Dorothea V Megarani, Lilia Yang, Hannah J Siler, Eva M Quijano Cardé, Christopher J Martyniuk, Paul M Hick, Joy A Becker, Esteban Soto, Win Surachetpong, Roy P E Yanong, Kuttichantran Subramaniam
Tilapia Lake Virus (TiLV) is a significant threat to global tilapia aquaculture, highlighting the need for rapid and accurate diagnostic methods to manage outbreaks and minimise economic losses. This study presents the development and partial validation of a one-pot assay integrating RT-LAMP with the CRISPR/Cas12b system for sensitive and specific TiLV detection. This assay amplifies viral RNA using RT-LAMP, while CRISPR/Cas12b enables a real-time detectable signal. Targeting a conserved region in TiLV segment four, the assay achieves results within 75 min at 62°C, with easy visualisation using a portable fluorescence viewer. It demonstrated high sensitivity, with a 95% limit of detection of 79.6 copies (95% CI: 48-132 copies), and high specificity, with no cross-reaction to other fish RNA or DNA viruses. Based on a validation panel of 261 samples from 9 source populations, the assay exhibited 92% diagnostic sensitivity (95% CI: 87%-96%) and 100% diagnostic specificity (95% CI: 97%-100%). When assessed as a non-lethal sample, gills provided a reliable and less invasive alternative despite lower viral loads compared to internal organs. Therefore, this partially validated one-pot assay is potentially practical for enhancing TiLV detection and disease management in aquaculture systems, especially in field settings and resource-limited laboratories.
{"title":"One-Pot RT-LAMP CRISPR/Cas12b Platform for Rapid Detection of Tilapia Lake Virus.","authors":"Dorothea V Megarani, Lilia Yang, Hannah J Siler, Eva M Quijano Cardé, Christopher J Martyniuk, Paul M Hick, Joy A Becker, Esteban Soto, Win Surachetpong, Roy P E Yanong, Kuttichantran Subramaniam","doi":"10.1111/jfd.70087","DOIUrl":"https://doi.org/10.1111/jfd.70087","url":null,"abstract":"<p><p>Tilapia Lake Virus (TiLV) is a significant threat to global tilapia aquaculture, highlighting the need for rapid and accurate diagnostic methods to manage outbreaks and minimise economic losses. This study presents the development and partial validation of a one-pot assay integrating RT-LAMP with the CRISPR/Cas12b system for sensitive and specific TiLV detection. This assay amplifies viral RNA using RT-LAMP, while CRISPR/Cas12b enables a real-time detectable signal. Targeting a conserved region in TiLV segment four, the assay achieves results within 75 min at 62°C, with easy visualisation using a portable fluorescence viewer. It demonstrated high sensitivity, with a 95% limit of detection of 79.6 copies (95% CI: 48-132 copies), and high specificity, with no cross-reaction to other fish RNA or DNA viruses. Based on a validation panel of 261 samples from 9 source populations, the assay exhibited 92% diagnostic sensitivity (95% CI: 87%-96%) and 100% diagnostic specificity (95% CI: 97%-100%). When assessed as a non-lethal sample, gills provided a reliable and less invasive alternative despite lower viral loads compared to internal organs. Therefore, this partially validated one-pot assay is potentially practical for enhancing TiLV detection and disease management in aquaculture systems, especially in field settings and resource-limited laboratories.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70087"},"PeriodicalIF":2.2,"publicationDate":"2025-11-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145634411","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Robert D Gonzales, Haley R Dutton, Reginald B Blaylock, Stephen A Bullard, Eric A Saillant
Amyloodinium ocellatum causes epizootics in marine fish hatcheries. Frozen, wild fish, often used as food in aquaculture, could introduce the disease. We investigated the parasite's ability to survive, reproduce and infect a host after freezing. Infected gills were frozen at -20°C for either 0, 24, 36, 48, or 72 h. Parasite viability was assessed first by placing thawed infected gills into tanks with naïve fish. Gills of the exposed fish were examined on day 0 and on days 4 and 7 post-exposure. Tomonts from infected gills in all freeze durations produced infections. However, dinospore production decreased and infections took longer to establish in fish exposed to tomonts from the 72 h treatment. Second, eight tomonts from each freeze duration were placed in 5 mL of 25 ppt artificial seawater at 22°C in individual wells of a 12-well plate and monitored for hatching. Ninety seven percent of tomonts from all treatments hatched. Tomonts frozen for up to 72 h survived, reproduced and infected fish, but dinospore production decreased as freeze duration increased. Extrapolation from the rate of reduction in dinospore production over the freeze durations tested suggests that a freeze duration of 237 h could inactivate all tomonts.
在海鱼孵化场中,细胞淀粉虫引起动物流行病。冷冻的野生鱼类,经常被用作水产养殖的食物,可能会引入这种疾病。我们研究了这种寄生虫在冷冻后的生存、繁殖和感染宿主的能力。感染的鳃在-20°C冷冻0、24、36、48或72小时。首先通过将解冻的受感染的鳃放入naïve鱼的水箱中来评估寄生虫的生存能力。暴露后第0天、第4天和第7天检查鱼鳃。在所有冻结时间内,来自受感染鳃的包囊均产生感染。然而,从72小时的处理中,暴露于包囊的鱼的恐龙孢子产量下降,感染需要更长的时间才能建立。其次,在12孔板的单个孔中,将每个冻结期的8个月放入5 mL 25 ppt的22°C人工海水中,并监测孵化情况。所有处理中97%的包囊孵化。包囊冷冻72小时后存活、繁殖并感染鱼类,但随着冷冻时间的延长,恐龙孢子的产量下降。根据冷冻时间对恐龙孢子产量减少率的推断,237小时的冷冻时间可以使所有包囊灭活。
{"title":"Freeze Tolerance of Amyloodinium ocellatum (Myzozoa: Blastodiniales).","authors":"Robert D Gonzales, Haley R Dutton, Reginald B Blaylock, Stephen A Bullard, Eric A Saillant","doi":"10.1111/jfd.70088","DOIUrl":"https://doi.org/10.1111/jfd.70088","url":null,"abstract":"<p><p>Amyloodinium ocellatum causes epizootics in marine fish hatcheries. Frozen, wild fish, often used as food in aquaculture, could introduce the disease. We investigated the parasite's ability to survive, reproduce and infect a host after freezing. Infected gills were frozen at -20°C for either 0, 24, 36, 48, or 72 h. Parasite viability was assessed first by placing thawed infected gills into tanks with naïve fish. Gills of the exposed fish were examined on day 0 and on days 4 and 7 post-exposure. Tomonts from infected gills in all freeze durations produced infections. However, dinospore production decreased and infections took longer to establish in fish exposed to tomonts from the 72 h treatment. Second, eight tomonts from each freeze duration were placed in 5 mL of 25 ppt artificial seawater at 22°C in individual wells of a 12-well plate and monitored for hatching. Ninety seven percent of tomonts from all treatments hatched. Tomonts frozen for up to 72 h survived, reproduced and infected fish, but dinospore production decreased as freeze duration increased. Extrapolation from the rate of reduction in dinospore production over the freeze durations tested suggests that a freeze duration of 237 h could inactivate all tomonts.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70088"},"PeriodicalIF":2.2,"publicationDate":"2025-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145634400","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Belén Fouz, Evelyn Carballeda-Carrasco, Javier Barriga-Cuartero, Yolanda Torres-Corral, Álvaro Robles, Carlos Zarza, Ysabel Santos
This study presents the first description and characterisation of Lactococcus garvieae isolated from diseased European sea bass (Dicentrarchus labrax) farmed in Spain. During autumn 2023, two fish farms were affected by infectious outbreaks causing moderate cumulative fish mortality (5%-10%). Diseased fish showed clinical signs of haemorrhagic septicaemia, compatible with lactococcosis. Standardised screening tests revealed the presence of Gram-positive cocci in the kidney, spleen and brain of the diseased fish, and negative results for parasites and viruses. Bacterial cultures recovered from the internal organs of all diseased fish were identified as Lactococcus garvieae by phenotypic, genetic, immunological and proteomic analyses. Strains were sensitive to oxytetracycline, florfenicol and erythromycin and resistant to trimethoprim sulfamethoxazole. In addition, representative isolates were virulent to juvenile sea bass and Senegalese sole (Solea senegalensis) after intracoelomic challenge with doses ranging from 106 to 107 CFU/fish. SDS-PAGE and immunoblotting analyses, using rabbit serum anti L. garvieae CECT 5274 and serum from trout immunised with a bivalent oil-based vaccine against L. garvieae-Yersinia ruckeri, showed that the current strains of sea bass shared some antigenic proteins with strains of L. garvieae from other hosts and with the reference strain of L. petauri DSM104842. Our overall results confirm the presence of this emerging pathogen in Spanish marine aquaculture and suggest that commercially available lactococcosis vaccines could confer some protection to sea bass, helping to prevent this new threat.
本研究首次描述和鉴定了从西班牙养殖的患病欧洲鲈鱼(Dicentrarchus labrax)中分离的garvieae乳球菌。2023年秋季,两个养鱼场受到传染病暴发的影响,造成中度累计鱼类死亡率(5%-10%)。患病鱼表现出出血性败血症的临床症状,与乳球菌病相符。标准化筛选试验显示,病鱼的肾脏、脾脏和大脑中存在革兰氏阳性球菌,而寄生虫和病毒的检测结果为阴性。经表型、遗传、免疫学和蛋白质组学分析,所有病鱼内脏细菌培养物均鉴定为garvieae乳球菌。菌株对土霉素、氟苯尼考和红霉素敏感,对甲氧苄啶、磺胺甲恶唑耐药。此外,有代表性的分离菌株对幼鲈鱼和塞内加尔鳎(Solea senegalensis)在腹腔内以106 ~ 107 CFU/鱼的剂量攻毒后具有毒性。利用兔血清抗猫乳杆菌CECT 5274和经二价油基疫苗免疫的鳟鱼血清进行SDS-PAGE和免疫印迹分析,结果表明,目前的海鲈鱼菌株与来自其他宿主的猫乳杆菌菌株和参考菌株ptauri L. DSM104842共有一些抗原蛋白。我们的总体结果证实了这种新兴病原体在西班牙海洋水产养殖中的存在,并表明市售乳球菌病疫苗可以给黑鲈提供一些保护,帮助预防这种新的威胁。
{"title":"First Description and Characterisation of Lactococcus garvieae Strains Causing Septicaemic Disease in Farmed Sea Bass (Dicentrarchus labrax; Linnaeus) in Spain.","authors":"Belén Fouz, Evelyn Carballeda-Carrasco, Javier Barriga-Cuartero, Yolanda Torres-Corral, Álvaro Robles, Carlos Zarza, Ysabel Santos","doi":"10.1111/jfd.70089","DOIUrl":"https://doi.org/10.1111/jfd.70089","url":null,"abstract":"<p><p>This study presents the first description and characterisation of Lactococcus garvieae isolated from diseased European sea bass (Dicentrarchus labrax) farmed in Spain. During autumn 2023, two fish farms were affected by infectious outbreaks causing moderate cumulative fish mortality (5%-10%). Diseased fish showed clinical signs of haemorrhagic septicaemia, compatible with lactococcosis. Standardised screening tests revealed the presence of Gram-positive cocci in the kidney, spleen and brain of the diseased fish, and negative results for parasites and viruses. Bacterial cultures recovered from the internal organs of all diseased fish were identified as Lactococcus garvieae by phenotypic, genetic, immunological and proteomic analyses. Strains were sensitive to oxytetracycline, florfenicol and erythromycin and resistant to trimethoprim sulfamethoxazole. In addition, representative isolates were virulent to juvenile sea bass and Senegalese sole (Solea senegalensis) after intracoelomic challenge with doses ranging from 10<sup>6</sup> to 10<sup>7</sup> CFU/fish. SDS-PAGE and immunoblotting analyses, using rabbit serum anti L. garvieae CECT 5274 and serum from trout immunised with a bivalent oil-based vaccine against L. garvieae-Yersinia ruckeri, showed that the current strains of sea bass shared some antigenic proteins with strains of L. garvieae from other hosts and with the reference strain of L. petauri DSM104842. Our overall results confirm the presence of this emerging pathogen in Spanish marine aquaculture and suggest that commercially available lactococcosis vaccines could confer some protection to sea bass, helping to prevent this new threat.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70089"},"PeriodicalIF":2.2,"publicationDate":"2025-11-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145634426","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Joy A Becker, Paul M Hick, Dorothea Megarani, Hannah Siler, Felipe Pierezan, Shannon N Gray, Kuttichantran Subramaniam
Infectious spleen and kidney necrosis virus (ISKNV) is a significant threat to global aquatic food security by causing large-scale mortality in the aquaculture of tilapia (Oreochromis niloticus) and mandarin fish (Siniperca chuatsi). ISKNV is a genogroup of Megalocytivirus pagrus1, along with RSIV and TRBIV, and their recent listing as WOAH-notifiable diseases highlights the need to assess spread pathways to prevent exotic pathogen incursions. An albino rainbow shark (Epalzeorhynchos frenatum) challenge model was used to evaluate the risk of ISKNV introduction from the trade in frozen seafood products by determining viability after freezing and the median infectious dose (ID50). Six donor fish were injected with ISKNV with tissues collected after clinical signs appeared and used immediately or stored at -20°C for 7 days. Challenge inocula were prepared consisting of snout, eyes, and brain (Pool A; representative of head-on eviscerated fish products), caudal skin and muscle (Pool B; representative of skin-on fillet only products) or peritoneal viscera (Pool C; positive control group). Fish were challenged by bath immersion or intraperitoneal injection and sampled for ISKNV detection by qPCR at morbidity/death, or on Day 14. Negative control fish all survived without detection of ISKNV. All tissue pools including 'skin-on fillet only' caused infection and disease via IP injection or immersion, whether used fresh or frozen, showing ISKNV remains infectious after 7 days at -20°C. The model estimated an ID50 of 42 ISKNV genome equivalents (95% CI: 19-98). This study is the first to investigate the potential for ISKNV spread via frozen fish products, a commodity frequently traded in international markets. The findings provide evidence to inform import risk assessments and highlight the need for further investigation into spread pathways involving uncooked, frozen fish products.
{"title":"Risk of Spread of Megalocytivirus pagrus1 (Infectious Spleen and Kidney Necrosis Virus) From Frozen Fillets.","authors":"Joy A Becker, Paul M Hick, Dorothea Megarani, Hannah Siler, Felipe Pierezan, Shannon N Gray, Kuttichantran Subramaniam","doi":"10.1111/jfd.70086","DOIUrl":"https://doi.org/10.1111/jfd.70086","url":null,"abstract":"<p><p>Infectious spleen and kidney necrosis virus (ISKNV) is a significant threat to global aquatic food security by causing large-scale mortality in the aquaculture of tilapia (Oreochromis niloticus) and mandarin fish (Siniperca chuatsi). ISKNV is a genogroup of Megalocytivirus pagrus1, along with RSIV and TRBIV, and their recent listing as WOAH-notifiable diseases highlights the need to assess spread pathways to prevent exotic pathogen incursions. An albino rainbow shark (Epalzeorhynchos frenatum) challenge model was used to evaluate the risk of ISKNV introduction from the trade in frozen seafood products by determining viability after freezing and the median infectious dose (ID<sub>50</sub>). Six donor fish were injected with ISKNV with tissues collected after clinical signs appeared and used immediately or stored at -20°C for 7 days. Challenge inocula were prepared consisting of snout, eyes, and brain (Pool A; representative of head-on eviscerated fish products), caudal skin and muscle (Pool B; representative of skin-on fillet only products) or peritoneal viscera (Pool C; positive control group). Fish were challenged by bath immersion or intraperitoneal injection and sampled for ISKNV detection by qPCR at morbidity/death, or on Day 14. Negative control fish all survived without detection of ISKNV. All tissue pools including 'skin-on fillet only' caused infection and disease via IP injection or immersion, whether used fresh or frozen, showing ISKNV remains infectious after 7 days at -20°C. The model estimated an ID<sub>50</sub> of 42 ISKNV genome equivalents (95% CI: 19-98). This study is the first to investigate the potential for ISKNV spread via frozen fish products, a commodity frequently traded in international markets. The findings provide evidence to inform import risk assessments and highlight the need for further investigation into spread pathways involving uncooked, frozen fish products.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70086"},"PeriodicalIF":2.2,"publicationDate":"2025-11-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145563515","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ji-Hwan Park, Jeong-Won Byun, Si-Ah Kim, Seong-Won Jang, Si-Woo Kim, Jong-Oh Kim
Streptococcus parauberis is recognised as a major pathogen in marine aquaculture species. This pathogen has been reported in Platichthys stellatus aquaculture farms in South Korea. To investigate the causative agent responsible for mass mortality, monthly disease monitoring was conducted at three aquaculture farms in Pohang. A total of 31 S. parauberis isolates were identified using Spa primers. Additionally, to confirm the pathogenicity of S. parauberis , starry flounder were intraperitoneally injected with strain AD112410, which resulted in a dose-dependent mortality pattern. Whole genome sequencing was conducted on strain AD112410 isolated from starry flounder and compared with that of other S. parauberis strains isolated from olive flounder. All S. parauberis isolates were classified as serotype Ia and exhibited γ-hemolysis. PCR detection revealed the presence of the tet(S) resistance gene in all farms, while erm(B) was absent only in farm C. Virulence genes (gapC and hasC) were found in all farms. All isolates showed resistance to tetracycline and oxytetracycline, while susceptibility to erythromycin and clindamycin depending on the presence of erm(B). These findings not only demonstrate an association between S. parauberis and mass mortality in starry flounder, but also indicate a correlation among serotype, antibiotic resistance genes, and antibiotic susceptibility.
{"title":"Genomic and Phenotypic Characterisation of Streptococcus parauberis Isolated From Starry Flounder (Platichthys stellatus): First Whole-Genome Analysis, Pathogenicity Assessment, and Antimicrobial Resistance Profiling.","authors":"Ji-Hwan Park, Jeong-Won Byun, Si-Ah Kim, Seong-Won Jang, Si-Woo Kim, Jong-Oh Kim","doi":"10.1111/jfd.70083","DOIUrl":"https://doi.org/10.1111/jfd.70083","url":null,"abstract":"<p><p>Streptococcus parauberis is recognised as a major pathogen in marine aquaculture species. This pathogen has been reported in Platichthys stellatus aquaculture farms in South Korea. To investigate the causative agent responsible for mass mortality, monthly disease monitoring was conducted at three aquaculture farms in Pohang. A total of 31 S. parauberis isolates were identified using Spa primers. Additionally, to confirm the pathogenicity of S. parauberis , starry flounder were intraperitoneally injected with strain AD112410, which resulted in a dose-dependent mortality pattern. Whole genome sequencing was conducted on strain AD112410 isolated from starry flounder and compared with that of other S. parauberis strains isolated from olive flounder. All S. parauberis isolates were classified as serotype Ia and exhibited γ-hemolysis. PCR detection revealed the presence of the tet(S) resistance gene in all farms, while erm(B) was absent only in farm C. Virulence genes (gapC and hasC) were found in all farms. All isolates showed resistance to tetracycline and oxytetracycline, while susceptibility to erythromycin and clindamycin depending on the presence of erm(B). These findings not only demonstrate an association between S. parauberis and mass mortality in starry flounder, but also indicate a correlation among serotype, antibiotic resistance genes, and antibiotic susceptibility.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70083"},"PeriodicalIF":2.2,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145549500","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The Carpione rhabdovirus strain 2023 (CAPRV2023) is an emerging viral pathogen that has caused significant morbidity and mortality in cultured golden pompano (Trachinotus ovatus) in China over recent years. There is an urgent need for a rapid and accurate method for the quantitative detection of CAPRV2023. In this study, we developed a TaqMan probe-based quantitative PCR assay targeting the N gene of CAPRV2023 and systematically evaluated its specificity, sensitivity, repeatability, and reproducibility of the assay. Both plasmid DNA, in vitro-transcribed RNA standards, and in vitro-transcribed RNA mixed with RNA extracted from CAPRV2023-negative golden pompano tissues were used as templates to evaluate assay performance under both optimal and biologically relevant conditions. Using plasmid DNA standards, the assay exhibited excellent linearity over a broad range of 2 × 101 to 5 × 109 copies/μL, with a standard curve of Y = -3.3132X + 39.142, a correlation coefficient of R2 = 0.9993, an amplification efficiency of 100.37%, and a detection limit of 20 copies per reaction. In vitro-transcribed RNA standards demonstrated robust linearity over the range of 2 × 102 to 2 × 109 copies/μL, with a standard curve of Y = -3.2327X + 45.502, a correlation coefficient of R2 = 0.9968, and a detection limit of 200 copies per reaction. Notably, when the in vitro-transcribed RNA standards were combined with RNA extracted from CAPRV2023-negative golden pompano tissues, the assay maintained similar performance, yielding a standard curve of Y = -3.2182X + 45.445, a correlation coefficient of R2 = 0.9967, and the same detection limit of 200 copies per reaction. These results indicate that the presence of background tissue RNA does not significantly interfere with assay accuracy or sensitivity. Specificity test revealed that the assay exhibits no cross-reactivity with common bacterial or viral agents present in various aquatic organisms. The assay demonstrated high reproducibility and repeatability, with intra-assay and inter-assay coefficients of variation (CVs) below 2.5%. Field sample detection yielded a significantly higher detection rate compared to the conventional PCR assay. The newly developed TaqMan qPCR assay provides a robust diagnostic tool for the efficient and accurate quantitative detection of CAPRV2023 in field samples and surveillance programs.
{"title":"Development of a TaqMan Probe-Based Quantitative PCR Assay Targeting the N Gene for Detection of Carpione rhabdovirus 2023.","authors":"Zhiyuan Huang, Heng Sun, Dandan Wu, Haoyu Wang, Bingxin Liao, Xiaofeng Chen, Shuanghu Cai, Yucong Huang","doi":"10.1111/jfd.70072","DOIUrl":"https://doi.org/10.1111/jfd.70072","url":null,"abstract":"<p><p>The Carpione rhabdovirus strain 2023 (CAPRV2023) is an emerging viral pathogen that has caused significant morbidity and mortality in cultured golden pompano (Trachinotus ovatus) in China over recent years. There is an urgent need for a rapid and accurate method for the quantitative detection of CAPRV2023. In this study, we developed a TaqMan probe-based quantitative PCR assay targeting the N gene of CAPRV2023 and systematically evaluated its specificity, sensitivity, repeatability, and reproducibility of the assay. Both plasmid DNA, in vitro-transcribed RNA standards, and in vitro-transcribed RNA mixed with RNA extracted from CAPRV2023-negative golden pompano tissues were used as templates to evaluate assay performance under both optimal and biologically relevant conditions. Using plasmid DNA standards, the assay exhibited excellent linearity over a broad range of 2 × 10<sup>1</sup> to 5 × 10<sup>9</sup> copies/μL, with a standard curve of Y = -3.3132X + 39.142, a correlation coefficient of R<sup>2</sup> = 0.9993, an amplification efficiency of 100.37%, and a detection limit of 20 copies per reaction. In vitro-transcribed RNA standards demonstrated robust linearity over the range of 2 × 10<sup>2</sup> to 2 × 10<sup>9</sup> copies/μL, with a standard curve of Y = -3.2327X + 45.502, a correlation coefficient of R<sup>2</sup> = 0.9968, and a detection limit of 200 copies per reaction. Notably, when the in vitro-transcribed RNA standards were combined with RNA extracted from CAPRV2023-negative golden pompano tissues, the assay maintained similar performance, yielding a standard curve of Y = -3.2182X + 45.445, a correlation coefficient of R<sup>2</sup> = 0.9967, and the same detection limit of 200 copies per reaction. These results indicate that the presence of background tissue RNA does not significantly interfere with assay accuracy or sensitivity. Specificity test revealed that the assay exhibits no cross-reactivity with common bacterial or viral agents present in various aquatic organisms. The assay demonstrated high reproducibility and repeatability, with intra-assay and inter-assay coefficients of variation (CVs) below 2.5%. Field sample detection yielded a significantly higher detection rate compared to the conventional PCR assay. The newly developed TaqMan qPCR assay provides a robust diagnostic tool for the efficient and accurate quantitative detection of CAPRV2023 in field samples and surveillance programs.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70072"},"PeriodicalIF":2.2,"publicationDate":"2025-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145549466","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Teresa Pirollo, Ana León, Monica Caffara, Alice Caneschi, Itziar Estensoro, Jinni Gu, Maurizio Scozzoli, Ariadna Sitjà-Bobadilla, Oswaldo Palenzuela
The gill parasite Sparicotyle chrysophrii poses a significant threat to gilthead sea bream (Sparus aurata) aquaculture in the Mediterranean, causing considerable mortality and economic losses. As traditional chemotherapeutic treatments, like formalin, face growing regulatory restrictions, there is an urgent need for alternative control strategies. This study screened the in vitro antiparasitic activity of 16 phytogenic active ingredients (AIs), including essential oils (EOs) and commercial feed additives, against adult S. chrysophrii. Worms were exposed to a range of concentrations of each compound, and mortality was assessed over 24 h. Lethal dose 50% (LD50) values were calculated and categorised by short-, mid-, and long-term efficacy. Several AIs, such as Cinnamomum zeylanicum, Origanum vulgare, Thymus vulgaris, and the commercial formulations Arotec-G and OA + HE+EO, demonstrated rapid and strong toxicity, with low LD50 values observed within 2 h. In addition to lethality, characteristic morphological damage was detected in exposed parasites, indicating a direct and severe parasiticidal effect. These results highlight the high efficacy of various AIs at concentrations significantly lower than those used in standard formalin baths. Overall, the study identifies several promising candidates for the development of alternative treatments against S. chrysophrii, providing a solid scientific basis for future in vivo validation and integration into sustainable parasite control programs in marine aquaculture.
{"title":"Looking for Greener Pastures: In Vitro Screening of Phytogenics for the Control of Sparicotyle chrysophrii in Gilthead Sea Bream.","authors":"Teresa Pirollo, Ana León, Monica Caffara, Alice Caneschi, Itziar Estensoro, Jinni Gu, Maurizio Scozzoli, Ariadna Sitjà-Bobadilla, Oswaldo Palenzuela","doi":"10.1111/jfd.70085","DOIUrl":"https://doi.org/10.1111/jfd.70085","url":null,"abstract":"<p><p>The gill parasite Sparicotyle chrysophrii poses a significant threat to gilthead sea bream (Sparus aurata) aquaculture in the Mediterranean, causing considerable mortality and economic losses. As traditional chemotherapeutic treatments, like formalin, face growing regulatory restrictions, there is an urgent need for alternative control strategies. This study screened the in vitro antiparasitic activity of 16 phytogenic active ingredients (AIs), including essential oils (EOs) and commercial feed additives, against adult S. chrysophrii. Worms were exposed to a range of concentrations of each compound, and mortality was assessed over 24 h. Lethal dose 50% (LD<sub>50</sub>) values were calculated and categorised by short-, mid-, and long-term efficacy. Several AIs, such as Cinnamomum zeylanicum, Origanum vulgare, Thymus vulgaris, and the commercial formulations Arotec-G and OA + HE+EO, demonstrated rapid and strong toxicity, with low LD<sub>50</sub> values observed within 2 h. In addition to lethality, characteristic morphological damage was detected in exposed parasites, indicating a direct and severe parasiticidal effect. These results highlight the high efficacy of various AIs at concentrations significantly lower than those used in standard formalin baths. Overall, the study identifies several promising candidates for the development of alternative treatments against S. chrysophrii, providing a solid scientific basis for future in vivo validation and integration into sustainable parasite control programs in marine aquaculture.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70085"},"PeriodicalIF":2.2,"publicationDate":"2025-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145541094","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Huilin Wang, Xia Gao, Ye Gao, Xiaohan Shang, Jie Li
Turbot (Scophthalmus maximus ) is an economically important farming fish in China. Turbot circovirus (TCV), a recently discovered member of the Circovirus genus within the Circoviridae family, has emerged as a significant threat to the turbot aquaculture industry in China. This virus is the causative agent of turbot acute hemorrhagic disease (TAHD), resulting in substantial economic losses in recent years. As a novel pathogen, the development of more accurate and efficient detection methods for TCV remains an urgent need. In this study, the specific probe and primers were designed based on the consensus sequence of the cap gene of TCV to develop a TaqMan probe-based real-time PCR method for virus detection. The specificity of the assay was validated using turbot reddish body iridovirus (TRBIV), viral nervous necrosis virus (VNNV), the cap gene of European catfish (Silurus glanis ) circovirus (CfCV) and European eel (Anguilla anguilla ) circovirus (EeCV), and no cross-reaction was observed, indicating the high specificity of the established method. The detection limit of this assay was 101 copies per reaction, with an efficiency of 93.7%, a regression squared value of 0.999, and a linear range from 101 copies to 108 copies of TCV DNA. The assay demonstrated high specificity, sensitivity and reproducibility, with both intra- and inter-assay coefficients of variation less than 2.0%. Then 390 clinical samples suspected of TAHD collected from 2019 to 2022 were tested using this method, and all the samples tested positive for TCV. In this study, we established a TaqMan qPCR-based method for TCV detection, which could be applied to epidemiological investigations and pathogenic studies of TCV.
{"title":"Development of a TaqMan-Based Real-Time PCR Assay for the Specific Detection of Turbot Circovirus.","authors":"Huilin Wang, Xia Gao, Ye Gao, Xiaohan Shang, Jie Li","doi":"10.1111/jfd.70084","DOIUrl":"https://doi.org/10.1111/jfd.70084","url":null,"abstract":"<p><p>Turbot (Scophthalmus maximus ) is an economically important farming fish in China. Turbot circovirus (TCV), a recently discovered member of the Circovirus genus within the Circoviridae family, has emerged as a significant threat to the turbot aquaculture industry in China. This virus is the causative agent of turbot acute hemorrhagic disease (TAHD), resulting in substantial economic losses in recent years. As a novel pathogen, the development of more accurate and efficient detection methods for TCV remains an urgent need. In this study, the specific probe and primers were designed based on the consensus sequence of the cap gene of TCV to develop a TaqMan probe-based real-time PCR method for virus detection. The specificity of the assay was validated using turbot reddish body iridovirus (TRBIV), viral nervous necrosis virus (VNNV), the cap gene of European catfish (Silurus glanis ) circovirus (CfCV) and European eel (Anguilla anguilla ) circovirus (EeCV), and no cross-reaction was observed, indicating the high specificity of the established method. The detection limit of this assay was 10<sup>1</sup> copies per reaction, with an efficiency of 93.7%, a regression squared value of 0.999, and a linear range from 10<sup>1</sup> copies to 10<sup>8</sup> copies of TCV DNA. The assay demonstrated high specificity, sensitivity and reproducibility, with both intra- and inter-assay coefficients of variation less than 2.0%. Then 390 clinical samples suspected of TAHD collected from 2019 to 2022 were tested using this method, and all the samples tested positive for TCV. In this study, we established a TaqMan qPCR-based method for TCV detection, which could be applied to epidemiological investigations and pathogenic studies of TCV.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70084"},"PeriodicalIF":2.2,"publicationDate":"2025-11-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145541106","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Goldfish (Carassius auratus) are among the most widely cultured ornamental fish. Skeletal deformities and muscular lesions have been reported in cyprinids, but their aetiology and pathology remain unclear. Advanced diagnostic tools, including radiography, ultrasonography and computed tomography, provide valuable insights when combined with histopathology. This study aimed to characterise clinical, radiological, ultrasonographical, computed tomographical and histopathological features of goldfish with hump-like lesions and muscular cavities caused by Myxobolus lentisuturalis in two farms, and to compare disease manifestations between populations using advanced imaging plus histology. From January 2023 to March 2024, ~10% of fish from two commercial goldfish farms in Tehran Province showed clinical signs. The first group had only hump-like lesions behind the head without exudate, whereas the second also had large muscular cavities with whitish exudate. Thirty goldfish (15 per farm) were sampled. Digital radiography, B-mode ultrasonography, computed tomography (CT/3D-CT), wet smears and histopathological sections were prepared. In the first stock, bilateral crescent-shaped humps containing Myxobolus lentisuturalis spores were observed, with radiographs revealing increased lesion density and obscured swim bladder margins, and ultrasonography indicating muscular hypertrophy with elevated echogenicity. In the second stock, hump-like lesions accompanied by exudates, cavitations, and severe muscular dystrophy were detected, supported by radiographic and CT evidence of deformity, cavitation, and asymmetry. This study demonstrated that M. lentisuturalis infection in goldfish can present with distinct clinical and pathological manifestations, ranging from localised hump-like lesions to extensive muscular cavitation and deformity. The integration of radiography, ultrasonography, CT imaging, and histopathology provided a comprehensive diagnostic approach for characterising disease progression. These findings highlight the importance of advanced imaging modalities in ornamental fish medicine and contribute to a better understanding of myxozoan-associated lesions in cyprinids.
{"title":"From Gross Lesions to 3D-CT: A Multimodal Approach to Diagnosing Myxobolus lentisuturalis Infections in Ornamental Goldfish (Carassius auratus): 2023-2024.","authors":"Hooman Rahmati-Holasoo, Amin Marandi, Hosseinali Ebrahimzadeh Mousavi, Sara Shokrpoor, Sarang Soroori","doi":"10.1111/jfd.70082","DOIUrl":"https://doi.org/10.1111/jfd.70082","url":null,"abstract":"<p><p>Goldfish (Carassius auratus) are among the most widely cultured ornamental fish. Skeletal deformities and muscular lesions have been reported in cyprinids, but their aetiology and pathology remain unclear. Advanced diagnostic tools, including radiography, ultrasonography and computed tomography, provide valuable insights when combined with histopathology. This study aimed to characterise clinical, radiological, ultrasonographical, computed tomographical and histopathological features of goldfish with hump-like lesions and muscular cavities caused by Myxobolus lentisuturalis in two farms, and to compare disease manifestations between populations using advanced imaging plus histology. From January 2023 to March 2024, ~10% of fish from two commercial goldfish farms in Tehran Province showed clinical signs. The first group had only hump-like lesions behind the head without exudate, whereas the second also had large muscular cavities with whitish exudate. Thirty goldfish (15 per farm) were sampled. Digital radiography, B-mode ultrasonography, computed tomography (CT/3D-CT), wet smears and histopathological sections were prepared. In the first stock, bilateral crescent-shaped humps containing Myxobolus lentisuturalis spores were observed, with radiographs revealing increased lesion density and obscured swim bladder margins, and ultrasonography indicating muscular hypertrophy with elevated echogenicity. In the second stock, hump-like lesions accompanied by exudates, cavitations, and severe muscular dystrophy were detected, supported by radiographic and CT evidence of deformity, cavitation, and asymmetry. This study demonstrated that M. lentisuturalis infection in goldfish can present with distinct clinical and pathological manifestations, ranging from localised hump-like lesions to extensive muscular cavitation and deformity. The integration of radiography, ultrasonography, CT imaging, and histopathology provided a comprehensive diagnostic approach for characterising disease progression. These findings highlight the importance of advanced imaging modalities in ornamental fish medicine and contribute to a better understanding of myxozoan-associated lesions in cyprinids.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70082"},"PeriodicalIF":2.2,"publicationDate":"2025-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145482226","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Grass carp (Ctenopharyngodon idellus) is a vital species in China's aquaculture industry but is highly susceptible to grass carp haemorrhagic disease (GCHD) caused by the grass carp reovirus (GCRV). GCRV infection in Ctenopharyngodon idellus kidney cells (CIK) induces reactive oxygen species (ROS) overproduction, triggering oxidative stress. Catalase (Cat) is a crucial antioxidant enzyme that decomposes hydrogen peroxide (H2O2) into H2O and O2. In this study, we investigated and characterised the roles of CiCat in grass carp. CiCat is expressed ubiquitously in all examined tissues. Furthermore, when challenged with GCRV, its expression levels are significantly upregulated. Fluorescence analysis revealed that CiCat exhibits a widespread cellular distribution, while GCRV infection enhances its aggregation and co-localisation with mitochondria (Mit) and endoplasmic reticulum (ER). Overexpression of CiCat eliminates both H2O2 and GCRV-induced ROS, decreases the expression of antioxidant enzymes and promotes GCRV replication. Further research showed that overexpression of interferon regulatory factor-7 (IRF-7) inhibits GCRV replication, but CiCat reduces IRF-7 expression. In summary, CiCat promotes GCRV replication by reducing CiIRF-7 expression.
{"title":"Grass Carp Catalase Inhibits Interferon Regulatory Factor-7 to Promote Grass Carp Reovirus Replication.","authors":"Jinglong Wang, Lu Yan, Junru Wang","doi":"10.1111/jfd.70076","DOIUrl":"https://doi.org/10.1111/jfd.70076","url":null,"abstract":"<p><p>Grass carp (Ctenopharyngodon idellus) is a vital species in China's aquaculture industry but is highly susceptible to grass carp haemorrhagic disease (GCHD) caused by the grass carp reovirus (GCRV). GCRV infection in Ctenopharyngodon idellus kidney cells (CIK) induces reactive oxygen species (ROS) overproduction, triggering oxidative stress. Catalase (Cat) is a crucial antioxidant enzyme that decomposes hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>) into H<sub>2</sub>O and O<sub>2</sub>. In this study, we investigated and characterised the roles of CiCat in grass carp. CiCat is expressed ubiquitously in all examined tissues. Furthermore, when challenged with GCRV, its expression levels are significantly upregulated. Fluorescence analysis revealed that CiCat exhibits a widespread cellular distribution, while GCRV infection enhances its aggregation and co-localisation with mitochondria (Mit) and endoplasmic reticulum (ER). Overexpression of CiCat eliminates both H<sub>2</sub>O<sub>2</sub> and GCRV-induced ROS, decreases the expression of antioxidant enzymes and promotes GCRV replication. Further research showed that overexpression of interferon regulatory factor-7 (IRF-7) inhibits GCRV replication, but CiCat reduces IRF-7 expression. In summary, CiCat promotes GCRV replication by reducing CiIRF-7 expression.</p>","PeriodicalId":15849,"journal":{"name":"Journal of fish diseases","volume":" ","pages":"e70076"},"PeriodicalIF":2.2,"publicationDate":"2025-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145482295","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}