首页 > 最新文献

Journal of Infection and Chemotherapy最新文献

英文 中文
Knowledge and awareness of human papillomavirus (HPV) influence HPV vaccination uptake among the catch-up generation in Japan. 对人类乳头瘤病毒 (HPV) 的了解和认识影响日本 "追赶一代 "对 HPV 疫苗的接种率。
IF 1.9 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-21 DOI: 10.1016/j.jiac.2024.09.016
Yuka Yamagishi, Natsuko Nakamura, Marina Minami, Kaoru Keyama, Kyoko Osaka, Nagamasa Maeda, Hiroshige Mikamo

Introduction: Despite its importance for young women, the human papillomavirus (HPV) vaccination coverage remains low in Japan. Previous studies have examined behaviors related to HPV catch-up vaccination. Uniquely, this study aimed to investigate perceptions and factors influencing vaccination coverage among female university students in the catch-up program, focusing on both medical and non-medical undergraduates.

Methods: A web-based survey was conducted at Kochi University from January 16 to February 13, 2023, targeting female students born between April 2, 1997, and April 1, 2006. The survey collected demographic data and assessed knowledge of HPV infection, cervical cancer, and preventive measures. Chi-square tests and logistic regression analyses were used to identify differences between vaccinated and unvaccinated groups as well as factors related to HPV vaccination.

Results: Of the 310 participants, 39.0 % were vaccinated against HPV, 35.2 % were freshmen, and 75.2 % were in medical science programs. HPV vaccination was significantly associated with being in upper years of university (OR = 3.78-42.83), studying medical sciences (OR = 1.93), undergoing cervical cancer screening (OR = 4.04), and receiving free vaccination vouchers (OR = 2.03).

Conclusion: Knowledge and awareness of HPV and cervical cancer significantly contribute to higher vaccination uptake in the generation receiving catch-up vaccinations. Tailoring information and distributing free vaccination vouchers could enhance HPV vaccination rates and awareness in this group.

导言:尽管人类乳头瘤病毒 (HPV) 疫苗对年轻女性很重要,但在日本,该疫苗的接种率仍然很低。以前的研究曾对与 HPV 补种疫苗相关的行为进行过调查。本研究旨在调查女大学生对补种计划中疫苗接种覆盖率的看法和影响因素,重点关注医学和非医学专业的本科生:方法:于 2023 年 1 月 16 日至 2 月 13 日在高知大学进行了一项网络调查,调查对象为 1997 年 4 月 2 日至 2006 年 4 月 1 日期间出生的女大学生。调查收集了人口统计学数据,并评估了对 HPV 感染、宫颈癌和预防措施的了解程度。采用卡方检验和逻辑回归分析来确定接种疫苗组和未接种疫苗组之间的差异以及与接种 HPV 疫苗相关的因素:在310名参与者中,39.0%接种了HPV疫苗,35.2%为大一新生,75.2%就读于医学专业。HPV疫苗接种与大学高年级(OR=3.78-42.83)、医学专业(OR=1.93)、接受宫颈癌筛查(OR=4.04)和获得免费疫苗接种券(OR=2.03)有明显相关性:结论:对人类乳头瘤病毒和宫颈癌的了解和认识大大有助于提高接受补种的一代人的疫苗接种率。有针对性地提供信息和分发免费疫苗接种券可以提高这一群体的 HPV 疫苗接种率和对疫苗的认识。
{"title":"Knowledge and awareness of human papillomavirus (HPV) influence HPV vaccination uptake among the catch-up generation in Japan.","authors":"Yuka Yamagishi, Natsuko Nakamura, Marina Minami, Kaoru Keyama, Kyoko Osaka, Nagamasa Maeda, Hiroshige Mikamo","doi":"10.1016/j.jiac.2024.09.016","DOIUrl":"10.1016/j.jiac.2024.09.016","url":null,"abstract":"<p><strong>Introduction: </strong>Despite its importance for young women, the human papillomavirus (HPV) vaccination coverage remains low in Japan. Previous studies have examined behaviors related to HPV catch-up vaccination. Uniquely, this study aimed to investigate perceptions and factors influencing vaccination coverage among female university students in the catch-up program, focusing on both medical and non-medical undergraduates.</p><p><strong>Methods: </strong>A web-based survey was conducted at Kochi University from January 16 to February 13, 2023, targeting female students born between April 2, 1997, and April 1, 2006. The survey collected demographic data and assessed knowledge of HPV infection, cervical cancer, and preventive measures. Chi-square tests and logistic regression analyses were used to identify differences between vaccinated and unvaccinated groups as well as factors related to HPV vaccination.</p><p><strong>Results: </strong>Of the 310 participants, 39.0 % were vaccinated against HPV, 35.2 % were freshmen, and 75.2 % were in medical science programs. HPV vaccination was significantly associated with being in upper years of university (OR = 3.78-42.83), studying medical sciences (OR = 1.93), undergoing cervical cancer screening (OR = 4.04), and receiving free vaccination vouchers (OR = 2.03).</p><p><strong>Conclusion: </strong>Knowledge and awareness of HPV and cervical cancer significantly contribute to higher vaccination uptake in the generation receiving catch-up vaccinations. Tailoring information and distributing free vaccination vouchers could enhance HPV vaccination rates and awareness in this group.</p>","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2024-09-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142289288","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Retrospective study on penicillin allergy delabeling and evaluation of an antibiotic allergy assessment tool. 青霉素过敏脱标和抗生素过敏评估工具的回顾性研究。
IF 1.9 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-20 DOI: 10.1016/j.jiac.2024.09.015
Ryoko Honda, Kazuhiro Ishikawa, Hiroki Ozawa, Emilie Louise Akiko Matsumoto-Takahashi, Nobuyoshi Mori

Background: It has been reported that 95 % of patients labeled as penicillin-allergic may be mislabeled. However, the process of delabeling has not advanced due to a shortage of allergy specialists capable of conducting accurate assessments. To address this issue, The Antibiotics Allergy Assessment Tool (AAAT) has been proposed as a tool to evaluate patients who can be delabeled by non-specialists.

Objective: This study aims to identify patients who can be delabeled and to evaluate patients who are likely to be delabeled using AAAT.

Methods: Patients admitted to the hospital between January 1, 2017, and December 31, 2021, with documented penicillin allergy labels were included in the study. Patients who demonstrated tolerance to labeled antibiotics or were labeled without explicit allergy declarations were defined as delabeling. Subsequently, patients who did not meet the criteria for delabeling were evaluated for their potential to be delabeled using the AAAT, retrospectively.

Results: 530 patients were selected, of which 62 (11.7 %) were delabeled. The AAAT evaluation of the remaining patients indicated that at least an additional 137 (25.8 %) patients could potentially be delabeled.

Conclusion: The use of AAAT demonstrated the potential to delabel approximately third as many patients without the need for specialist evaluation. To promote broader delabeling efforts in the future, prospective studies should investigate the safety and effectiveness of evaluation tools such as the AAAT.

背景:据报道,95% 被贴上青霉素过敏标签的患者可能是被误贴的。然而,由于缺乏能够进行准确评估的过敏专科医生,取消标签的进程并未取得进展。为了解决这一问题,有人提出了抗生素过敏评估工具(AAAT),作为评估非专科医生可以解除标签的患者的工具:本研究旨在使用 AAAT 确定可被取消标签的患者,并评估可能被取消标签的患者:研究对象包括 2017 年 1 月 1 日至 2021 年 12 月 31 日期间入院并有青霉素过敏标签记录的患者。对标签抗生素表现出耐受性或标签上没有明确过敏声明的患者被定义为脱标签患者。随后,对不符合脱标标准的患者使用 AAAT 进行回顾性评估,以确定其是否有可能脱标:结果:共选取了 530 名患者,其中 62 人(11.7%)被解除标记。对其余患者的 AAAT 评估表明,至少还有 137 名患者(25.8%)有可能被解除标记:结论:AAAT 的使用表明,无需专家评估,就有可能对大约三分之一的患者进行脱标。为促进未来更广泛的脱标工作,前瞻性研究应调查 AAAT 等评估工具的安全性和有效性。
{"title":"Retrospective study on penicillin allergy delabeling and evaluation of an antibiotic allergy assessment tool.","authors":"Ryoko Honda, Kazuhiro Ishikawa, Hiroki Ozawa, Emilie Louise Akiko Matsumoto-Takahashi, Nobuyoshi Mori","doi":"10.1016/j.jiac.2024.09.015","DOIUrl":"10.1016/j.jiac.2024.09.015","url":null,"abstract":"<p><strong>Background: </strong>It has been reported that 95 % of patients labeled as penicillin-allergic may be mislabeled. However, the process of delabeling has not advanced due to a shortage of allergy specialists capable of conducting accurate assessments. To address this issue, The Antibiotics Allergy Assessment Tool (AAAT) has been proposed as a tool to evaluate patients who can be delabeled by non-specialists.</p><p><strong>Objective: </strong>This study aims to identify patients who can be delabeled and to evaluate patients who are likely to be delabeled using AAAT.</p><p><strong>Methods: </strong>Patients admitted to the hospital between January 1, 2017, and December 31, 2021, with documented penicillin allergy labels were included in the study. Patients who demonstrated tolerance to labeled antibiotics or were labeled without explicit allergy declarations were defined as delabeling. Subsequently, patients who did not meet the criteria for delabeling were evaluated for their potential to be delabeled using the AAAT, retrospectively.</p><p><strong>Results: </strong>530 patients were selected, of which 62 (11.7 %) were delabeled. The AAAT evaluation of the remaining patients indicated that at least an additional 137 (25.8 %) patients could potentially be delabeled.</p><p><strong>Conclusion: </strong>The use of AAAT demonstrated the potential to delabel approximately third as many patients without the need for specialist evaluation. To promote broader delabeling efforts in the future, prospective studies should investigate the safety and effectiveness of evaluation tools such as the AAAT.</p>","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2024-09-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142289289","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of incidence of hyponatremia between linezolid and vancomycin in neonates and infants. 比较利奈唑胺和万古霉素在新生儿和婴儿中的低钠血症发生率。
IF 1.9 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-19 DOI: 10.1016/j.jiac.2024.09.014
Yuichi Shibata, Jun Hirai, Nobuaki Mori, Nobuhiro Asai, Mao Hagihara, Yasumasa Yamada, Hiroshige Mikamo

A previous study reported that the incidence of hyponatremia after linezolid (LZD) use was higher than that with vancomycin (VCM) use in adults. However, hyponatremia due to LZD in neonates and infants was not investigated. This study aimed to compare the incidence of hyponatremia between LZD and VCM use in neonates and infants. The retrospective study was conducted at the Aichi Medical University Hospital. All patients who were cared for in NICU or GCU and received ≥3 days of LZD or VCM were included in this study. Hyponatremia was defined as serum sodium level ≤134 mEq/L and ≥5 % decrease from baseline after administration of LZD or VCM. A total of 76 patients (LZD, N = 36; VCM, N = 37) were included. There was no significant difference in the incidence of hyponatremia between the two groups (19.4 % vs 16.2 %, p = 0.72). The proportion of patients with a minimum value of serum sodium ≤134 mEq/L during treatment was 47.3 % in the LZD group and 35.1 % in the VCM group (p = 0.29), and the decrease in serum sodium level from baseline to the minimum value was 80.5 % and 78.4 %, respectively (p = 0.85). In conclusion, there was no significant difference in the incidence of hyponatremia between the LZD and VCM groups. Therefore, it is not necessary to avoid LZD use in neonates and infants because of the risk of hyponatremia.

之前有研究报告称,成人使用利奈唑胺(LZD)后发生低钠血症的几率高于使用万古霉素(VCM)。然而,对新生儿和婴儿因使用利奈唑胺而导致的低钠血症却未进行调查。本研究旨在比较新生儿和婴儿使用 LZD 和 VCM 时的低钠血症发生率。这项回顾性研究在爱知医科大学医院进行。所有在新生儿重症监护室(NICU)或普通重症监护室(GCU)接受护理并使用 LZD 或 VCM≥ 3 天的患者均被纳入本研究。低钠血症的定义是:服用 LZD 或 VCM 后,血清钠水平≤ 134 mEq/L,且比基线下降≥ 5%。共纳入 76 例患者(LZD,36 例;VCM,37 例)。两组低钠血症发生率无明显差异(19.4% vs 16.2%,P = 0.72)。治疗期间血清钠最低值≤134 mEq/L 的患者比例,LZD 组为 47.3%,VCM 组为 35.1%(p = 0.29),血清钠水平从基线到最低值的下降率分别为 80.5%和 78.4%(p = 0.85)。总之,LZD 组和 VCM 组的低钠血症发生率没有明显差异。因此,不必因为低钠血症的风险而避免在新生儿和婴儿中使用 LZD。
{"title":"Comparison of incidence of hyponatremia between linezolid and vancomycin in neonates and infants.","authors":"Yuichi Shibata, Jun Hirai, Nobuaki Mori, Nobuhiro Asai, Mao Hagihara, Yasumasa Yamada, Hiroshige Mikamo","doi":"10.1016/j.jiac.2024.09.014","DOIUrl":"10.1016/j.jiac.2024.09.014","url":null,"abstract":"<p><p>A previous study reported that the incidence of hyponatremia after linezolid (LZD) use was higher than that with vancomycin (VCM) use in adults. However, hyponatremia due to LZD in neonates and infants was not investigated. This study aimed to compare the incidence of hyponatremia between LZD and VCM use in neonates and infants. The retrospective study was conducted at the Aichi Medical University Hospital. All patients who were cared for in NICU or GCU and received ≥3 days of LZD or VCM were included in this study. Hyponatremia was defined as serum sodium level ≤134 mEq/L and ≥5 % decrease from baseline after administration of LZD or VCM. A total of 76 patients (LZD, N = 36; VCM, N = 37) were included. There was no significant difference in the incidence of hyponatremia between the two groups (19.4 % vs 16.2 %, p = 0.72). The proportion of patients with a minimum value of serum sodium ≤134 mEq/L during treatment was 47.3 % in the LZD group and 35.1 % in the VCM group (p = 0.29), and the decrease in serum sodium level from baseline to the minimum value was 80.5 % and 78.4 %, respectively (p = 0.85). In conclusion, there was no significant difference in the incidence of hyponatremia between the LZD and VCM groups. Therefore, it is not necessary to avoid LZD use in neonates and infants because of the risk of hyponatremia.</p>","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142289286","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Global epidemiology, genotype distribution and coinfection rate of Human Aichi virus: A systematic review. 人类爱知病毒的全球流行病学、基因型分布和合并感染率:系统综述。
IF 2.2 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-16 DOI: 10.1016/j.jiac.2024.09.012
Rana Abdelqader,Hanan Hasan,Dalal A Shuqair,AbdelRahman M Zueter,Khaled A Albakri,Mohammed Ghanem
BACKGROUNDAcute gastroenteritis is a major health concern for all age groups and accounts for more than 2.5 million deaths annually in children under five years old. Human Aichi virus causes acute gastroenteritis and is associated with foodborne outbreaks. Little is known about its pathogenicity, evolution, and geographical distribution.OBJECTIVEThis study aimed to describe the global seroprevalence of AiV-1 and its genotype distribution, track outbreaks, and estimate co-infection rates with other viral gastroenteritis.METHODSA comprehensive systematic search of the epidemiological aspects of AiV-1 was conducted using peer-reviewed English original articles indexed in several scientific database libraries since its first detection in Japan until October 2022. A total of 55 published studies were included in the final analysis based on the inclusion criteria.RESULTThe global prevalence of AiV-1 was 1.45 %. To date, nine AiV-1 outbreaks were reported following the first oyster-associated outbreak in Japan between 1987 and 1991. AiV-1 genotype A has a worldwide distribution, whereas genotypes B and C have a pattern of geo-localization. The gradual and significant increase of AiV-1 seroprevalence with age was reported in all studies. The most predominant viruses causing viral coinfection among AiV-1-infected patients were Norovirus (36.55 %), Rotavirus (18.91 %), and Sapovirus (15.13 %). Coinfections with Norovirus (p-value 0.003), Rotavirus (p = 0.007), and Human Astrovirus (p = 0.032) were significantly correlated with AiV-1 coinfection.CONCLUSIONThis was the first comprehensive systematic review of AiV-1. Although AiV-1 has a low global prevalence, it can be considered a health concern due to its association with childhood gastroenteritis.
背景急性肠胃炎是各年龄段人群的主要健康问题,每年造成 250 多万五岁以下儿童死亡。人类爱知病毒会引起急性肠胃炎,并与食源性疾病暴发有关。本研究旨在描述 AiV-1 的全球血清流行率及其基因型分布,追踪疫情爆发情况,并估算与其他病毒性肠胃炎的合并感染率。方法对 AiV-1 的流行病学方面进行了全面的系统检索,检索对象为自日本首次检测到该病毒以来至 2022 年 10 月在多个科学数据库库中收录的经同行评审的英文原创文章。结果AiV-1 的全球流行率为 1.45%。自 1987 年至 1991 年日本首次爆发与牡蛎有关的疫情后,迄今为止共报告了九次 AiV-1 疫情。AiV-1 基因型 A 分布于世界各地,而基因型 B 和 C 则具有地理定位模式。所有研究都表明,随着年龄的增长,AiV-1 的血清流行率会逐渐显著上升。在 AiV-1 感染者中,导致病毒合并感染的最主要病毒是诺罗病毒(36.55%)、轮状病毒(18.91%)和沙波病毒(15.13%)。诺罗病毒(p 值为 0.003)、轮状病毒(p = 0.007)和人类天花病毒(p = 0.032)合并感染与 AiV-1 合并感染显著相关。尽管 AiV-1 在全球的流行率较低,但由于它与儿童肠胃炎有关,因此可被视为一种健康问题。
{"title":"Global epidemiology, genotype distribution and coinfection rate of Human Aichi virus: A systematic review.","authors":"Rana Abdelqader,Hanan Hasan,Dalal A Shuqair,AbdelRahman M Zueter,Khaled A Albakri,Mohammed Ghanem","doi":"10.1016/j.jiac.2024.09.012","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.012","url":null,"abstract":"BACKGROUNDAcute gastroenteritis is a major health concern for all age groups and accounts for more than 2.5 million deaths annually in children under five years old. Human Aichi virus causes acute gastroenteritis and is associated with foodborne outbreaks. Little is known about its pathogenicity, evolution, and geographical distribution.OBJECTIVEThis study aimed to describe the global seroprevalence of AiV-1 and its genotype distribution, track outbreaks, and estimate co-infection rates with other viral gastroenteritis.METHODSA comprehensive systematic search of the epidemiological aspects of AiV-1 was conducted using peer-reviewed English original articles indexed in several scientific database libraries since its first detection in Japan until October 2022. A total of 55 published studies were included in the final analysis based on the inclusion criteria.RESULTThe global prevalence of AiV-1 was 1.45 %. To date, nine AiV-1 outbreaks were reported following the first oyster-associated outbreak in Japan between 1987 and 1991. AiV-1 genotype A has a worldwide distribution, whereas genotypes B and C have a pattern of geo-localization. The gradual and significant increase of AiV-1 seroprevalence with age was reported in all studies. The most predominant viruses causing viral coinfection among AiV-1-infected patients were Norovirus (36.55 %), Rotavirus (18.91 %), and Sapovirus (15.13 %). Coinfections with Norovirus (p-value 0.003), Rotavirus (p = 0.007), and Human Astrovirus (p = 0.032) were significantly correlated with AiV-1 coinfection.CONCLUSIONThis was the first comprehensive systematic review of AiV-1. Although AiV-1 has a low global prevalence, it can be considered a health concern due to its association with childhood gastroenteritis.","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":"16 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142262361","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Validity of reducing blood culture incubation time for the BD BACTEC FX blood culture system considering microbiological and clinical aspects 从微生物学和临床角度考虑缩短 BD BACTEC FX 血液培养系统培养时间的有效性
IF 2.2 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-12 DOI: 10.1016/j.jiac.2024.09.011
Takehiro Hashimoto, Takaaki Yahiro, Sakirul Khan, Kazunori Kimitsuki, Akira Nishizono, Kazufumi Hiramatsu
A blood culture (BC) test is vital for diagnosing bacteremia in clinical practice. Although incubation time varies among automated BC systems, 4–5 days is deemed to be sufficient time for the BD BACTEC FX blood culture system. This study compared the clinical and microbiological characteristics of true-positive BC samples on day 5 with those within 4 days to reduce missed true bacteremia cases. We conducted a retrospective study of blood cultures from hospitalized patients between April 2020 and April 2023 at a tertiary care hospital in Japan. In total, 12,342 BC sets were collected from 6,567 patients. Gram-positive bacilli other than spp. and spp., non-, and yeasts other than spp. were detected more frequently in BC-positive patients on day 5 than in those within 4 days. The gastrointestinal tract was the portal of entry more frequently on day 5 than within 4 days (25 % vs. 4 %, p = 0.006). A 4-day incubation period is sufficient for the BD BACTEC FX blood culture system under routine conditions. However, a 5-day incubation period may be warranted when low pathogenicity is suspected or the gastrointestinal tract is suspected as the portal of entry.
在临床实践中,血液培养(BC)检测对诊断菌血症至关重要。尽管自动 BC 系统的培养时间各不相同,但对于 BD BACTEC FX 血培养系统来说,4-5 天被认为是足够长的时间。本研究比较了第 5 天和 4 天内真正阳性 BC 样本的临床和微生物学特征,以减少真正菌血症病例的漏诊。我们对日本一家三级医院 2020 年 4 月至 2023 年 4 月期间住院患者的血培养结果进行了回顾性研究。总共从 6567 名患者中收集了 12342 套 BC。在 BC 阳性患者中,第 5 天检测到的革兰氏阳性杆菌(非属和属)、非和酵母菌(非属和属)的频率高于 4 天内的患者。胃肠道在第 5 天比 4 天内更常成为感染入口(25% 对 4%,P = 0.006)。在常规条件下,BD BACTEC FX 血液培养系统的培养期为 4 天就足够了。但是,如果怀疑病原体的致病性较低或怀疑病原体是从胃肠道进入的,则需要 5 天的潜伏期。
{"title":"Validity of reducing blood culture incubation time for the BD BACTEC FX blood culture system considering microbiological and clinical aspects","authors":"Takehiro Hashimoto, Takaaki Yahiro, Sakirul Khan, Kazunori Kimitsuki, Akira Nishizono, Kazufumi Hiramatsu","doi":"10.1016/j.jiac.2024.09.011","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.011","url":null,"abstract":"A blood culture (BC) test is vital for diagnosing bacteremia in clinical practice. Although incubation time varies among automated BC systems, 4–5 days is deemed to be sufficient time for the BD BACTEC FX blood culture system. This study compared the clinical and microbiological characteristics of true-positive BC samples on day 5 with those within 4 days to reduce missed true bacteremia cases. We conducted a retrospective study of blood cultures from hospitalized patients between April 2020 and April 2023 at a tertiary care hospital in Japan. In total, 12,342 BC sets were collected from 6,567 patients. Gram-positive bacilli other than spp. and spp., non-, and yeasts other than spp. were detected more frequently in BC-positive patients on day 5 than in those within 4 days. The gastrointestinal tract was the portal of entry more frequently on day 5 than within 4 days (25 % vs. 4 %, p = 0.006). A 4-day incubation period is sufficient for the BD BACTEC FX blood culture system under routine conditions. However, a 5-day incubation period may be warranted when low pathogenicity is suspected or the gastrointestinal tract is suspected as the portal of entry.","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":"53 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142262363","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Disproportionality analysis of amenamevir-induced encephalopathy using the Japanese adverse drug event report database. 利用日本药物不良事件报告数据库对阿米那韦引起的脑病进行比例分析。
IF 1.9 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-12 DOI: 10.1016/j.jiac.2024.09.008
Tomoyuki Yamada, Taku Ogawa, Tomoko Tanaka, Yusuke Kusaka, Masami Nishihara, Akira Ashida

Introduction: Anti-herpesvirus drug-induced encephalopathy can complicate herpes zoster treatment; however, the association between the recently developed anti-herpesvirus drug amenamevir and encephalopathy development remains unknown. Determining the characteristics of amenamevir-induced encephalopathy is essential for potentially improving patient outcomes in the treatment of herpes zoster. The aim of this study is to identify the association between amenamevir treatment and encephalopathy and to determine the risk factors for amenamevir-induced encephalopathy via disproportionality analysis using the Japanese Adverse Drug Event Report (JADER) database.

Method: We conducted a retrospective observational study using anonymized data from the JADER database. Encephalopathy was defined according to the Standardized Medical Dictionary for Regulatory Activities Queries specific to "Noninfectious encephalopathy/delirium." Disproportionality analysis was used to calculate the reporting odds ratios (RORs) and 95 % confidence intervals (CIs) to assess associations between amenamevir and encephalopathy. Multivariable logistic regression considered age, gender, chronic kidney disease, and cytochrome P450 3A inhibitor use as potential risk factors.

Results: Out of 713,316 patients, 246 were prescribed amenamevir. The median onset of encephalopathy in these patients was 3 days. Disproportionality of encephalopathy was observed in patients treated with amenamevir (ROR, 3.44; 95 % CI, 2.48-4.78). Furthermore, multivariable logistic regression analysis suggested that an age of ≥70 years was associated with amenamevir-induced encephalopathy (ROR, 7.63; 95 % CI, 2.25-25.9).

Conclusion: These results suggest that amenamevir treatment may be associated with encephalopathy, particularly in patients aged ≥70 years. Healthcare providers should be aware of this potential risk, especially in elderly patients, to prevent severe central nervous system complications.

简介:抗疱疹病毒药物诱发的脑病可能会使带状疱疹的治疗复杂化;然而,最近开发的抗疱疹病毒药物阿美那韦与脑病发生之间的关系仍然未知。确定阿美那韦诱发脑病的特征对于改善带状疱疹患者的治疗效果至关重要。本研究旨在利用日本药物不良事件报告(JADER)数据库,通过比例失调分析确定阿美那韦治疗与脑病之间的关联,并确定阿美那韦诱发脑病的风险因素:我们利用 JADER 数据库中的匿名数据开展了一项回顾性观察研究。脑病是根据《监管活动查询标准化医学字典》中专门针对 "非感染性脑病/谵妄 "的定义。采用比例失调分析法计算报告几率比(ROR)和95%置信区间(CI),以评估阿米那韦与脑病之间的关系。多变量逻辑回归考虑了年龄、性别、慢性肾病和细胞色素P450 3A抑制剂的使用等潜在风险因素:在713,316名患者中,有246人被处方阿米那韦。这些患者出现脑病的中位时间为 3 天。在接受阿美那韦治疗的患者中观察到脑病的比例失调(ROR,3.44;95 % CI,2.48-4.78)。此外,多变量逻辑回归分析表明,年龄≥70岁与阿美那韦引起的脑病有关(ROR,7.63;95 % CI,2.25-25.9):这些结果表明,阿美那韦治疗可能与脑病有关,尤其是年龄≥70岁的患者。医疗服务提供者应意识到这一潜在风险,尤其是老年患者,以防止出现严重的中枢神经系统并发症。
{"title":"Disproportionality analysis of amenamevir-induced encephalopathy using the Japanese adverse drug event report database.","authors":"Tomoyuki Yamada, Taku Ogawa, Tomoko Tanaka, Yusuke Kusaka, Masami Nishihara, Akira Ashida","doi":"10.1016/j.jiac.2024.09.008","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.008","url":null,"abstract":"<p><strong>Introduction: </strong>Anti-herpesvirus drug-induced encephalopathy can complicate herpes zoster treatment; however, the association between the recently developed anti-herpesvirus drug amenamevir and encephalopathy development remains unknown. Determining the characteristics of amenamevir-induced encephalopathy is essential for potentially improving patient outcomes in the treatment of herpes zoster. The aim of this study is to identify the association between amenamevir treatment and encephalopathy and to determine the risk factors for amenamevir-induced encephalopathy via disproportionality analysis using the Japanese Adverse Drug Event Report (JADER) database.</p><p><strong>Method: </strong>We conducted a retrospective observational study using anonymized data from the JADER database. Encephalopathy was defined according to the Standardized Medical Dictionary for Regulatory Activities Queries specific to \"Noninfectious encephalopathy/delirium.\" Disproportionality analysis was used to calculate the reporting odds ratios (RORs) and 95 % confidence intervals (CIs) to assess associations between amenamevir and encephalopathy. Multivariable logistic regression considered age, gender, chronic kidney disease, and cytochrome P450 3A inhibitor use as potential risk factors.</p><p><strong>Results: </strong>Out of 713,316 patients, 246 were prescribed amenamevir. The median onset of encephalopathy in these patients was 3 days. Disproportionality of encephalopathy was observed in patients treated with amenamevir (ROR, 3.44; 95 % CI, 2.48-4.78). Furthermore, multivariable logistic regression analysis suggested that an age of ≥70 years was associated with amenamevir-induced encephalopathy (ROR, 7.63; 95 % CI, 2.25-25.9).</p><p><strong>Conclusion: </strong>These results suggest that amenamevir treatment may be associated with encephalopathy, particularly in patients aged ≥70 years. Healthcare providers should be aware of this potential risk, especially in elderly patients, to prevent severe central nervous system complications.</p>","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":" ","pages":""},"PeriodicalIF":1.9,"publicationDate":"2024-09-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142289287","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Evaluation of an automated rapid plasma reagin test of serum and cerebrospinal fluid for monitoring neurosyphilis treatment: A case report 评估用于监测神经梅毒治疗的血清和脑脊液自动快速血浆试剂盒:病例报告
IF 2.2 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-11 DOI: 10.1016/j.jiac.2024.09.007
Yudai Tanaka, Miho Mitsui, Nanae Asahi, Hiromichi Iwasaki, Ippei Sakamaki
This case report explores the utility of monitoring automated rapid plasma reagin (RPR) test results in both serum and cerebrospinal fluid (CSF) samples from a patient undergoing treatment for neurosyphilis. Syphilis treatment is based on the rapid plasma reagin (RPR) and syphilis treponema antibody levels, and in the case of RPR-positive syphilis, a 1/4 reduction in the RPR value by the manual card test is considered curative. However, it should be noted that when RPR is followed by the manual card test, there may seem to be no reduction when the automated method shows a steady reduction. In the present case, initially under surveillance for an unrelated condition, was found to have symptoms; imaging and serological findings suggestive of syphilis infection including syphilitic aortitis and neurosyphilis. After two weeks of high-dose intravenous Penicillin G, the patient was treated with oral amoxicillin as an indicator of RPR titers in both the serum and cerebrospinal fluid (CSF) by automated latex agglutination. RPR in serum automated latex agglutination decreased to 1/4 at 14 weeks and treatment was terminated, with a subsequent downward trend. The RPR using the manual card test was 1/2 at 14 weeks. If only the manual card method was used, the patient might require a longer treatment. In conclusion, the automated latex agglutination method for monitoring the treatment response may be useful, especially in patients with high RPR titers.
本病例报告探讨了对一名正在接受治疗的神经梅毒患者的血清和脑脊液(CSF)样本中的自动快速血浆试剂(RPR)检测结果进行监测的实用性。梅毒的治疗以快速血浆试剂(RPR)和梅毒螺旋体抗体水平为基础,对于 RPR 阳性的梅毒患者,通过手工卡片检测将 RPR 值降低 1/4,即可认为治愈。不过,需要注意的是,在用手工卡片检测 RPR 后,当自动方法显示稳定下降时,RPR 值似乎并没有下降。在本病例中,患者最初是因一种无关的疾病而接受监测,但后来发现其症状、影像学和血清学结果均提示梅毒感染,包括梅毒性主动脉炎和神经梅毒。在静脉注射大剂量青霉素 G 两周后,患者接受了口服阿莫西林治疗,通过自动乳胶凝集法检测血清和脑脊液(CSF)中的 RPR 滴度指标。14 周时,血清自动乳胶凝集法检测的 RPR 下降到 1/4,治疗终止,随后呈下降趋势。使用手工卡片检测法检测的 RPR 在 14 周时为 1/2。如果只使用手工卡片法,患者可能需要更长的治疗时间。总之,监测治疗反应的自动乳胶凝集法可能是有用的,尤其是对于 RPR 滴度较高的患者。
{"title":"Evaluation of an automated rapid plasma reagin test of serum and cerebrospinal fluid for monitoring neurosyphilis treatment: A case report","authors":"Yudai Tanaka, Miho Mitsui, Nanae Asahi, Hiromichi Iwasaki, Ippei Sakamaki","doi":"10.1016/j.jiac.2024.09.007","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.007","url":null,"abstract":"This case report explores the utility of monitoring automated rapid plasma reagin (RPR) test results in both serum and cerebrospinal fluid (CSF) samples from a patient undergoing treatment for neurosyphilis. Syphilis treatment is based on the rapid plasma reagin (RPR) and syphilis treponema antibody levels, and in the case of RPR-positive syphilis, a 1/4 reduction in the RPR value by the manual card test is considered curative. However, it should be noted that when RPR is followed by the manual card test, there may seem to be no reduction when the automated method shows a steady reduction. In the present case, initially under surveillance for an unrelated condition, was found to have symptoms; imaging and serological findings suggestive of syphilis infection including syphilitic aortitis and neurosyphilis. After two weeks of high-dose intravenous Penicillin G, the patient was treated with oral amoxicillin as an indicator of RPR titers in both the serum and cerebrospinal fluid (CSF) by automated latex agglutination. RPR in serum automated latex agglutination decreased to 1/4 at 14 weeks and treatment was terminated, with a subsequent downward trend. The RPR using the manual card test was 1/2 at 14 weeks. If only the manual card method was used, the patient might require a longer treatment. In conclusion, the automated latex agglutination method for monitoring the treatment response may be useful, especially in patients with high RPR titers.","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":"76 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142262405","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Comparison of clinical characteristics and severity of COVID-19 with or without viral co-infection in hospitalized children. 比较住院儿童合并或不合并病毒感染 COVID-19 的临床特征和严重程度。
IF 2.2 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-11 DOI: 10.1016/j.jiac.2024.09.009
Kensuke Shoji,Yusuke Asai,Shinya Tsuzuki,Nobuaki Matsunaga,Setsuko Suzuki,Noriko Iwamoto,Takanori Funaki,Isao Miyairi,Norio Ohmagari
BACKGROUNDCo-infection with other pathogens can alter the severity and clinical outcomes of viral infections. However, the information regarding viral co-infections in pediatric coronavirus disease 2019 (COVID-19) cases is still limited.METHODSThis is a nationwide, retrospective cohort study using the data from the COVID-19 Registry Japan. The pediatric (<18 years), laboratory confirmed, hospitalized COVID-19 patients in the Omicron variant of concern predominant period (January 2022 to January 2024) were included. Co-infection was investigated by multiplex PCR. We compared clinical characteristics, symptoms, severity, and outcomes between children with and without co-infection.RESULTSAmong 245 hospitalized pediatric COVID-19 patients, 78 (31.8 %) had co-infections. The patient backgrounds of the "co-infection" and "SARS-CoV-2 alone" groups were similar, although age distribution was different, with a lower number of patients over 12 years in the co-infection group (n = 2, 2.6 % vs. n = 29, 17.4 %; P < 0.001). Among the patients with co-infection, the most common pathogen was enterovirus/rhinovirus (51.3 %), followed by parainfluenza virus (23.1 %) and adenovirus (12.8 %). Patients with co-infection more commonly had respiratory symptoms, including SpO2 < 96 %, shortness of breath, runny nose, and wheezing. Requirement of non-invasive oxygen support was higher in the co-infection group (n = 27, 34.6 % vs. n = 28, 16.8 %, P = 0.006). By multivariable logistic regression analysis, co-infection and presence of any comorbidity were identified as significant risk factors for necessity of oxygen therapy (odds ratio [95 % confidence interval] 2.44 [1.29-4.63] and 3.99 [2.07-7.82], respectively).CONCLUSIONSViral co-infection may increase the risk of respiratory distress in pediatric COVID-19 patients.
背景与其他病原体合并感染可改变病毒感染的严重程度和临床结果。方法这是一项全国性的回顾性队列研究,使用了日本 COVID-19 登记处的数据。研究纳入了实验室确诊的小儿(小于 18 岁)COVID-19 住院患者,这些患者处于 Omicron 变异关注的主要时期(2022 年 1 月至 2024 年 1 月)。通过多重 PCR 对合并感染进行了调查。结果在 245 名住院的小儿 COVID-19 患者中,78 人(31.8%)合并感染。合并感染 "组和 "单纯 SARS-CoV-2 感染 "组的患者背景相似,但年龄分布不同,合并感染组中 12 岁以上的患者人数较少(2 人,占 2.6%;29 人,占 17.4%;P < 0.001)。在合并感染的患者中,最常见的病原体是肠道病毒/鼻病毒(51.3%),其次是副流感病毒(23.1%)和腺病毒(12.8%)。合并感染的患者通常会出现呼吸道症状,包括 SpO2 < 96 %、气短、流鼻涕和喘息。合并感染组患者需要无创氧气支持的比例更高(n = 27,34.6 % vs. n = 28,16.8 %,P = 0.006)。通过多变量逻辑回归分析,共同感染和任何合并症的存在被确定为需要氧疗的重要风险因素(几率比[95% 置信区间]分别为 2.44 [1.29-4.63] 和 3.99 [2.07-7.82])。
{"title":"Comparison of clinical characteristics and severity of COVID-19 with or without viral co-infection in hospitalized children.","authors":"Kensuke Shoji,Yusuke Asai,Shinya Tsuzuki,Nobuaki Matsunaga,Setsuko Suzuki,Noriko Iwamoto,Takanori Funaki,Isao Miyairi,Norio Ohmagari","doi":"10.1016/j.jiac.2024.09.009","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.009","url":null,"abstract":"BACKGROUNDCo-infection with other pathogens can alter the severity and clinical outcomes of viral infections. However, the information regarding viral co-infections in pediatric coronavirus disease 2019 (COVID-19) cases is still limited.METHODSThis is a nationwide, retrospective cohort study using the data from the COVID-19 Registry Japan. The pediatric (<18 years), laboratory confirmed, hospitalized COVID-19 patients in the Omicron variant of concern predominant period (January 2022 to January 2024) were included. Co-infection was investigated by multiplex PCR. We compared clinical characteristics, symptoms, severity, and outcomes between children with and without co-infection.RESULTSAmong 245 hospitalized pediatric COVID-19 patients, 78 (31.8 %) had co-infections. The patient backgrounds of the \"co-infection\" and \"SARS-CoV-2 alone\" groups were similar, although age distribution was different, with a lower number of patients over 12 years in the co-infection group (n = 2, 2.6 % vs. n = 29, 17.4 %; P < 0.001). Among the patients with co-infection, the most common pathogen was enterovirus/rhinovirus (51.3 %), followed by parainfluenza virus (23.1 %) and adenovirus (12.8 %). Patients with co-infection more commonly had respiratory symptoms, including SpO2 < 96 %, shortness of breath, runny nose, and wheezing. Requirement of non-invasive oxygen support was higher in the co-infection group (n = 27, 34.6 % vs. n = 28, 16.8 %, P = 0.006). By multivariable logistic regression analysis, co-infection and presence of any comorbidity were identified as significant risk factors for necessity of oxygen therapy (odds ratio [95 % confidence interval] 2.44 [1.29-4.63] and 3.99 [2.07-7.82], respectively).CONCLUSIONSViral co-infection may increase the risk of respiratory distress in pediatric COVID-19 patients.","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":"91 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142262406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Long-read deep sequencing analysis of hepatitis B virus quasispecies in two elderly cases of interspousal transmission 两个老年配偶间传播病例中乙型肝炎病毒准种的长读深度测序分析
IF 2.2 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-11 DOI: 10.1016/j.jiac.2024.09.010
Jun Inoue, Takehiro Akahane, Yutaka Miyazaki, Masashi Ninomiya, Akitoshi Sano, Mio Tsuruoka, Kosuke Sato, Masazumi Onuki, Satoko Sawahashi, Keishi Ouchi, Atsushi Masamune
Hepatitis B virus (HBV) can be transmitted within a family, but an interspousal transmission in elderly cases is rare and the change of viral quasispecies during the event is unclear. We experienced two acute hepatitis B males (AH1 and AH2, 67 and 71 years old, respectively) whose HBV was transmitted from their wives with chronic HBV infection (CH1 and CH2, 67 and 66 years old, respectively). To clarify the characteristics of HBV quasispecies in such cases, we performed long-read deep sequencing of HBV preS1/preS2/S domain using samples from the 2 couples. HBV full-genome sequences determined with direct sequencing showed that the HBV sequences belonged to subgenotype B1. AH1 was 98.0–99.2 % identical to CH1, and AH2 was 98.5–99.5 % identical to CH2, whereas the identity between AH1 and AH2 was 96.9 %. The long-read deep sequencing of amplicons including preS1/preS2/S domains with PacBio Sequel IIe showed the numbers of nucleotides with >5 % substitution frequencies in AH1, AH2, CH1 and CH2 were 0 (0 %), 4 (0.31 %), 39 (3.06 %) and 28 (2.20 %), respectively, indicating that CH1 and CH2 were more heterogeneous than AH1 and AH2. From a phylogenetic analysis based on the deep sequencing, minor CH1/CH2 clones that were close to AH1/AH2 clones were considered to be substantially distinct from the major populations in CH1/CH2. The major population formed during chronic infection under the immune pressure might not be suitable to establish new infection and this might be one of the reasons why the transmission had not occurred for a long time after marriage.
乙型肝炎病毒(HBV)可在家庭内传播,但在老年病例中配偶间的传播非常罕见,而且在传播过程中病毒类群的变化尚不清楚。我们经历了两名急性乙型肝炎男性患者(AH1 和 AH2,分别为 67 岁和 71 岁),他们的 HBV 均由患有慢性 HBV 感染的妻子(CH1 和 CH2,分别为 67 岁和 66 岁)传染而来。为了明确此类病例中 HBV 类群的特征,我们利用这两对夫妇的样本对 HBV preS1/preS2/S 结构域进行了长线程深度测序。通过直接测序确定的 HBV 全基因组序列显示,HBV 序列属于 B1 亚基因型。AH1与CH1的相同度为98.0-99.2%,AH2与CH2的相同度为98.5-99.5%,而AH1与AH2的相同度为96.9%。用PacBio Sequel IIe对包括preS1/preS2/S结构域的扩增子进行长读深测序,结果显示AH1、AH2、CH1和CH2中取代频率大于5%的核苷酸数量分别为0(0 %)、4(0.31 %)、39(3.06 %)和28(2.20 %),表明CH1和CH2的异质性高于AH1和AH2。根据深度测序的系统发育分析,与 AH1/AH2 克隆接近的 CH1/CH2 小克隆被认为与 CH1/CH2 中的主要种群有本质区别。在免疫压力下慢性感染时形成的主要种群可能不适合建立新的感染,这可能是婚后长期未发生传播的原因之一。
{"title":"Long-read deep sequencing analysis of hepatitis B virus quasispecies in two elderly cases of interspousal transmission","authors":"Jun Inoue, Takehiro Akahane, Yutaka Miyazaki, Masashi Ninomiya, Akitoshi Sano, Mio Tsuruoka, Kosuke Sato, Masazumi Onuki, Satoko Sawahashi, Keishi Ouchi, Atsushi Masamune","doi":"10.1016/j.jiac.2024.09.010","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.010","url":null,"abstract":"Hepatitis B virus (HBV) can be transmitted within a family, but an interspousal transmission in elderly cases is rare and the change of viral quasispecies during the event is unclear. We experienced two acute hepatitis B males (AH1 and AH2, 67 and 71 years old, respectively) whose HBV was transmitted from their wives with chronic HBV infection (CH1 and CH2, 67 and 66 years old, respectively). To clarify the characteristics of HBV quasispecies in such cases, we performed long-read deep sequencing of HBV preS1/preS2/S domain using samples from the 2 couples. HBV full-genome sequences determined with direct sequencing showed that the HBV sequences belonged to subgenotype B1. AH1 was 98.0–99.2 % identical to CH1, and AH2 was 98.5–99.5 % identical to CH2, whereas the identity between AH1 and AH2 was 96.9 %. The long-read deep sequencing of amplicons including preS1/preS2/S domains with PacBio Sequel IIe showed the numbers of nucleotides with >5 % substitution frequencies in AH1, AH2, CH1 and CH2 were 0 (0 %), 4 (0.31 %), 39 (3.06 %) and 28 (2.20 %), respectively, indicating that CH1 and CH2 were more heterogeneous than AH1 and AH2. From a phylogenetic analysis based on the deep sequencing, minor CH1/CH2 clones that were close to AH1/AH2 clones were considered to be substantially distinct from the major populations in CH1/CH2. The major population formed during chronic infection under the immune pressure might not be suitable to establish new infection and this might be one of the reasons why the transmission had not occurred for a long time after marriage.","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":"20 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-09-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142262364","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Helicobacter pylori infection and associated risk factors among HIV-positive and HIV-negative individuals in Northern Ethiopia. 埃塞俄比亚北部 HIV 阳性和 HIV 阴性人群中的幽门螺杆菌感染及相关风险因素。
IF 2.2 4区 医学 Q3 INFECTIOUS DISEASES Pub Date : 2024-09-09 DOI: 10.1016/j.jiac.2024.09.006
Tesfay Abadi,Takele Teklu,Tadelo Wondmagegn,Meseret Alem,Girmay Desalegn
BACKGROUNDH. pylori infection is a common bacterial infection worldwide, but its prevalence varies widely between different regions and populations. The objective of this study was to determine the prevalence of H. pylori infection and associated risk factors among HIV-positive and HIV-negative individuals in northern Ethiopia.METHODSA cross-sectional study was conducted from June to September 2020 in four randomly selected health facilities located in the Tigray region of Ethiopia. A total of 463 study participants were enrolled, of whom 288 were HIV-positive and 175 were HIV-negative individuals. H. pylori stool antigen tests were performed to detect H. pylori infection. Additionally, CD4+ T cell counts were measured from only a certain number of participants.RESULTSThe overall prevalence of H. pylori infection among enrolled study participants was 39.7%. Notably, the H. pylori infection rate was significantly higher in HIV-positive patients (43.4%) compared to HIV-negative individuals (33.7%); χ2 = 4.27, p = 0.039. Higher H. pylori prevalence was observed in participants with higher CD4+ T cell counts in both HIV-positive and HIV-negative individuals. Khat chewing habit, education, and monthly income levels were significantly associated with H. pylori infection in HIV-negative individuals, while the association between Body mass index (BMI) and H. pylori infection was observed in HIV-positive patients, but not HIV-negative individuals.CONCLUSIONThis study demonstrates a higher prevalence of H. pylori infection in HIV-positive patients compared to HIV-negative individuals, emphasizing the importance of comprehensive diagnostics, patient care, and management of H. pylori infection in HIV-positive individuals.
背景幽门螺杆菌感染是全球常见的细菌感染,但不同地区和人群的感染率差异很大。本研究旨在确定埃塞俄比亚北部 HIV 阳性和 HIV 阴性人群中幽门螺杆菌感染率及相关风险因素。共招募了 463 名研究参与者,其中 288 人为 HIV 阳性者,175 人为 HIV 阴性者。幽门螺杆菌粪便抗原检测用于检测幽门螺杆菌感染。此外,仅对部分参与者的 CD4+ T 细胞计数进行了测量。结果参加研究的参与者中幽门螺杆菌感染的总流行率为 39.7%。值得注意的是,HIV 阳性患者的幽门螺杆菌感染率(43.4%)明显高于 HIV 阴性患者(33.7%);χ2 = 4.27,P = 0.039。在 HIV 阳性和 HIV 阴性患者中,CD4+ T 细胞计数较高的参与者幽门螺杆菌感染率较高。咀嚼卡塔叶的习惯、教育程度和月收入水平与 HIV 阴性个体的幽门螺杆菌感染显著相关,而在 HIV 阳性患者中观察到身体质量指数(BMI)与幽门螺杆菌感染的相关性,但在 HIV 阴性个体中未观察到。
{"title":"Helicobacter pylori infection and associated risk factors among HIV-positive and HIV-negative individuals in Northern Ethiopia.","authors":"Tesfay Abadi,Takele Teklu,Tadelo Wondmagegn,Meseret Alem,Girmay Desalegn","doi":"10.1016/j.jiac.2024.09.006","DOIUrl":"https://doi.org/10.1016/j.jiac.2024.09.006","url":null,"abstract":"BACKGROUNDH. pylori infection is a common bacterial infection worldwide, but its prevalence varies widely between different regions and populations. The objective of this study was to determine the prevalence of H. pylori infection and associated risk factors among HIV-positive and HIV-negative individuals in northern Ethiopia.METHODSA cross-sectional study was conducted from June to September 2020 in four randomly selected health facilities located in the Tigray region of Ethiopia. A total of 463 study participants were enrolled, of whom 288 were HIV-positive and 175 were HIV-negative individuals. H. pylori stool antigen tests were performed to detect H. pylori infection. Additionally, CD4+ T cell counts were measured from only a certain number of participants.RESULTSThe overall prevalence of H. pylori infection among enrolled study participants was 39.7%. Notably, the H. pylori infection rate was significantly higher in HIV-positive patients (43.4%) compared to HIV-negative individuals (33.7%); χ2 = 4.27, p = 0.039. Higher H. pylori prevalence was observed in participants with higher CD4+ T cell counts in both HIV-positive and HIV-negative individuals. Khat chewing habit, education, and monthly income levels were significantly associated with H. pylori infection in HIV-negative individuals, while the association between Body mass index (BMI) and H. pylori infection was observed in HIV-positive patients, but not HIV-negative individuals.CONCLUSIONThis study demonstrates a higher prevalence of H. pylori infection in HIV-positive patients compared to HIV-negative individuals, emphasizing the importance of comprehensive diagnostics, patient care, and management of H. pylori infection in HIV-positive individuals.","PeriodicalId":16103,"journal":{"name":"Journal of Infection and Chemotherapy","volume":"2013 1","pages":""},"PeriodicalIF":2.2,"publicationDate":"2024-09-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142198223","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of Infection and Chemotherapy
全部 Acc. Chem. Res. ACS Applied Bio Materials ACS Appl. Electron. Mater. ACS Appl. Energy Mater. ACS Appl. Mater. Interfaces ACS Appl. Nano Mater. ACS Appl. Polym. Mater. ACS BIOMATER-SCI ENG ACS Catal. ACS Cent. Sci. ACS Chem. Biol. ACS Chemical Health & Safety ACS Chem. Neurosci. ACS Comb. Sci. ACS Earth Space Chem. ACS Energy Lett. ACS Infect. Dis. ACS Macro Lett. ACS Mater. Lett. ACS Med. Chem. Lett. ACS Nano ACS Omega ACS Photonics ACS Sens. ACS Sustainable Chem. Eng. ACS Synth. Biol. Anal. Chem. BIOCHEMISTRY-US Bioconjugate Chem. BIOMACROMOLECULES Chem. Res. Toxicol. Chem. Rev. Chem. Mater. CRYST GROWTH DES ENERG FUEL Environ. Sci. Technol. Environ. Sci. Technol. Lett. Eur. J. Inorg. Chem. IND ENG CHEM RES Inorg. Chem. J. Agric. Food. Chem. J. Chem. Eng. Data J. Chem. Educ. J. Chem. Inf. Model. J. Chem. Theory Comput. J. Med. Chem. J. Nat. Prod. J PROTEOME RES J. Am. Chem. Soc. LANGMUIR MACROMOLECULES Mol. Pharmaceutics Nano Lett. Org. Lett. ORG PROCESS RES DEV ORGANOMETALLICS J. Org. Chem. J. Phys. Chem. J. Phys. Chem. A J. Phys. Chem. B J. Phys. Chem. C J. Phys. Chem. Lett. Analyst Anal. Methods Biomater. Sci. Catal. Sci. Technol. Chem. Commun. Chem. Soc. Rev. CHEM EDUC RES PRACT CRYSTENGCOMM Dalton Trans. Energy Environ. Sci. ENVIRON SCI-NANO ENVIRON SCI-PROC IMP ENVIRON SCI-WAT RES Faraday Discuss. Food Funct. Green Chem. Inorg. Chem. Front. Integr. Biol. J. Anal. At. Spectrom. J. Mater. Chem. A J. Mater. Chem. B J. Mater. Chem. C Lab Chip Mater. Chem. Front. Mater. Horiz. MEDCHEMCOMM Metallomics Mol. Biosyst. Mol. Syst. Des. Eng. Nanoscale Nanoscale Horiz. Nat. Prod. Rep. New J. Chem. Org. Biomol. Chem. Org. Chem. Front. PHOTOCH PHOTOBIO SCI PCCP Polym. Chem.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1