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Increased Expression and Prognostic Significance of BYSL in Melanoma. BYSL在黑色素瘤中的表达增加及其预后意义
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-07-09 DOI: 10.1097/CJI.0000000000000530
Zhong-Zhi Wang, Guo-Tai Yao, Liang-Zhe Wang, Yuan-Jie Zhu, Jiang-Han Chen

We evaluated the BYSL content and underlying mechanism in melanoma (SKCM) overall survival (OS). In this study, we used a comprehensive approach combining bioinformatics tools, including miRNA estimation, quantitative real-time polymerase chain reaction (qRT-PCR) of miRNAs, E3 ligase estimation, STRING analysis, TIMER analysis, examination of associated upstream modulators, protein-protein interaction (PPI) analysis, as well as retrospective and survival analyses, alongside clinical sample validation. These methods were used to investigate the content of BYSL, its methylation status, its relation to patient outcome, and its immunologic significance in tumors. Our findings revealed that BYSL expression is negatively regulated by BYSL methylation. Analysis of 468 cases of SKCM RNA sequencing samples demonstrated that enhanced BYSL expression was associated with higher tumor grade. We identified several miRNAs, namely hsa-miR-146b-3p, hsa-miR-342-3p, hsa-miR-511-5p, hsa-miR-3690, and hsa-miR-193a-5p, which showed a strong association with BYSL levels. Furthermore, we predicted the E3 ubiquitin ligase of BYSL and identified CBL, FBXW7, FZR1, KLHL3, and MARCH1 as potential modulators of BYSL. Through our investigation, we discovered that PNO1, RIOK2, TSR1, WDR3, and NOB1 proteins were strongly associated with BYSL expression. In addition, we found a close association between BYSL levels and certain immune cells, particularly dendritic cells (DCs). Notably, we observed a significant negative correlation between miR-146b-3p and BYSL mRNA expression in SKCM sera samples. Collectively, based on the previously shown evidences, BYSL can serve as a robust bioindicator of SKCM patient prognosis, and it potentially contributes to immune cell invasion in SKCM.

我们评估了黑色素瘤(SKCM)总生存率(OS)中 BYSL 的含量及其内在机制。在这项研究中,我们采用了一种结合生物信息学工具的综合方法,包括 miRNA 估算、miRNA 的定量实时聚合酶链反应(qRT-PCR)、E3 连接酶估算、STRING 分析、TIMER 分析、相关上游调节因子检查、蛋白-蛋白相互作用(PPI)分析、回顾性分析和生存分析,以及临床样本验证。这些方法用于研究 BYSL 的含量、甲基化状态、与患者预后的关系以及在肿瘤中的免疫学意义。我们的研究结果表明,BYSL的表达受BYSL甲基化的负调控。对468例SKCM RNA测序样本的分析表明,BYSL表达的增强与肿瘤分级较高有关。我们发现了几个与BYSL水平密切相关的miRNA,即hsa-miR-146b-3p、hsa-miR-342-3p、hsa-miR-511-5p、hsa-miR-3690和hsa-miR-193a-5p。此外,我们还预测了BYSL的E3泛素连接酶,并发现CBL、FBXW7、FZR1、KLHL3和MARCH1是BYSL的潜在调节因子。通过调查,我们发现 PNO1、RIOK2、TSR1、WDR3 和 NOB1 蛋白与 BYSL 的表达密切相关。此外,我们还发现 BYSL 水平与某些免疫细胞,尤其是树突状细胞(DCs)密切相关。值得注意的是,我们观察到在 SKCM 血清样本中,miR-146b-3p 与 BYSL mRNA 表达呈显著负相关。总之,根据之前显示的证据,BYSL 可作为 SKCM 患者预后的可靠生物指标,而且它有可能导致 SKCM 中免疫细胞的入侵。
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引用次数: 0
HES6 Mediates Oxidative Phosphorylation Pathway to Promote Immune Infiltration of CD8 + T Cells in Lung Adenocarcinoma. HES6介导氧化磷酸化通路,促进CD8+T细胞对肺腺癌的免疫渗透
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-07-15 DOI: 10.1097/CJI.0000000000000535
Zhoumiao Chen, Yongliang Wang, Weijian Tang, Shaohua Xu, Hao Yu, Zhao Chen

Tumor immunotherapy has recently gained popularity as a cancer treatment strategy. The molecular mechanism controlling immune infiltration in lung adenocarcinoma (LUAD) cells, however, is not well characterized. Investigating the immune infiltration modulation mechanism in LUAD is crucial. LUAD patient samples were collected, and HES6 expression and immune infiltration level of CD8 + T cells in patient tissues were analyzed. Bioinformatics was utilized to identify binding relationship between E2F1 and HES6, and enrichment pathway of HES6. The binding of E2F1 to HES6 was verified using dual-luciferase and ChIP experiments. HES6 and E2F1 expression in LUAD cells was detected. LUAD cells were co-cultured with CD8 + T cells, and the CD8 + T cell killing level, IFN-γ secretion, and CD8 + T-cell chemotaxis level were measured. Expression of key genes involved in oxidative phosphorylation was detected, and the oxygen consumption rate of LUAD cells was assessed. A mouse model was constructed to assay Ki67 expression and apoptosis in tumor tissue. High expression of HES6 promoted CD8 + T-cell infiltration and enhanced T-cell killing ability through oxidative phosphorylation. Further bioinformatics analysis, molecular experiments, and cell experiments verified that E2F1 negatively regulated HES6 by oxidative phosphorylation, which suppressed CD8 + T-cell immune infiltration. In addition, in vivo assays illustrated that silencing HES6 repressed tumor cell immune evasion. E2F1 inhibited HES6 transcription, thereby mediating oxidative phosphorylation to suppress immune infiltration of CD8 + T cells in LUAD. The biological functions and signaling pathways of these genes were analyzed, which may help to understand the possible mechanisms regulating immune infiltration in LUAD.

作为一种癌症治疗策略,肿瘤免疫疗法近来越来越受欢迎。然而,控制肺腺癌(LUAD)细胞免疫浸润的分子机制尚不十分明确。研究 LUAD 的免疫浸润调节机制至关重要。研究人员收集了 LUAD 患者样本,分析了患者组织中 HES6 的表达和 CD8+ T 细胞的免疫浸润水平。利用生物信息学方法确定了E2F1与HES6的结合关系以及HES6的富集途径。利用双荧光素酶和ChIP实验验证了E2F1与HES6的结合。检测 LUAD 细胞中 HES6 和 E2F1 的表达。将 LUAD 细胞与 CD8+ T 细胞共培养,测定 CD8+ T 细胞杀伤水平、IFN-γ 分泌和 CD8+ T 细胞趋化水平。检测了参与氧化磷酸化的关键基因的表达,并评估了LUAD细胞的耗氧率。建立了一个小鼠模型来检测肿瘤组织中 Ki67 的表达和凋亡。HES6的高表达促进了CD8+ T细胞的浸润,并通过氧化磷酸化增强了T细胞的杀伤能力。进一步的生物信息学分析、分子实验和细胞实验证实,E2F1通过氧化磷酸化负调控HES6,从而抑制了CD8+ T细胞的免疫浸润。此外,体内实验表明,沉默 HES6 可抑制肿瘤细胞的免疫逃避。E2F1抑制了HES6的转录,从而介导氧化磷酸化抑制了LUAD中CD8+ T细胞的免疫浸润。分析了这些基因的生物学功能和信号通路,有助于了解调控LUAD免疫浸润的可能机制。
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引用次数: 0
Vitexin Inhibits TNBC Progression and Metastasis by Modulating Macrophage Polarization Through EGFR Signaling. 荆芥苷通过表皮生长因子受体信号调节巨噬细胞极化,从而抑制 TNBC 的发展和转移
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-06-07 DOI: 10.1097/CJI.0000000000000519
Yufeng Lin, Lin Li, Huakang Huang, Xiaohong Wen, Yongcheng Zhang, Rongxin Zhang, Wenbin Huang

Triple-negative breast cancer (TNBC) lacks sensitivity to endocrine and targeted therapies, exhibiting high recurrence and poor prognosis postchemotherapy. Tumor-associated macrophages (TAMs) play a crucial role in cancer progression. Vitexin, a compound with diverse pharmacological effects including anti-cancer activity, remains unexplored in its impact on TAMs during TNBC development. This study aimed to investigate vitexin's effect on TNBC, its regulation of macrophage polarization (M1 vs. M2), and the underlying EGFR/PI3K/AKT/mTOR pathway. Our results demonstrated that vitexin suppressed the proliferation and invasion of TNBC cells (MDA-MB-231 and BT549) while inducing macrophage mediators that further inhibited cancer cell migration. Vitexin also promoted M1 polarization and suppressed M2 polarization, affecting EGFR phosphorylation and downstream signaling. In vivo, vitexin inhibited tumor growth, favoring M1 polarization and suppressing M2 polarization, with synergistic effects when combined with doxorubicin (Dox). These findings offer novel insights into vitexin's potential in TNBC treatment.

三阴性乳腺癌(TNBC)对内分泌和靶向治疗缺乏敏感性,化疗后复发率高、预后差。肿瘤相关巨噬细胞(TAMs)在癌症进展中起着至关重要的作用。蔓荆子苷是一种具有多种药理作用(包括抗癌活性)的化合物,但它在TNBC发展过程中对TAMs的影响仍有待探索。本研究旨在探讨荆芥苷对 TNBC 的影响、其对巨噬细胞极化(M1 与 M2)的调控以及潜在的表皮生长因子受体/PI3K/AKT/mTOR 通路。我们的研究结果表明,牡荆素抑制了 TNBC 细胞(MDA-MB-231 和 BT549)的增殖和侵袭,同时诱导巨噬细胞介质进一步抑制癌细胞迁移。牡荆素还能促进 M1 极化,抑制 M2 极化,影响表皮生长因子受体磷酸化和下游信号转导。在体内,蔓荆子苷能抑制肿瘤生长,促进 M1 极化,抑制 M2 极化,与多柔比星(Dox)联合使用能产生协同效应。这些发现为了解蔓荆子苷在 TNBC 治疗中的潜力提供了新的视角。
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引用次数: 0
Prognostic Value and Immune Signatures of Anoikis-related Genes in Breast Cancer. 乳腺癌中 Anoikis 相关基因的预后价值和免疫特征
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-10-01 Epub Date: 2024-06-12 DOI: 10.1097/CJI.0000000000000523
Qing Wu, Yang Luo, Nan Lin, Shiyao Zheng, Xianhe Xie

From databases of the Cancer Genome Atlas (TCGA) and GSE42568, transcriptome data of breast cancer patients was obtained. Then, anoikis-related genes (ANRGs) were identified and constructed a risk score system. As a threshold value, the median risk score was used to stratify patients into low-risk and high-risk groups. Kaplan-Meier analysis was then conducted to evaluate the prognostic ability of the risk score system, which was validated using GSE7390. Furthermore, we identified potential enrichment of function and tumor immune infiltration in the model. Finally, the biological functions of a risk gene (EPB41L4B) in breast cancer were investigated through in vitro experiments. We constructed a risk score system via 9 prognosis ANRGs (CXCL2, EPB41L4B, SLC7A5, SFRP1, SDC1, BHLHE41, SPINT1, KRT15, and CD24). The Kaplan-Meier analysis showed that both TCGA-BRCA (training set) and GSE7390 (testing set) patients with high-risk status had significantly worse survival outcomes. In addition, the calibration plots were in good agreement with the prognosis prediction. Breast cancer patients with immunosuppressive microenvironment could be screened using risk groups since risk scores were correlated negatively with ESTIMATE score, tumor-infiltration lymphocytes, immune checkpoints, and chemotactic factors. Furthermore, cellular viability and cell migration of cancerous breast cells were inhibited and apoptosis was promoted by down-regulation of EPB41L4B gene expression. Based on ANRGs, a 9-gene prognostic model could be developed to predict breast cancer prognosis; moreover, patients of the high-risk group were in an immunosuppressed tumor microenvironment.

从癌症基因组图谱(TCGA)和GSE42568数据库中获得了乳腺癌患者的转录组数据。然后,确定了乳腺癌相关基因(ANRGs),并构建了风险评分系统。以风险评分中位数作为阈值,将患者分为低风险组和高风险组。然后进行 Kaplan-Meier 分析,评估风险评分系统的预后能力,并使用 GSE7390 对其进行了验证。此外,我们还发现了模型中潜在的功能富集和肿瘤免疫浸润。最后,我们通过体外实验研究了风险基因(EPB41L4B)在乳腺癌中的生物学功能。我们通过9个预后ANRGs(CXCL2、EPB41L4B、SLC7A5、SFRP1、SDC1、BHLHE41、SPINT1、KRT15和CD24)构建了一个风险评分系统。Kaplan-Meier分析表明,TCGA-BRCA(训练集)和GSE7390(测试集)高危患者的生存结果都明显较差。此外,校准图与预后预测结果十分吻合。由于风险评分与ESTIMATE评分、肿瘤浸润淋巴细胞、免疫检查点和趋化因子呈负相关,因此可以利用风险组来筛选具有免疫抑制微环境的乳腺癌患者。此外,下调 EPB41L4B 基因的表达可抑制乳腺癌细胞的活力和迁移,并促进细胞凋亡。基于ANRGs,可以建立一个9基因预后模型来预测乳腺癌的预后;此外,高风险组患者处于免疫抑制的肿瘤微环境中。
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引用次数: 0
Brief Communication on MAGE-A4 and Coexpression of Cancer Testis Antigens in Metastatic Synovial Sarcomas: Considerations for Development of Immunotherapeutics. 关于转移性滑膜肉瘤中 MAGE-A4 和癌症睾丸抗原共表达的简要交流:开发免疫疗法的考虑因素。
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-09-03 DOI: 10.1097/CJI.0000000000000541
Hélène Vanacker, Robert Connacher, Alexandra Meurgey, Julien Bollard, Valéry Attignon, Franck Tirode, Myriam Jean-Denis, Mehdi Brahmi, Jean-Yves Blay, Ruoxi Wang, Dennis Williams, Armelle Dufresne

Therapeutic options for synovial sarcoma (SyS) have not evolved for several decades and the efficacy of second-line treatments is very limited. The expression of a large family of proteins known as cancer testis antigens (CTAs) in SyS has spurred the development of targeted T-cell therapies currently in clinical trials, such as those aimed at melanoma-associated antigen (MAGE)-A4 and New York esophageal squamous cell carcinoma 1 (NY-ESO-1), which have shown promising clinical efficacy. Extensive knowledge of the prevalence of expression and coexpression of CTAs is critical to design T-cell therapies with optimal coverage of the patient population. We analyzed the expression of CTAs of the MAGE-A family as well as NY-ESO-1 and preferentially expressed antigen in melanoma (PRAME) by RNA sequencing in a large cohort of 133 SyS samples from patients registered in the French sarcoma database (NETSARC+). Among MAGE-As, MAGE-A4 had the highest prevalence (65%), followed by MAGE-A10 (15%) and MAGE-A9 (13%). Almost all samples (92%) expressing any of the MAGE-As also expressed MAGE-A4. NY-ESO-1 was expressed in 65% of samples, with a large but incomplete overlap with MAGE-A4, whereas PRAME was present in 121 (91%) samples. Complementary immunohistochemical analyses were used to establish the positive correlation between RNA and protein expression for MAGE-A4 and NY-ESO-1. These data inform the strategy for optimal coverage of the SyS patient population with T-cell therapies, offering patients with SyS new options for single or combined second lines of treatment.

几十年来,滑膜肉瘤(SyS)的治疗方案一直没有发展,二线治疗的疗效也非常有限。在滑膜肉瘤中表达的一大类蛋白被称为癌睾丸抗原(CTA),这促进了目前正在进行临床试验的靶向 T 细胞疗法的发展,例如针对黑色素瘤相关抗原(MAGE)-A4 和纽约食管鳞状细胞癌 1(NY-ESO-1)的疗法,这些疗法已显示出良好的临床疗效。广泛了解CTAs的表达和共表达的普遍性,对于设计出最佳覆盖患者人群的T细胞疗法至关重要。我们通过 RNA 测序分析了法国肉瘤数据库(NETSARC+)中登记的 133 例 SyS 患者样本中 MAGE-A 家族 CTAs 以及 NY-ESO-1 和黑色素瘤优先表达抗原(PRAME)的表达情况。在MAGE-As中,MAGE-A4的流行率最高(65%),其次是MAGE-A10(15%)和MAGE-A9(13%)。几乎所有表达任何一种 MAGE-As 的样本(92%)都同时表达 MAGE-A4。65%的样本表达 NY-ESO-1,与 MAGE-A4 有大量重叠,但不完全重叠,而 121 个样本(91%)中存在 PRAME。互补免疫组化分析用于确定 MAGE-A4 和 NY-ESO-1 的 RNA 和蛋白质表达之间的正相关性。这些数据为T细胞疗法在SyS患者中的最佳覆盖策略提供了信息,为SyS患者提供了单线或联合二线治疗的新选择。
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引用次数: 0
Multiomics Analysis of Interleukin-21 as a Potential Immunologic and Biomarker in Hepatocellular Carcinoma. 白细胞介素-21作为肝细胞癌潜在免疫学和生物标记物的多组学分析
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-09-01 Epub Date: 2024-06-04 DOI: 10.1097/CJI.0000000000000526
Yonghui Ma, Guanming Shao, Yuwei Xie, Dongxia Yang, Kun Li, Bin Tan, Cong Wang, Peng Sun, Jingyu Cao

Interleukin-21 (IL-21) is an important antitumor cytokine that contributes to the proliferation and differentiation of CD8 + T cells. It has been proven to enhance the response to immune checkpoint inhibitors (ICIs) in various solid tumors. However, its role in hepatocellular carcinoma (HCC) has not yet been clarified. In this research, we aimed to investigate the antitumor effect of IL-21 in HCC and its effect on ICI treatment. Through transcriptome sequencing analysis and immunohistochemistry validation, we found that patients with high IL-21 expression had a better prognosis. HCCs with high expression of IL-21 had higher infiltration of CD8 + T cells, increased expression of immune checkpoints, and an improved response to ICI treatment. In conclusion, IL-21 can enhance the efficacy of ICI treatment and improve the prognosis of patients by promoting the infiltration of CD8 + T cells and the expression of immune checkpoint-related genes.

白细胞介素-21(IL-21)是一种重要的抗肿瘤细胞因子,有助于 CD8+ T 细胞的增殖和分化。事实证明,它能增强各种实体瘤对免疫检查点抑制剂(ICIs)的反应。然而,它在肝细胞癌(HCC)中的作用尚未明确。本研究旨在探讨IL-21在HCC中的抗肿瘤作用及其对ICI治疗的影响。通过转录组测序分析和免疫组化验证,我们发现IL-21高表达的患者预后较好。IL-21 高表达的 HCC 有更高的 CD8+ T 细胞浸润,免疫检查点表达增加,对 ICI 治疗的反应也有所改善。总之,IL-21能促进CD8+ T细胞浸润和免疫检查点相关基因的表达,从而提高ICI治疗的疗效,改善患者的预后。
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引用次数: 0
A Synthetic Circuit Empowering Reprogrammed B Cells for Therapeutic Proteins Expression Regulated by Tumor Detection. 一种通过肿瘤检测调控重编程 B 细胞表达治疗蛋白的合成电路。
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-09-01 Epub Date: 2024-05-22 DOI: 10.1097/CJI.0000000000000524
Audrey Page, Marie Delles, Didier Nègre, Caroline Costa, Floriane Fusil, François-Loïc Cosset

Cancer remains a leading cause of death worldwide, but immunotherapies hold promises to cure it by awaking the patient's immune system to provide long-term protection. Cell therapies, involving the infusion of immune cells, either directly or genetically modified, are being developed to recognize and destroy cancer cells. Here, we explored the potential of a new synthetic circuit to reprogram B cells to cure cancers. This circuit consists in a sensor (a membrane-anchored IgG1), a transducer (a fragment of the NR4A1 promoter) and an effector molecule. Upon recognition of its target, this sensor triggers signaling pathways leading to the activation of the transducer and to effector expression (here, a reporter molecule). We showed that this circuit could discriminate tumors expressing the target antigen from those that did not, in a dose dependent manner in vitro. Going further, we replaced the original membrane-anchored sensor by an immunoglobulin expression cassette that can not only be membrane-anchored but also be secreted depending on B-cell maturation status. This allowed concomitant activation of the circuit and secretion of transgenic antibodies directed against the targeted antigen. Of note, these antibodies could correctly bind their target and were recognized by FcR expressed at the surface of immune cells, which should synergically amplify the action of the effector. The potential of reprogrammed B cells remains to be assessed in vivo by implementing a therapeutic effector. In the future, B-cell reprogramming platforms should allow personalized cancer treatment by adapting both the sensor and the therapeutic effectors to patients.

癌症仍然是全球死亡的主要原因,但免疫疗法有望通过唤醒病人的免疫系统来提供长期保护,从而治愈癌症。目前正在开发的细胞疗法涉及直接或经基因修饰的免疫细胞输注,以识别和摧毁癌细胞。在这里,我们探索了一种新的合成电路的潜力,以重新编程 B 细胞来治疗癌症。该回路由传感器(膜锚定 IgG1)、转换器(NR4A1 启动子片段)和效应分子组成。一旦识别到目标,传感器就会触发信号通路,从而激活转导因子并表达效应分子(这里是一个报告分子)。我们的研究表明,在体外,这种回路能以剂量依赖的方式区分表达靶抗原的肿瘤和不表达靶抗原的肿瘤。此外,我们还用免疫球蛋白表达盒取代了原来的膜锚定传感器,该表达盒不仅可以膜锚定,还可以根据 B 细胞成熟状态分泌。这样就能同时激活电路和分泌针对目标抗原的转基因抗体。值得注意的是,这些抗体可以正确地与目标结合,并被免疫细胞表面表达的 FcR 识别,从而协同放大效应物的作用。重编程 B 细胞的潜力还有待通过治疗效应物在体内进行评估。未来,B 细胞重编程平台应能根据患者的情况调整传感器和治疗效应器,从而实现个性化癌症治疗。
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引用次数: 0
Identification of the CD8 + T-cell Related Signature for Predicting the Prognosis of Gastric Cancer Based on Integrated Analysis of Bulk and Single-cell RNA Sequencing Data. 基于批量和单细胞 RNA 测序数据的综合分析,确定预测胃癌预后的 CD8+ T 细胞相关特征。
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-09-01 Epub Date: 2024-05-29 DOI: 10.1097/CJI.0000000000000528
Zhi-Gang Zhu, Zheng Wang, Qiong Wu, Dong-Liu Miao, Yi-Qi Jin, Lei Chen

The infiltration of CD8 + T cells in the tumor microenvironment is associated with better survival and immunotherapy response. However, their roles in gastric cancer have not been explored so far. In here, the profiles of GC gene expression were collected from The Cancer Genome Atlas database. Single-cell transcriptomic data originated from GSE134520. Cell clustering, annotation, and CD8 + T-cell differential genes were from the TISCH database. We determined 896 CD8 + T-cell differential genes by scRNA-seq analysis. After integrating immune-related genes, 174 overlapping genes were obtained and a novel risk model was subsequently built. The performance of CD8 + T-cell-associated gene signature was assessed in the training and external validation sets. The gene signature showed independent risk factors of overall survival for GC. A quantitative nomogram was built to enhance the clinical efficacy of this signature. Furthermore, low-risk individuals showed higher mutation status, higher immune checkpoint expression, low Tumour Immune Dysfunction and Exclusion (TIDE) scores, and higher IPS-PD-1 combined IPS-CTLA4 scores, indicating a greater response to immunotherapy. In addition, analysis of IMvigor210 immunotherapy cohort demonstrated that low-risk individuals had a favorable response to prognosis and immunotherapy. In conclusion, we generated a CD8 + T-cell-related signature that can serve as a promising tool for personalized prognosis prediction and guiding decisions regarding immunotherapy in GC patients.

肿瘤微环境中的 CD8+ T 细胞浸润与更好的生存和免疫治疗反应有关。然而,迄今为止,它们在胃癌中的作用尚未得到探讨。本文从癌症基因组图谱数据库中收集了胃癌基因表达谱。单细胞转录组数据来自 GSE134520。细胞聚类、注释和CD8+ T细胞差异基因来自TISCH数据库。我们通过 scRNA-seq 分析确定了 896 个 CD8+ T 细胞差异基因。整合免疫相关基因后,得到了174个重叠基因,随后建立了一个新的风险模型。在训练集和外部验证集中评估了 CD8+ T 细胞相关基因特征的性能。基因特征显示了GC总生存率的独立风险因素。建立的定量提名图提高了该特征的临床疗效。此外,低风险个体表现出更高的突变状态、更高的免疫检查点表达、较低的肿瘤免疫功能障碍和排斥(TIDE)评分以及更高的IPS-PD-1联合IPS-CTLA4评分,这表明他们对免疫疗法的反应更大。此外,对IMvigor210免疫疗法队列的分析表明,低风险个体对预后和免疫疗法的反应良好。总之,我们生成的 CD8+ T 细胞相关特征可作为一种有前途的工具,用于 GC 患者的个性化预后预测和免疫治疗决策指导。
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引用次数: 0
Bronchiolitis after Combination Immunotherapy With Ipilimumab and Nivolumab in a Melanoma Patient. 一名黑色素瘤患者接受伊匹单抗和尼伐单抗联合免疫疗法后出现支气管炎。
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-09-01 Epub Date: 2024-02-27 DOI: 10.1097/CJI.0000000000000509
Shahir Basir, Jana Bosiers, Hans M Westgeest, David C Y Yick, Jochem R van Werven, Cor H van der Leest

Therapy with immune checkpoint inhibitors (ICIs) has significantly improved the prognosis of metastatic melanoma but is also associated with various immune-related adverse events (AE), including pulmonary toxicity. Herein, we describe the case of a 60-year-old female with metastasized melanoma with BRAF mutation under combination immunotherapy with ipilimumab and nivolumab, who presented with a persistent, nonproductive cough for the last two months. Her CT-scan showed de novo bronchial inflammation and wall thickening in all lung fields. Initial treatment with antimicrobial treatment and inhalation corticosteroids did not resolve her symptoms, nor the radiologic abnormalities. Additional testing with transbronchial cryobiopsy showed a histologic picture of diffuse ill-formed granulomas and the presence of moderate chronic active inflammation of the respiratory epithelium, consistent with medication-related bronchiolitis. Bronchiolitis, as present in this case, has rarely been reported as an immune-related AE. A thorough diagnostic workup is mandatory as it remains a diagnosis of exclusion. Management consists of discontinuing ICIs and administering systemic corticosteroids. The addition of immunosuppressive agents (e, infliximab, cyclophosphamide, or mycophenolate mofetil) can be considered in refractory cases. In our case, clinical and radiologic resolution was achieved after discontinuing the ICI and treatment with high-dose prednisone. This case shows that although bronchiolitis is a rare immune-related side effect of ICIs, oncologists, and pulmonologists should always be aware of this relatively easily treatable AE.

免疫检查点抑制剂(ICIs)的治疗显著改善了转移性黑色素瘤的预后,但也与各种免疫相关不良事件(AE)有关,包括肺毒性。在此,我们描述了一例60岁女性患者的病例,她患有BRAF突变的转移性黑色素瘤,正在接受伊匹单抗和尼伐单抗的联合免疫治疗。CT扫描显示她的支气管有新的炎症,所有肺野的支气管壁增厚。最初采用抗菌治疗和吸入皮质类固醇治疗并没有缓解她的症状,也没有发现放射学异常。经支气管冷冻活组织切片的进一步检查显示,组织学图像为弥漫性不规则肉芽肿,呼吸道上皮存在中度慢性活动性炎症,与药物相关性支气管炎一致。本病例中出现的支气管炎很少被报告为免疫相关的急性呼吸道感染。由于该病仍属于排除性诊断,因此必须进行彻底的诊断检查。治疗包括停用 ICIs 和使用全身性皮质类固醇。对于难治性病例,可考虑添加免疫抑制剂(如英夫利昔单抗、环磷酰胺或霉酚酸酯)。在我们的病例中,在停用 ICI 和大剂量泼尼松治疗后,临床和放射学症状均得到缓解。本病例表明,虽然支气管炎是 ICIs 罕见的免疫相关副作用,但肿瘤学家和肺科专家应始终注意这种相对容易治疗的 AE。
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引用次数: 0
Survival Impact of Inflammation-based Prognostic Scores in Metastatic or Unresectable Esophageal Cancer Treated With Pembrolizumab Plus Chemotherapy. 基于炎症的预后评分对使用 Pembrolizumab 加化疗治疗的转移性或无法切除的食管癌患者生存期的影响
IF 3.2 4区 医学 Q3 IMMUNOLOGY Pub Date : 2024-09-01 Epub Date: 2024-06-03 DOI: 10.1097/CJI.0000000000000529
Takahito Sugase, Takashi Kanemura, Tomohira Takeoka, Norihiro Matsuura, Yasunori Masuike, Naoki Shinno, Hisashi Hara, Masatoshi Kitakaze, Masahiko Kubo, Yosuke Mukai, Toshinori Sueda, Shinichiro Hasegawa, Hirofumi Akita, Junichi Nishimura, Hiroshi Wada, Masayoshi Yasui, Takeshi Omori, Hiroshi Miyata

Pembrolizumab plus chemotherapy has been indicated as the first-line treatment for metastatic or unresectable locally advanced esophageal cancer. However, pretreatment biomarkers for predicting clinical outcomes remain unclear. We investigated the predictive value of inflammation-based prognostic scores in patients treated with pembrolizumab and chemotherapy. The Prognostic Nutritional Index (PNI), C-reactive protein/albumin ratio (CAR), neutrophil-to-lymphocyte ratio (NLR), and platelet-to-lymphocyte ratio (PLR) were calculated before initial treatment in 65 eligible patients with metastatic or unresectable locally advanced esophageal cancer receiving pembrolizumab plus CF therapy, and the relationship between these biomarkers and clinical outcomes was analyzed. The objective response rate (ORR) and progression disease (PD) were observed in 51% and 21% of all patients. Patients with PNI<39 have significantly worse treatment responses than those with PNI≥39 (ORR; 28% vs. 60%, PD; 44% vs. 13%, P =0.020). Progression-free survival (PFS) is significantly associated with the PNI and CAR ( P <0.001 and P =0.004, respectively). Overall survival (OS) is associated with PNI, CAR, and PLR ( P <0.001, P =0.008, and P =0.018, respectively). The PNI cutoff value of 39 is identified as an independent factor for PFS (odds ratio=0.27, 95% CI: 0.18-0.81, P =0.012) and OS (odds ratio=0.22, 95% CI: 0.08-0.59, P =0.003). Patients with PNI<39 have significantly worse 6-month PFS and 1-year OS than those with PNI≥39 (27.8% vs. 66.7%, 27.2% vs. 81.1%, respectively). In conclusion, inflammation-based prognostic scores are associated with survival in patients treated with pembrolizumab plus CF therapy. Pretreatment PNI is a promising candidate for predicting treatment response and survival.

Pembrolizumab 联合化疗已被列为转移性或无法切除的局部晚期食管癌的一线治疗方法。然而,预测临床结果的预处理生物标志物仍不明确。我们研究了基于炎症的预后评分对接受彭博利珠单抗和化疗患者的预测价值。我们在65名接受pembrolizumab加CF治疗的符合条件的转移性或无法切除的局部晚期食管癌患者的初始治疗前计算了预后营养指数(PNI)、C反应蛋白/白蛋白比值(CAR)、中性粒细胞与淋巴细胞比值(NLR)和血小板与淋巴细胞比值(PLR),并分析了这些生物标志物与临床预后之间的关系。在所有患者中,分别有51%和21%的患者观察到了客观反应率(ORR)和疾病进展(PD)。PNI患者
{"title":"Survival Impact of Inflammation-based Prognostic Scores in Metastatic or Unresectable Esophageal Cancer Treated With Pembrolizumab Plus Chemotherapy.","authors":"Takahito Sugase, Takashi Kanemura, Tomohira Takeoka, Norihiro Matsuura, Yasunori Masuike, Naoki Shinno, Hisashi Hara, Masatoshi Kitakaze, Masahiko Kubo, Yosuke Mukai, Toshinori Sueda, Shinichiro Hasegawa, Hirofumi Akita, Junichi Nishimura, Hiroshi Wada, Masayoshi Yasui, Takeshi Omori, Hiroshi Miyata","doi":"10.1097/CJI.0000000000000529","DOIUrl":"10.1097/CJI.0000000000000529","url":null,"abstract":"<p><p>Pembrolizumab plus chemotherapy has been indicated as the first-line treatment for metastatic or unresectable locally advanced esophageal cancer. However, pretreatment biomarkers for predicting clinical outcomes remain unclear. We investigated the predictive value of inflammation-based prognostic scores in patients treated with pembrolizumab and chemotherapy. The Prognostic Nutritional Index (PNI), C-reactive protein/albumin ratio (CAR), neutrophil-to-lymphocyte ratio (NLR), and platelet-to-lymphocyte ratio (PLR) were calculated before initial treatment in 65 eligible patients with metastatic or unresectable locally advanced esophageal cancer receiving pembrolizumab plus CF therapy, and the relationship between these biomarkers and clinical outcomes was analyzed. The objective response rate (ORR) and progression disease (PD) were observed in 51% and 21% of all patients. Patients with PNI<39 have significantly worse treatment responses than those with PNI≥39 (ORR; 28% vs. 60%, PD; 44% vs. 13%, P =0.020). Progression-free survival (PFS) is significantly associated with the PNI and CAR ( P <0.001 and P =0.004, respectively). Overall survival (OS) is associated with PNI, CAR, and PLR ( P <0.001, P =0.008, and P =0.018, respectively). The PNI cutoff value of 39 is identified as an independent factor for PFS (odds ratio=0.27, 95% CI: 0.18-0.81, P =0.012) and OS (odds ratio=0.22, 95% CI: 0.08-0.59, P =0.003). Patients with PNI<39 have significantly worse 6-month PFS and 1-year OS than those with PNI≥39 (27.8% vs. 66.7%, 27.2% vs. 81.1%, respectively). In conclusion, inflammation-based prognostic scores are associated with survival in patients treated with pembrolizumab plus CF therapy. Pretreatment PNI is a promising candidate for predicting treatment response and survival.</p>","PeriodicalId":15996,"journal":{"name":"Journal of Immunotherapy","volume":null,"pages":null},"PeriodicalIF":3.2,"publicationDate":"2024-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"141200085","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Immunotherapy
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