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Vaccination of Mice with Listeria ivanovii Expressing the Truncated M Protein of Porcine Reproductive and Respiratory Syndrome Virus Induces both Antigen-Specific CD4+ and CD8+ T Cell-Mediated Immunity. 用表达猪生殖与呼吸综合征病毒M蛋白的伊万诺氏李斯特菌接种小鼠可诱导抗原特异性CD4+和CD8+ T细胞介导的免疫
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2020-04-14 DOI: 10.1159/000506686
Tian Tang, Chuan Wang, Qikang Pu, Jinmei Peng, Sijing Liu, Chenyan Ren, Mingjuan Jiang, Zhijun Tian

Porcine reproductive and respiratory syndrome (PRRS), a serious disease of swine caused by the PRRS virus (PRRSV), had a severe economic impact worldwide. As commonly used PRRS vaccines, the attenuated or inactivated vaccines, provide unsatisfactory immune protection, a new PRRS vaccine is urgently needed. In this study, a part of the PRRSV ORF6 gene (from 253 to 519 bp) encoding the hydrophilic domain of PRRSV M protein was integrated into two Listeria strains via homologous recombination to generate two PRRS vaccine candidates, namely LI-M' and LM-ΔactAplcB-M'. Both candidate vaccines showed similar growth rate as their parent strains in culture media, but presented different bacterial loads in target organs. As the integrated heterogenous gene was not expressed, LM-ΔactAplcB-M' was excluded from the immunological test. In a mouse model, LI-M' provoked both CD4+ and CD8+ T cell-mediated immunity. In addition, LI-M' boosting dramatically enhanced CD8+ T cell-mediated immunity without affecting the response intensity of CD4+ T cell-mediated immunity. All of these data suggest that LI-M' is a promising PRRS vaccine candidate.

猪繁殖与呼吸综合征(PRRS)是由猪繁殖与呼吸综合征病毒(PRRSV)引起的一种严重的猪疾病,在世界范围内造成了严重的经济影响。由于目前常用的PRRS减毒疫苗和灭活疫苗的免疫保护效果不理想,迫切需要一种新的PRRS疫苗。本研究将PRRSV ORF6基因中编码PRRSV M蛋白亲水结构域的部分(253 ~ 519 bp)通过同源重组整合到两株李斯特菌中,生成了LI-M'和LM-ΔactAplcB-M'两种PRRSV候选疫苗。两种候选疫苗在培养基中的生长速度与其亲本菌株相似,但在靶器官中的细菌负荷不同。由于整合的异质基因未表达,因此将LM-ΔactAplcB-M’排除在免疫检测之外。在小鼠模型中,LI-M'激发CD4+和CD8+ T细胞介导的免疫。此外,LI-M的增强显著增强了CD8+ T细胞介导的免疫,而不影响CD4+ T细胞介导的免疫应答强度。所有这些数据表明LI-M'是一种很有前途的PRRS候选疫苗。
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引用次数: 1
Immunogenicity Evaluation of Chimeric Subunit Vaccine Comprising Adhesion Coli Surface Antigens from Enterotoxigenic Escherichia coli. 产肠毒素大肠杆菌黏附大肠杆菌表面抗原嵌合亚单位疫苗的免疫原性评价
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2020-07-09 DOI: 10.1159/000509708
Dorna Khoobbakht, Shohreh Zare Karizi, Mohammad Javad Motamedi, Rouhollah Kazemi, Pooneh Roghanian, Jafar Amani

Enterotoxigenic Escherichia coli (ETEC) is the most common agent of diarrhea morbidity in developing countries. ETEC adheres to host intestinal epithelial cells via various colonization factors. The CooD and CotD proteins play a significant role in bacteria binding to the intestinal epithelial cells as adhesin tip subunits of CS1 and CS2 pili. The purpose here was to design a new construction containing cooD and cotD genes and use several types of bioinformatics software to predict the structural and immunological properties of the designed antigen. The fusion gene was synthesized with codon bias of E. coli in order to increase the expression level of the protein. The amino acid sequences, protein structure, and immunogenicity properties of potential antigens were analyzed in silico. The chimeric protein was expressed in E. coliBL21 (DE3). The antigenicity of the recombinant proteins was verified by Western blotting and ELISA. In order to assess the induced immunity, the immunized mice were challenged with wild-type ETEC by an intraperitoneal route. Immunological analyses showed the production of a high titer of IgG serum with no sign of serum-mucosal IgA antibody response. The result of the challenge assay showed that 30% of immunized mice survived. The results of this study showed that CooD-CotD recombinant protein can stimulate immunity against ETEC. The designed chimera could be a prototype for the subunit vaccine, which is worthy of further consideration.

产肠毒素大肠杆菌(ETEC)是发展中国家最常见的腹泻病原体。ETEC通过多种定殖因子附着在宿主肠上皮细胞上。作为黏附蛋白CS1和CS2毛的黏附蛋白端亚基,ood和CotD蛋白在细菌与肠上皮细胞的结合中起重要作用。本文的目的是设计一个含有good和cotD基因的新结构,并使用几种生物信息学软件来预测设计抗原的结构和免疫学特性。利用大肠杆菌密码子偏向性合成融合基因,以提高该蛋白的表达水平。用计算机分析了潜在抗原的氨基酸序列、蛋白质结构和免疫原性。该嵌合蛋白在大肠杆菌bl21 (DE3)中表达。重组蛋白的抗原性经Western blotting和ELISA验证。为评价免疫小鼠的诱导免疫效果,采用野生型ETEC腹腔刺激法。免疫学分析显示产生高滴度的IgG血清,没有血清-粘膜IgA抗体反应的迹象。攻毒试验结果显示,30%的免疫小鼠存活。本研究结果表明,CooD-CotD重组蛋白可刺激对ETEC的免疫。所设计的嵌合体可作为亚单位疫苗的原型,值得进一步研究。
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引用次数: 1
Non-Caloric Artificial Sweeteners Modulate the Expression of Key Metabolic Genes in the Omnipresent Gut Microbe Escherichia coli. 无热量人工甜味剂调节无处不在的肠道微生物大肠杆菌关键代谢基因的表达。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2019-12-18 DOI: 10.1159/000504511
Rizwan Mahmud, Saadlee Shehreen, Shayan Shahriar, Md Siddiqur Rahman, Sharif Akhteruzzaman, Abu Ashfaqur Sajib

The human gut is inhabited by several hundred different bacterial species. These bacteria are closely associated with our health and well-being. The composition of these diverse commensals is influenced by our dietary intakes. Non-caloric artificial sweeteners (NAS) have gained global popularity, particularly among diabetic patients, due to their perceived health benefits, such as reduction of body weight and maintenance of blood glucose level compared to caloric sugars. Recent studies have reported that these artificial sweeteners can alter the composition of gut microbiota and, thus, affect our normal physiological state. Here, we investigated the effect of aspartame and acesulfame potassium (ace-K), two popular NAS, in a commercial formulation on the growth and metabolic pathways of omnipresent gut commensal Escherichia coliby analyzing the relative expression levels of the key genes, which control over twenty important metabolic pathways. Treatment with NAS preparation (aspartame and ace-K) modulates the growth of E. colias well as inducing the expression of important metabolic genes associated with glucose (pfkA, sucA, aceE, pfkB, lpdA), nucleotide (tmk, adk, tdk, thyA), and fatty acid (fabI) metabolisms, among others. Several of the affected geneswere previously reported to be important for the colonization of the microbes in the gut. These findings may shed light on the mechanism of alteration of gut microbes and their metabolism by NAS.

人类的肠道里生活着几百种不同的细菌。这些细菌与我们的健康和幸福密切相关。这些不同的共生体的组成受到我们饮食摄入量的影响。与含热量糖相比,无热量人工甜味剂(NAS)具有减轻体重和维持血糖水平等公认的健康益处,因此在全球范围内受到欢迎,尤其是在糖尿病患者中。最近的研究表明,这些人工甜味剂可以改变肠道微生物群的组成,从而影响我们的正常生理状态。本研究通过分析控制20多个重要代谢途径的关键基因的相对表达水平,研究了商业配方中常用的两种NAS——阿斯巴甜和乙酰磺胺钾(ace-K)对普遍存在的肠道共生大肠杆菌生长和代谢途径的影响。NAS制剂(阿斯巴甜和ace-K)可以调节大肠杆菌的生长,并诱导与葡萄糖(pfkA、sucA、aceE、pfkB、lpdA)、核苷酸(tmk、adk、tdk、thyA)和脂肪酸(fabI)代谢等相关的重要代谢基因的表达。一些受影响的基因先前被报道对微生物在肠道中的定植很重要。这些发现可能有助于揭示NAS改变肠道微生物及其代谢的机制。
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引用次数: 9
Production of Mycobacterium bovis Antigens Included in Recombinant Occlusion Bodies of Baculovirus. 杆状病毒重组闭塞体含牛分枝杆菌抗原的制备。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2020-04-07 DOI: 10.1159/000506687
Luciana Villafañe, Marina Andrea Forrellad, María Gabriela López, Sergio Garbaccio, Carlos Garro, Rosana Valeria Rocha, María Emilia Eirin, Mahavir Singh, Oscar A Taboga, Fabiana Bigi

Bovine tuberculosis (bTB) is a disease produced by Mycobacterium bovis that affects livestock, wild animals, and humans. The classical diagnostic method to detect bTB is measuring the response induced with the intradermal injection of purified protein derivative of M. bovis (PPDb). Another ancillary bTB test detects IFN-γ produced in whole blood upon stimulation with PPDb, protein/peptide cocktails, or individual antigens. Among the most used M. bovis antigens in IFN-γ assays are the secreted proteins ESAT-6 and CFP-10, which together with antigen Rv3615c improve the sensitivity of the test in comparison to PPDb. Protein reagents for immune stimulation are generally obtained from Escherichia coli, because this bacterium produces a high level of recombinant proteins. However, E. coli recombinant antigens are in general contaminated with lipopolysaccharides and other components that produce non-specific IFN-γ secretion in in vitro assays. In this work, we produced the relevant ESAT-6, CFP-10, and Rv3615c M. bovis antigens as fusions to the polyhedrin protein from the baculovirus AcMNPV. We obtained chimeric proteins effectively incorporated to the occlusion bodies and easily purified the recombinant polyhedra with no reactive contaminants. In an IFN-γ assay, these fusion proteins showed equivalent sensibility but better specificity than the same M. bovis proteins produced in E. coli.

牛结核病(bTB)是一种由牛分枝杆菌产生的疾病,影响牲畜、野生动物和人类。检测bTB的经典诊断方法是皮内注射纯化的牛分枝杆菌蛋白衍生物(PPDb)引起的反应。另一个辅助的bTB测试检测全血在PPDb、蛋白/肽鸡尾酒或单个抗原刺激下产生的IFN-γ。IFN-γ检测中使用最多的牛支原体抗原是分泌蛋白ESAT-6和CFP-10,它们与抗原Rv3615c一起,与PPDb相比,提高了检测的敏感性。用于免疫刺激的蛋白质试剂通常从大肠杆菌中获得,因为这种细菌产生高水平的重组蛋白。然而,在体外实验中,大肠杆菌重组抗原通常被脂多糖和其他产生非特异性IFN-γ分泌的成分污染。在这项工作中,我们制作了相关的ESAT-6、CFP-10和Rv3615c M. bovis抗原,作为与杆状病毒AcMNPV多面蛋白的融合体。我们得到的嵌合蛋白可以有效地结合到封闭体中,并且很容易纯化重组多面体,没有活性污染物。在IFN-γ实验中,这些融合蛋白与大肠杆菌中产生的相同的牛支原体蛋白具有相同的敏感性,但具有更好的特异性。
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引用次数: 3
Enhanced Fermentable Sugar Production from Enteromorpha Polysaccharides by the Crude Enzymes of Vibrio sp. H11. 利用H11弧菌粗酶提高浒苔多糖发酵产糖的研究。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2020-03-06 DOI: 10.1159/000505371
Jin Li, Yan Xu, Tao Peng, Mingqi Zhong, Zhong Hu

In recent years, large-scale outbreaks of the green alga Enteromorpha prolifera in China's offshore waters have posed a serious threat. This study aimed to improve Enteromorpha polysaccharide (EP) enzymatic sugar production using the hydrolase system of Vibrio sp. H11, an EP-utilizing microbial strain. Strain H11 was found to contain 711 carbohydrate-related genes, and 259 genes belong to glycoside hydrolases that have the potential to hydrolyze EP. To maximize the capability of strain H11 to hydrolyze EP, both the culture medium and the composition were optimized. Response surface methodology analysis showed that maximal enzymatic production from strain H11 was 8.43 U/mL after 26-h incubation. When 50 g/L of EP were treated with crude H11 enzyme, the concentration of fermentation sugars increased by 36.12%. Under these conditions, the hydrolysates were capable of generating 3,217 mL/L of biogas and 6.74 g/L of biosolvents, with increases of 28.17 and 7.29%, respectively, compared to controls. The combined application of the H11 enzymatic system and anaerobic fermentation has the potential to improve the comprehensive application of EP.

近年来,中国近海海域大规模爆发的浒苔(Enteromorpha prolifera)造成了严重威胁。本研究旨在利用利用肠胚多糖的微生物Vibrio sp. H11的水解酶体系提高肠胚多糖(EP)酶解糖的产量。菌株H11含有711个碳水化合物相关基因,其中259个基因属于可能水解EP的糖苷水解酶。为了使菌株H11水解EP的能力最大化,对培养基和组成进行了优化。响应面法分析表明,菌株H11在培养26 h后酶产率最高,为8.43 U/mL。粗H11酶处理50 g/L EP时,发酵糖浓度提高了36.12%。在此条件下,水解产物可产生3217 mL/L的沼气和6.74 g/L的生物溶剂,分别比对照增加28.17%和7.29%。H11酶体系与厌氧发酵的联合应用,有可能提高EP的综合利用水平。
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引用次数: 1
Characterization of Alanine Dehydrogenase and Its Effect on Streptomyces coelicolorA3(2) Development in Liquid Culture. 丙氨酸脱氢酶的特性及其对冷色链霉菌a3(2)液体培养发育的影响
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2019-01-01 Epub Date: 2019-12-18 DOI: 10.1159/000504709
Arie Van Wieren, Ryan Cook, Sudipta Majumdar

Streptomyces, the most important group of industrial microorganisms, is harvested in liquid cultures for the production of two-thirds of all clinically relevant secondary metabolites. It is demonstrated here that the growth of Streptomyces coelicolor A3(2) is impacted by the deletion of the alanine dehydrogenase (ALD), an essential enzyme that plays a central role in the carbon and nitrogen metabolism. A long lag-phase growth followed by a slow exponential growth of S. coelicolor due to ALD gene deletion was observed in liquid yeast extract mineral salt culture. The slow lag-phase growth was replaced by the normal wild-type like growth by ALD complementation engineering. The ALD enzyme from S. coelicolor was also heterologously cloned and expressed in Escherichia coli for characterization. The optimum enzyme activity for the oxidative deamination reaction was found at 30°C, pH 9.5 with a catalytic efficiency, kcat/KM, of 2.0 ± 0.1 mM-1 s-1. The optimum enzyme activity for the reductive amination reaction was found at 30°C, pH 9.0 with a catalytic efficiency, kcat/KM, of 1.9 ± 0.1 mM-1 s-1.

链霉菌是最重要的一组工业微生物,在液体培养中收获,用于生产三分之二的临床相关次级代谢物。研究表明,coelicolor链霉菌A3(2)的生长受到丙氨酸脱氢酶(ALD)缺失的影响,ALD是一种在碳氮代谢中起核心作用的必需酶。在液体酵母浸膏无机盐培养中,由于ALD基因缺失导致的长滞后期生长,随后呈缓慢的指数增长。通过ALD互补工程将缓慢的滞后期生长替换为正常的野生型样生长。并在大肠杆菌中进行了ALD酶的异种克隆和表达。在30°C、pH 9.5的条件下,氧化脱胺反应酶活性最佳,催化效率kcat/KM为2.0±0.1 mM-1 s-1。在30°C、pH 9.0条件下,酶活性最佳,催化效率kcat/KM为1.9±0.1 mM-1 s-1。
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引用次数: 3
Front & Back Matter 正面和背面事项
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-05-01 DOI: 10.1159/000489971
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引用次数: 0
Contents 内容
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-02-01 DOI: 10.1159/000487342
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引用次数: 0
Overexpression of an Inulinase Gene in an Oleaginous Yeast, Aureobasidium melanogenum P10, for Efficient Lipid Production from Inulin. 产油酵母黑素小孢子酵母P10中菊粉酶基因的过表达及其高效产脂作用。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-01-01 Epub Date: 2019-01-03 DOI: 10.1159/000493139
Yan-Feng Li, Hong Jiang, Zhong Hu, Guang-Lei Liu, Zhen-Ming Chi, Zhe Chi

In this study, in order to directly and efficiently convert inulin into a single-cell oil (SCO), an INU1 gene encoding inulinase from Kluyveromyces marxianus was integrated into the genomic DNA and actively expressed in an SCO producer Aureobasidium melanogenum P10. The transformant API41 obtained produced 28.5 U/mL of inulinase and its wild-type strain P10 yielded only 8.62 U/mL. Most (97.5%) of the inulinase produced by the transformant API41 was secreted into the culture. During a 10-L fermentation, 66.2% (w/w) lipid in the yeast cells of the transformant API41 and 14.38 g/L of cell dry weight were attained from inulin of 80.0 g/L within 120 h, high inulinase activity (23.7 U/mL) was also produced within 72 h, and the added inulin was actively hydrolyzed. This confirmed that the genetically engineered yeast of A. melanogenum P10 is suitable for direct production of lipids from inulin. The lipids produced could be used as feedstocks for biodiesel production.

为了直接高效地将菊粉转化为单细胞油(SCO),本研究将一种编码马氏克鲁维菌菊粉酶的INU1基因整合到SCO产生菌黑素小孢子虫P10的基因组DNA中,并在其上积极表达。获得的转化API41菊粉酶产量为28.5 U/mL,而其野生型菌株P10菊粉酶产量仅为8.62 U/mL。转化API41产生的菊粉酶大部分(97.5%)被分泌到培养物中。在10-L的发酵过程中,转化API41酵母细胞中80.0 g/L的菊粉在120 h内获得66.2% (w/w)的脂质,细胞干重达到14.38 g/L,在72 h内产生较高的菊粉酶活性(23.7 U/mL),添加的菊粉被有效水解。这证实了A. melanogenum P10基因工程酵母适合直接从菊粉中生产脂质。所得油脂可作为生物柴油生产的原料。
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引用次数: 4
Improvement of Spinosad Production upon Utilization of Oils and Manipulation of β-Oxidation in a High-Producing Saccharopolyspora spinosa Strain. 利用油脂提高棘糖多糖产量及调控高产棘糖多孢子菌β-氧化。
IF 1.2 Q2 Biochemistry, Genetics and Molecular Biology Pub Date : 2018-01-01 Epub Date: 2018-05-04 DOI: 10.1159/000487854
Ying Huang, Xiaolin Zhang, Chen Zhao, Xuhui Zhuang, Lin Zhu, Chao Guo, Yuan Song

Spinosad, a member of polyketide-derived macrolides produced in the actinomycete Saccharopolyspora spinosa, has been developed as a broad-spectrum and effective insecticide. The β-oxidation pathway could be an important source of building blocks for the biosynthesis of spinosad, thus the effect of vegetable oils on the production of spinosad in a high-yield strain was investigated. The spinosad production increased significantly with the addition of strawberry seed oil (511.64 mg/L) and camellia oil (520.07 mg/L) compared to the control group without oil (285.76 mg/L) and soybean oil group (398.11 mg/L). It also revealed that the addition of oils would affect the expression of genes involved in fatty acid metabolism, precursor supply, and oxidative stress. The genetically engineered strain, in which fadD1 and fadE genes of Streptomyces coelicolor were inserted, produced spinosad up to 784.72 mg/L in the medium containing camellia oil, while a higher spinosad production level (843.40 mg/L) was detected with the addition of 0.01 mM of thiourea.

Spinosad是一种广谱有效的杀虫剂,是由放线菌Saccharopolyspora spinosa产生的聚酮衍生大环内酯类化合物。β-氧化途径可能是spinosad生物合成的重要组成部分,因此研究了植物油对高产菌株spinosad生产的影响。添加草莓籽油(511.64 mg/L)和茶油(520.07 mg/L)显著高于不添加油的对照组(285.76 mg/L)和大豆油组(398.11 mg/L)。研究还发现,添加油脂会影响脂肪酸代谢、前体供应和氧化应激相关基因的表达。在含有油茶油的培养基中,插入彩色链霉菌fadD1和fadE基因的基因工程菌株的产糖量最高可达784.72 mg/L,添加0.01 mM硫脲的产糖量最高可达843.40 mg/L。
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引用次数: 5
期刊
Journal of Molecular Microbiology and Biotechnology
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