Varun Sasidharan Nair, Zheng Yu, Hosein Ahmadi, Agnes Bonifacius, Beate Pietzsch, Dirk H. Busch, Luka Cicin-Sain, Fabian Müller, Kilian Schober, Britta Eiz-Vesper, Stefan Floess, Jochen Huehn
Zinc finger E-box binding protein 2 (ZEB2) is a key factor in the differentiation of naïve CD8+ T cells into effector and memory T cells. However, the precise regulatory role of ZEB2 in cytotoxic CD8+ T cells remains unknown. Our recent DNA methylation analysis of cytomegalovirus (CMV)-specific human CD8+ T cells revealed two differentially methylated regions (DMRs) within the ZEB2 locus. In the present study, we show that these ZEB2 DMRs undergo pronounced demethylation during T cell differentiation. In particular, terminally differentiated CD8+ T cells and cytotoxic CD4+ T cells show an almost complete demethylation. Demethylation of the ZEB2 DMRs correlates strongly with ZEB2 expression in all T cell subsets. Furthermore, DNA methylation patterns remain stable during long-term in vitro culture. ZEB2 knockout in CD8+ effector T cells results in altered gene expression profiles, affecting genes related to cell–cell adhesion and impairing the cytotoxic capacity in CMV-specific killing assays. Our data show that ZEB2 expression contributes to the differentiation of naïve CD8+ T cells into effector and memory T cells and regulates the functional properties of virus-specific cytotoxic CD8+ T cells.
{"title":"Epigenetically Controlled ZEB2 Expression Promotes the Cytotoxic Potential of CMV-Specific CD8+ T Cells","authors":"Varun Sasidharan Nair, Zheng Yu, Hosein Ahmadi, Agnes Bonifacius, Beate Pietzsch, Dirk H. Busch, Luka Cicin-Sain, Fabian Müller, Kilian Schober, Britta Eiz-Vesper, Stefan Floess, Jochen Huehn","doi":"10.1002/eji.70084","DOIUrl":"https://doi.org/10.1002/eji.70084","url":null,"abstract":"<p>Zinc finger E-box binding protein 2 (ZEB2) is a key factor in the differentiation of naïve CD8<sup>+</sup> T cells into effector and memory T cells. However, the precise regulatory role of ZEB2 in cytotoxic CD8<sup>+</sup> T cells remains unknown. Our recent DNA methylation analysis of cytomegalovirus (CMV)-specific human CD8<sup>+</sup> T cells revealed two differentially methylated regions (DMRs) within the <i>ZEB2</i> locus. In the present study, we show that these <i>ZEB2</i> DMRs undergo pronounced demethylation during T cell differentiation. In particular, terminally differentiated CD8<sup>+</sup> T cells and cytotoxic CD4<sup>+</sup> T cells show an almost complete demethylation. Demethylation of the <i>ZEB2</i> DMRs correlates strongly with <i>ZEB2</i> expression in all T cell subsets. Furthermore, DNA methylation patterns remain stable during long-term in vitro culture. <i>ZEB2</i> knockout in CD8<sup>+</sup> effector T cells results in altered gene expression profiles, affecting genes related to cell–cell adhesion and impairing the cytotoxic capacity in CMV-specific killing assays. Our data show that <i>ZEB2</i> expression contributes to the differentiation of naïve CD8<sup>+</sup> T cells into effector and memory T cells and regulates the functional properties of virus-specific cytotoxic CD8<sup>+</sup> T cells.</p>","PeriodicalId":165,"journal":{"name":"European Journal of Immunology","volume":"55 11","pages":""},"PeriodicalIF":3.7,"publicationDate":"2025-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/eji.70084","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145449986","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
“Chen Q, Zheng J, Wang D, Liu Q, Kang L, Gao X, Lin Z. Nitrosonisoldipine is a selective inhibitor of inflammatory caspases and protects against pyroptosis and related septic shock. Eur J Immunol. 2021; 51(5):1234-1245.”
In Figure 4B of this article, the upper photo of “+10 µM nigericin” is wrongly labeled; it should be “+ 5 mM ATP”, which is consistent with the figure legends and description in the main text. We also found that an image of “−” negative control group and an image of “+ 5 mM ATP” positive control group were incorrectly used. In addition, we moved the upper group of images to the lower panel in the corrected figure to match the statistical results. It does not affect our results. The correct figure and figure legend are as follows:
We apologize for this error.
陈强,郑杰,王东,刘强,康磊,高翔,林忠。亚硝基索异地平是炎性半胱天冬酶的选择性抑制剂,对焦亡及相关脓毒性休克具有保护作用。欧洲免疫学杂志。2021;51(5): 1234 - 1245。”在本文的图4B中,上面的照片“+10µM nigicin”标注错误;应该是“+ 5mm ATP”,与正文中的图例和描述一致。我们还发现“−”阴性对照组和“+ 5 mM ATP”阳性对照组的图像被错误地使用。此外,我们将校正图中的上一组图像移至下一面板,以匹配统计结果。这并不影响我们的结果。正确的数字和数字图例如下:我们为这个错误道歉。
{"title":"Correction to “Nitrosonisoldipine is a selective inhibitor of inflammatory caspases and protects against pyroptosis and related septic shock”","authors":"","doi":"10.1002/eji.70082","DOIUrl":"https://doi.org/10.1002/eji.70082","url":null,"abstract":"<p>“Chen Q, Zheng J, Wang D, Liu Q, Kang L, Gao X, Lin Z. Nitrosonisoldipine is a selective inhibitor of inflammatory caspases and protects against pyroptosis and related septic shock. <i>Eur J Immunol</i>. 2021; 51(5):1234-1245.”</p><p>In Figure 4B of this article, the upper photo of “+10 µM nigericin” is wrongly labeled; it should be “+ 5 mM ATP”, which is consistent with the figure legends and description in the main text. We also found that an image of “−” negative control group and an image of “+ 5 mM ATP” positive control group were incorrectly used. In addition, we moved the upper group of images to the lower panel in the corrected figure to match the statistical results. It does not affect our results. The correct figure and figure legend are as follows:</p><p>We apologize for this error.</p>","PeriodicalId":165,"journal":{"name":"European Journal of Immunology","volume":"55 11","pages":""},"PeriodicalIF":3.7,"publicationDate":"2025-11-06","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/eji.70082","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"145449989","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Our cover features images related to flow cytometry techniques widely used for analysis of function and phenotypes of major human and murine immune cell subsets, superimposed on a multidimensional immune cell population scatter plot. These images are taken from the third edition of EJI's Flow Cytometry Guidelines by Cossarizza et al., a comprehensive resource prepared by flow cytometry and immunology research experts from around the world.