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The Mechanism by Which Cyperus rotundus Ameliorates Osteoarthritis: A Work Based on Network Pharmacology. 香附改善骨关节炎的机制:基于网络药理学的研究。
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-29 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S483652
Min-Dong Du, Kai-Yi He, Si-Qi Fan, Jin-Yi Li, Jin-Fu Liu, Zi-Qiang Lei, Gang Qin

Background: Cyperus rotundus (CR) is widely used in traditional Chinese medicine to prevent and treat a variety of diseases. However, its functions and mechanism of action in osteoarthritis (OA) has not been elucidated. Here, a comprehensive strategy combining network pharmacology, molecular docking, molecular dynamics simulation and in vitro experiments was used to address this issue.

Methods: The bioactive ingredients of CR were screened in TCMSP database, and the potential targets of these ingredients were obtained through Swiss Target Prediction database. Genes in OA pathogenesis were collected through GeneCards, OMIM and DisGeNET databases. Gene Ontology (GO) analysis and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis were performed using DAVID database. STRING database and Cytoscape 3.10 software were used to construct "component-target-pathway" network, and predict the core targets affected by CR. The binding affinity between bioactive components and the core targets was evaluated by molecular docking and molecular dynamics simulation. The therapeutic activity of kaempferol on chondrocytes in inflammatory conditions was verified by in vitro experiments.

Results: Fifteen CR bioactive ingredients were obtained, targeting 192 OA-related genes. A series of biological processes, cell components, molecular functions and pathways were predicted to be modulated by CR components. The core targets of CR in OA treatment were AKT serine/threonine kinase 1 (AKT1), interleukin 1 beta (IL1B), SRC proto-oncogene, non-receptor tyrosine kinase (SRC), BCL2 apoptosis regulator (BCL2), signal transducer and activator of transcription 3 (STAT3), epidermal growth factor receptor (EGFR), hypoxia-inducible factor 1 subunit alpha (HIF1A), matrix metallopeptidase 9 (MMP9), estrogen receptor 1 (ESR1) and PPARG orthologs from vertebrates (PPARG), and the main bioactive ingredients of CR showed good binding affinity with these targets. In addition, kaempferol, one of the CR bioactive components, weakens the effects of IL-1β on the viability, apoptosis and inflammation of chondrocytes.

Conclusion: Theoretically, CR has great potential to ameliorate the symptoms and progression of OA, via multiple components, multiple targets, and multiple downstream pathways.

背景:香附(Cyperus rotundus,CR)在传统中药中被广泛用于预防和治疗多种疾病。然而,它在骨关节炎(OA)中的功能和作用机制尚未阐明。在此,我们采用了一种结合网络药理学、分子对接、分子动力学模拟和体外实验的综合策略来解决这一问题:方法:从 TCMSP 数据库中筛选出 CR 的生物活性成分,并通过 Swiss Target Prediction 数据库获得这些成分的潜在靶点。通过 GeneCards、OMIM 和 DisGeNET 数据库收集 OA 发病基因。利用 DAVID 数据库进行了基因本体(GO)分析和京都基因和基因组百科全书(KEGG)富集分析。利用 STRING 数据库和 Cytoscape 3.10 软件构建了 "成分-靶点-通路 "网络,并预测了受 CR 影响的核心靶点。通过分子对接和分子动力学模拟评估了生物活性成分与核心靶点的结合亲和力。通过体外实验验证了山奈酚对炎症条件下软骨细胞的治疗活性:结果:获得了 15 种 CR 生物活性成分,靶向 192 个 OA 相关基因。预测了 CR 成分可调节的一系列生物过程、细胞成分、分子功能和通路。CR治疗OA的核心靶点是AKT丝氨酸/苏氨酸激酶1(AKT1)、白细胞介素1β(IL1B)、SRC原癌基因、非受体酪氨酸激酶(SRC)、BCL2凋亡调节因子(BCL2)、信号转导和激活转录3(STAT3)、表皮生长因子受体(EGFR)、缺氧诱导因子 1 亚基α(HIF1A)、基质金属肽酶 9(MMP9)、雌激素受体 1(ESR1)和脊椎动物的 PPARG 同源物(PPARG)。此外,CR 的生物活性成分之一山奈酚还能削弱 IL-1β 对软骨细胞活力、凋亡和炎症的影响:从理论上讲,CR 具有通过多种成分、多种靶点和多种下游途径改善 OA 症状和病情发展的巨大潜力。
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引用次数: 0
Alterations of Hepatic Lipidome Occur in a Gouty Model: A Shotgun Lipidomics Study. 痛风模型中肝脏脂质体的变化:射枪脂质组学研究
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-29 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S485979
Xiaofen Xu, Wumeng Jin, Jingyi Song, Xuanming Hu, Lu Lu, Jida Zhang, Changfeng Hu

Background: Liver injury, such as nonalcoholic fatty liver disease, is a common symptom observed in patients with gout/hyperuricaemia. However, the exact mechanisms are still unclear. There is ongoing controversy about whether representative agents like colchicine and febuxostat, commonly used to manage gout, could also help prevent the liver injury. Liver plays a crucial role in uric acid (UA) production and lipid metabolism. Thus, the study aimed to investigate the aberrant lipid metabolism in the liver during injury and the effects of these drugs.

Methods: An advanced multi-dimensional mass spectrometry-based shotgun lipidomics technology was employed for class-targeted lipid analysis of cellular lipidomes in hepatic tissue of a gouty model induced by a combination of monosodium urate crystals and high-fat diet with or without treatment with colchicine and febuxostat. Serum UA, blood urea nitrogen, creatinine, proinflammatory cytokines, expression of AMP-activated protein kinase protein, footpad histopathology, and footpad swelling and pain threshold of these mice were assessed to evaluate the progression of gout.

Results: Lipidomics analysis clearly demonstrated that the ectopic fat accumulation as well as changes in fatty acyls composition in TAG pool, impaired mitochondrial function resulted by decreased tetra 18:2 cardiolipin, and reduced 4-hydroxyalkenal bioavailability in liver tissue could contribute to liver damage to the gouty model. Treatment with colchicine or febuxostat not only ameliorated gouty symptoms but also corrected these abnormal hepatic lipid metabolism patterns.

Conclusion: This study shed light on underlying mechanism(s) for liver injury in gout/hyperuricaemia and suggested that administration of drugs like colchicine and febuxostat could prevent liver injury.

背景:肝损伤(如非酒精性脂肪肝)是痛风/高尿酸血症患者的常见症状。然而,其确切机制仍不清楚。关于秋水仙碱和非布索坦等常用于控制痛风的代表性药物是否也有助于预防肝损伤,目前仍存在争议。肝脏在尿酸(UA)生成和脂质代谢中起着至关重要的作用。因此,本研究旨在探讨肝脏在损伤期间的异常脂质代谢以及这些药物的影响:方法:采用先进的基于多维质谱的枪式脂质组学技术,对单钠尿酸盐结晶和高脂饮食联合诱导或不联合秋水仙碱和非布索坦治疗的痛风模型肝组织中的细胞脂质体进行类靶脂质分析。对这些小鼠的血清尿酸、血尿素氮、肌酐、促炎细胞因子、AMP激活蛋白激酶蛋白的表达、足垫组织病理学、足垫肿胀和痛阈进行了评估,以评价痛风的进展:脂质组学分析清楚地表明,异位脂肪堆积、TAG池中脂肪酸酰基组成的变化、线粒体功能受损导致的四18:2心磷脂减少以及肝组织中4-羟基烯醛生物利用率的降低都可能导致痛风模型的肝损伤。使用秋水仙碱或非布司他治疗不仅能改善痛风症状,还能纠正这些异常的肝脂代谢模式:本研究揭示了痛风/高尿酸血症肝损伤的潜在机制,并建议服用秋水仙碱和非布索坦等药物可预防肝损伤。
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引用次数: 0
Diagnostic and Prognostic Value of Soluble Triggering Receptor Expressed on Myeloid Cells-1 (sTREM-1) for Septic Cardiomyopathy. 髓系细胞上表达的可溶性触发受体-1 (sTREM-1)对脓毒性心肌病的诊断和预后价值
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-29 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S481792
Jiamin Yu, Yongxia Chen, Xiaoyan Pan, Ji Chen, Zhenhua Mai, Yuanli Zhang, Xiaoyan Wang, Gaosheng Zhou, Sayed Adam Bukhari, Daqing Ma, Liehua Deng

Purpose: The early diagnosis of septic cardiomyopathy remains a challenge. The present work aims to evaluate the diagnostic and prognostic value of plasma soluble triggering receptor expressed on myeloid cells-1 (sTREM-1) levels in septic cardiomyopathy when compared with traditional myocardial biomarkers.

Methods: In the 143 sepsis enrolled patients, 67 and 76 patients were classified as non-septic cardiomyopathy and septic cardiomyopathy, respectively. Their blood samples were harvested up to 14th day after hospital admission for measurements of sTREM-1 and other biomarkers, such as N-terminal pronatriuretic peptide (NT-proBNP), highly sensitive troponin (TNT-HS), myoglobin (MYO), creatine kinase isoenzyme (CK-MB), etc. All the data were collected at 8:00 a.m. The area under the receiver operating characteristic curve was obtained to assess the diagnostic accuracy of those biomarkers. The Log rank test was utilized to evaluate the prognostic value of sTREM-1 on septic cardiomyopathy.

Results: Circulating sTREM-1 showed a high specificity (88.1%) and moderate sensitivity (64.5%) to distinguish patients with septic cardiomyopathy in the 143 septic patients. The diagnostic efficiency of sTREM-1 was higher than inflammatory biomarkers and traditional myocardial markers. Logistic regression revealed that plasma sTREM-1 was an independent predictor of septic cardiomyopathy. Furthermore, in the whole septic cardiomyopathy cohorts, the sTREM-1 levels in the non-survivors were significantly higher than those of survivors during ICU stay. In addition, the left ventricular systolic dysfunction had a high odds ratio (3.968) to predict 90-day mortality in septic patients with cardiomyopathy.

Conclusion: High plasma sTREM-1 level may be a diagnostic marker in predicting ICU poor outcome of patients with septic cardiomyopathy.

目的:脓毒性心肌病的早期诊断仍是一项挑战。本研究旨在评估脓毒性心肌病患者血浆可溶性髓系细胞触发受体-1(sTREM-1)水平与传统心肌生物标志物的诊断和预后价值:在 143 名脓毒症患者中,分别有 67 名和 76 名患者被归类为非脓毒症心肌病和脓毒症心肌病。在入院后第 14 天采集他们的血液样本,用于测量 sTREM-1 和其他生物标记物,如 N 端代三尖瓣肽(NT-proBNP)、高敏感肌钙蛋白(TNT-HS)、肌红蛋白(MYO)、肌酸激酶同工酶(CK-MB)等。所有数据均于上午 8:00 收集。接收者操作特征曲线下面积用于评估这些生物标志物的诊断准确性。利用对数秩检验评估 sTREM-1 对脓毒症心肌病的预后价值:结果:在143例脓毒症患者中,循环sTREM-1在鉴别脓毒症心肌病患者方面显示出较高的特异性(88.1%)和中等的敏感性(64.5%)。sTREM-1的诊断效率高于炎症生物标志物和传统心肌标志物。逻辑回归显示,血浆 sTREM-1 是脓毒症心肌病的独立预测指标。此外,在整个脓毒性心肌病队列中,非存活者在重症监护室住院期间的 sTREM-1 水平明显高于存活者。此外,左心室收缩功能障碍预测脓毒症心肌病患者90天死亡率的几率很高(3.968):结论:高血浆 sTREM-1 水平可能是预测脓毒症心肌病患者重症监护室不良预后的诊断指标。
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引用次数: 0
Development and Verification of Diagnosis Model for Papillary Thyroid Cancer Based on Pyroptosis-Related Genes: A Bioinformatic and in vitro Investigation. 基于嗜热相关基因的甲状腺乳头状癌诊断模型的开发与验证:生物信息学和体外研究。
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-29 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S478989
Lingling Ding, Guowan Zheng, Aoni Zhou, Fahuan Song, Lei Zhu, Yefeng Cai, Yehao Guo, Tebo Hua, Yunye Liu, Wenli Ma, Yiqun Hu, Yawen Guo, Chuanming Zheng

Background: The incidence of papillary thyroid cancer (PTC) has been increasing annually; however, early diagnosis can improve patient outcomes. Pyroptosis is a programmed cell death modality that has received considerable attention recently. However, no studies have reported using pyroptosis-related genes in PTC diagnosis.

Methods: Analyzed 33 pyroptosis-related genes in PTC transcriptome data from the Gene Expression Omnibus database. Subsequently, used the Least Absolute Shrinkage and Selection Operator (LASSO) model to construct a PTC molecular diagnostic model. Furthermore, confirmed differences in the expression of five genes between PTC and non-tumor tissues using immunohistochemistry. Collected 338 PTC and control samples to construct a five-gene PTC diagnostic model, which was then validated using a training set and underwent correlation analysis with immune cell infiltration. Additionally, validated the biological functions of the core gene NOD1 in vitro.

Results: The five-gene PTC diagnostic model demonstrated good diagnostic value for PTC. Moreover, identified three reliable subtypes of pyroptosis and found that NOD1 is involved in tumor-suppressive microenvironment formation. Notably, patients with high NOD1 expression had lower Progression-Free Survival (PFS). Additionally, NOD1 expression was positively correlated with immune markers such as CD47, CD68, CD3, and CD8. Lastly, inhibiting NOD1 showed significant anti-PTC activity in vitro.

Conclusion: Our results suggest that pyroptosis-related genes can be used for PTC diagnosis, and NOD1 could be a promising therapeutic target.

背景:甲状腺乳头状癌(PTC)的发病率逐年上升,然而,早期诊断可以改善患者的预后。热蛋白沉积是一种程序性细胞死亡方式,近来受到广泛关注。然而,还没有研究报告称在诊断PTC时使用了与化脓相关的基因:方法:分析基因表达总库(Gene Expression Omnibus)PTC转录组数据中的33个与化脓相关的基因。随后,使用最小绝对收缩和选择操作器(LASSO)模型构建了 PTC 分子诊断模型。此外,还利用免疫组化方法证实了 PTC 和非肿瘤组织中五个基因的表达差异。收集 338 个 PTC 和对照样本,构建五基因 PTC 诊断模型,然后使用训练集进行验证,并与免疫细胞浸润进行相关性分析。此外,还在体外验证了核心基因 NOD1 的生物学功能:结果:五基因 PTC 诊断模型对 PTC 具有良好的诊断价值。结果:五基因 PTC 诊断模型对 PTC 有很好的诊断价值,而且确定了三种可靠的热病亚型,并发现 NOD1 参与了肿瘤抑制性微环境的形成。值得注意的是,NOD1高表达的患者无进展生存期(PFS)较低。此外,NOD1的表达与CD47、CD68、CD3和CD8等免疫标记物呈正相关。最后,抑制NOD1在体外显示出显著的抗PTC活性:我们的研究结果表明,热蛋白沉积相关基因可用于 PTC 诊断,而 NOD1 可能是一个很有前景的治疗靶点。
{"title":"Development and Verification of Diagnosis Model for Papillary Thyroid Cancer Based on Pyroptosis-Related Genes: A Bioinformatic and in vitro Investigation.","authors":"Lingling Ding, Guowan Zheng, Aoni Zhou, Fahuan Song, Lei Zhu, Yefeng Cai, Yehao Guo, Tebo Hua, Yunye Liu, Wenli Ma, Yiqun Hu, Yawen Guo, Chuanming Zheng","doi":"10.2147/JIR.S478989","DOIUrl":"10.2147/JIR.S478989","url":null,"abstract":"<p><strong>Background: </strong>The incidence of papillary thyroid cancer (PTC) has been increasing annually; however, early diagnosis can improve patient outcomes. Pyroptosis is a programmed cell death modality that has received considerable attention recently. However, no studies have reported using pyroptosis-related genes in PTC diagnosis.</p><p><strong>Methods: </strong>Analyzed 33 pyroptosis-related genes in PTC transcriptome data from the Gene Expression Omnibus database. Subsequently, used the Least Absolute Shrinkage and Selection Operator (LASSO) model to construct a PTC molecular diagnostic model. Furthermore, confirmed differences in the expression of five genes between PTC and non-tumor tissues using immunohistochemistry. Collected 338 PTC and control samples to construct a five-gene PTC diagnostic model, which was then validated using a training set and underwent correlation analysis with immune cell infiltration. Additionally, validated the biological functions of the core gene NOD1 in vitro.</p><p><strong>Results: </strong>The five-gene PTC diagnostic model demonstrated good diagnostic value for PTC. Moreover, identified three reliable subtypes of pyroptosis and found that NOD1 is involved in tumor-suppressive microenvironment formation. Notably, patients with high NOD1 expression had lower Progression-Free Survival (PFS). Additionally, NOD1 expression was positively correlated with immune markers such as CD47, CD68, CD3, and CD8. Lastly, inhibiting NOD1 showed significant anti-PTC activity in vitro.</p><p><strong>Conclusion: </strong>Our results suggest that pyroptosis-related genes can be used for PTC diagnosis, and NOD1 could be a promising therapeutic target.</p>","PeriodicalId":16107,"journal":{"name":"Journal of Inflammation Research","volume":"17 ","pages":"7761-7776"},"PeriodicalIF":4.2,"publicationDate":"2024-10-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11531300/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142568476","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Intraperitoneal MASP-1 Levels are Associated with Peritoneal Solute Transport Rate in Peritoneal Dialysis Patients: A Retrospective Cohort Study. 腹膜内 MASP-1 水平与腹膜透析患者的腹膜溶质转运率有关:一项回顾性队列研究。
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-29 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S486011
Jianzhong Li, Yan Xiong, Mingyu Chen, Deyu Xu, Ling Zhou, Lei Shen, Guoyuan Lu

Purpose: A major limitation of long-term peritoneal dialysis (PD) is peritoneal membrane dysfunction characterized by faster peritoneal solute-transport rate (PSTR). This study aimed to identify efficient complement factors in peritoneal effluents of continuous ambulatory peritoneal dialysis (CAPD) patients that can predict the PSTR.

Methods: A multiplex suspension protein array was used to screened related complement pathways in overnight peritoneal effluents among 58 CAPD patients. Then the related complement factors in lectin and classical pathways in effluents were analyzed using ELISA kits among another cohort of 129 CAPD patients. Logistic regression modeling was fitted to predict the PSTR of PD patients.

Results: The multiplex suspension protein array showed complement factors including C2, C4b, C5, C5a, Factor D, Factor I, and MBL were detected in effluents of CAPD patients, and the effluent C2 Appearance rate (Ar) and C4b Ar levels were significantly correlated with D/P Cr and D/D0 glucose. The levels of effluents MASP-1 Ar, M-Ficolin Ar, C2 Ar and C4b Ar, which belong to the lectin pathway were also positively correlated with D/P Cr according the ELISA results and these parameters were expressed higher in the high and high-average (H/HA) groups according to the PET results. Moreover, effluent Masp-1 was independently associated with increased PSTR and adverse events related peritoneal transport function failure.

Conclusion: This study suggested that the lectin pathway may be involved in local complement activation and peritoneal injury of PD patients, intraperitoneal level of Masp-1 was an independent predictor of increased PSTR in PD patients.

目的:长期腹膜透析(PD)的一个主要限制因素是以腹膜溶质转运率(PSTR)加快为特征的腹膜功能障碍。本研究旨在确定连续不卧床腹膜透析(CAPD)患者腹膜流出液中可预测PSTR的有效补体因子:方法:采用多重悬浮蛋白阵列筛选了58名CAPD患者隔夜腹膜流出液中的相关补体途径。然后用酶联免疫吸附试剂盒分析了另一批 129 名 CAPD 患者腹水中凝集素和经典途径的相关补体因子。结果表明,多重悬浮蛋白阵列显示,补体蛋白和经典途径中的补体因子在腹腔积液中的分布与腹腔积液中的补体因子有关:结果:多重悬浮蛋白阵列显示,CAPD 患者的流出物中检测到了补体因子,包括 C2、C4b、C5、C5a、因子 D、因子 I 和 MBL,流出物中的 C2 显现率(Ar)和 C4b Ar 水平与 D/P Cr 和 D/D0 葡萄糖显著相关。根据酶联免疫吸附试验的结果,属于凝集素途径的流出物 MASP-1 Ar、M-Ficolin Ar、C2 Ar 和 C4b Ar 的水平也与 D/P Cr 呈正相关,而根据 PET 的结果,这些参数在高水平组和高平均水平组(H/HA)中表达较高。此外,流出的 Masp-1 与 PSTR 增加和腹膜转运功能衰竭相关的不良事件独立相关:这项研究表明,凝集素通路可能参与了腹膜透析患者的局部补体激活和腹膜损伤,腹腔内的Masp-1水平是腹膜透析患者PSTR增加的独立预测因子。
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引用次数: 0
Safety Evaluation of a Potential Anti-Rheumatoid Arthritis Candidate, Levamisole. 抗类风湿关节炎候选药物左旋咪唑的安全性评估
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-29 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S477013
Jun-Xiang Wang, Jia-Hui Zhang, Mu Guo, Wei-Rui Huang, Han-Lu Zheng, Yi-Qi Liao, Ying-Xue Yan, Zhao-Long Lin, Neng-Fu Qiu, Cui-Ting Dai, Xiang-Bin Yu, Yue Yu

Introduction: Given the limitations and adverse effects of current rheumatoid arthritis (RA) treatments, there is an urgent need for safer and more effective therapeutic options. Levamisole (LVM) is a non-specific immunomodulator with potential for treating skin diseases, tumors, and autoimmune disorders. Recognizing LVM's potential despite its controversial reputation, this study aimed to investigate its safety profile and therapeutic efficacy towards RA.

Methods: To evaluate the potential toxicity of LVM, a 28-day oral administration was conducted in SD rats, assessing general toxicity and neurotoxicity using serum biochemical indicators, the Morris water maze test, transmission electron microscopy, and H&E staining. Subsequently, the therapeutic effects of LVM on RA were evaluated.

Results: The results showed that 30 mg/kg LVM has promising therapeutic effects in the treatment of RA with negligible toxicity from 45 mg/kg to 180 mg/kg.

Discussions: This study provides valuable preclinical data on the safety and efficacy of LVM, laying the groundwork for future clinical applications and potentially offering a safer and more effective treatment option for RA patients.

导言:鉴于目前类风湿性关节炎(RA)治疗方法的局限性和不良反应,迫切需要更安全、更有效的治疗方案。左旋咪唑(LVM)是一种非特异性免疫调节剂,具有治疗皮肤病、肿瘤和自身免疫性疾病的潜力。尽管左旋咪唑的声誉备受争议,但它仍具有潜力,因此本研究旨在调查其安全性及其对 RA 的疗效:为了评估LVM的潜在毒性,研究人员对SD大鼠进行了为期28天的口服给药,并使用血清生化指标、莫里斯水迷宫试验、透射电子显微镜和H&E染色法评估其一般毒性和神经毒性。随后,评估了 LVM 对 RA 的治疗效果:结果表明,30 mg/kg LVM 对治疗 RA 具有良好的疗效,45 mg/kg 至 180 mg/kg LVM 的毒性可忽略不计:本研究为 LVM 的安全性和有效性提供了宝贵的临床前数据,为未来的临床应用奠定了基础,并有可能为 RA 患者提供更安全、更有效的治疗选择。
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引用次数: 0
Transcriptomic Insights into Hub Genes, Immune Infiltration, and Candidate Drugs in Erosive Esophagitis. 从转录组学洞察侵蚀性食管炎的枢纽基因、免疫渗透和候选药物
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-28 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S479032
Ye Zhao, Xi Chen, Yuhan Huang, Zhihan Zhang, Kui Wang, Duowu Zou, Teng Ma

Purpose: This study aimed to investigate gene expression profiles, identify potential hub genes, and predict drugs for patients with erosive esophagitis (EE). Despite its clinical significance, molecular-level exploration of this condition has been limited.

Patients and methods: RNA sequencing was performed on clinical biopsy samples from eight EE patients and eight healthy controls. Integrated bioinformatic tools were then utilized to analyze the data, including functional enrichment analysis, protein-protein interaction network analysis, weighted gene co-expression network analysis, immune infiltration analysis, and identification of small-molecule compounds. Additionally, the expressions of the identified hub genes were assessed in clinical samples.

Results: A total of 2801 genes with differential expression were identified, including four potential hub genes: SOX9, SPP1, TIMP1, and TLR4. Moreover, the overexpression of these hub genes was verified in clinical samples. Analysis of Immune infiltration indicated an imbalance in the distribution of immune cell types in patients with EE. Correlation analysis between immune cells and hub genes unveiled noteworthy relationships. Specifically, SOX9 exhibited a negative correlation with CD8 T cells but a positive correlation with resting memory CD4 T cells. SPP1 displayed a positive correlation with naïve B cells, while TIMP1 exhibited a negative correlation with resting dendritic cells. Furthermore, the study identified ten small-molecule drugs with potential therapeutic effects for EE, including loreclezole and mercaptopurine.

Conclusion: This study provides valuable insights into the molecular understanding of EE, offering new perspectives on disease mechanisms. The findings may inspire further research leading to the development of novel treatment strategies for EE.

目的:本研究旨在调查侵蚀性食管炎(EE)患者的基因表达谱、识别潜在的枢纽基因并预测药物。尽管侵蚀性食管炎具有重要的临床意义,但对其进行分子水平的研究却十分有限:对八名侵蚀性食管炎患者和八名健康对照者的临床活检样本进行了 RNA 测序。然后利用综合生物信息学工具分析数据,包括功能富集分析、蛋白质-蛋白质相互作用网络分析、加权基因共表达网络分析、免疫浸润分析和小分子化合物鉴定。此外,还评估了已确定的枢纽基因在临床样本中的表达情况:结果:共鉴定出 2801 个差异表达基因,其中包括四个潜在的中心基因:结果:共鉴定出 2801 个差异表达基因,其中包括四个潜在的中心基因:SOX9、SPP1、TIMP1 和 TLR4。此外,这些中心基因在临床样本中的过表达也得到了验证。免疫浸润分析表明,EE 患者的免疫细胞类型分布失衡。免疫细胞与中心基因之间的相关性分析揭示了值得注意的关系。具体来说,SOX9 与 CD8 T 细胞呈负相关,但与静息记忆 CD4 T 细胞呈正相关。SPP1 与幼稚 B 细胞呈正相关,而 TIMP1 则与静息树突状细胞呈负相关。此外,研究还发现了十种对 EE 有潜在治疗作用的小分子药物,包括洛雷克唑和巯嘌呤:本研究为了解 EE 的分子机制提供了宝贵的见解,为疾病机制提供了新的视角。结论:这项研究为了解 EE 的分子机理提供了宝贵的见解,为疾病机制提供了新的视角。研究结果可能会激发进一步的研究,从而开发出治疗 EE 的新策略。
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引用次数: 0
Development of a Prognosis Prediction Model for Pediatric Sepsis Based on the NLPR. 基于 NLPR 开发小儿败血症预后预测模型
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-28 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S479660
Huabin Wang, Rui Zhang, Jing Xu, Min Zhang, Xueyun Ren, Yuhui Wu

Objective: Identifying high-risk children with poor prognoses during the early stages of sepsis and providing timely and appropriate interventions are imperative. The objective of this study was to develop a prognostic prediction model for pediatric sepsis utilizing the neutrophil to lymphocyte and platelet ratio (NLPR).

Methods: A multivariable logistic regression analysis was conducted to investigate the association between the NLPR and in-hospital mortality among septic children upon admission. To minimize the potential confounding factors that could introduce bias, a propensity score matching analysis was employed. Subsequently, a nomogram prediction model was developed to assess the risk of in-hospital mortality in septic children, incorporating the NLPR as a key factor. The performance of this prediction model was then evaluated.

Results: A total of 230 septic children were enrolled in the study. Multivariate logistic regression analysis revealed that the NLPR was an independent risk factor for in-hospital mortality, with an odds ratio of 8.31 (95% CI 3.69-18.68). The finding remained consistent after propensity score matching analysis. A nomogram prediction model was developed that incorporates the NLPR, arterial blood lactate level, and Pediatric Critical Illness Score (PCIS). Among the various models, this nomogram exhibited the highest area under the curve (AUC) value of 0.831. The calibration curve demonstrated good agreement between the predicted and observed outcomes. Decision curve analysis indicated that the prediction model outperformed the PCIS. Internal validation of the model yielded an AUC value of 0.824 and a kappa value of 0.420, indicating its reliability and accuracy.

Conclusion: The NLPR serves as an independent risk factor for in-hospital mortality among septic children. The nomogram prognostic prediction model could effectively guide clinicians in accurately predicting the prognosis of septic children, thus enabling timely and effective treatment interventions.

目的:在败血症早期阶段识别预后不良的高危儿童并提供及时、适当的干预措施势在必行。本研究旨在利用中性粒细胞与淋巴细胞和血小板比值(NLPR)建立小儿败血症预后预测模型:方法: 采用多变量逻辑回归分析,研究脓毒症患儿入院时中性粒细胞与淋巴细胞和血小板比值与院内死亡率之间的关系。为尽量减少可能造成偏差的潜在混杂因素,采用了倾向得分匹配分析。随后,将 NLPR 作为一个关键因素,建立了一个提名图预测模型来评估脓毒症患儿的院内死亡风险。然后对该预测模型的性能进行了评估:共有 230 名脓毒症患儿参与了研究。多变量逻辑回归分析显示,NLPR是院内死亡的独立风险因素,其几率比为8.31(95% CI 3.69-18.68)。在进行倾向评分匹配分析后,这一结果仍保持一致。结合 NLPR、动脉血乳酸水平和儿科危重病评分(PCIS)建立了一个提名图预测模型。在各种模型中,该提名图的曲线下面积(AUC)值最高,为 0.831。校准曲线显示,预测结果与观察结果之间具有良好的一致性。决策曲线分析表明,预测模型优于 PCIS。模型内部验证的 AUC 值为 0.824,kappa 值为 0.420,表明其可靠性和准确性:结论:NLPR是脓毒症患儿院内死亡的独立风险因素。结论:NLPR是脓毒症患儿院内死亡的独立风险因素,提名图预后预测模型可有效指导临床医生准确预测脓毒症患儿的预后,从而进行及时有效的治疗干预。
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引用次数: 0
MMP-12 and Periodontitis: Unraveling the Molecular Pathways of Periodontal Tissue Destruction. MMP-12 与牙周炎:揭示牙周组织破坏的分子途径。
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-28 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S480466
Bingpeng Lin, Yufei Fan, Xuechao Yang, Janak L Pathak, Mei Zhong

Periodontal disease is a common disorder affecting a wide range of people and has a high prevalence globally. Periodontitis comprises a series of inflammatory conditions affecting periodontal support tissue, which could ultimately lead to tooth loss and reduce life quality and add to the financial burden of society. Matrix metalloproteinase-12 (MMP-12) is an elastase that is produced mostly by macrophages and could degrade a wide spectrum of extracellular matrix (ECM) and also contribute to several systematic pathological conditions. Recently, researchers have reported higher expression of MMP-12 in chronic periodontitis patients. However, there are few reports on the role of MMP-12 in periodontitis pathogenicity, and the interaction between MMP-12, periodontal pathogens, and periodontal tissues remains unclear. In this review, we introduce the potentially unique role of MMP-12 in the context of periodontal inflammation earlier, summarize the possible effects of MMP-12 on the pathological process of periodontitis and the interaction of host response under the challenge of various inflammatory factors, and provide possible diagnostic and therapeutic strategies targeting MMP-12 for the management of periodontitis. Future research and policies should focus on and implement effective chairside testing methods to reduce the prevalence of periodontal diseases.

牙周病是一种影响广泛的常见疾病,在全球发病率很高。牙周炎包括一系列影响牙周支持组织的炎症,最终可能导致牙齿脱落,降低生活质量,加重社会经济负担。基质金属蛋白酶-12(MMP-12)是一种弹性蛋白酶,主要由巨噬细胞产生,可降解多种细胞外基质(ECM),也是多种系统性病症的诱因。最近,研究人员发现慢性牙周炎患者的 MMP-12 表达量较高。然而,关于 MMP-12 在牙周炎致病性中的作用的报道很少,而且 MMP-12、牙周病原体和牙周组织之间的相互作用仍不清楚。在这篇综述中,我们较早地介绍了MMP-12在牙周炎症中的潜在独特作用,总结了MMP-12对牙周炎病理过程的可能影响以及在各种炎症因子挑战下宿主反应的相互作用,并提供了针对MMP-12的可能诊断和治疗策略,以治疗牙周炎。未来的研究和政策应关注并实施有效的椅旁检测方法,以降低牙周疾病的患病率。
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引用次数: 0
Moderate Hypothermia Alleviates Sepsis-Associated Acute Lung Injury by Suppressing Ferroptosis Induced by Excessive Inflammation and Oxidative Stress via the Keap1/GSK3β/Nrf2/GPX4 Signaling Pathway. 中度低温通过Keap1/GSK3β/Nrf2/GPX4信号通路抑制过度炎症和氧化应激诱导的铁蛋白沉积,从而缓解败血症相关的急性肺损伤
IF 4.2 2区 医学 Q2 IMMUNOLOGY Pub Date : 2024-10-25 eCollection Date: 2024-01-01 DOI: 10.2147/JIR.S491885
Jie Xu, Liujun Tao, Liangyan Jiang, Jie Lai, Juntao Hu, Zhanhong Tang

Purpose: Sepsis-associated acute lung injury (SA-ALI) is a common complication in patients with sepsis, contributing to high morbidity and mortality. Excessive inflammation and oxidative stress are crucial contributors to lung injury in sepsis. This study aims to examine the protective effects of moderate hypothermia on SA-ALI and explore the underlying mechanisms.

Methods: Sepsis was induced in rats through cecal ligation and puncture followed by intervention with moderate hypothermia (32-33.9°C). Blood, bronchoalveolar lavage fluid, and lung tissues were collected 12 hours post-surgery. Inflammatory responses, oxidative injury, SA-ALI-related pathophysiological processes, and Keap1/GSK3β/Nrf2/GPX4 signaling in septic rats were observed by ELISA, lung W/D ratio, immunohistochemistry, immunofluorescence, histological staining, Western blotting, RT-qPCR, and TEM assays.

Results: Moderate hypothermia treatment alleviated lung injury in septic rats, reflected in amelioration of pathological changes in lung structure and improved pulmonary function. Further, moderate hypothermia reduced arterial blood lactate production and suppressed the expression of inflammatory factors IL-1β, IL-6, and TNF-α; downregulated ROS, MDA, and redox-active iron levels; and restored GSH and SOD content. TEM results demonstrated that moderate hypothermia could mitigate ferroptosis in PMVECs within lung tissue. The underlying mechanism may involve regulation of the Keap1/Nrf2/SLC7A11/GPX4 signaling pathway, with the insulin pathway PI3K/Akt/GSK3β also playing a partial role.

Conclusion: Collectively, we illustrated a novel potential therapeutic mechanism in which moderate hypothermia could alleviate ferroptosis induced by excessive inflammation and oxidative stress via the regulation of Keap1/GSK3β/Nrf2/GPX4 expression, hence ameliorating acute lung injury in sepsis.

目的:脓毒症相关急性肺损伤(SA-ALI)是脓毒症患者常见的并发症,可导致高发病率和高死亡率。过度炎症和氧化应激是导致败血症肺损伤的关键因素。本研究旨在研究中度低温对 SA-ALI 的保护作用,并探索其潜在机制:方法:通过盲肠结扎和穿刺诱导大鼠发生败血症,然后进行中度低体温(32-33.9°C)干预。术后 12 小时收集血液、支气管肺泡灌洗液和肺组织。通过ELISA、肺W/D比值、免疫组织化学、免疫荧光、组织学染色、Western印迹、RT-qPCR和TEM检测,观察脓毒症大鼠的炎症反应、氧化损伤、SA-ALI相关病理生理过程和Keap1/GSK3β/Nrf2/GPX4信号传导:结果:中度低温治疗减轻了脓毒症大鼠的肺损伤,体现在肺结构的病理变化得到改善,肺功能得到提高。此外,中度低温还能减少动脉血乳酸的产生,抑制炎症因子 IL-1β、IL-6 和 TNF-α 的表达;降低 ROS、MDA 和氧化还原活性铁的水平;恢复 GSH 和 SOD 的含量。TEM结果表明,适度低温可减轻肺组织内PMVECs的铁突变。其潜在机制可能涉及对Keap1/Nrf2/SLC7A11/GPX4信号通路的调节,胰岛素通路PI3K/Akt/GSK3β也发挥了部分作用:总之,我们阐明了一种新的潜在治疗机制,即适度低温可通过调节Keap1/GSK3β/Nrf2/GPX4的表达,减轻过度炎症和氧化应激诱导的铁蛋白沉积,从而改善脓毒症急性肺损伤。
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引用次数: 0
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Journal of Inflammation Research
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