Pub Date : 2025-07-01Epub Date: 2025-05-06DOI: 10.1007/s10265-025-01642-8
Gabriel Tadeu Teodoro da Cruz, Gabriela Brito Costa, Nayara Magry Jesus Melo, Javier Guido Puntieri, João Paulo Souza
Different light intensities in cerrado stricto sensu (CSS) and semideciduous seasonal forests (SSF) can result in distinct morphological responses among woody species. This research evaluated the size and bud composition, budbreak time, and crown architecture of woody species in response to precipitation and varying light intensities in these two environments. The study was conducted in CSS (19°57'29″ S and 44°25'29″ W) and an SSF fragment (19°53'84″ S and 44°25'56″ W) in Minas Gerais, Brazil. The research focused on four species: Miconia albicans and Xylopia aromatica, which occur in both environments, as well as Bauhinia cfr. ungulata (CSS) and B. cfr. rufa (SSF). Shoots from the main axis were manually dissected, and budbreak times were recorded. Crown architecture was evaluated based on diagrams of the vegetative above-ground structure, excluding leaves. Light intensities was measured with a luxmeter at the crown's apex, interior, and base. Shoots were larger and had more preformed organs in CSS than in SSF trees. Trichomes were observed on shoots of all CSS and SSF trees. The number of cataphylls varied: B. cfr. ungulata had one, B. cfr. rufa had 1-3, while compound buds of X. aromatica averaged 5.4 in CSS and 3.7 in SSF. Simple buds of X. aromatica and all M. albicans buds lacked cataphylls. Budbreak occurred in September for M. albicans (CSS and SSF), October for B. cfr. ungulata, Juy-October for X. aromatica and August-October for B. cfr. rufa. A positive correlation between budbreak and rainfall was recorded only for B. cfr. ungulata. Despite differences in bud size and composition between environment, these didn't result in distinct crown architectures. The findings highlight that tropical woody species with cataphyll-protected buds are as common as in temperate regions. Further research is needed to explore phylogenetic traits and the ecological role of cataphylls in tropical species.
{"title":"Bud structure, time of budbreak and crown architecture in woody species from Cerrado and seasonal forests of Brazil.","authors":"Gabriel Tadeu Teodoro da Cruz, Gabriela Brito Costa, Nayara Magry Jesus Melo, Javier Guido Puntieri, João Paulo Souza","doi":"10.1007/s10265-025-01642-8","DOIUrl":"10.1007/s10265-025-01642-8","url":null,"abstract":"<p><p>Different light intensities in cerrado stricto sensu (CSS) and semideciduous seasonal forests (SSF) can result in distinct morphological responses among woody species. This research evaluated the size and bud composition, budbreak time, and crown architecture of woody species in response to precipitation and varying light intensities in these two environments. The study was conducted in CSS (19°57'29″ S and 44°25'29″ W) and an SSF fragment (19°53'84″ S and 44°25'56″ W) in Minas Gerais, Brazil. The research focused on four species: Miconia albicans and Xylopia aromatica, which occur in both environments, as well as Bauhinia cfr. ungulata (CSS) and B. cfr. rufa (SSF). Shoots from the main axis were manually dissected, and budbreak times were recorded. Crown architecture was evaluated based on diagrams of the vegetative above-ground structure, excluding leaves. Light intensities was measured with a luxmeter at the crown's apex, interior, and base. Shoots were larger and had more preformed organs in CSS than in SSF trees. Trichomes were observed on shoots of all CSS and SSF trees. The number of cataphylls varied: B. cfr. ungulata had one, B. cfr. rufa had 1-3, while compound buds of X. aromatica averaged 5.4 in CSS and 3.7 in SSF. Simple buds of X. aromatica and all M. albicans buds lacked cataphylls. Budbreak occurred in September for M. albicans (CSS and SSF), October for B. cfr. ungulata, Juy-October for X. aromatica and August-October for B. cfr. rufa. A positive correlation between budbreak and rainfall was recorded only for B. cfr. ungulata. Despite differences in bud size and composition between environment, these didn't result in distinct crown architectures. The findings highlight that tropical woody species with cataphyll-protected buds are as common as in temperate regions. Further research is needed to explore phylogenetic traits and the ecological role of cataphylls in tropical species.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"587-601"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144020971","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
The transition of plants in the green lineage from aquatic to terrestrial environments during the bryophyte stage marked a pivotal point in evolution. Successful terrestrialization required evolutionary adaptations to harsh and fluctuating light conditions, where direct irradiation is stronger than in aquatic environments. To cope with these challenges, plants evolved regulatory mechanisms to control cellular activities. One such acclimation is rapidly reversible, energy-dependent non-photochemical quenching (NPQ), which dissipates excess light energy as heat to protect the photosynthetic apparatus. Another critical innovation is abscisic acid (ABA) signaling, believed to have first emerged in bryophytes. Here, we reveal a potential link between these two key acclimations in bryophytes. We demonstrate that exogenous ABA induces NPQ in the moss Physcomitrium patens, increasing the levels of LHCSR, a key NPQ regulator, while concurrently decreasing PsbS. Exogenous ABA also enhances the xanthophyll cycle pigments, contributing to NPQ. In mutants deficient in ABA signaling components, including SNF1-related kinase 2 (SnRK2) and the transcription factor, Abscisic Acid-Insensitive 3 (ABI3), ABA-induced NPQ, LHCSR and PsbS expression, and xanthophyll cycle pigment accumulation were significantly reduced. These findings suggest that exogenous ABA enhances NPQ through the SnRK2 and ABI3-mediated signaling pathway by promoting LHCSR expression and xanthophyll cycle pigment production. We propose that the integration of ABA signaling and NPQ represent a critical evolutionary milestone, enabling early land plants to adapt and thrive in terrestrial environments.
{"title":"Abscisic acid enhances non-photochemical quenching through SnRK2 and ABI3 in Physcomitrium patens.","authors":"Chang-Hyun Maeng, Takuya Fujita, Junko Kishimoto, Ryouichi Tanaka, Atsushi Takabayashi, Tomomichi Fujita","doi":"10.1007/s10265-025-01627-7","DOIUrl":"10.1007/s10265-025-01627-7","url":null,"abstract":"<p><p>The transition of plants in the green lineage from aquatic to terrestrial environments during the bryophyte stage marked a pivotal point in evolution. Successful terrestrialization required evolutionary adaptations to harsh and fluctuating light conditions, where direct irradiation is stronger than in aquatic environments. To cope with these challenges, plants evolved regulatory mechanisms to control cellular activities. One such acclimation is rapidly reversible, energy-dependent non-photochemical quenching (NPQ), which dissipates excess light energy as heat to protect the photosynthetic apparatus. Another critical innovation is abscisic acid (ABA) signaling, believed to have first emerged in bryophytes. Here, we reveal a potential link between these two key acclimations in bryophytes. We demonstrate that exogenous ABA induces NPQ in the moss Physcomitrium patens, increasing the levels of LHCSR, a key NPQ regulator, while concurrently decreasing PsbS. Exogenous ABA also enhances the xanthophyll cycle pigments, contributing to NPQ. In mutants deficient in ABA signaling components, including SNF1-related kinase 2 (SnRK2) and the transcription factor, Abscisic Acid-Insensitive 3 (ABI3), ABA-induced NPQ, LHCSR and PsbS expression, and xanthophyll cycle pigment accumulation were significantly reduced. These findings suggest that exogenous ABA enhances NPQ through the SnRK2 and ABI3-mediated signaling pathway by promoting LHCSR expression and xanthophyll cycle pigment production. We propose that the integration of ABA signaling and NPQ represent a critical evolutionary milestone, enabling early land plants to adapt and thrive in terrestrial environments.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"625-636"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143795742","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01Epub Date: 2025-04-28DOI: 10.1007/s10265-025-01636-6
Steven R Manchester
Although Tetracentron (Trochodendraceae) is endemic to eastern Asia today, the fossil record indicates that it was formerly more widespread across the northern hemisphere. Infructescences from the Paleocene of Wyoming, USA, documented herein, represent the oldest known occurrence of the genus. Details of the morphology, including spikes of sessile, tetracarpellate, apically dehiscent capsules with styles emerging from the lower part of the fruit, and a nectary bulge beneath each style, are revealed by micro-CT scanning of specimens preserved as molds and casts in siltstone. The discovery of Tetracentron linchensis sp. nov. indicates that Tetracentron and Trochodendron had already diverged by about 60 million years ago and were sympatric, along with the extinct relative, Eotrochion, in the Paleocene of Wyoming. North American fossil occurrences of Trochodendraceae, including extinct Eocene and Miocene genera, as well as both extant genera, highlight a former diversity and geographic spread that is no longer evident in the surviving Asian Trochodendraceae.
{"title":"Tetracentron (Trochodendraceae) in the Paleocene and Miocene of western North America.","authors":"Steven R Manchester","doi":"10.1007/s10265-025-01636-6","DOIUrl":"10.1007/s10265-025-01636-6","url":null,"abstract":"<p><p>Although Tetracentron (Trochodendraceae) is endemic to eastern Asia today, the fossil record indicates that it was formerly more widespread across the northern hemisphere. Infructescences from the Paleocene of Wyoming, USA, documented herein, represent the oldest known occurrence of the genus. Details of the morphology, including spikes of sessile, tetracarpellate, apically dehiscent capsules with styles emerging from the lower part of the fruit, and a nectary bulge beneath each style, are revealed by micro-CT scanning of specimens preserved as molds and casts in siltstone. The discovery of Tetracentron linchensis sp. nov. indicates that Tetracentron and Trochodendron had already diverged by about 60 million years ago and were sympatric, along with the extinct relative, Eotrochion, in the Paleocene of Wyoming. North American fossil occurrences of Trochodendraceae, including extinct Eocene and Miocene genera, as well as both extant genera, highlight a former diversity and geographic spread that is no longer evident in the surviving Asian Trochodendraceae.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"555-561"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144013110","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01Epub Date: 2025-04-07DOI: 10.1007/s10265-025-01630-y
Toshiki Wada, Ayako N Sakamoto, Masaaki Umeda, Naoki Takahashi
Living organisms are constantly at the risk of DNA damage caused by factors such as DNA replication errors, reactive oxygen species, and UV radiation. In plants, DNA damage activates the NAC-type transcription factor SUPPRESSOR OF GAMMA RESPONSE 1 (SOG1) that governs DNA damage responses such as cell cycle arrest, stem cell death, and early onset of endoreplication. However, molecular mechanisms underlying the early induction of endoreplication onset in response to DNA damage remain elusive. In this study, we show that CELL CYCLE SWITCH 52 A1 (CCS52A1), an activator of the APC/C E3 ligase, plays a major role in the early onset of endoreplication in response to DNA double-strand breaks (DSBs) in Arabidopsis roots. Upon DSBs, SOG1 directly binds to the CCS52A1 locus, thereby inducing its expression. Moreover, early transition to endoreplication in response to DSBs is suppressed in ccs52a1 knockout roots. Our data propose that increased polyploidy may function as a unique adaptative mechanism to genotoxic stress in plants.
{"title":"SUPPRESOR OF GAMMA RESPONSE 1 promotes early onset of endoreplication upon DNA double-strand breaks by inducing CCS52A1 expression in Arabidopsis roots.","authors":"Toshiki Wada, Ayako N Sakamoto, Masaaki Umeda, Naoki Takahashi","doi":"10.1007/s10265-025-01630-y","DOIUrl":"10.1007/s10265-025-01630-y","url":null,"abstract":"<p><p>Living organisms are constantly at the risk of DNA damage caused by factors such as DNA replication errors, reactive oxygen species, and UV radiation. In plants, DNA damage activates the NAC-type transcription factor SUPPRESSOR OF GAMMA RESPONSE 1 (SOG1) that governs DNA damage responses such as cell cycle arrest, stem cell death, and early onset of endoreplication. However, molecular mechanisms underlying the early induction of endoreplication onset in response to DNA damage remain elusive. In this study, we show that CELL CYCLE SWITCH 52 A1 (CCS52A1), an activator of the APC/C E3 ligase, plays a major role in the early onset of endoreplication in response to DNA double-strand breaks (DSBs) in Arabidopsis roots. Upon DSBs, SOG1 directly binds to the CCS52A1 locus, thereby inducing its expression. Moreover, early transition to endoreplication in response to DSBs is suppressed in ccs52a1 knockout roots. Our data propose that increased polyploidy may function as a unique adaptative mechanism to genotoxic stress in plants.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"679-693"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12238086/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143795755","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1007/s10265-025-01647-3
Toshiki Wada, Ayako N Sakamoto, Masaaki Umeda, Naoki Takahashi
{"title":"Correction: SUPPRESOR OF GAMMA RESPONSE 1 promotes early onset of endoreplication upon DNA double-strand breaks by inducing CCS52A1 expression in Arabidopsis roots.","authors":"Toshiki Wada, Ayako N Sakamoto, Masaaki Umeda, Naoki Takahashi","doi":"10.1007/s10265-025-01647-3","DOIUrl":"10.1007/s10265-025-01647-3","url":null,"abstract":"","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"695"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12238194/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144216163","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01Epub Date: 2025-04-28DOI: 10.1007/s10265-025-01640-w
Pradeep K Agarwal, Parinita Agarwal, Anjali Chittora, Adarsh Bhawsar, Treesa Thomas
Aeluropus lagopoides is salt secreting halophytic perennial grass that commonly grows in coastal regions. Under excessive saline conditions, A. lagopoides is able to thrive and completes its life cycle. It has developed various adaptive mechanisms to tolerate harsh environmental conditions. Aeluropus follow the novel mechanism of salt secretion by excreting Na+ from the leaf sheath and stem of the plant in the form of salt crystals. Various salt responsive genes and transcription factors have been studied under salinity stress in A. lagopoides. Economically important phytochemicals are also present in this plant, thus, making it industrially important. Utilization of salt stress responsive genes and transcription factors in developing salt tolerant transgenics crops can also provide significant benefits, and potentially boost the agricultural industry for sustainable growth and production.
{"title":"Aeluropus lagopoides: an important halophyte with key physiological and molecular mechanisms for salinity tolerance and a unique genetic resource for developing climate resilient crops.","authors":"Pradeep K Agarwal, Parinita Agarwal, Anjali Chittora, Adarsh Bhawsar, Treesa Thomas","doi":"10.1007/s10265-025-01640-w","DOIUrl":"10.1007/s10265-025-01640-w","url":null,"abstract":"<p><p>Aeluropus lagopoides is salt secreting halophytic perennial grass that commonly grows in coastal regions. Under excessive saline conditions, A. lagopoides is able to thrive and completes its life cycle. It has developed various adaptive mechanisms to tolerate harsh environmental conditions. Aeluropus follow the novel mechanism of salt secretion by excreting Na<sup>+</sup> from the leaf sheath and stem of the plant in the form of salt crystals. Various salt responsive genes and transcription factors have been studied under salinity stress in A. lagopoides. Economically important phytochemicals are also present in this plant, thus, making it industrially important. Utilization of salt stress responsive genes and transcription factors in developing salt tolerant transgenics crops can also provide significant benefits, and potentially boost the agricultural industry for sustainable growth and production.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"535-554"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144008319","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Homeostasis of inorganic phosphate (Pi) in the chloroplasts is essential for healthy CO2 assimilation. When Pi in chloroplasts is insufficient, the increase in the CO2 assimilation rate (A) with an increase in CO2 level is restricted, whereas A per unit total protein level moderately decreases under low-to-normal CO2 levels. Some phosphate transporters (PHT) are localized in the chloroplast envelope; however, their contribution to the maintenance of Pi homeostasis for CO2 assimilation has rarely been reported. In this study, we generated transgenic rice plants with RNAi-suppressed PHT4;4, one of the two genes of chloroplast envelope-localized PHT, and examined the changes in the characteristics of CO2 assimilation. In three transgenic lines, the mRNA levels of PHT4;4 decreased by approximately 80% without a notable decrease in total leaf-P levels or total leaf-N levels, which is thought to approximately correspond to total protein levels. A in the transgenic plants tended to be slightly lower than that in the wild-type plants, irrespective of the CO2 level, and typically increased to saturation with increasing CO2 levels. A per unit total leaf-N level in transgenic plants tended to be slightly lower than that in wild-type plants. These results indicate that substantial PHT4;4 suppression caused slight symptoms of Pi-limited CO2 assimilation. Therefore, PHT4;4 is suggested to be involved in the maintenance of chloroplast Pi homeostasis for healthy CO2 assimilation, although its contribution is minor.
{"title":"Effects of suppression of phosphate transporter 4;4 on CO<sub>2</sub> assimilation in rice.","authors":"Ryosei Harada, Takaya Sugimoto, Yuki Takegahara-Tamakawa, Amane Makino, Yuji Suzuki","doi":"10.1007/s10265-025-01638-4","DOIUrl":"10.1007/s10265-025-01638-4","url":null,"abstract":"<p><p>Homeostasis of inorganic phosphate (P<sub>i</sub>) in the chloroplasts is essential for healthy CO<sub>2</sub> assimilation. When P<sub>i</sub> in chloroplasts is insufficient, the increase in the CO<sub>2</sub> assimilation rate (A) with an increase in CO<sub>2</sub> level is restricted, whereas A per unit total protein level moderately decreases under low-to-normal CO<sub>2</sub> levels. Some phosphate transporters (PHT) are localized in the chloroplast envelope; however, their contribution to the maintenance of P<sub>i</sub> homeostasis for CO<sub>2</sub> assimilation has rarely been reported. In this study, we generated transgenic rice plants with RNAi-suppressed PHT4;4, one of the two genes of chloroplast envelope-localized PHT, and examined the changes in the characteristics of CO<sub>2</sub> assimilation. In three transgenic lines, the mRNA levels of PHT4;4 decreased by approximately 80% without a notable decrease in total leaf-P levels or total leaf-N levels, which is thought to approximately correspond to total protein levels. A in the transgenic plants tended to be slightly lower than that in the wild-type plants, irrespective of the CO<sub>2</sub> level, and typically increased to saturation with increasing CO<sub>2</sub> levels. A per unit total leaf-N level in transgenic plants tended to be slightly lower than that in wild-type plants. These results indicate that substantial PHT4;4 suppression caused slight symptoms of P<sub>i</sub>-limited CO<sub>2</sub> assimilation. Therefore, PHT4;4 is suggested to be involved in the maintenance of chloroplast P<sub>i</sub> homeostasis for healthy CO<sub>2</sub> assimilation, although its contribution is minor.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"667-677"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12238151/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144064069","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01Epub Date: 2025-04-29DOI: 10.1007/s10265-025-01643-7
Ryutaro Koda, Yoshinori Murai, Hajime Ikeda
Diversity of endemic species may result from two evolutionary processes: in-situ diversification (radiation) or phylogenetically independent divergences (non-radiation). To explore the evolutionary history of endemic-rich alpine flora in the Japanese Archipelago, we investigated the phylogenetic relationships of four endemic taxa of Draba (Brassicaceae) from the high mountains of central Honshu: D. kitadakensis, D. sachalinensis var. shinanomontana, D. sakuraii var. nipponica, and D. shiroumana. Using molecular phylogenetic analyses on plastid trnL-F and nuclear ITS sequence of 157 taxa, we found that the four taxa endemic to central Honshu did not form a monophyletic group and diverged from at least two evolutionary independent lineages. Moreover, ancestral area reconstruction further revealed that some of their ancestral species may have originated from different geographical regions. These findings indicate that the endemic Draba in central Honshu diverged through non-radiative evolutionary origin. Our study suggests that the richness of endemic species in the alpine zone of the Japanese Archipelago is associated with multiple sources with high species diversity located in nearby geographical regions.
特有物种的多样性可能源于两个进化过程:原位多样化(辐射)和系统发育独立的分化(非辐射)。为探讨日本列岛高山特有植物区系的进化历史,研究了本州中部高山地区4个特有植物类群D. kitadakensis、D. sachalinensis var. shinanomontana、D. sakuraii var. nipponica和D. shiroumana的系统发育关系。通过对157个分类群的trnL-F和ITS核序列的分子系统发育分析,我们发现本州中部特有的4个分类群并没有形成一个单系群,而是从至少两个进化独立的谱系分化而来。此外,祖先区域重建进一步揭示了它们的一些祖先物种可能起源于不同的地理区域。这些发现表明,本州中部地区特有的Draba是通过非辐射进化起源而分化的。研究结果表明,日本列岛高寒地区特有物种的丰富度与邻近地理区域的多种物种多样性来源有关。
{"title":"Non-radiative origin for alpine endemics of Draba (Brassicaceae) in the central mountains of the Japanese Archipelago.","authors":"Ryutaro Koda, Yoshinori Murai, Hajime Ikeda","doi":"10.1007/s10265-025-01643-7","DOIUrl":"10.1007/s10265-025-01643-7","url":null,"abstract":"<p><p>Diversity of endemic species may result from two evolutionary processes: in-situ diversification (radiation) or phylogenetically independent divergences (non-radiation). To explore the evolutionary history of endemic-rich alpine flora in the Japanese Archipelago, we investigated the phylogenetic relationships of four endemic taxa of Draba (Brassicaceae) from the high mountains of central Honshu: D. kitadakensis, D. sachalinensis var. shinanomontana, D. sakuraii var. nipponica, and D. shiroumana. Using molecular phylogenetic analyses on plastid trnL-F and nuclear ITS sequence of 157 taxa, we found that the four taxa endemic to central Honshu did not form a monophyletic group and diverged from at least two evolutionary independent lineages. Moreover, ancestral area reconstruction further revealed that some of their ancestral species may have originated from different geographical regions. These findings indicate that the endemic Draba in central Honshu diverged through non-radiative evolutionary origin. Our study suggests that the richness of endemic species in the alpine zone of the Japanese Archipelago is associated with multiple sources with high species diversity located in nearby geographical regions.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"563-573"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12238178/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144064100","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01DOI: 10.1007/s10265-025-01632-w
Mariko Asaoka, Eric Badel, Ali Ferjani, Kazuhiko Nishitani, Olivier Hamant
{"title":"Correction to: Contributions of lignification, tissue arrangement patterns, and cross-sectional area to whole-stem mechanical properties in Arabidopsis thaliana.","authors":"Mariko Asaoka, Eric Badel, Ali Ferjani, Kazuhiko Nishitani, Olivier Hamant","doi":"10.1007/s10265-025-01632-w","DOIUrl":"10.1007/s10265-025-01632-w","url":null,"abstract":"","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"697"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12238199/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"143795746","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2025-07-01Epub Date: 2025-04-15DOI: 10.1007/s10265-025-01637-5
Mio K Shibuta, Tsugumi Aso, Yutsuki Okawa
Pollen is required for fertilization and the associated production of seeds and fruits, which are important for human nutrition. Research on the tricellular pollen of Arabidopsis thaliana revealed that chromatin is highly condensed and transcriptional activity is suppressed in sperm cells. However, comprehensive structural investigations involving generative cells of bicellular pollen have not been conducted. In this study, we provide relevant insights into other angiosperms that produce bicellular pollen. Lilium longiflorum, which has large and easily observable nuclei, was used for a detailed analysis of the chromatin structure and transcriptionally active regions in pollen and pollen tubes. Chromatin was condensed, resulting in a ribbon-like structure that was clearly visible in mature generative cell nuclei. Additionally, transcriptionally active regions were restricted to the intersections of chromatin as pollen desiccated. Although de novo transcription was revealed to be unnecessary for pollen tube growth, transcriptional activity temporarily resumed before generative cell division during pollen tube growth. Moreover, the inhibition of de novo transcription influenced changes in nuclear morphology. In this study, the distinctive chromatin structures and transcriptional activity states in generative cell nuclei of bicellular pollen were elucidated, with the generated data contributing to a deeper understanding of transcription and other regulatory mechanisms involved in pollen maturation and pollen tube growth.
{"title":"Dynamic changes in chromatin structure and transcriptional activity in the generative cells of Lilium longiflorum.","authors":"Mio K Shibuta, Tsugumi Aso, Yutsuki Okawa","doi":"10.1007/s10265-025-01637-5","DOIUrl":"10.1007/s10265-025-01637-5","url":null,"abstract":"<p><p>Pollen is required for fertilization and the associated production of seeds and fruits, which are important for human nutrition. Research on the tricellular pollen of Arabidopsis thaliana revealed that chromatin is highly condensed and transcriptional activity is suppressed in sperm cells. However, comprehensive structural investigations involving generative cells of bicellular pollen have not been conducted. In this study, we provide relevant insights into other angiosperms that produce bicellular pollen. Lilium longiflorum, which has large and easily observable nuclei, was used for a detailed analysis of the chromatin structure and transcriptionally active regions in pollen and pollen tubes. Chromatin was condensed, resulting in a ribbon-like structure that was clearly visible in mature generative cell nuclei. Additionally, transcriptionally active regions were restricted to the intersections of chromatin as pollen desiccated. Although de novo transcription was revealed to be unnecessary for pollen tube growth, transcriptional activity temporarily resumed before generative cell division during pollen tube growth. Moreover, the inhibition of de novo transcription influenced changes in nuclear morphology. In this study, the distinctive chromatin structures and transcriptional activity states in generative cell nuclei of bicellular pollen were elucidated, with the generated data contributing to a deeper understanding of transcription and other regulatory mechanisms involved in pollen maturation and pollen tube growth.</p>","PeriodicalId":16813,"journal":{"name":"Journal of Plant Research","volume":" ","pages":"653-666"},"PeriodicalIF":2.7,"publicationDate":"2025-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"144031097","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}