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Resolving the bone - optimizing decalcification in spatial transcriptomics and molecular pathology.
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-26 DOI: 10.1080/01478885.2024.2446038
Shuoshuo Wang

Bone tissue poses critical roadblocks for spatial transcriptomics and molecular pathology due to a combination of its dense, calcified matrix and inadequate preservation of biomolecules in conventional decalcification. Decalcification is a complex and nuanced histological process to concomitantly preserve nucleic acids, proteins, and tissue architecture, ensuring molecular integrity for downstream assays. However, commonly used agents like formic and hydrochloric acids, while efficient, can degrade biomolecules to varying extents, complicating assays such as PCR, sequencing, immunohistochemistry, and in situ hybridization. Advances in spatial transcriptomics, both sequencing- and imaging-based, emphasize the importance of optimizing decalcification protocols to improve research outcomes. This synoptic and perspective article explores traditional and modern decalcification methods, offering recommendations on technical and methodological refinements for achieving molecularly robust processing of bone and calcified tissues in spatial transcriptomics and molecular pathology.

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引用次数: 0
Optimizing tissue adherence on glass slides using polyurethane glue: a new slide preparation method.
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-17 DOI: 10.1080/01478885.2024.2440679
Jeffery T Williams, Tracy A Goodpaster, Miki Haraguchi

The application of Clear Gorilla Glue® household adhesive to microscope slides has been found to enhance the mounting and retention of traditionally difficult tissue types, notably bone and tooth specimens. Improvement in end results were observed across H&E staining, immunohistochemistry, and in situ hybridization.

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引用次数: 0
Multiple levels of Gomori methenamine silver (GMS) stains do not improve diagnostic yield in esophageal biopsies.
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-12 DOI: 10.1080/01478885.2024.2437587
Michael Occidental, Andrew Dunn, Aaron R Huber

Gomori methenamine silver (GMS) stains are commonly utilized to exclude fungal esophagitis in esophageal biopsies. Our laboratory protocol for special stains, including GMS, stipulates that two levels be performed for each stain. We retrospectively reviewed 127 esophageal biopsies which had GMS stains performed; there were 62 GMS-positive and 65 GMS-negative cases. Sixty-one of the positive cases (98%) had fungal organisms present on all levels. Only one case showed fungal elements on the first, but not the second, level. Given national laboratory staff shortages, performing levels for special stains may be unnecessary, inefficient, and time consuming in the surgical pathology laboratory.

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引用次数: 0
Optimizing immunofluorescent staining of H vessels within an irradiated fracture callus in paraffin-embedded tissue samples. 优化石蜡包埋组织样本中辐照骨折茧内 H 血管的免疫荧光染色。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-01 Epub Date: 2024-07-03 DOI: 10.1080/01478885.2024.2371060
Nathan T Sheppard, Melissa C Daniel, Noah S Nelson, Alexis Donneys, Steven R Buchman

H vessels are an essential link in angiogenic-osteogenic coupling and orchestrate the process of bone healing. H vessels are critically deficient in the setting of radiation-induced fractures, which have been reported to occur in up to 25% of patients undergoing radiotherapy. By increasing H-vessel proliferation, Deferoxamine (DFO) revitalizes the physiologic response to skeletal injury and accelerates irradiated fracture repair. H-vessel quantification is therefore an important outcome measure in histologic analysis of bone healing. However, an optimized protocol for staining H vessels in formalin-fixed paraffin-embedded (FFPE) tissue sections has not been reported. With this protocol, we describe a method of staining FFPE bone samples with minimal background fluorescence and high signal-to-noise ratio. We examined mandibular specimens in a rat model of bone healing from a range of fracture conditions, including healthy bone (Fx), irradiated bone (XFx), and irradiated bone with DFO treatment (XFx-DFO). Quantitative analysis revealed a significant increase of H vessels in the XFxDFO group compared to both the Fx and XFx groups. By optimizing immunofluorescent staining of H vessels in FFPE samples across a range of fracture conditions, we offer investigators an efficacious means of producing reliable imaging for quantitative analysis of H vessels in an irradiated fracture callus.

H血管是血管生成-骨生成耦合的重要环节,并协调着骨愈合的过程。据报道,在接受放疗的患者中,高达 25% 的患者会因辐射诱发骨折而严重缺乏 H 血管。通过增加 H 血管的增殖,去铁胺(DFO)可重振骨骼损伤的生理反应,加速辐照骨折的修复。因此,H-血管定量是骨愈合组织学分析的一项重要结果测量指标。然而,在福尔马林固定石蜡包埋(FFPE)组织切片中染色 H 血管的优化方案尚未见报道。通过该方案,我们描述了一种染色 FFPE 骨样本的方法,其背景荧光最少,信噪比高。我们对大鼠骨愈合模型中的下颌骨标本进行了检查,这些标本来自一系列骨折情况,包括健康骨(Fx)、辐照骨(XFx)和经 DFO 处理的辐照骨(XFx-DFO)。定量分析显示,与 Fx 组和 XFx 组相比,XFxDFO 组的 H 血管明显增加。通过在各种骨折条件下对 FFPE 样品中的 H 血管进行免疫荧光染色优化,我们为研究人员提供了一种有效的方法,可对辐照骨折胼胝体中的 H 血管进行可靠的成像定量分析。
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引用次数: 0
Comparative analysis of in vivo bio-integration of three hyaluronic acid-based fillers for 26 weeks: a histological study. 三种透明质酸类填充剂 26 周体内生物整合比较分析:组织学研究。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-01 Epub Date: 2024-07-18 DOI: 10.1080/01478885.2024.2369967
Baoji Song, Qiqi Chen

Stabilized hyaluronic acid (HA), produced through diverse cross-linking technology and formulated as an injectable gel, has found widespread utilization in aesthetic industry. Cross-linked HA essentially constitutes a gel particle composition formed by numerous viscoelastic particulates. Various product formulations yield HA gels with distinct properties, including particle size, viscoelasticity, and interaction forces between particles. While previous studies have primarily concentrated on the biological safety and macroscopic expression of fillers, limited research exists on the internal mechanisms governing their macro-performance. This study selected three common dermal fillers for analysis, establishing an animal model to assess their in vivo interaction with surrounding tissues and explore their internal mechanisms. The findings revealed that particle size plays a crucial role in tissue integration.

稳定透明质酸(HA)通过不同的交联技术生产,并配制成可注射凝胶,已在美容行业得到广泛应用。交联透明质酸本质上是由许多粘弹性颗粒组成的凝胶颗粒成分。各种产品配方产生的 HA 凝胶具有不同的特性,包括颗粒大小、粘弹性和颗粒间的相互作用力。以往的研究主要集中在填充剂的生物安全性和宏观表现上,而对其宏观性能的内部机制研究有限。本研究选择了三种常见的皮肤填充剂进行分析,通过建立动物模型来评估它们在体内与周围组织的相互作用,并探索其内部机制。研究结果表明,颗粒大小在组织整合中起着至关重要的作用。
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引用次数: 0
Novel processing and staining methodology of bottlenose dolphin (Tursiops truncatus) teeth for age determination. 用于年龄测定的瓶鼻海豚(Tursiops truncatus)牙齿新处理和染色方法。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-01 Epub Date: 2024-03-11 DOI: 10.1080/01478885.2024.2327155
Christa E Barrett, Ian Evans, Timothy Morgan, Alicia K Olivier

Age determination of bottlenose dolphins (Tursiops truncatus) is a critical tool in understanding both individual and population health. There are many methods of aging bottlenose dolphins including analysis of teeth, pectoral flipper radiographs, and epigenetics. The most common and oldest method for aging toothed cetaceans is the counting of growth layer groups (GLGs) in the teeth. Current techniques have technical and repeatability challenges. Therefore, a processing technique that results in better resolution of GLGs is needed. This study compares different decalcifications and different histochemical staining techniques. Decalcification was done using 10% EDTA, Kristensen's decalcification, and Rapid Decalcification Solution (RDO). Following decalcification and routine processing, GLGs were assessed using Hematoxylin and Eosin (H&E), hematoxylin, Giemsa, Wright-Giemsa, Toluidine Blue (T-Blue), Masson's Trichrome, and Congo Red staining techniques. Decalcification with Kristensen's and staining with Masson's Trichrome and Congo Red were determined to best highlight GLGs. This processing and staining was then applied to a sample population of 102 bottlenose dolphins that were evaluated independently and blindly by two observers. Of the 102 dolphin samples, 13 (12.7%) were unable to age due to no clear distinction or distortion between GLGs.

瓶鼻海豚(Tursiops truncatus)的年龄测定是了解个体和群体健康状况的重要工具。瓶鼻海豚的年龄测定方法有很多,包括分析牙齿、胸鳍X光片和表观遗传学。最常见、最古老的齿鲸老化方法是计算牙齿中的生长层群(GLGs)。目前的技术在技术和可重复性方面存在挑战。因此,需要一种能更好地解析 GLGs 的处理技术。本研究比较了不同的脱钙方法和不同的组织化学染色技术。脱钙采用10% EDTA、克里斯滕森脱钙法和快速脱钙液(RDO)。脱钙和常规处理后,使用苏木精和伊红(H&E)、苏木精、Giemsa、Wright-Giemsa、甲苯胺蓝(T-Blue)、Masson 三色和刚果红染色技术对 GLG 进行评估。克里斯滕森氏脱钙法和马森三色染色法及刚果红染色法被认为最能突出 GLGs。随后,两名观察员对 102 头瓶鼻海豚样本进行了独立、盲测的处理和染色。在 102 头海豚样本中,有 13 头(12.7%)因 GLGs 之间没有明显区别或变形而无法鉴定年龄。
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引用次数: 0
Addressing the histotechnologist shortage through improved classification and recognition. 通过改进分类和识别,解决组织技术人员短缺问题。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-12-01 Epub Date: 2024-11-04 DOI: 10.1080/01478885.2024.2424049
Henley Marcelus, Daniel Packert
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引用次数: 0
C5aR expression in kidney tubules, macrophages and fibrosis. 肾小管、巨噬细胞和纤维化中的 C5aR 表达。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-11-28 DOI: 10.1080/01478885.2024.2430041
Carolyn Dunlap, Niky Zhao, Linda S Ertl, Thomas J Schall, Kathleen M C Sullivan

The anaphylatoxin C5a and its receptor C5aR (CD88) are complement pathway effectors implicated in renal diseases, including ANCA-associated vasculitis. We investigated the kidney expression of C5aR and a second C5a receptor C5L2 by using immunohistochemistry, in situ hybridization, and spatial gene expression on formalin-fixed, paraffin-embedded human and mouse kidney. C5aR was detected on interstitial macrophages and in multiple tubular regions, including distal and proximal; C5L2 had a similar expression pattern. The 5/6 nephrectomy model of chronic kidney injury exhibited increased C5aR expression by infiltrating cells within the fibrotic regions. C5aR expression was confirmed on human leukocytes and in vitro differentiated macrophages by flow cytometry, and treatment with C5a induced the expression of chemokines and remodeling factors by macrophages, including CCL-3/-4/-7, -20, MMP-1/-3/-8/-12, and F3, and promoted leukocyte survival. C5a activity was C5aR dependent, as demonstrated by reversal with the C5aR inhibitor avacopan. Collectively, these results suggest that myeloid C5aR may induce excessive inflammation in the kidney via immune cell recruitment, extracellular matrix destruction, and remodeling, resulting in fibrotic tissue deposition.

肾脏疾病(包括 ANCA 相关性血管炎)与补体途径效应因子 C5a 及其受体 C5aR(CD88)有关。我们采用免疫组化、原位杂交和空间基因表达等方法,对福尔马林固定、石蜡包埋的人和小鼠肾脏中 C5aR 和第二种 C5a 受体 C5L2 的表达进行了研究。在间质巨噬细胞和多个肾小管区域(包括远端和近端)都检测到了 C5aR;C5L2 也有类似的表达模式。5/6肾切除术慢性肾损伤模型显示,纤维化区域内浸润细胞的C5aR表达增加。流式细胞术证实了人类白细胞和体外分化巨噬细胞中 C5aR 的表达,C5a 可诱导巨噬细胞表达趋化因子和重塑因子,包括 CCL-3/-4/-7、-20、MMP-1/-3/-8/-12 和 F3,并促进白细胞存活。C5a 活性依赖于 C5aR,C5aR 抑制剂 avacopan 可逆转 C5a 活性。总之,这些结果表明,骨髓 C5aR 可通过免疫细胞招募、细胞外基质破坏和重塑诱发肾脏过度炎症,导致纤维组织沉积。
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引用次数: 0
Low-magnitude high-frequency vibration ameliorates high glucose-induced endothelial injury by restoring mitochondrial function via AMPK/mTOR pathway. 低幅高频振动通过 AMPK/mTOR 途径恢复线粒体功能,从而改善高血糖诱导的内皮损伤。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-11-20 DOI: 10.1080/01478885.2024.2429855
Xidan Zhang, Jiyu Sun, Xiting Zhu, Zhenghao Yang, Zhuoli Zhu, Min Zhou, Chen Li, Haiyang Yu, Xueqi Gan

High glucose-induced dysfunction of endothelial cells is a critical and initiating factor in the genesis of diabetic vascular complications. Low-magnitude high-frequency vibration (LMHFV) is a non-invasive biophysical intervention. It has been reported that it exhibits protective effects on high glucose-induced osteoblast dysfunction, but little was known on diabetic vascular complications. In this work, we aim to clarify the role of LMHFV on high glucose-induced endothelial dysfunction and hypothesized that the protective effects functioned through adenosine monophosphate-activated protein kinase (AMPK)/mammalian target of rapamycin (mTOR) pathway. We cultured primary murine aortic endothelial cells (MAECs) in normal or HG medium, respectively, before exposing to LMHFV. The tube formation, paracellular permeability assay, and aortic ring sprouting assay showed that the high glucose injured-function of MAECs was improved after LMHFV treatment. The intracellular ROS generation analysis, mitochondrial complex I activities measurement, ATP measurement and mitochondrial membrane potential (MMP), and mitochondrial ROS generation analysis of MAECs indicated that mitochondrial function was restored by LMHFV loading in a high glucose environment. Mechanically, western blot assays showed that AMPK phosphorylation was promoted and mTOR was inhibited in LMHFV-induced endothelial function restoration. After the administration of the AMPK inhibitor, Compound C, these protective effects resulting from LMHFV are reversed. These findings suggest that LMHFV plays a significant role in protecting endothelial cells' function and mitochondrial function in high glucose-induced injured MAECs via AMPK/mTOR signalling.

高血糖引起的内皮细胞功能障碍是糖尿病血管并发症发生的关键和起始因素。低幅高频振动(LMHFV)是一种非侵入性生物物理干预措施。据报道,它对高糖诱导的成骨细胞功能障碍有保护作用,但对糖尿病血管并发症却知之甚少。在这项研究中,我们旨在阐明 LMHFV 对高血糖诱导的内皮功能障碍的作用,并假设其保护作用是通过单磷酸腺苷激活蛋白激酶(AMPK)/哺乳动物雷帕霉素靶标(mTOR)途径发挥的。我们分别在正常或 HG 培养基中培养原代小鼠主动脉内皮细胞(MAECs),然后将其暴露于 LMHFV。管形成、细胞旁通透性试验和主动脉环萌发试验表明,LMHFV处理后,MAECs的高糖损伤功能得到了改善。对 MAECs 进行的细胞内 ROS 生成分析、线粒体复合物 I 活性测定、ATP 测定和线粒体膜电位(MMP)测定以及线粒体 ROS 生成分析表明,LMHFV 负载可恢复高糖环境下的线粒体功能。从机理上讲,Western 印迹分析表明,在 LMHFV 诱导的内皮功能恢复过程中,AMPK 磷酸化被促进,mTOR 被抑制。施用 AMPK 抑制剂化合物 C 后,LMHFV 产生的这些保护作用被逆转。这些发现表明,LMHFV 通过 AMPK/mTOR 信号在高糖诱导的损伤 MAEC 中保护内皮细胞功能和线粒体功能方面发挥了重要作用。
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引用次数: 0
Diagnostic yield of stains for infectious organisms in esophageal or gastroesophageal junction biopsies with esophagitis. 食管炎食管或胃食管交界处活检中感染性生物体染色的诊断率。
IF 0.6 4区 生物学 Q4 CELL BIOLOGY Pub Date : 2024-10-14 DOI: 10.1080/01478885.2024.2415154
Aaron R Huber, Christa L Whitney-Miller

Stains frequently performed to exclude infectious etiologies in esophagitis include Grocott methenamine silver (GMS) and periodic acid-Schiff (PAS) as well as immunohistochemistry (IHC) assays for cytomegalovirus (CMV) and herpes simplex virus (HSV). The diagnostic yield of these tests, in this situation, has not been well studied. We retrospectively reviewed 261 esophageal biopsies, which had one or more of the above tests performed. The diagnostic yield for GMS and PAS was 8%, while CMV and HSV immunohistochemistry had a diagnostic yield of 1% and 0%, respectively. Our study suggests that routine use of ancillary labeling techniques in esophagitis biopsies may be of limited utility and have low diagnostic yield.

为排除食管炎的感染性病因而经常进行的染色包括 Grocott methenamine silver (GMS) 和 periodic acid-Schiff (PAS),以及巨细胞病毒 (CMV) 和单纯疱疹病毒 (HSV) 的免疫组化 (IHC) 检测。在这种情况下,这些检测方法的诊断率还没有得到很好的研究。我们对 261 例食管活检进行了回顾性研究,这些活检进行了上述一种或多种检测。GMS和PAS的诊断率为8%,而CMV和HSV免疫组化的诊断率分别为1%和0%。我们的研究表明,在食管炎活检中常规使用辅助标记技术可能作用有限,诊断率较低。
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引用次数: 0
期刊
Journal of Histotechnology
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