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Tissue clearing and three-dimensional imaging of intact tissues: a review on FACT protocol. 完整组织的组织清除和三维成像:FACT 方案综述。
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-05-16 DOI: 10.1080/01478885.2024.2352695
Zohreh Farrar, Alireza Afshar, Afshin Zare, Nadiar M Mussin, Asset A Kaliyev, Kulyash R Zhilisbayeva, Mahdi Mahdipour, Amin Tamadon

FACT is a developed technique for clearing tissues that does not use acrylamide. Since the removal of lipids is crucial for transparency and efficient antibody staining throughout the tissue, especially for microscopy and imaging, it is a harmful process that can cause the loss of important biological molecules such as proteins. The FACT technique overcomes this by chemically bonding the membrane and intracellular proteins with the extracellular matrix, creating a massive 3D hydrogel matrix and providing structural support to fortify the tissue during processing. Compared to other acrylamide-based techniques, the FACT technique requires less labor and harmful chemicals and is therefore considered a more suitable option. In this study, we describe the complete FACT protocol for antibody staining and imaging of whole-cleared tissues while preserving structure and improving image quality. The protocol includes tissue perfusion, fixation, clearing, antibody staining, refractive index matching (RIM) (), microscopy, and imaging. The timing for each step varies depending on the size, weight, and type of tissue, as well as the type of immunostaining. We provide an example of the FACT protocol using mouse brain tissue, which demonstrates its suitability for molecular interrogation analysis of large tissues. The FACT technique has been successfully performed on different types of tissues, making it a favorable choice for a variety of applications.

FACT 是一种不使用丙烯酰胺的组织清理技术。由于去除脂质对整个组织的透明度和高效抗体染色至关重要,尤其是在显微镜和成像方面,因此这是一个有害的过程,会导致蛋白质等重要生物分子的损失。FACT 技术克服了这一问题,它通过化学方法将膜和细胞内蛋白质与细胞外基质结合在一起,形成一个巨大的三维水凝胶基质,并在加工过程中提供结构支撑以加固组织。与其他基于丙烯酰胺的技术相比,FACT 技术所需的劳动力和有害化学物质更少,因此被认为是更合适的选择。在本研究中,我们介绍了完整的 FACT 方案,用于对整体清除的组织进行抗体染色和成像,同时保留组织结构并提高图像质量。该方案包括组织灌注、固定、清除、抗体染色、折射率匹配(RIM)()、显微镜检查和成像。每个步骤的时间取决于组织的大小、重量和类型以及免疫染色的类型。我们提供了一个使用小鼠脑组织的 FACT 方案示例,证明该方案适用于大型组织的分子检测分析。FACT 技术已成功应用于不同类型的组织,因此是各种应用的有利选择。
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引用次数: 0
What will it take for histologists to be recognized under CLIA? 组织学家如何才能获得 CLIA 的认可?
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-09-01 Epub Date: 2024-08-30 DOI: 10.1080/01478885.2024.2391636
Elizabeth Chlipala, Tim Morken, Clare Thornton, Luis Chiriboga
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引用次数: 0
Increase of KLK7, cytokeratin 5/6, and elafin expression in head and neck squamous cell carcinoma compared with lung squamous cell carcinoma. 与肺鳞癌相比,头颈部鳞癌中 KLK7、细胞角蛋白 5/6 和 elafin 的表达增加。
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-06-01 Epub Date: 2024-01-08 DOI: 10.1080/01478885.2023.2301123
Angelin Shanmugam, JoAnna Rudasill, Sheila Criswell

Squamous cell carcinoma is the most common primary tumor in the head and neck epithelium and is the second most common primary tumor type in the lung. Although morphologically indistinguishable from each other with hematoxylin and eosin stain on histology, the tumors have different protein expression profiles. Using 24 formalin-fixed paraffin embedded squamous cell carcinomas of the lung and 24 squamous cell carcinomas in the head and neck, protein expression for cytokeratin 5/6, kallikrein 7, and elafin was evaluated by immunohistochemistry. All three proteins were found to evidence higher expression in head and neck squamous cell carcinoma as compared with that of squamous cell carcinoma of the lung. The differences in expression may help clinical differentiation between primary tumors of the lung from metastatic tumors to the lung from the oral/laryngeal cavities.

鳞状细胞癌是头颈部上皮最常见的原发性肿瘤,也是肺部第二常见的原发性肿瘤类型。虽然在组织学上用苏木精和伊红染色法可以从形态上区分它们,但这两种肿瘤的蛋白质表达谱却各不相同。利用 24 例福尔马林固定石蜡包埋的肺部鳞状细胞癌和 24 例头颈部鳞状细胞癌,通过免疫组化方法评估了细胞角蛋白 5/6、胰激肽原 7 和 elafin 的蛋白表达情况。结果发现,与肺部鳞状细胞癌相比,头颈部鳞状细胞癌中这三种蛋白的表达量都较高。表达的差异可能有助于临床区分肺部原发性肿瘤和从口腔/喉腔转移到肺部的肿瘤。
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引用次数: 0
Runx1 alleviates osteoarthritis progression in aging mice. Runx1缓解衰老小鼠骨关节炎的进展。
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-06-01 Epub Date: 2023-11-15 DOI: 10.1080/01478885.2023.2281790
Haoran Chen, Caixia Pi, Mingyang Chen, Xinmei Du, Yujia Cui, Demao Zhang, Qiang Guo, Jing Xie, Xuedong Zhou

With rates growing quickly with age, osteoarthritis (OA) is the most common cause of chronic disability in aging persons. The discomfort and reduced motion associated with osteoarthritis have a significant impact on quality of life, and there is no known solution. Runt-related transcription factor 1(Runx1) has been shown to play a protective role in the development of osteoarthritis by promoting chondrogenesis. We had created models of ageing mice with osteoarthritis by anterior cruciate ligament transection (ACLT) and analyzed the effects of intra-articular injection of adeno-associated virus/Runx1 (AAV/Runx1) on the models. The results showed that the AAV/Runx1-group maintained better articular cartilage integrity and retained more proteoglycan than the OA group after injection of AAV-Runx1. The markers related to pathological changes in cartilage were downregulated, while the markers related to physiological changes in cartilage were upregulated. This suggests that Runx1 may impede OA progression on the knee joint of ageing mice, potentially playing a protective role in OA and becoming a probable treatment target for osteoarthritis among ageing patients in the future.

随着年龄的增长,骨关节炎(OA)的发病率迅速增长,是老年人慢性残疾的最常见原因。与骨关节炎相关的不适和运动减少对生活质量有重大影响,并且没有已知的解决方案。runt相关转录因子1(Runx1)已被证明通过促进软骨形成在骨关节炎的发展中发挥保护作用。采用前交叉韧带横断法(ACLT)建立了老龄骨关节炎小鼠模型,并分析了关节内注射腺相关病毒/Runx1 (AAV/Runx1)对模型的影响。结果显示,注射AAV- runx1后,AAV/ runx1组比OA组保持了更好的关节软骨完整性,保留了更多的蛋白多糖。与软骨病理变化相关的标志物下调,而与软骨生理变化相关的标志物上调。这表明Runx1可能会阻碍衰老小鼠膝关节的OA进展,可能在OA中发挥保护作用,并可能成为未来老年患者骨关节炎的治疗靶点。
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引用次数: 0
GW1929 (an agonist of PPARγ) inhibits excessive production of reactive oxygen species in cisplatin-stimulated renal tubular epithelial cells, hampers cell apoptosis, and ameliorates renal injury. GW1929(一种PPARγ激动剂)抑制顺铂刺激的肾小管上皮细胞中活性氧的过量产生,阻碍细胞凋亡,并改善肾损伤。
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-06-01 Epub Date: 2023-11-29 DOI: 10.1080/01478885.2023.2286692
Yong He, Caihong Hu, Xin Zhang

Cisplatin-induced nephrotoxicity has long been explored for development of preventative and therapeutic drugs. The current investigation focused on the renal protective effect of GW1929, an agonist for peroxisome proliferator-activated receptors gamma (PPARγ), on cisplatin-induced kidney injury. HK2 cells treated with 20 μM cisplatin and C57BL/6 mice injected with 20 mg/kg cisplatin were used as the cell model and animal model for acute kidney injury. HK2 cell viability after cisplatin or GW1929 (0-80 μM) treatment was tested using methyl thiazolyl tetrazolium assays. Flow cytometry analysis and TUNEL assays were used to measure cell apoptosis. Intracellular reactive oxygen species (ROS) level was measured through fluorescence intensities. Levels of blood urea nitrogen (BUN) and serum creatinine (SCr) were measured to evaluate the renal function of mice. For renal morphology observation and cell apoptosis assessment in vivo, hematoxylin-eosin staining and TUNEL assays were conducted. The concentrations of oxidative stress markers in renal samples were measured using colorimetric tests. It was found that GW1929 dose-dependently enhanced protein levels of PPARγ, PGC-1α and TFEB in HK2 cells. Meanwhile, intracellular ROS overproduction, the decrease in cell viability and excessive cell apoptosis mediated by cisplatin were reversed by GW1929. For in vivo experiments, GW1929 notably attenuated cisplatin-stimulated nephrotoxicity and oxidative stress while reducing BUN and Scr levels in cisplatin-challenged model mice. Moreover, GW1929 significantly dampened renal cell apoptosis in vivo. GW1929 mitigates renal tubular epithelial cell injury and renal damage by inhibiting oxidative stress and renal cell apoptosis.

长期以来,人们一直在探索顺铂引起的肾毒性,以开发预防和治疗药物。目前的研究主要集中在GW1929的肾脏保护作用,GW1929是一种过氧化物酶体增殖物激活受体γ (PPARγ)的激动剂,对顺铂诱导的肾损伤。以20 μM顺铂处理的HK2细胞和20 mg/kg顺铂注射的C57BL/6小鼠作为急性肾损伤的细胞模型和动物模型。采用甲基噻唑四氮唑法检测顺铂或GW1929 (0-80 μM)处理后的HK2细胞活力。流式细胞术和TUNEL法检测细胞凋亡。通过荧光强度测定细胞内活性氧(ROS)水平。测定血尿素氮(BUN)和血清肌酐(SCr)水平,评价小鼠肾功能。采用苏木精-伊红染色法和TUNEL法观察小鼠肾脏形态和体内细胞凋亡情况。用比色法测定肾样品中氧化应激标志物的浓度。结果发现GW1929剂量依赖性地提高HK2细胞中PPARγ、PGC-1α和TFEB的蛋白水平。同时,GW1929可逆转顺铂介导的细胞内ROS过度生成、细胞活力下降和细胞过度凋亡。在体内实验中,GW1929显著减轻顺铂刺激的肾毒性和氧化应激,同时降低顺铂刺激模型小鼠的BUN和Scr水平。此外,GW1929在体内显著抑制肾细胞凋亡。GW1929通过抑制氧化应激和肾细胞凋亡减轻肾小管上皮细胞损伤和肾损伤。
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引用次数: 0
A challenging case of sclerosing polycystic adenoma of the parotid gland: a case report and brief review of the latest updates. 一例具有挑战性的腮腺硬化性多囊腺瘤:病例报告和最新进展简评。
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-06-01 Epub Date: 2024-01-15 DOI: 10.1080/01478885.2023.2299911
Radwa Rashad, Abdelrahman Barakat

Sclerosing polycystic adenoma (SPA) is a rare neoplastic salivary gland lesion with only about 100 cases reported worldwide so far. The lesion is confused with several malignant and other benign tumors such as apocrine intraductal carcinoma (IC), salivary duct carcinoma (SDC), chronic sclerosing sialadenitis, polycystic dysgenetic disease (PDD), pleomorphic adenoma (PA), acinic cell carcinoma (ACC), and mucoepidermoid carcinoma (MEC). We present a case of SPA for a 23-year-old male patient presenting with a slowly growing parotid mass. Fine needle aspiration (FNA) followed by total excision of the tumor was performed and the picture was consistent with SPA. We discuss the findings of the case and briefly review the literature on SPA.

硬化性多囊腺瘤(SPA)是一种罕见的唾液腺肿瘤性病变,迄今为止全世界仅报道了约 100 例。该病变与多种恶性肿瘤和其他良性肿瘤相混淆,如分泌腺导管内癌(IC)、唾液腺导管癌(SDC)、慢性硬化性唾液腺炎、多囊遗传病(PDD)、多形性腺瘤(PA)、尖细胞癌(ACC)和粘液表皮样癌(MEC)。我们报告了一例腮腺肿块生长缓慢的 23 岁男性 SPA 患者。对肿瘤进行了细针穿刺(FNA)和全切除术,结果与 SPA 一致。我们讨论了该病例的研究结果,并简要回顾了有关 SPA 的文献。
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引用次数: 0
Using machine learning for chemical-free histological tissue staining 利用机器学习进行无化学物质组织染色
IF 1.1 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-04-22 DOI: 10.1080/01478885.2024.2338585
Julie A. Renner, Patrick C. Riley
Hematoxylin and eosin staining can be hazardous, expensive, and prone to error and variability. To circumvent these issues, artificial intelligence/machine learning models such as generative advers...
苏木精和伊红染色既危险又昂贵,而且容易出错和出现变异。为了规避这些问题,人工智能/机器学习模型(如生成式逆向学习模型)可用于解决这些问题。
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引用次数: 0
Molecular surgical pathology, 2nd edition 分子外科病理学,第 2 版
IF 1.1 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-04-16 DOI: 10.1080/01478885.2024.2343180
Stephen K. Lau
Published in Journal of Histotechnology (Ahead of Print, 2024)
发表于《组织技术杂志》(2024 年提前出版)
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引用次数: 0
A rapid and simple procedure for the whole-mount bone staining of small fish 小鱼整块骨染色的快速简便程序
IF 1.1 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-04-12 DOI: 10.1080/01478885.2024.2339452
Narawadee Yeesan, Chanyut Sudtongkong, Supparat Kong-Oh, Kitipong Angsujinda, Jes Kettratad, Pisit Poolprasert, Atsuo Iida, Piyakorn Boonyoung, Korakot Nganvongpanit, Anan Kenthao, Gen Kaneko, Sinlapachai Senarat
The cartilage and bone structure has provided insightful knowledge about evolution and ecology of fish, which is an important component of biological oceanography. However, the whole-body bone stai...
软骨和骨骼结构提供了有关鱼类进化和生态学的深刻知识,是生物海洋学的重要组成部分。然而,全身骨骼的...
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引用次数: 0
The presence of H. pylori in laparoscopic sleeve gastrectomy specimens is associated with increased mucosal thickness, presence of secondary follicles, increased chronic inflammation, and intestinal metaplasia. 腹腔镜袖状胃切除术标本中幽门螺杆菌的存在与粘膜厚度增加、次级卵泡存在、慢性炎症增加和肠化生有关。
IF 1.8 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-03-01 Epub Date: 2023-10-12 DOI: 10.1080/01478885.2023.2265601
Danielle Grant, Chelsea Peeler, JoAnna Rudasill, Cynthia Lazar, Amanda Bodkin, Sheila L Criswell

Helicobacter pylori is putatively present in over half of the global human population and is recognized as a carcinogenic agent that increases the likelihood of infected patients developing gastric adenocarcinoma or gastric lymphoma. Although there are several means for testing for H. pylori, the gold standard remains the invasive histologic evaluation. The current most popular form of bariatric surgery is the laparoscopic sleeve gastrectomy (LSG) and is the only bariatric surgery which supplies a specimen for histologic evaluation. While non-invasive testing is effective in diagnosing and monitoring H. pylori infection, histological examination of biopsies and resections is the only way to grade chronic inflammation and evaluate specimens for additional pathologies such as intestinal metaplasia. The investigators evaluated 203 sequential LSG specimens collected from a major metropolitan hospital over the period of one year. Specimens were processed to paraffin, stained with hematoxylin and eosin, alcian blue, and immunohistochemistry to determine the presence of H. pylori, chronic inflammation, presence of secondary lymphoid follicles in the mucosa, mucosal thickness, and presence of intestinal metaplasia. Statistical analyses demonstrated a significant positive correlation among all factors examined. The overall positivity rate of H. pylori in LSG specimens was 18.2% but ranged from 6.9-23.8% depending on whether the treating clinician performed routine pre-surgical endoscopy. The presence of H. pylori was associated with a higher average chronic inflammation grade, intestinal metaplasia, thicker mucosa, and presence of lymphoid follicles with germinal centers in the mucosa.

幽门螺杆菌被认为存在于全球一半以上的人口中,被认为是一种致癌因素,会增加感染患者患胃腺癌或胃淋巴瘤的可能性。尽管有几种检测幽门螺杆菌的方法,但金标准仍然是侵入性组织学评估。目前最流行的减肥手术是腹腔镜袖状胃切除术(LSG),也是唯一一种提供组织学评估样本的减肥手术。虽然非侵入性检测在诊断和监测幽门螺杆菌感染方面是有效的,但活检和切除的组织学检查是对慢性炎症进行分级和评估标本是否存在肠化生等其他病理的唯一方法。研究人员评估了一年内从一家大城市医院采集的203份LSG序列标本。将标本处理成石蜡,用苏木精和伊红、阿尔西安蓝和免疫组织化学染色,以确定幽门螺杆菌的存在、慢性炎症、粘膜中次级淋巴滤泡的存在、粘膜厚度和肠化生的存在。统计分析表明,所有被检查的因素之间存在显著的正相关。LSG标本中幽门螺杆菌的总体阳性率为18.2%,但范围为6.9-23.8%,这取决于治疗临床医生是否进行了常规术前内窥镜检查。幽门螺杆菌的存在与较高的平均慢性炎症分级、肠化生、较厚的粘膜以及在粘膜中存在具有生发中心的淋巴滤泡有关。
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引用次数: 0
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Journal of Histotechnology
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