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Methylglyoxal enhances the proliferation of vascular smooth muscle cells via Akt phosphorylation. 甲基乙二醛通过Akt磷酸化促进血管平滑肌细胞的增殖。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-01 DOI: 10.1080/10799893.2022.2098328
Mustafa Kırça

Methylglyoxal (MGO) is predominantly produced as a by-product of the glycolysis pathway. The glyoxalase system effectively removes it in a healthy organism. However, this process is impaired, and MGO level is elevated in people with diabetes. MGO's effects on proliferation were mostly studied in cancer cells, and the data in other cell types are limited. This study inspected the proliferative capacity of MGO in vascular smooth muscle cells (VSMCs), which have a crucial role in atherosclerosis and restenosis. The roles of ERK1/2 MAPK and Akt phosphorylations in proliferation were determined. Telmisartan, irbesartan, and NF-κB inhibitor JSH-23's roles in protecting the cells from MGO-induced proliferation were also investigated. Primary VSMCs were isolated from the rat aorta. The proliferation was spectrophotometrically measured by using a tetrazolium salt (Wst-1). The cells were cultured in standard media (SM, glucose conc. 5.5 mM) or high glucose media (HGM, glucose conc. 25 mM; an in vitro model of hyperglycemia). ERK1/2 MAPK and Akt phosphorylations were determined by the western blot method. MGO triggered the proliferation at 24, 48, and 72 hrs in SM and 48 and 72 hrs in HGM. Low doses of MGO such as 1-10 µM can induce proliferation. The phosphorylated ERK1/2 MAPK and Akt participated in MGO-induced proliferation. Telmisartan, irbesartan, and JSH-23 effectively alleviated the proliferation and Akt phosphorylation. MGO could proliferate VSMCs even at low doses. Moreover, hypertensive diabetic patients might benefit from a sartan family drug to protect VSMCs from MGO-induced proliferation.

甲基乙二醛(MGO)主要作为糖酵解途径的副产物产生。乙二醛酶系统在一个健康的生物体中有效地去除它。然而,这一过程受损,糖尿病患者的MGO水平升高。MGO对细胞增殖的影响主要是在癌细胞中研究,其他细胞类型的研究数据有限。本研究检测了MGO在血管平滑肌细胞(VSMCs)中的增殖能力,血管平滑肌细胞在动脉粥样硬化和再狭窄中起关键作用。确定ERK1/2 MAPK和Akt磷酸化在细胞增殖中的作用。我们还研究了替米沙坦、厄贝沙坦和NF-κB抑制剂JSH-23对mgo诱导的细胞增殖的保护作用。从大鼠主动脉分离原代VSMCs。用四氮唑盐(Wst-1)分光光度法测定细胞增殖。细胞在标准培养基中培养(SM,葡萄糖培养基)。5.5 mM)或高糖培养基(HGM,葡萄糖conc。25毫米;体外高血糖模型)。western blot法检测ERK1/2 MAPK和Akt磷酸化水平。MGO在SM和HGM分别于24、48、72小时和48、72小时触发细胞增殖。低剂量MGO(1-10µM)可诱导增殖。磷酸化的ERK1/2 MAPK和Akt参与了mgo诱导的增殖。替米沙坦、厄贝沙坦和JSH-23均能有效缓解细胞增殖和Akt磷酸化。即使在低剂量下,MGO也能使VSMCs增殖。此外,高血压糖尿病患者可能受益于沙坦家族药物,以保护VSMCs免受mgo诱导的增殖。
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引用次数: 0
Crosstalk between kisspeptin and gonadotropin-inhibitory hormone in the silence of puberty: preclinical evidence from a calcium signaling study. kisspeptin和促性腺激素抑制激素在青春期沉默中的串扰:来自钙信号研究的临床前证据。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-01 DOI: 10.1080/10799893.2022.2125014
Ferah Bulut, Emine Kacar, Batuhan Bilgin, Munevver Gizem Hekim, Muhammed Mirac Keleştemur, Zafer Sahin, Ahmet Ayar, Mete Ozcan

Kisspeptin and gonadotropin-inhibitory hormone (GnIH) are among suggested neuroendocrine modulators of reproductive function. Intracellular calcium signaling is a critical component in the regulation of a variety of physiological and pathological processes including neurotransmitter release, and, therefore, can be used as signaling indicator for investigating the involvement of kisspeptin, GnIH, and gonadotropin-releasing hormone (GnRH) release. Hence, this study investigated the effects of kisspeptin and GnIH on calcium signaling using immortalized hypothalamic cells (rHypoE-8) as a model. Kisspeptin neurons were loaded with the ratiometric calcium dye (Fura-2 AM, 1 μmol) and intracellular free calcium ([Ca2+]i) responses were quantified using digital fluorescence imaging system. Kisspeptin-10 (100, 300, and 1000 nM) caused a significant increase in [Ca2+]i in rHypoE-8 cells (n = 58, n = 64, and n = 49, respectively, p < 0.001). The kisspeptin receptor antagonist, P234, inhibited the calcium responses to kisspeptin (p < 0.001, n = 32). GnIH (100 and 1000 nM), alone, did not cause any significant change in the mean basal [Ca2+]i levels in kisspeptin cells, but GnIH attenuated the kisspeptin-evoked [Ca2+]i transients (n = 47, p < 0.001). This novel findings of [Ca2+]i signaling in in vitro setting implicate that kisspeptin and GnIH may exert their effects on hypothalamus-pituitary-gonadal (HPG) axis by modulating kisspeptin neurons. These results also implicate that kisspeptin neurons may have an autocrine regulation.

Kisspeptin和促性腺激素抑制激素(GnIH)被认为是生殖功能的神经内分泌调节剂。细胞内钙信号是调节包括神经递质释放在内的多种生理和病理过程的关键组成部分,因此可以作为研究kisspeptin、GnIH和促性腺激素释放激素(GnRH)释放参与的信号转导指标。因此,本研究以永生化下丘脑细胞(rHypoE-8)为模型,研究kisspeptin和GnIH对钙信号传导的影响。将Kisspeptin神经元加载比例钙染料(Fura-2 AM, 1 μmol),用数字荧光成像系统定量细胞内游离钙([Ca2+]i)的响应。Kisspeptin-10(100,300和1000 nM)引起rHypoE-8细胞[Ca2+]i显著升高(n = 58, n = 64和n = 49, p p n = 32)。单独GnIH (100 nM和1000 nM)未引起kisspeptin细胞平均基础[Ca2+]i水平的显著变化,但GnIH减弱了kisspeptin诱发的[Ca2+]i瞬变(n = 47, p 2+]i信号),提示kisspeptin和GnIH可能通过调节kisspeptin神经元对下丘脑-垂体-性腺(HPG)轴起作用。这些结果也暗示kisspeptin神经元可能具有自分泌调节作用。
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引用次数: 1
Pharmacological characterization of the α2A-adrenergic receptor inhibiting rat hippocampal CA3 epileptiform activity: comparison of ligand efficacy and potency. 抑制大鼠海马 CA3 癫痫样活动的 α2A-肾上腺素能受体的药理学特征:配体功效和效力的比较。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-01 Epub Date: 2022-08-19 DOI: 10.1080/10799893.2022.2110896
Joseph P Biggane, Ke Xu, Brianna L Goldenstein, Kylie L Davis, Elizabeth J Luger, Bethany A Davis, Chris W D Jurgens, Dianne M Perez, James E Porter, Van A Doze

The mechanism underlying the antiepileptic actions of norepinephrine (NE) is unclear with conflicting results. Our objectives are to conclusively delineate the specific adrenergic receptor (AR) involved in attenuating hippocampal CA3 epileptiform activity and assess compounds for lead drug development. We utilized the picrotoxin model of seizure generation in rat brain slices using electrophysiological recordings. Epinephrine (EPI) reduced epileptiform burst frequency in a concentration-dependent manner. To identify the specific receptor involved in this response, the equilibrium dissociation constants were determined for a panel of ligands and compared with established binding values for α1, α2, and other receptor subtypes. Correlation and slope of unity were found for the α2A-AR, but not other receptors. Effects of different chemical classes of α-AR agonists at inhibiting epileptiform activity by potency (pEC50) and relative efficacy (RE) were determined. Compared with NE (pEC50, 6.20; RE, 100%), dexmedetomidine, an imidazoline (pEC50, 8.59; RE, 67.1%), and guanabenz, a guanidine (pEC50, 7.94; RE, 37.9%), exhibited the highest potency (pEC50). In contrast, the catecholamines, EPI (pEC50, 6.95; RE, 120%) and α-methyl-NE (pEC50, 6.38; RE, 116%) were the most efficacious. These findings confirm that CA3 epileptiform activity is mediated solely by α2A-ARs without activation of other receptor systems. These findings suggest a pharmacotherapeutic target for treating epilepsy and highlight the need for selective and efficacious α2A-AR agonists that can cross the blood-brain barrier.

去甲肾上腺素(NE)抗癫痫作用的机制尚不清楚,结果也相互矛盾。我们的目标是最终确定参与减弱海马 CA3 癫痫样活动的特定肾上腺素能受体 (AR),并评估用于先导药物开发的化合物。我们利用电生理记录在大鼠脑片上建立了癫痫发作的微毒素模型。肾上腺素(EPI)以浓度依赖的方式降低了癫痫样爆发频率。为了确定参与这种反应的特定受体,测定了一组配体的平衡解离常数,并与α1、α2和其他受体亚型的既定结合值进行了比较。结果发现,α2A-AR 与其他受体的相关性和斜率相同。测定了不同化学类别的α-AR激动剂抑制癫痫样活动的效力(pEC50)和相对效力(RE)。与 NE(pEC50,6.20;RE,100%)相比,咪唑啉类右美托咪定(pEC50,8.59;RE,67.1%)和胍类胍(pEC50,7.94;RE,37.9%)表现出最高的效力(pEC50)。相比之下,儿茶酚胺、EPI(pEC50,6.95;RE,120%)和α-甲基-NE(pEC50,6.38;RE,116%)的效力最高。这些研究结果证实,CA3 癫痫样活动仅由α2A-ARs 介导,而没有激活其他受体系统。这些发现提出了治疗癫痫的药物治疗靶点,并强调了对可穿过血脑屏障的选择性和高效α2A-AR激动剂的需求。
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引用次数: 1
Can calcitonin gene-related peptide (CGRP) and pentraxin-3 (PTX-3) be useful in diagnosing acute migraine attack? 降钙素基因相关肽(CGRP)和戊素-3 (PTX-3)在诊断急性偏头痛发作中有用吗?
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-12-01 DOI: 10.1080/10799893.2022.2097264
Sevilay Vural, Levent Albayrak

Purpose: Even if migraine is not fatal, it is a common and challenging disease with adverse effects on individuals' lives. The lack of objective diagnostic tools causes delays in diagnosis and treatment initiation. The primary aim of this study is to reveal the diagnostic value of Calcitonin Gene-Related Peptide (CGRP) and Pentraxin-3 (PTX-3) in acute migraine. To this aim, we compared the serum CGRP and PTX-3 levels of migraine patients with acute attacks to those in healthy individuals.

Material and method: A total of 135 individuals (85 patients with migraine attacks with or without aura and 50 healthy controls) participated in the study. Serum CGRP and PTX-3 levels were measured with ELISA analysis. A p value less than 0.05 was considered significant.

Results: Serum CGRP [146.70 (21.52-413.67) vs. 65.90 (3.80-256.60) pg/mL] and PTX-3 levels [12.71 (0.62-33.97) vs. 1.01 (0.06-9.48) ng/mL] were higher in patients with migraine attack than the control group (p < 0.01 and p < 0.01, respectively). ROC analysis showed that the cutoff value for serum CGRP was 121.39 pg/mL (AUC: 0.751, Sen:%61, Spe:%64) whereas the cutoff value for PTX-3 was 4,06 ng/mL (AUC:0.876, Sen:%73, Spe:%76). Serum CGRP levels were positively correlated with pain intensity. Serum CGRP and PTX-3 levels did not differ across gender groups and presence of aura in subgroup analysis.

Conclusion: Patients with acute migraine attacks have higher serum CGRP and PTX-3 levels than controls. Both biomarkers show high potential for the diagnosis of a migraine attack.

目的:即使偏头痛不是致命的,它也是一种常见和具有挑战性的疾病,对个人的生活产生不利影响。缺乏客观的诊断工具导致诊断和治疗开始的延误。本研究的主要目的是揭示降钙素基因相关肽(CGRP)和戊traxin-3 (PTX-3)在急性偏头痛中的诊断价值。为此,我们比较了急性发作偏头痛患者与健康人群的血清CGRP和PTX-3水平。材料和方法:共有135人(85名有或没有先兆的偏头痛患者和50名健康对照者)参加了这项研究。ELISA法检测血清CGRP、PTX-3水平。p值小于0.05为显著性。结果:偏头痛发作组血清CGRP[146.70(21.52-413.67)比65.90 (3.80-256.60)pg/mL]和PTX-3水平[12.71(0.62-33.97)比1.01 (0.06-9.48)ng/mL]高于对照组(p < 0.05)。结论:急性偏头痛发作组血清CGRP和PTX-3水平高于对照组。这两种生物标志物都显示出诊断偏头痛发作的高潜力。
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引用次数: 2
Endothelial progenitor cells promote neural stem cell proliferation in hypoxic conditions through VEGF via the PI3K/AKT pathway. 内皮祖细胞通过PI3K/AKT通路通过VEGF促进缺氧条件下神经干细胞的增殖。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-10-01 DOI: 10.1080/10799893.2021.2019275
Jingti Jing, Haoming Jiang, Lin Zhang

Neurons and vascular cells compose neurovascular niches in the central nervous system where endothelial cells can promote neurogenesis via direct and indirect effects. Neurocytes and vascular cells are gravely destroyed upon spinal cord injury, which severely affects spinal motor functions. Neurogenesis originates from neural stem cells (NSCs) and endothelial cells derived from endothelial progenitor cells (EPCs) in the spinal cord. To demonstrate whether EPCs promote NSC proliferation, we cultured NSCs with EPC-conditioned medium from hypoxic conditions (CM) and EPC-unconditioned medium (UCM), i.e. endothelial cell basal medium-2, as a control. The number of S-phase cells in CM were 54.73 ± 0.67 whereas those in UCM were 26.30 ± 0.43, and the number of cells in CM was higher than that in UCM (0.32 ± 0.0019 vs. 0.55 ± 0.0029). We hypothesized that the cell proliferation was promoted by vascular endothelial growth factor A (VEGFA), which is secreted by EPCs in hypoxic conditions. We then used VEGF shRNA to decrease VEGFA secretion by EPCs. NSCs were cultured in conditioned medium from shRNA transfected EPCs under hypoxia (shRNA-CM) and EPC-conditioned medium under hypoxia (CM). The number of S-phase cells in the shRNA-CM was 36.86 ± 0.49 whereas that in CM was 53.61 ± 0.89, and the number of cells in the shRNA-CM was lower than that in CM (0.55 ± 0.0032 vs. 0.34 ± 0.0029). These data indicate that EPCs could promote NSC proliferation in hypoxic condition through VEGFA secretion.

神经元和血管细胞构成中枢神经系统的神经血管壁龛,内皮细胞通过直接和间接作用促进神经发生。脊髓损伤严重破坏神经细胞和血管细胞,严重影响脊髓运动功能。神经发生起源于神经干细胞(NSCs)和脊髓内皮祖细胞(EPCs)衍生的内皮细胞。为了证明EPCs是否促进NSC增殖,我们用缺氧条件下的EPCs条件培养基(CM)和内皮细胞基础培养基(UCM)培养NSCs作为对照。CM组s期细胞数为54.73±0.67个,UCM组为26.30±0.43个,且CM组细胞数高于UCM组(0.32±0.0019比0.55±0.0029)。我们假设缺氧条件下EPCs分泌的血管内皮生长因子A (VEGFA)促进了细胞增殖。然后我们使用VEGF shRNA减少EPCs的VEGFA分泌。将shRNA转染的EPCs在缺氧条件下(shRNA-CM)和缺氧条件下的EPCs条件培养基(CM)中培养NSCs。shRNA-CM中的s期细胞数为36.86±0.49个,而CM中的s期细胞数为53.61±0.89个,且shRNA-CM中的细胞数低于CM(0.55±0.0032 vs. 0.34±0.0029)。提示缺氧条件下EPCs可通过VEGFA分泌促进NSC增殖。
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引用次数: 4
SMILES-based QSAR and molecular docking study of xanthone derivatives as α-glucosidase inhibitors. 基于smiles的山酮类α-葡萄糖苷酶抑制剂QSAR与分子对接研究。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 Epub Date: 2021-08-12 DOI: 10.1080/10799893.2021.1957932
Shahin Ahmadi, Zohreh Moradi, Ashwani Kumar, Ali Almasirad

Increasing diabetic population is one of the major health concerns all over the world. Inhibition of α-glucosidase is a clinically proved and attractive strategy to manage diabetes. In this study, robust and reliable QSAR models to predict α-glucosidase inhibitory potential of xanthone derivatives are developed by the Monte Carlo technique. The chemical structures are represented by SMILES notation without any 3D-optimization. The significance of the index of ideality correlation (IIC) with applicability domain (AD) is also studied in depth. The models developed using CORAL software by considering IIC criteria are found to be statistically more significant and robust than simple balance of correlation. The QSAR models are validated by both internal and external validation methods. The promoters of increase and decrease of activity are also extracted and interpreted in detail. The interpretation of developed models explains the role of different structural attributes in predicting the pIC50 of xanthone derivatives as α-glucosidase inhibitors. Based on the results of model interpretation, modifications are done on some xanthone derivatives and 15 new molecules are designed. The α-glucosidase inhibitory activity of novel molecules is further supported by docking studies.

糖尿病人口的增加是全世界关注的主要健康问题之一。α-葡萄糖苷酶的抑制是一种临床证明和有吸引力的策略来管理糖尿病。本研究利用蒙特卡罗技术建立了稳健可靠的QSAR模型来预测山酮衍生物的α-葡萄糖苷酶抑制潜力。化学结构用SMILES符号表示,没有任何3d优化。并对理想相关指数(IIC)与适用域(AD)的意义进行了深入研究。通过考虑IIC标准,使用CORAL软件开发的模型在统计上比简单的相关平衡更显著和稳健。通过内部和外部验证方法对QSAR模型进行了验证。并对活性增减的促进因子进行了提取和详细解释。建立的模型解释了不同结构属性在预测山酮衍生物作为α-葡萄糖苷酶抑制剂的pIC50中的作用。在模型解释的基础上,对部分山酮衍生物进行了修饰,设计了15个新分子。对接研究进一步支持了新分子的α-葡萄糖苷酶抑制活性。
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引用次数: 8
Adrenergic receptor behaviors of mesenchymal stem cells obtained from different tissue sources and the effect of the receptor blockade on differentiation. 不同组织来源间充质干细胞肾上腺素能受体行为及受体阻断对分化的影响。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 Epub Date: 2021-07-29 DOI: 10.1080/10799893.2021.1957931
Erkan Maytalman, Arash Alizadeh Yegani, Ilknur Kozanoglu, Fazilet Aksu

In this study, it was aimed to analyze behavioral changes of adrenergic receptors (ARs) in first three passages and osteogenic/adipogenic differentiation of mesenchymal stem cells (MSCs) derived from placenta fetal membrane (FM) and bone marrow (BM). It was also aimed to evaluate effects of receptor blockade on differentiation. We obtained first three passages of MSCs from placenta and BM samples. For cell identification, the cells were analyzed by flow cytometry using CD34, CD45 and CD3, CD105 antibodies in each passage. The effects of propranolol and phenoxybenzamine at incremental doses were analyzed by MTT. In addition, cell cultures were separately maintained with the blockers or without after second passage. After each passage and differentiation, α1A, α1B, α2A, α2B, β1, β2, β3 AR-mRNA expressions analyzed by RT-qPCR technique. BMP6 and PPARG mRNA expressions only after differentiation and passage 3 were analyzed. A microscopic examination was also performed. Our results showed that AR expression behaviors were different in MSCs obtained from different tissue sources. In particular, α1A-AR and α2A-AR were expressed with considerably high coefficients in differentiation under blocker effect in BM-derived MSCs. No such coefficients were observed in any group of placental MSCs. In addition, it was found that the blockers stimulated adipogenesis in BM-derived MSCs during osteogenic differentiation. MSCs exhibit protein expressions that vary according to source of tissue and differentiation. Given that MSCs from different sources are used for repair and modulation, our study makes implications of this variable expression intriguing in the clinical practice.

本研究旨在分析胎盘胎膜(FM)和骨髓(BM)间充质干细胞(MSCs)前三代肾上腺素能受体(ARs)的行为变化和成骨/脂肪分化。本研究还旨在评价受体阻断对分化的影响。我们从胎盘和骨髓样本中获得了前三代MSCs。细胞鉴定用流式细胞术分析细胞,每代分别使用CD34、CD45和CD3、CD105抗体。用MTT法分析增加剂量的心得安和苯氧苄胺的作用。此外,在第二次传代后,分别用阻断剂或不加阻断剂维持细胞培养。每次传代和分化后,采用RT-qPCR技术分析α1A、α1B、α2A、α2B、β1、β2、β3 AR-mRNA的表达。BMP6和PPARG mRNA仅在分化和传代3后表达。还进行了显微镜检查。我们的研究结果表明,来自不同组织来源的MSCs的AR表达行为是不同的。特别是α1A-AR和α2A-AR在阻断剂作用下,在脑梗死来源的MSCs中以相当高的分化系数表达。在任何一组胎盘间充质干细胞中均未观察到此类系数。此外,我们还发现阻滞剂在成骨分化过程中刺激了bm来源的MSCs的脂肪生成。骨髓间充质干细胞的蛋白表达因组织来源和分化而异。鉴于来自不同来源的间充质干细胞被用于修复和调节,我们的研究使得这种变量表达在临床实践中具有有趣的意义。
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引用次数: 2
DFT based QSAR study on quinolone-triazole derivatives as antibacterial agents. 基于DFT的喹诺酮-三唑类抗菌药物的QSAR研究。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 Epub Date: 2021-10-24 DOI: 10.1080/10799893.2021.1988971
Niloofar Ghasedi, Shahin Ahmadi, Sepideh Ketabi, Ali Almasirad

QSAR modeling was performed on 39 quinolone-triazole derivatives against gram-positive Staphylococcus aureus and gram-negative Pseudomonas aeruginosa bacteria. The molecular structures were optimized using the DFT/B3LYP method and 6-31 G basis set. Molecular descriptors were extracted using quantum mechanical calculations. The hierarchical cluster analysis was performed for a rational subset division. The initial dataset was divided into calibration and validation sets, and modeling was done by stepwise MLR method for each of the two bacteria. Internal and external validation methods confirmed the robustness and predictability of the obtained models. According to the obtained model for S. aureus (R2 = 0.889, R2ext = 0.938, Q2LOO = 0.853), the four descriptors- partial atomic charges for the N1 atom in triazole and C7 of the quinolone nucleus, 4-carbonyl bond length, and 13C-NMR chemical shift of 3-carboxylic acid- were found to be the descriptors controlling the activity. According to the obtained model for P. aeruginosa (R2 = 0.957, R2ext = 0.923, Q2LOO = 0.909), the O atom's partial charge in carbonyl, LUMO-HOMO energy gap, and logP were found to be the descriptors having the highest correlation with the antibacterial activity. Finally, some new compounds with higher activities were designed and proposed.

建立了39种喹诺酮-三唑衍生物对革兰氏阳性金黄色葡萄球菌和革兰氏阴性铜绿假单胞菌的QSAR模型。采用DFT/B3LYP方法和6-31 G基组对分子结构进行优化。利用量子力学计算提取分子描述符。进行层次聚类分析,进行合理的子集划分。将初始数据集分为校准集和验证集,采用逐步MLR方法对两种细菌进行建模。内部和外部验证方法证实了所获得模型的鲁棒性和可预测性。根据所建立的金葡萄球菌模型(R2 = 0.889, R2 = 0.938, Q2LOO = 0.853),发现三唑和喹诺酮核C7中N1原子的部分电荷、4-羰基键长和3-羧酸的13C-NMR化学位移这四个描述子是控制活性的描述子。根据所建立的P. aeruginosa模型(R2 = 0.957, R2 = 0.923, Q2LOO = 0.909),发现O原子在羰基上的部分电荷、LUMO-HOMO能隙和logP是与抗菌活性相关性最高的描述符。最后,设计并提出了一些具有较高活性的新化合物。
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引用次数: 3
microRNA-199a downregulation alleviates hyperuricemic nephropathy via the PPARγ/β-catenin axis. microRNA-199a下调通过PPARγ/β-catenin轴缓解高尿酸血症肾病。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 Epub Date: 2021-08-25 DOI: 10.1080/10799893.2021.1967392
Peng Du, Ming Chen, Changcai Deng, Chonggui Zhu

Hyperuricemia always develops into hyperuricemic nephropathy (HN). The role of microRNA (miR) in HN is less studied. We aimed to discuss the role of miR-199a in HN. The expression of miR-199a and PPARγ in renal tissues of HN rats was detected. The targeting relation between miR-199a and PPARγ was verified. The contents of SCr, UA, BUN, and mALB, renal injury-relevant biomarkers were detected, and the pathological changes of renal tissue and renal interstitial fibrosis were observed by histological staining. After miR-199a and PPARγ knockdown, the contents of SCr, BUN, and mALB and renal interstitial fibrosis were estimated. Collectively, overexpression of miR-199a aggravated the renal injury in HN rats. By contrast, inhibition of miR-199a weakened renal injury, as evidenced by decreased contents of SCr, UA, BUN, and mALB, and mitigated renal interstitial fibrosis. miR-199a targeted PPARγ. Silencing of PPARγ upregulated the levels of downstream genes of β-catenin and the contents of SCr, UA, BUN, and mALB and deteriorated renal interstitial fibrosis. Moreover, the silencing of PPARγ blocked the alleviative effects of miR-199a inhibitor on the renal injury. Overall, miR-199a targets PPARγ and activates the β-catenin pathway, thus aggravating HN, which might provide a future target for the treatment of HN.

高尿酸血症常发展为高尿酸血症肾病(HN)。microRNA (miR)在HN中的作用研究较少。我们的目的是讨论miR-199a在HN中的作用。检测miR-199a和PPARγ在HN大鼠肾组织中的表达。验证miR-199a与PPARγ的靶向关系。检测SCr、UA、BUN、mALB及肾损伤相关生物标志物的含量,并通过组织学染色观察肾组织病理变化及肾间质纤维化情况。miR-199a和PPARγ敲低后,评估SCr、BUN和mALB的含量和肾间质纤维化。总之,miR-199a的过表达加重了HN大鼠的肾损伤。相比之下,miR-199a的抑制减弱了肾损伤,如SCr、UA、BUN和mALB含量的降低,并减轻了肾间质纤维化。miR-199a靶向PPARγ。PPARγ沉默可上调β-catenin下游基因水平和SCr、UA、BUN、mALB含量,加重肾间质纤维化。此外,PPARγ的沉默阻断了miR-199a抑制剂对肾损伤的缓解作用。总体而言,miR-199a靶向PPARγ并激活β-catenin通路,从而加重HN,这可能为HN的治疗提供未来的靶点。
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引用次数: 2
Long noncoding RNA LINC00858 promotes the progression of ovarian cancer via regulating the miR-134-5p/TRIM44 axis. 长链非编码RNA LINC00858通过调控miR-134-5p/TRIM44轴促进卵巢癌的进展。
IF 2.8 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Pub Date : 2022-08-01 Epub Date: 2021-08-23 DOI: 10.1080/10799893.2021.1968433
Pengbo Li, Gang Huang

Recent studies have shown that many long noncoding RNAs (lncRNAs) are abnormally expressed in ovarian cancer and involved in the pathological progress of ovarian cancer. In the present study, we aimed to investigate the role of lncRNA LINC00858 and the potential mechanism in ovarian cancer. The qRT-PCR was used to measure the expression levels of LINC00858 and miR-134-5p in ovarian cancer tissue specimens and cell lines. Loss-of-function assays were performed to investigate the role of LINC00858 in ovarian cancer. MTT assay was carried out to measure cell proliferation. Transwell assays were performed to determine cell migration and invasion. Biological information analysis and luciferase report gene assay were used to verify potential downstream genes of LINC00858. The xenograft mouse model was established to analyze tumor growth in vivo. Our results showed that LINC00858 was highly expressed in human ovarian cancer tissues and cell lines. Knockdown of LINC00858 inhibited cell proliferation, migration and invasion of SKOV3 cells, and suppressed tumor growth in mouse xenograft models. Mechanistic studies revealed that LINC00858 acted as a sponge of miR-134-5p and then regulated TRIM44 expression in SKOV3 cells. Furthermore, rescue experiments illustrated that inhibition of miR-134-5p restored the inhibitory effects of LINC00858 knockdown on cell proliferation, migration and invasion. TRIM44 overexpression could counteract the inhibitory effects of miR-134-5p mimics on ovarian cancer cells. In conclusion, these findings demonstrated that LINC00858 exerted oncogenic role in ovarian cancer, which was mediated by miR-134-5p/TRIM44 axis. Thus, LINC00858 might be a therapeutic target for the treatment of ovarian cancer.

近年来的研究表明,许多长链非编码rna (long noncoding RNAs, lncRNAs)在卵巢癌中异常表达,参与了卵巢癌的病理进展。在本研究中,我们旨在探讨lncRNA LINC00858在卵巢癌中的作用及其潜在机制。采用qRT-PCR检测LINC00858和miR-134-5p在卵巢癌组织标本和细胞系中的表达水平。进行功能丧失试验以研究LINC00858在卵巢癌中的作用。MTT法检测细胞增殖情况。Transwell法测定细胞迁移和侵袭。采用生物信息分析和荧光素酶报告基因检测对LINC00858的潜在下游基因进行验证。建立异种移植小鼠模型,分析肿瘤在体内的生长情况。结果表明,LINC00858在人卵巢癌组织和细胞系中高度表达。在小鼠异种移植瘤模型中,敲低LINC00858可抑制SKOV3细胞的增殖、迁移和侵袭,抑制肿瘤生长。机制研究表明,LINC00858作为miR-134-5p的海绵,进而调控SKOV3细胞中TRIM44的表达。此外,救援实验表明,抑制miR-134-5p恢复了LINC00858敲低对细胞增殖、迁移和侵袭的抑制作用。TRIM44过表达可以抵消miR-134-5p模拟物对卵巢癌细胞的抑制作用。综上所述,这些研究结果表明,LINC00858在卵巢癌中发挥了致癌作用,而这一作用是通过miR-134-5p/TRIM44轴介导的。因此,LINC00858可能成为卵巢癌的治疗靶点。
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Journal of Receptors and Signal Transduction
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