spheroids.</p><p><strong>Results: </strong>The use of a multispectral detector in combination with an excitation at a single wavelength of 750 nm allows the identification of fluorescence signals from three components: free and bound NAD(P)H, and flavins based on the global fitting procedure. Multispectral data make it possible to assess not only the lifetime but also the spectral shifts of emission of flavins caused by chemical perturbations. Altogether, the informative parameters of the developed approach are the ratio of free and bound NAD(P)H amplitudes, the decay time of bound NAD(P)H, the amplitude of flavin fluorescence signal, the fluorescence decay time of flavins, and the spectral shift of the emission signal of flavins. Hence, with multispectral fluorescence lifetime imaging, we get five independent parameters, of which three are related to flavins.</p><p><strong>Conclusions: </strong>The approach to probe the metabolic state of cells in culture and spheroids using excitation at a single wavelength of 750 nm and a fluorescence time-resolved spectral detection with the consequent global analysis of the data not only simplifies image acquisition protocol but also allows to disentangle the impacts of free and bound NAD(P)H, and flavin components evaluate changes in their fluorescence parameters (emission spectra and fluorescence lifetime) upon treating cells with metabolic inhibitors and sense metabolic heterogeneity within 3D tumor spheroids.</p>","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"29 10","pages":"106501"},"PeriodicalIF":3.0,"publicationDate":"2024-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11440180/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142347405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Dual optical elastography detects TGF - β -induced alterations in the biomechanical properties of skin scaffolds. 双光学弹性成像技术可检测 TGF - β 诱导的皮肤支架生物力学特性变化。
IF 3.5 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-18 DOI: 10.1117/1.jbo.29.9.095002
Taye T Mekonnen,Yogeshwari S Ambekar,Christian Zevallos-Delgado,Achuth Nair,Fernando Zvietcovich,Hoda Zarkoob,Manmohan Singh,Yi Wei Lim,Marc Ferrer,Salavat R Aglyamov,Giuliano Scarcelli,Min Jae Song,Kirill V Larin
SignificanceThe skin's mechanical properties are tightly regulated. Various pathologies can affect skin stiffness, and understanding these changes is a focus in tissue engineering. Ex vivo skin scaffolds are a robust platform for evaluating the effects of various genetic and molecular interactions on the skin. Transforming growth factor-beta ( TGF - β ) is a critical signaling molecule in the skin that can regulate the amount of collagen and elastin in the skin and, consequently, its mechanical properties.AimThis study investigates the biomechanical properties of bio-engineered skin scaffolds, focusing on the influence of TGF - β , a signaling molecule with diverse cellular functions.ApproachThe TGF - β receptor I inhibitor, galunisertib, was employed to assess the mechanical changes resulting from dysregulation of TGF - β . Skin scaffold samples, grouped into three categories (control, TGF - β -treated, and TGF - β + galunisertib-treated), were prepared in two distinct culture media-one with aprotinin (AP) and another without. Two optical elastography techniques, namely wave-based optical coherence elastography (OCE) and Brillouin microscopy, were utilized to quantify the biomechanical properties of the tissues.ResultsResults showed significantly higher wave speed (with AP, p < 0.001 ; without AP, p < 0.001 ) and Brillouin frequency shift (with AP, p < 0.001 ; without AP, p = 0.01 ) in TGF - β -treated group compared with the control group. The difference in wave speed between the control and TGF - β + galunisertib with ( p = 0.10 ) and without AP ( p = 0.36 ) was not significant. Moreover, the TGF - β + galunisertib-treated group exhibited lower wave speed without and with AP and reduced Brillouin frequency shift than the TGF - β -treated group without AP, further strengthening the potential role of TGF - β in regulating the mechanical properties of the samples.ConclusionsThese findings offer valuable insights into TGF - β -induced biomechanical alterations in bio-engineered skin scaffolds, highlighting the potential of OCE and Brillouin microscopy in the development of targeted therapies in conditions involving abnormal tissue remodeling and fibrosis.
意义皮肤的机械特性受到严格调控。各种病变都会影响皮肤硬度,了解这些变化是组织工程学的重点。体外皮肤支架是评估各种基因和分子相互作用对皮肤影响的可靠平台。转化生长因子-β(TGF - β)是皮肤中的一种关键信号分子,它能调节皮肤中胶原蛋白和弹性蛋白的数量,进而调节皮肤的机械性能。方法采用 TGF - β 受体 I 抑制剂 galunisertib 来评估 TGF - β 失调导致的力学变化。皮肤支架样本分为三类(对照组、TGF - β 处理组和 TGF - β + 加仑尼塞替布处理组),分别在两种不同的培养基中制备--一种含有阿普罗宁(AP),另一种没有。结果表明,与对照组相比,TGF - β 处理组的波速(含 AP,p < 0.001;不含 AP,p < 0.001)和布里渊频移(含 AP,p < 0.001;不含 AP,p = 0.01)明显更高。对照组与 TGF - β + galunisertib(有 AP 时)(p = 0.10)和无 AP 时(p = 0.36)的波速差异不显著。此外,TGF - β + galunisertib 处理组在无 AP 和有 AP 的情况下波速较低,布里渊频移较无 AP 的 TGF - β 处理组小,这进一步加强了 TGF - β 在调节样品机械性能方面的潜在作用。结论 这些发现为了解 TGF - β 在生物工程皮肤支架中诱导的生物力学改变提供了有价值的见解,凸显了 OCE 和布里渊显微镜在开发涉及异常组织重塑和纤维化的靶向疗法方面的潜力。
{"title":"Dual optical elastography detects TGF - β -induced alterations in the biomechanical properties of skin scaffolds.","authors":"Taye T Mekonnen,Yogeshwari S Ambekar,Christian Zevallos-Delgado,Achuth Nair,Fernando Zvietcovich,Hoda Zarkoob,Manmohan Singh,Yi Wei Lim,Marc Ferrer,Salavat R Aglyamov,Giuliano Scarcelli,Min Jae Song,Kirill V Larin","doi":"10.1117/1.jbo.29.9.095002","DOIUrl":"https://doi.org/10.1117/1.jbo.29.9.095002","url":null,"abstract":"SignificanceThe skin's mechanical properties are tightly regulated. Various pathologies can affect skin stiffness, and understanding these changes is a focus in tissue engineering. Ex vivo skin scaffolds are a robust platform for evaluating the effects of various genetic and molecular interactions on the skin. Transforming growth factor-beta ( TGF - β ) is a critical signaling molecule in the skin that can regulate the amount of collagen and elastin in the skin and, consequently, its mechanical properties.AimThis study investigates the biomechanical properties of bio-engineered skin scaffolds, focusing on the influence of TGF - β , a signaling molecule with diverse cellular functions.ApproachThe TGF - β receptor I inhibitor, galunisertib, was employed to assess the mechanical changes resulting from dysregulation of TGF - β . Skin scaffold samples, grouped into three categories (control, TGF - β -treated, and TGF - β + galunisertib-treated), were prepared in two distinct culture media-one with aprotinin (AP) and another without. Two optical elastography techniques, namely wave-based optical coherence elastography (OCE) and Brillouin microscopy, were utilized to quantify the biomechanical properties of the tissues.ResultsResults showed significantly higher wave speed (with AP, p < 0.001 ; without AP, p < 0.001 ) and Brillouin frequency shift (with AP, p < 0.001 ; without AP, p = 0.01 ) in TGF - β -treated group compared with the control group. The difference in wave speed between the control and TGF - β + galunisertib with ( p = 0.10 ) and without AP ( p = 0.36 ) was not significant. Moreover, the TGF - β + galunisertib-treated group exhibited lower wave speed without and with AP and reduced Brillouin frequency shift than the TGF - β -treated group without AP, further strengthening the potential role of TGF - β in regulating the mechanical properties of the samples.ConclusionsThese findings offer valuable insights into TGF - β -induced biomechanical alterations in bio-engineered skin scaffolds, highlighting the potential of OCE and Brillouin microscopy in the development of targeted therapies in conditions involving abnormal tissue remodeling and fibrosis.","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"9 1","pages":"095002"},"PeriodicalIF":3.5,"publicationDate":"2024-09-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142258332","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
PoLambRimetry: a multispectral polarimetric atlas of lamb brain. PoLambRimetry:羔羊大脑多光谱极坐标图集。
IF 3.5 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-17 DOI: 10.1117/1.jbo.29.9.096002
Verónica Mieites,Giulio Anichini,Ji Qi,Kevin O'Neill,Olga M Conde,Daniel S Elson
SignificanceMueller matrix imaging (MMI) is a comprehensive form of polarization imaging useful for assessing structural changes. However, there is limited literature on the polarimetric properties of brain specimens, especially with multispectral analysis.AimWe aim to employ multispectral MMI for an exhaustive polarimetric analysis of brain structures, providing a reference dataset for future studies and enhancing the understanding of brain anatomy for clinicians and researchers.ApproachA multispectral wide-field MMI system was used to measure six fresh lamb brain specimens. Multiple decomposition methods (forward polar, symmetric, and differential) and polarization invariants (indices of polarimetric purity and anisotropy coefficients) have been calculated to obtain a complete polarimetric description of the samples. A total of 16 labels based on major brain structures, including grey matter (GM) and white matter (WM), were identified. K -nearest neighbors classification was used to distinguish between GM and WM and validate the feasibility of MMI for WM identification.ResultsAs the wavelength increases, both depolarization and retardance increase, suggesting enhanced tissue penetration into deeper layers. Moreover, utilizing multiple wavelengths allowed us to track dynamic shifts in the optical axis of retardance within the brain tissue, providing insights into morphological changes in WM beneath the cortical surface. The use of multispectral data for classification outperformed all results obtained with single-wavelength data and provided over 95% accuracy for the test dataset.ConclusionsThe consistency of these observations highlights the potential of multispectral wide-field MMI as a non-invasive and effective technique for investigating the brain's architecture.
意义穆勒矩阵成像(MMI)是偏振成像的一种综合形式,可用于评估结构变化。我们的目标是利用多光谱 MMI 对大脑结构进行详尽的偏振分析,为未来的研究提供参考数据集,并加深临床医生和研究人员对大脑解剖学的理解。方法利用多光谱宽视场 MMI 系统测量六块新鲜羊羔大脑标本。通过计算多种分解方法(正向极性、对称和微分)和极化不变量(极化纯度指数和各向异性系数),获得了样本的完整极化描述。根据灰质(GM)和白质(WM)等主要大脑结构,共确定了 16 个标签。结果 随着波长的增加,去极化和延迟均增加,表明组织对深层的穿透力增强。此外,利用多个波长,我们可以跟踪脑组织内延迟光轴的动态变化,从而深入了解皮层表面下 WM 的形态变化。使用多光谱数据进行分类的结果优于使用单波长数据获得的所有结果,测试数据集的准确率超过 95%。
{"title":"PoLambRimetry: a multispectral polarimetric atlas of lamb brain.","authors":"Verónica Mieites,Giulio Anichini,Ji Qi,Kevin O'Neill,Olga M Conde,Daniel S Elson","doi":"10.1117/1.jbo.29.9.096002","DOIUrl":"https://doi.org/10.1117/1.jbo.29.9.096002","url":null,"abstract":"SignificanceMueller matrix imaging (MMI) is a comprehensive form of polarization imaging useful for assessing structural changes. However, there is limited literature on the polarimetric properties of brain specimens, especially with multispectral analysis.AimWe aim to employ multispectral MMI for an exhaustive polarimetric analysis of brain structures, providing a reference dataset for future studies and enhancing the understanding of brain anatomy for clinicians and researchers.ApproachA multispectral wide-field MMI system was used to measure six fresh lamb brain specimens. Multiple decomposition methods (forward polar, symmetric, and differential) and polarization invariants (indices of polarimetric purity and anisotropy coefficients) have been calculated to obtain a complete polarimetric description of the samples. A total of 16 labels based on major brain structures, including grey matter (GM) and white matter (WM), were identified. K -nearest neighbors classification was used to distinguish between GM and WM and validate the feasibility of MMI for WM identification.ResultsAs the wavelength increases, both depolarization and retardance increase, suggesting enhanced tissue penetration into deeper layers. Moreover, utilizing multiple wavelengths allowed us to track dynamic shifts in the optical axis of retardance within the brain tissue, providing insights into morphological changes in WM beneath the cortical surface. The use of multispectral data for classification outperformed all results obtained with single-wavelength data and provided over 95% accuracy for the test dataset.ConclusionsThe consistency of these observations highlights the potential of multispectral wide-field MMI as a non-invasive and effective technique for investigating the brain's architecture.","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"18 1","pages":"096002"},"PeriodicalIF":3.5,"publicationDate":"2024-09-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142269341","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression. 压缩过程中乳腺肿瘤空间频域成像的蒙特卡罗模拟。
IF 3.5 3区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Pub Date : 2024-09-14 DOI: 10.1117/1.jbo.29.9.096001
Constance M Robbins,Kuanren Qian,Yongjie Jessica Zhang,Jana M Kainerstorfer
SignificanceNear-infrared optical imaging methods have shown promise for monitoring response to neoadjuvant chemotherapy (NAC) for breast cancer, with endogenous contrast coming from oxy- and deoxyhemoglobin. Spatial frequency domain imaging (SFDI) could be used to detect this contrast in a low-cost and portable format, but it has limited imaging depth. It is possible that local tissue compression could be used to reduce the effective tumor depth.AimTo evaluate the potential of SFDI for therapy response prediction, we aim to predict how changes to tumor size, stiffness, and hemoglobin concentration would be reflected in contrast measured by SFDI under tissue compression.ApproachFinite element analysis of compression on an inclusion-containing soft material is combined with Monte Carlo simulation to predict the measured optical contrast.ResultsWhen the effect of compression on blood volume is not considered, contrast gain from compression increases with the size and stiffness of the inclusion and decreases with the inclusion depth. With a model of reduction of blood volume from compression, compression reduces imaging contrast, an effect that is greater for larger inclusions and stiffer inclusions at shallower depths.ConclusionsThis computational modeling study represents a first step toward tracking tumor changes induced by NAC using SFDI and local compression.
意义近红外光学成像方法有望监测乳腺癌新辅助化疗(NAC)的反应,内源性对比度来自氧合血红蛋白和脱氧血红蛋白。空间频率域成像(SFDI)可用于以低成本和便携的形式检测这种对比度,但其成像深度有限。为了评估 SFDI 在治疗反应预测方面的潜力,我们旨在预测在组织压缩的情况下,肿瘤大小、硬度和血红蛋白浓度的变化将如何反映在 SFDI 测量的对比度中。方法对含有包涵体的软材料进行压缩的有限元分析与蒙特卡罗模拟相结合,预测测得的光学对比度。结果当不考虑压缩对血容量的影响时,压缩产生的对比度增益随包涵体的大小和硬度增加而增加,随包涵体深度的增加而减少。结论这项计算建模研究是利用 SFDI 和局部压缩跟踪 NAC 诱导的肿瘤变化的第一步。
{"title":"Monte Carlo simulation of spatial frequency domain imaging for breast tumors during compression.","authors":"Constance M Robbins,Kuanren Qian,Yongjie Jessica Zhang,Jana M Kainerstorfer","doi":"10.1117/1.jbo.29.9.096001","DOIUrl":"https://doi.org/10.1117/1.jbo.29.9.096001","url":null,"abstract":"SignificanceNear-infrared optical imaging methods have shown promise for monitoring response to neoadjuvant chemotherapy (NAC) for breast cancer, with endogenous contrast coming from oxy- and deoxyhemoglobin. Spatial frequency domain imaging (SFDI) could be used to detect this contrast in a low-cost and portable format, but it has limited imaging depth. It is possible that local tissue compression could be used to reduce the effective tumor depth.AimTo evaluate the potential of SFDI for therapy response prediction, we aim to predict how changes to tumor size, stiffness, and hemoglobin concentration would be reflected in contrast measured by SFDI under tissue compression.ApproachFinite element analysis of compression on an inclusion-containing soft material is combined with Monte Carlo simulation to predict the measured optical contrast.ResultsWhen the effect of compression on blood volume is not considered, contrast gain from compression increases with the size and stiffness of the inclusion and decreases with the inclusion depth. With a model of reduction of blood volume from compression, compression reduces imaging contrast, an effect that is greater for larger inclusions and stiffer inclusions at shallower depths.ConclusionsThis computational modeling study represents a first step toward tracking tumor changes induced by NAC using SFDI and local compression.","PeriodicalId":15264,"journal":{"name":"Journal of Biomedical Optics","volume":"7 1","pages":"096001"},"PeriodicalIF":3.5,"publicationDate":"2024-09-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142258333","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Biomedical Optics
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1