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The roles of blur and eye convergence in distance estimation in larval zebrafish. 斑马鱼幼体模糊和眼球收敛在距离估计中的作用。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 DOI: 10.1080/01677063.2024.2432033
Biswadeep Khan, Julie Lee Semmelhack

Animals use an array of visual cues to gauge distance, and their underlying neural mechanisms remain largely unknown. Zebrafish larvae execute different hunting behaviors depending on distance to the prey, providing a simple model system in which to study this process. To identify distance cues, we presented equivalent prey stimuli at increasing distance and recorded hunting behaviors. We found that the initial convergence angle was lower for more distant prey, suggesting that they are able to gauge distance to the prey via monocular cues. We investigated blur as a possible monocular cue, and found that by artificially blurring the stimulus, we were able to reduce initial convergence and strike probability. This implicates blur as a distance cue in zebrafish prey capture, adds to our knowledge of how larvae are able to visually target and accurately capture prey.

动物使用一系列视觉线索来判断距离,它们潜在的神经机制在很大程度上仍然未知。斑马鱼幼虫根据与猎物的距离执行不同的狩猎行为,为研究这一过程提供了一个简单的模型系统。为了确定距离线索,我们在增加距离时对猎物进行等效刺激,并记录猎物的狩猎行为。我们发现,对于距离较远的猎物,它们的初始收敛角较低,这表明它们能够通过单眼线索来判断与猎物的距离。我们研究了模糊作为一种可能的单目线索,并发现通过人为模糊刺激,我们能够减少初始收敛和打击概率。这意味着模糊作为斑马鱼捕获猎物的距离线索,增加了我们对幼虫如何能够在视觉上瞄准并准确捕获猎物的了解。
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引用次数: 0
Clinical application of whole-exome sequencing analysis in childhood epilepsy. 全外显子组测序分析在儿童癫痫中的临床应用。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-12-09 DOI: 10.1080/01677063.2024.2434869
Meral Gavaz, Elif S Aslan, Selahattin Tekeş

The swift updates of public databases and advancements in next-generation sequencing (NGS) technologies have enhanced the genetic identification capacities of epilepsy clinics. This study aimed to evaluate the diagnostic efficacy of NGS in pediatric epilepsy patients as a whole and to present the data obtained in the whole exome sequence analysis. We enrolled 40 children with suspected childhood epilepsy in this study. All patients underwent evaluation by a clinical geneticist or pediatric neurologist and the molecular genetic analysis of those children was performed by whole-exome sequencing (WES). Out of the 40 patients, 12 (30%) received a genetic diagnosis, involving 14 mutations across 13 genes. The cumulative positive diagnostic yield was 30%. Twelve of these patients were identified to have 5 variants previously documented as pathogenic, 9 variants classified as likely pathogenic, and 5 novel variants that have not been reported before. The outcomes indicate that whole-exome sequencing offers great benefits in clinical patient diagnosis, particularly in terms of detecting diagnostic variants. This study underscored the significance of whole exome sequencing (WES) studies, where only a broad gene set is examined in epilepsy patients. This approach has the potential to establish gene-specific phenotypic profiles, particularly by uncovering novel candidate genes in epilepsy patients with well-defined phenotypes. Additionally, conducting validation studies on variants of uncertain clinical significance could enhance the outcome yield.

公共数据库的快速更新和新一代测序(NGS)技术的进步提高了癫痫诊所的基因鉴定能力。本研究旨在从整体上评价NGS对小儿癫痫患者的诊断效果,并介绍全外显子组序列分析所得数据。我们在这项研究中招募了40名疑似儿童癫痫的儿童。所有患者均由临床遗传学家或儿科神经科医生进行评估,并通过全外显子组测序(WES)对这些儿童进行分子遗传学分析。在40名患者中,12名(30%)接受了基因诊断,涉及13个基因的14个突变。累计阳性诊断率为30%。这些患者中有12例被确定具有5种先前记录为致病性的变异,9种被归类为可能致病性的变异,以及5种以前未报告的新变异。结果表明,全外显子组测序在临床患者诊断中提供了巨大的好处,特别是在检测诊断变异方面。这项研究强调了全外显子组测序(WES)研究的重要性,其中仅检查癫痫患者的广泛基因集。这种方法具有建立基因特异性表型谱的潜力,特别是通过在具有明确表型的癫痫患者中发现新的候选基因。此外,对临床意义不确定的变异进行验证研究可以提高转归率。
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引用次数: 0
A memorial piece of my experience with Bill Pak. 我与比尔-帕克的一段纪念经历。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-08-20 DOI: 10.1080/01677063.2024.2391887
Mamiko Ozaki
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引用次数: 0
In honor of Bill Pak: my journey to the discovery of a rhodopsin gene. 为了纪念比尔·帕克:我发现视紫红质基因的旅程。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-12-26 DOI: 10.1080/01677063.2024.2443599
Joseph E O'Tousa
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引用次数: 0
Special section in honor of William L. Pak, a neurogenetics pioneer. 特别纪念威廉·l·帕克,神经遗传学先驱。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-12-26 DOI: 10.1080/01677063.2024.2443189
Barry Ganetzky
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引用次数: 0
Tribute to Dr. William L. Pak. 向白威廉博士致敬。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-06-19 DOI: 10.1080/01677063.2024.2366468
Hiroyuki Matsumoto
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引用次数: 0
Enthusiasm meets opportunity: in memoriam of William L. Pak, 1932-2023. 热情邂逅机遇:纪念威廉·l·帕克,1932-2023。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-12-02 DOI: 10.1080/01677063.2024.2419107
Randall Shortridge
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引用次数: 0
My recollections of the good old days in the Pak lab. 我回忆起在帕克实验室的美好时光。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-12-01 Epub Date: 2024-12-30 DOI: 10.1080/01677063.2024.2445902
Chun-Fang Wu
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引用次数: 0
Targeted deletion of olfactory receptors in D. melanogaster via CRISPR/Cas9-mediated LexA knock-in. 通过 CRISPR/Cas9 介导的 LexA 基因敲入,靶向删除黑腹蝇中的嗅觉受体。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-01 Epub Date: 2024-11-11 DOI: 10.1080/01677063.2024.2426014
Runqi Zhang, Renny Ng, Shiuan-Tze Wu, Chih-Ying Su

The study of olfaction in Drosophila melanogaster has greatly benefited from genetic reagents such as olfactory receptor mutant lines and GAL4 reporter lines. The CRISPR/Cas9 gene-editing system has been increasingly used to create null receptor mutants or replace coding regions with GAL4 reporters. To further expand this toolkit for manipulating fly olfactory receptor neurons (ORNs), we generated null alleles for 11 different olfactory receptors by using CRISPR/Cas9 to knock in LexA drivers, including multiple lines for receptors which have thus far lacked knock-in mutants. The targeted neuronal types represent a broad range of antennal ORNs from all four morphological sensillum classes. Additionally, we confirmed their loss-of-function phenotypes, assessed receptor haploinsufficiency, and evaluated the specificity of the LexA knock-in drivers. These receptor mutant lines have been deposited at the Bloomington Drosophila Stock Center for use by the broader scientific community.

对黑腹果蝇嗅觉的研究极大地受益于嗅觉受体突变体系和 GAL4 报告基因系等遗传试剂。CRISPR/Cas9 基因编辑系统被越来越多地用于创建无效受体突变体或用 GAL4 报告基因替换编码区。为了进一步扩展这一操纵蝇类嗅觉受体神经元(ORNs)的工具包,我们利用 CRISPR/Cas9 基因敲入 LexA 驱动因子,产生了 11 种不同嗅觉受体的空等位基因,其中包括迄今为止还没有敲入突变体的多种受体系。这些目标神经元类型代表了来自所有四种形态感觉器类别的多种触角 ORN。此外,我们还证实了它们的功能缺失表型,评估了受体的单倍体效率,并评估了 LexA 基因敲入驱动的特异性。这些受体突变品系已存放在布卢明顿果蝇种群中心,供更广泛的科学界使用。
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引用次数: 0
Neurobiology of egg-laying behavior in Drosophila: neural control of the female reproductive system. 果蝇产卵行为的神经生物学:雌性生殖系统的神经控制。
IF 1.8 4区 医学 Q3 GENETICS & HEREDITY Pub Date : 2024-09-01 Epub Date: 2024-09-09 DOI: 10.1080/01677063.2024.2396352
Mehrnaz Afkhami

Egg-laying is one of the key aspects of female reproductive behavior in insects. Egg-laying has been studied since the dawn of Drosophila melanogaster as a model organism. The female's internal state, hormones, and external factors, such as nutrition, light, and social environment, affect egg-laying output. However, only recently, neurobiological features of egg-laying behavior have been studied in detail. fruitless and doublesex, two key players in the sex determination pathway, have become focal points in identifying neurons of reproductive significance in both central and peripheral nervous systems. The reproductive tract and external terminalia house sensory neurons that carry the sensory information of egg maturation, mating and egg-laying. These sensory signals include the presence of male accessory gland products and mechanical stimuli. The abdominal neuromere houses neurons that receive information from the reproductive tract, including sex peptide abdominal ganglion neurons (SAGs), and send their information to the brain. In the brain, neuronal groups like aDNs and pC1 clusters modulate egg-laying decision-making, and other neurons like oviINs and oviDNs are necessary for egg-laying itself. Lastly, motor neurons involved in egg-laying, which are mostly octopaminergic, reside in the abdominal neuromere and orchestrate the muscle movements required for laying the egg. Egg-laying neuronal control is important in various evolutionary processes like cryptic female choice, and using different Drosophila species can provide intriguing avenues for the future of the field.

产卵是昆虫雌性生殖行为的关键环节之一。自黑腹果蝇成为模式生物以来,人们一直在研究产卵行为。雌性的内部状态、激素以及营养、光照和社会环境等外部因素都会影响产卵量。Fruitless和doublesex是性别决定途径中的两个关键角色,它们已成为鉴定中枢和外周神经系统中具有生殖意义的神经元的焦点。生殖道和外末梢神经中的感觉神经元传递着卵成熟、交配和产卵的感觉信息。这些感觉信号包括雄性附属腺产品的存在和机械刺激。腹部神经丘中的神经元接收来自生殖道的信息,包括性肽腹神经节神经元(SAGs),并将信息发送到大脑。在大脑中,aDNs 和 pC1 簇等神经元群调节产卵决策,而 oviINs 和 oviDNs 等其他神经元则是产卵本身所必需的。最后,参与产卵的运动神经元主要是章胺能神经元,它们位于腹部神经节,协调产卵所需的肌肉运动。产卵神经元控制在隐性雌性选择等各种进化过程中都很重要,利用不同果蝇物种可以为该领域的未来发展提供有趣的途径。
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引用次数: 0
期刊
Journal of neurogenetics
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