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Transcriptome analysis of tobacco in response to Ralstonia solanacearum infection 烟草对茄枯菌感染响应的转录组分析
Q3 Agricultural and Biological Sciences Pub Date : 2016-10-01 DOI: 10.18869/modares.jcp.5.4.617
C. Moslemkhani, J. Mozafari, M. Shams-bakhsh, E. M. Goltape
One of the best strategies to control bacterial wilt caused by Ralstonia solanacearum (Smith) is generally based on breeding resistant cultivars. The information obtained from the expression of plant defense genes will provide new insight for improving plant resistance against pathogens. This study was to identify inducible genes under defense no death (DND) reaction of tobacco (Nicotiana tabacum)-R. solanacearum interaction using cDNAAFLP technique. In this assay five different primer combinations were used. Out of 1320 Transcript derived fragments (TDF) that were detected, 101 fragments were identified as differentially expressed genes in 0, 24, 48 and 72 hours post inoculation. Most of the differentially expressed genes were obtained 48 hours post inoculation. Following sequencing, most of sequenced TDFs showed homology to known genes interfering in signaling, regulation and defense functions. DND phenotype in tobacco has some similarities specially in signaling process with mechanism associated with induction of the hypersensitive reaction and it is distinct from general defense mechanisms. Keyword: Tobacco, Ralstonia solanacearum, transcriptome, interaction
防治青枯病(Ralstonia solanacearum, Smith)的最佳策略之一是培育抗病品种。从植物防御基因表达中获得的信息将为提高植物抗病能力提供新的思路。本研究旨在鉴定烟草(Nicotiana tabacum)-R抗死亡(defense no death, DND)反应诱导基因。利用cDNAAFLP技术研究龙葵相互作用。在这个实验中,使用了五种不同的引物组合。在检测到的1320个转录本衍生片段(TDF)中,101个片段在接种后0、24、48和72小时被鉴定为差异表达基因。大多数差异表达基因在接种后48小时获得。经测序,大部分tdf序列与已知的信号、调控和防御功能干扰基因具有同源性。烟草DND表型具有一定的相似性,特别是在信号传导过程和诱导过敏反应的相关机制上,与一般的防御机制不同。关键词:烟草,茄枯菌,转录组,互作
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引用次数: 0
Description of four species of Tylenchidae Örley, 1880 (Nematoda: Tylenchomorpha) with two new records from Iran 标题线虫科Örley四种记述,1880(线虫纲:线虫科)并伊朗两新记录
Q3 Agricultural and Biological Sciences Pub Date : 2016-10-01 DOI: 10.18869/MODARES.JCP.5.4.627
B. Golhasan, R. Heydari, M. Esmaeili, Hadi Ghorbanzad
During a nematological survey, nineteen known species of plantparasitic nematodes belonging to the family Tylenchidae (Tylenchomorpha: Tylenchoidea) were collected and identified from different localities of West Azerbayjan and Kermanshah provinces, Iran. Among them two species, namely Discotylenchus attenuatus and Tylenchus bhitaii, are new records for Iranian nematode fauna, the male of T. bhitaii is recorded for the first time. Also, two previously reported species Filenchus quartus and Tylenchus stachys are illustrated and described. Descriptions, morphometric data, line drawings and microscopic photographs are provided.
在一项线虫学调查中,从伊朗西阿塞拜疆省和克尔曼沙阿省的不同地点收集和鉴定了19种已知的植物寄生线虫,属于Tylenchidae (Tylenchomorpha: tylenchoi总科)。其中两种为伊朗线虫区系的新记录种,分别为衰减蝶翅虫(Discotylenchus attenuatus)和布氏蝶翅虫(Tylenchus bhitaii),布氏蝶翅虫的雄虫为首次记录。此外,还对两个先前报道的物种Filenchus quartus和Tylenchus stachys进行了说明和描述。提供了描述、形态测量数据、线条图和显微照片。
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引用次数: 1
Antifungal effects of some medicinal and aromatic plant essential oils against Alternaria solani 一些药用和芳香植物精油对茄赤霉的抑菌作用
Q3 Agricultural and Biological Sciences Pub Date : 2016-10-01 DOI: 10.18869/MODARES.JCP.5.4.603
S. Bahraminejad, Behnaz Seifolahpour, R. Amiri
In this study, anti Alternaria solani effects of essential oils of 11 medicinal and aromatic plant species belonging to four families collected from the west of Iran were investigated based on agar dilution method with five replications at concentration of 1.0 μl/ml. The results showed that the highest inhibitory effect belonged to Oliveria decumbens, Cinnamomum zeylanicum, Carum copticum and Thymus kotschyanus which completely inhibited the mycelial growth of the fungus. Therefore, their activity was examined in lower concentrations, too. The essential oil of O. decumbens at concentration of 0.50 and 0.25 μl/ml completely suppressed the mycelial growth of the fungus. The major constituents of its essential oil were carvacrol (46.53%), thymol (23.75%), p-Cymene (13.70%), γ-terpinene (7.66%) and myristicin (3.65%), respectively. Thus, the essential oil of this species with the highest antiAlternaria activity could be selected for further studies on in vivo application as natural fungicide.
本研究采用琼脂稀释法,对采自伊朗西部4科11种药用和芳香植物精油进行了5次稀释,浓度为1.0 μl/ml。结果表明,对赤霉病菌的抑菌效果最好的是赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌赤霉病菌。因此,在较低浓度下也检测了它们的活性。0.50 μl/ml和0.25 μl/ml浓度的卧枕草精油完全抑制了真菌菌丝的生长。其挥发油的主要成分分别为香芹酚(46.53%)、百里香酚(23.75%)、对伞花烃(13.70%)、γ-松油烯(7.66%)和肉豆蔻素(3.65%)。因此,该植物精油具有较高的抗交替菌活性,可作为天然杀菌剂进行体内应用研究。
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引用次数: 13
Response of tomato cultivars to agroinfection with Beet curly top Iran virus 番茄品种对甜菜卷顶伊朗病毒感染的反应
Q3 Agricultural and Biological Sciences Pub Date : 2016-09-20 DOI: 10.18869/MODARES.JCP.5.3.473
Farnaz Khoshnazar, O. Eini
Beet curly top Iran virus (BCTIV) is a member of the genus Becurtovirus (family Geminiviridae) which constrain host crop production in various geographical regions in Iran. This virus infects several crops such as sugar beet Beta vulgaris and tomato Solanum lycopersicum. BCTIV infected tomato shows leaf curling, leaf distortion and stunting. In this study, we investigated the response of various tomato cultivars to BCTIV infection using an infectious clone of BCTIV under glasshouse condition at the University of Zanjan in 2013-2014. Based on a completely randomized design experiment twelve tomato cultivars were tested for their reaction to BCTIV infection. The replication of virus and symptom production was recorded and analyzed. Based on the obtained coefficient of infection and disease severity index, none of the tested cultivars was found resistance to the virus infection. However, one of the tested cultivars, Super Chief, showed no leaf curling symptom and the virus replicated at a significantly lower level in this cultivar as compared to a susceptible cultivar, Alindi 811, using quantitative PCR. Tomato cultivars including Grosse Lisse and Early Eurbana were grouped as susceptible while the other cultivars including Super Star were moderately susceptible to the virus infection. Therefore, growing this cultivar shows promise for an increase of yields from tomato plants prone to BCTIV infection after complementary field experiments. The screening of more cultivars or wild-type tomatoes for the identification of gene/s providing resistance to this viral disease is suggested.
伊朗甜菜卷顶病毒(BCTIV)是Becurtovirus属(双病毒科)的一员,在伊朗不同地理区域限制寄主作物生产。这种病毒感染几种作物,如甜菜和番茄。感染BCTIV的番茄表现为叶片卷曲、叶片扭曲和发育迟缓。本研究于2013-2014年在赞詹大学利用BCTIV感染克隆在温室条件下研究了不同番茄品种对BCTIV感染的反应。采用完全随机设计试验,检测了12个番茄品种对BCTIV感染的反应。对病毒复制和症状产生进行了记录和分析。根据获得的侵染系数和病害严重程度指数,所有被试品种均未发现对病毒侵染具有抗性。然而,其中一个被试品种Super Chief没有出现卷叶症状,并且与易感品种Alindi 811相比,该品种的病毒复制量显著降低。番茄品种对该病毒的易感程度为高、早欧巴纳,其余品种对该病毒的易感程度为中等。因此,在补充田间试验后,种植该品种有望提高BCTIV感染番茄植株的产量。建议筛选更多的品种或野生型番茄,以鉴定对该病毒病具有抗性的基因。
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引用次数: 3
Inhibition of Chilo partellus (Lepidoptera: Pyralidae) gut proteases with Ipomoea batatas inhibitors Ipomoea batatas抑制剂对褐家蝇肠道蛋白酶的抑制作用
Q3 Agricultural and Biological Sciences Pub Date : 2016-09-19 DOI: 10.18869/MODARES.JCP.5.3.461
Balaji Panchal, M. S. Kachole
Chilo partellus is a devastating sorghum and maize pest that exists worldwide. C. partellus gut proteases (CPGPs) were isolated, purified and characterized. We analyzed potential trypsin and chymotrypsin inhibitors (TIs) from tuber plants to identify the protease inhibitors (PIs) of CPGPs. PIs from Ipomoea batatas completely inhibited protease activity and growth and led to reduced C. partellus insect larvae weights. One PI was purified from I. batatas tubers and identified as a potent antagonist of CPGPs. In conclusion, we identified Ipomoea batatas inhibitors with significant potential applications in developing resistant transgenic sorghum and maize crops.
小叶螟(Chilo partellus)是一种在世界范围内存在的具有破坏性的高粱和玉米害虫。分离纯化了部ellus肠道蛋白酶(CPGPs),并对其进行了表征。我们分析了块茎植物中潜在的胰蛋白酶和凝乳胰蛋白酶抑制剂(TIs),以鉴定cpgp的蛋白酶抑制剂(pi)。枇杷多糖完全抑制了蛋白酶活性和生长,降低了褐藻幼虫的体重。从巴塔塔块茎中纯化了一种PI,并鉴定为cpgp的有效拮抗剂。综上所述,我们发现了在抗性转基因高粱和玉米作物中具有重要应用潜力的Ipomoea batatas抑制剂。
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引用次数: 2
Calling song structure of Cicada orni Linnaeus (Hemiptera: Cicadidae) in Iran: A comparative study with other areas 伊朗鸟蝉(半翅目:蝉科)鸣声结构与其他地区的比较研究
Q3 Agricultural and Biological Sciences Pub Date : 2016-07-01 DOI: 10.18869/MODARES.JCP.5.2.251
M. Mehdipour, Jalal Jalali Sendi, H. Zamanian
Cicada orni Linnaeus, 1758 is an abundant and common cicada across Europe, North Africa, and western Asia including Iran. The male cicada produces a loud calling song for attraction of females from a long distance. The calling songs are known often to be species-specific and to function in part for species recognition. The present study compares variations in calling song of C. orni in Iran with those reported from other areas and also signifies the importance of calling song in species identification. C. orni were collected in Mazandaran, Iran during summer 2010. Four features were used: echeme duration, echeme period, interecheme interval, number of echeme/s and dominant frequency. Findings of present study showed some resemblance in time and frequency domains in the calling song among the populations of C. orni from Iran and those investigated in Greece, Iberian Peninsula and Turkey. The parameters of calling song showed maximal resemblance with species of Kosmas (Greece). The present results do not support C. orni from Iran as an independent subspecies. Thus, it is concluded that every feature of calling song can be effective in species recognition as is the case for several other parameters.
林奈蝉,1758年,是一种分布在欧洲、北非和西亚(包括伊朗)的丰富而常见的蝉。雄蝉发出响亮的鸣叫,以吸引远处的雌蝉。鸣叫的歌声通常是物种特有的,在一定程度上起着物种识别的作用。本研究比较了伊朗鸟耳鸟鸣声与其他地区报道的鸟耳鸟鸣声的差异,也说明了鸟耳鸟鸣声在物种鉴定中的重要性。于2010年夏季在伊朗Mazandaran采集到库尔尼。采用四个特征:退仿持续时间、退仿周期、退仿间间隔、退仿次数/秒和显性频率。本研究结果表明,来自伊朗和希腊、伊比利亚半岛和土耳其的鸟喙鸟种群的鸣声在时间和频率域上具有一定的相似性。鸣声参数与希腊科斯马属有极大的相似性。目前的研究结果不支持来自伊朗的鸟耳锥虫是一个独立的亚种。因此,我们可以得出结论,鸣声的每一个特征都可以有效地识别物种,就像其他几个参数一样。
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引用次数: 1
First record of Hemiptarsenus autonomus (Mercet, 1924) (Hymenoptera: Eulophidae) in the Middle East 中东地区首次记录的自主半蜂(Mercet, 1924)(膜翅目:蜂科)
Q3 Agricultural and Biological Sciences Pub Date : 2016-07-01 DOI: 10.18869/MODARES.JCP.5.2.307
Amir-Reza Piruznia, H. Lotfalizadeh, M. Zargaran
Hemiptarsenus autonomus (Mercet, 1924) (Hymenoptera: Eulophidae, Eulophinae) was found for the first time outside of Europe. Studied specimen was collected by a Malaise trap in the north west of Iran, East-Azarbaijan province, Khajeh (46°38'E & 38°09'N). Current record of Hemiptarsenus species of Iran adds up to seven species. These species and their geographical distribution in Iran are listed.
自主半栉蜂(Hemiptarsenus autonomus, Mercet, 1924)(膜翅目:栉蜂科,栉蜂科)在欧洲以外首次发现。所研究的标本是在伊朗西北部,东阿塞拜疆省,Khajeh(46°38′e & 38°09′n)用一个诱捕器收集的。伊朗目前记录的半跗猴物种总共有7种。列出了这些物种及其在伊朗的地理分布。
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引用次数: 1
Morphological and molecular characterization of Leptonchus granulosus Cobb, 1920 (Dorylaimida: Leptonchidae) from Iran 伊朗细粒细尾蚊,1920(细尾蚊目:细尾蚊科)形态与分子特征
Q3 Agricultural and Biological Sciences Pub Date : 2016-07-01 DOI: 10.18869/MODARES.JCP.5.2.169
E. Konani, E. Pourjam, M. Pedram
Leptonchus granulosus, recovered from Lorestan province, is described and illustrated based on morphological, morphometric and molecular data. The Iranian population of the species is characterized by its body length of 1091 - 1374 m, cuticle distinctly two layered, outer layer finely annulated, inner layer distinctly annulated, being partly separated from the body and shriveled after fixation, cap-like lip region separated from the rest of body by constriction, distinctly sclerotised walls of prestoma and stoma, delicate needle-like odontostyle with distinct narrow lumen, 8.0-9.5 m long, slightly arcuate odontophore, 17-21 m long, with arms slightly thickened at base, small pear-shaped pharyngeal bulb, occupying 16.6-24.3% of pharynx length, simple intestine, very long prerectum (617-663 µm long), its junction with intestine having three distinct guard cells located between anterior ovary and cardia, didelphic female reproductive system, composed of equally sized less developed tracts, but with distinct parts (tubular uterus, simple oviduct and ovary), conoid to hemispheroid tail and absence of males. In comparison with the available reports of the species, no remarkable variation in morphometric data ranges was observed. This is the first representative of the genus for Iran's nematode fauna found so far. Molecular phylogenetic studies of Iranian population of L. granulosus using 1669 nt partial sequences of 18S rDNA revealed it forming a clade with another isolate of the species in Bayesian inference (BI) with 0.95 Bayesian posterior probability (BPP).
根据形态学、形态计量学和分子数据,对在洛勒斯坦省发现的细粒Leptonchus进行了描述和说明。该物种伊朗种群的特征是体长1091 - 1374m,角质层明显两层,外层细环,内层明显环,部分与身体分离,固定后萎缩,帽状唇区与身体其他部分收缩,口前和口壁明显硬化,齿柱纤细,针状,腔明显狭窄,长8.0-9.5m,齿孔微弧形,长17-21m。单肠,很长的前直肠(617-663 μ m),其与肠的连接处有三个明显的保护细胞,位于卵巢前部和贲门之间,雌雄分体的生殖系统,由大小相等但不发达的生殖道组成,但有明显的部分(管状子宫、单输卵管和卵巢),圆锥状到半球形的尾巴,没有雄性。与现有的物种报告相比,在形态测量数据范围内未观察到显着变化。这是迄今为止发现的伊朗线虫动物群属的第一个代表。利用L. granulosus伊朗居群18S rDNA 1669 nt部分序列进行分子系统发育研究,结果表明该居群与该种另一分离株在贝叶斯推断(BI)中形成一个分支,贝叶斯后验概率(BPP)为0.95。
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引用次数: 0
Observations on Hoplolaimus indicus Sher, 1963 and Hoplolaimus seinhorsti Luc, 1958 (Nematoda: Hoplolaimidae) from Southern Iran 对伊朗南部的Hoplolaimus indicus Sher,1963和Hoplolaimus seinhorsti Luc,1958(线虫目:Hoplolaimidae)的观察
Q3 Agricultural and Biological Sciences Pub Date : 2016-07-01 DOI: 10.18869/MODARES.JCP.5.2.189
Mahmoud Ahmadi Mansourabad, R. Ghaderi, L. Kashi, A. Karegar
Morphological observations are made on several populations of Hoplolaimus indicus and Hoplolaimus seinhorsti, recovered from rhizosphere of mango, tamarind, sour orange and sugarcane from the southern regions of Iran. Detailed studies on the two species Hoplolaimus dubius and H. indicus being separated from each other based on some morphological characters, revealed each of them having intra-specific and overlapping variations in morphology and morphometric ranges, enough for not separating two closely related aforementioned species and as a result, H. dubius is considered as a junior synonym of H. indicus. Observations on H. seinhorsti also supported the Siddiqi's decision on the synonymy of Hoplolaimus sheri with H. seinhorsti. The results of the phylogenetic analyses using D2-D3 expansion segments of 28S rRNA gene were in agreement with the results of previous works, i.e. the classic scheme for assigning species of the genus into two "ancestral" and/or "derived" groups was supported. In phylogenetic trees inferred, using different analysis methods, the Iranian populations of H. indicus were located in the same clade with H. seinhorsti and H. columbus, belonging to "derived" group of species of the genus characterized by having six nuclei in pharyngeal glands, less than four incisures at each lateral field and anteriorly situated position of excretory pore to hemizonid.
对从伊朗南部地区芒果、罗望子、酸橙和甘蔗根际中恢复的几个种群的indicus和seinhorsti进行形态学观察。对基于某些形态特征而被区分开来的两种可疑斗蜂(Hoplolaimus dubius)和印度红蜂(H. indicus)进行了详细的研究,发现它们在形态和形态测量范围上都存在种内和重叠的变异,足以区分上述两个密切相关的物种,因此,可疑斗蜂被认为是印度红蜂(H. indicus)的初级同义词。对H. seinhorsti的观察也支持Siddiqi关于Hoplolaimus sheri与H. seinhorsti同义的决定。利用28S rRNA基因D2-D3扩增段进行系统发育分析的结果与前人的研究结果一致,即支持将属的物种划分为两个“祖先”和/或“衍生”类群的经典方案。在系统发育树中,利用不同的分析方法推断,伊朗居群与H. seinhorsti和H. columbus属于同一进化支,属于该属的“衍生”类群,其特征是咽腺中有6个核,每个侧野少于4个切口,位于排泄孔前部至半锥状。
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引用次数: 6
Resistance evaluation of some commercial Vitis vinifera varieties to powdery mildew Erysiphe necator Schwein. in two regions of Iran 部分商品葡萄品种对白粉病的抗性评价。在伊朗的两个地区
Q3 Agricultural and Biological Sciences Pub Date : 2016-07-01 DOI: 10.18869/MODARES.JCP.5.2.229
H. Khiavi, A. Davoodi
Powdery mildew, caused by Erysiphe necator is a common and severe fungal disease of grapevine all over the world including Iran. Although the application of chemical fungicides is the most common control method, the use of resistant varieties may be the most effective and environmentally sound strategy for managing the disease. Twenty two grape varieties were evaluated against powdery mildew under natural infection and artificial inoculation during 2011-2013 in Ardabil and Qazvin provinces of Iran. In this study, Perlett, Robee seedless, Flame seedless and Tompson seedless varieties were immune; Mish-Pestan, Khoshnav and Torkamanestan 8 were highly resistant; Torkamanestan 4 and Superior seedless were resistant; Shahani-e-Qazvin and Shast-e-Arous were tolerant; Ghermez-e- Bidaneh, Sefid-e-Bidaneh, Fakhri, Sahebi-e-Ghermez, Peikami, Rishbaba-e- Sefid, Siyah-e-Samarghandi and Rotabi were susceptible and Rishbaba-e- Ghermez, Asgari, and Shahroodi were highly susceptible varieties to grape powdery mildew. In general, findings of this research may be used as resistance genetic sources for management of the disease in national and international programs.
白粉病是包括伊朗在内的世界各地葡萄常见的严重真菌病。虽然使用化学杀菌剂是最常见的防治方法,但使用抗药品种可能是防治该病最有效和最无害环境的战略。2011-2013年,对伊朗阿达比尔省和加兹温省22个葡萄品种在自然侵染和人工接种下的白粉病防治效果进行了评价。在本研究中,Perlett、Robee无籽、Flame无籽和Tompson无籽品种具有免疫活性;mishish - pesstan, Khoshnav和Torkamanestan 8具有高度抗性;Torkamanestan 4和Superior无籽具有抗性;Shahani-e-Qazvin和Shast-e-Arous是宽容的;Ghermez-e- Bidaneh、Sefid-e-Bidaneh、Fakhri、Sahebi-e-Ghermez、Peikami、Rishbaba-e- Sefid、Siyah-e-Samarghandi和Rotabi对葡萄白粉病敏感,Rishbaba-e- Ghermez、Asgari和Shahroodi对葡萄白粉病高度敏感。总的来说,本研究的发现可以作为国家和国际项目中疾病管理的抗性遗传来源。
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引用次数: 1
期刊
Journal of Crop Protection
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