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Comparison of Machine Learning Classification Methods for Determining the Geographical Origin of Raw Milk Using Vibrational Spectroscopy 用振动光谱法确定原料奶产地的机器学习分类方法比较
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-12-08 DOI: 10.1155/2021/5845422
A. El Orche, Amine Mamad, Omar Elhamdaoui, A. Cheikh, M. El Karbane, M. Bouatia
One of the significant challenges in the food industry is the determination of the geographical origin, since products from different regions can lead to great variance in raw milk. Therefore, monitoring the origin of raw milk has become very relevant for producers and consumers worldwide. In this exploratory study, midinfrared spectroscopy combined with machine learning classification methods was investigated as a rapid and nondestructive method for the classification of milk according to its geographical origin. The curse of dimensionality makes some classification methods struggle to train efficient models. Thus, principal component analysis (PCA) has been applied to create a smaller set of features. The application of machine learning methods such as PLS-DA, PCA-LDA, SVM, and PCA-SVM demonstrates that the best results are obtained using PLS-DA, PCA-LDA, and PCA-SVM methods which show a correct classification rate (CCR) of 100% for PLS-DA and PCA-LDA and 94.95% for PCA-SVM, whereas the application of SVM without feature extraction gives a low CCR of 66.67%. These findings demonstrate that FT-MIR spectroscopy, combined with machine learning methods, is an efficient and suitable approach to classify the geographical origins of raw milk.
食品工业面临的一个重大挑战是地理来源的确定,因为来自不同地区的产品可能导致原料奶的差异很大。因此,监测原料奶的来源对全世界的生产者和消费者都非常重要。在本探索性研究中,研究了中红外光谱结合机器学习分类方法作为一种快速、无损的牛奶产地分类方法。维数的诅咒使得一些分类方法难以训练出有效的模型。因此,主成分分析(PCA)已被应用于创建一个较小的特征集。通过对PLS-DA、PCA-LDA、SVM和PCA-SVM等机器学习方法的应用表明,PLS-DA、PCA-LDA和PCA-SVM方法的分类效果最好,PLS-DA和PCA-LDA的正确分类率为100%,PCA-SVM的正确分类率为94.95%,而不进行特征提取的SVM的正确分类率较低,为66.67%。这些发现表明,FT-MIR光谱与机器学习方法相结合,是一种有效且合适的方法来对原料牛奶的地理来源进行分类。
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引用次数: 9
Quantification of the Spectral Variability of Ore-Bearing Granodiorite under Supervised and Semisupervised Conditions: An Upscaling Approach 监督和半监督条件下含矿花岗闪长岩光谱变异性的量化:一种升级方法
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-12-06 DOI: 10.1155/2021/2580827
Yaron Ogen, M. Denk, C. Glaesser, H. Eichstaedt, R. Kahnt, R. Loeser, Rudolf Suppes, M. Chimeddorj, Tugsbuyan Tsedenbaljir, Undrakhtamir Alyeksandr, Tsedendamba Oyunbuyan
Reflectance spectroscopy is a nondestructive, rapid, and easy-to-use technique which can be used to assess the composition of rocks qualitatively or quantitatively. Although it is a powerful tool, it has its limitations especially when it comes to measurements of rocks with a phaneritic texture. The external variability is reflected only in spectroscopy and not in the chemical-mineralogical measurements that are performed on crushed rock in certified laboratories. Hence, the spectral variability of the surface of an uncrushed rock will, in most cases, be higher than the internal chemical-mineralogical variability, which may impair statistical models built on field measurements. For this reason, studying ore-bearing rocks and evaluating their spectral variability in different scales is an important procedure to better understand the factors that may influence the qualitative and quantitative analysis of the rocks. The objectives are to quantify the spectral variability of three types of altered granodiorite using well-established statistical methods with an upscaling approach. With this approach, the samples were measured in the laboratory under supervised ambient conditions and in the field under semisupervised conditions. This study further aims to conclude which statistical method provides the best practical and accurate classification for use in future studies. Our results showed that all statistical methods enable the separation of the rock types, although two types of rocks have exhibited almost identical spectra. Furthermore, the statistical methods that supplied the most significant results for classification purposes were principal component analysis combined with k-nearest neighbor with a classification accuracy for laboratory and field measurements of 68.1% and 100%, respectively.
反射光谱学是一种无损、快速、易于使用的技术,可用于定性或定量地评估岩石成分。虽然它是一个强大的工具,但它也有其局限性,尤其是在测量显岩结构的岩石时。外部变异性仅反映在光谱学中,而不反映在经过认证的实验室对碎石进行的化学矿物学测量中。因此,在大多数情况下,未破碎岩石表面的光谱变异性将高于内部的化学-矿物学变异性,这可能会损害基于现场测量建立的统计模型。因此,研究含矿岩石并在不同尺度上评价其光谱变异性是更好地了解可能影响岩石定性和定量分析的因素的重要步骤。目的是量化光谱变异性的三种类型的蚀变花岗闪长岩使用完善的统计方法与升级方法。通过这种方法,样品在实验室监督的环境条件下和在半监督的条件下在现场进行测量。本研究进一步旨在总结哪种统计方法为未来的研究提供了最实用和准确的分类。结果表明,尽管两种岩石的光谱几乎相同,但所有的统计方法都能区分岩石类型。此外,为分类目的提供最显著结果的统计方法是主成分分析结合k近邻,其实验室和现场测量的分类精度分别为68.1%和100%。
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引用次数: 0
Qualitative Discrimination of Intact Tobacco Leaves Based on Near-Infrared Technology 基于近红外技术的完整烟叶定性鉴别
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-12-02 DOI: 10.1155/2021/8807199
Mengyao Lu, Qiang Zhou, Tian’en Chen, Junhui Li, Shuwen Jiang, Qin Gao, Cong Wang, Dong Chen
To explore the application of near-infrared (NIR) technology to the quality analysis of raw intact tobacco leaves, a nondestructive discrimination method based on NIR spectroscopy is proposed. A “multiregion + multipoint” NIR spectrum acquisition method is developed, allowing 18 NIR diffuse reflectance spectra to be collected from an intact tobacco leaf. The spectral characteristics and spectral preprocessing methods of intact tobacco leaves are analyzed, and then different spectra (independent or average spectra) and different algorithms (discriminant partial least-squares (DPLS) and Fisher’s discriminant algorithms) are used to construct discriminant models for verifying the feasibility of intact leaf modeling and determining the optimal model conditions. Qualitative discrimination models based on the position, green-variegated (GV), and the grade of intact tobacco leaves are then constructed using the NIR spectra. In the application and verification stage, a multiclassification voting mechanism is used to fuse the results of multiple spectra from a single tobacco leaf to obtain the final discrimination result for that leaf. The results show that the position-GV discrimination model constructed using independent spectra and the DPLS algorithm and the grade discrimination model constructed using independent spectra and Fisher’s algorithm achieve optimal results with intact leaf NIR wavenumbers from 5006–8988 cm−1 and the first-derivative and standard normal variate transformation preprocessing method. Finally, when applied to new tobacco leaves, the position-GV model and the grade model achieve discrimination accuracies of 95.18% and 92.77%, respectively. This demonstrates that the two models have satisfactory qualitative discrimination ability for intact tobacco leaves. This study has established a feasible method for the nondestructive qualitative discrimination of the position, GV, and grade of intact tobacco leaves based on NIR technology.
为探索近红外(NIR)技术在烟叶原料质量分析中的应用,提出了一种基于近红外光谱的烟叶无损鉴别方法。提出了一种“多区域+多点”近红外光谱采集方法,可采集完整烟叶的18个近红外漫反射光谱。分析了完整烟叶的光谱特征和光谱预处理方法,利用不同光谱(独立光谱或平均光谱)和不同算法(判别偏最小二乘(DPLS)和Fisher判别算法)构建判别模型,验证完整烟叶建模的可行性,确定最优模型条件。然后利用近红外光谱构建了基于烟叶位置、绿斑(GV)和烟叶等级的定性判别模型。在应用和验证阶段,采用多分类投票机制对单个烟叶的多光谱结果进行融合,得到该烟叶的最终识别结果。结果表明,当完整叶片近红外波数在5006 ~ 8988 cm−1范围内,采用一阶导数和标准正态变量变换预处理方法时,采用独立光谱和DPLS算法构建的位置- gv判别模型和独立光谱和Fisher算法构建的等级判别模型获得了最优结果。最后,将位置- gv模型和等级模型应用于新烟叶,识别准确率分别达到95.18%和92.77%。这表明两种模型对完整烟叶具有满意的定性判别能力。本研究建立了一种基于近红外技术无损定性鉴别烟叶位置、GV和等级的可行方法。
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引用次数: 2
Applying Energy-Dispersive X-Ray Fluorescence Analysis to Detect Tungsten Inclusions in Nuclear Fuel Rod End Plug TIG Welds 应用能量色散x射线荧光分析检测核燃料棒端塞TIG焊缝中的钨夹杂物
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-11-26 DOI: 10.1155/2021/9999042
Runqiu Gu, Jianfeng Cheng, Wanchang Lai, Guang-xi Wang
This study proposes a new method of detecting tungsten inclusions in nuclear fuel rod upper-end plug welds using energy-dispersive X-ray fluorescence (EDXRF) analysis. The Monte Carlo simulation method was used to simulate the process of detecting tungsten inclusions in nuclear fuel rod upper-end plug welds by the EDXRF. The detectable tungsten particle diameters in the zirconium alloy at different depths in welds and the detection limits of the trace tungsten dispersed in welds were obtained. Then, we constructed an experimental device that uses a CdTe detector with an X-ray tube. The results showed that the relative standard deviation of the net count rate of tungsten K-series characteristic X-rays [W (Kα)] was 1.46%, and the optimum parameters are a tube voltage of 150 kV and current of 0.5 mA. These values were used to perform energy-dispersive X-ray fluorescence analysis. These results were compared to the X-ray radiographic results, which were broadly similar. Furthermore, the results of EDXRF analysis were more legible and reliable than those from X-ray radiographic inspections. This study demonstrates the feasibility of applying EDXRF analysis to detect tungsten inclusions.
提出了一种利用能量色散x射线荧光(EDXRF)分析检测核燃料棒上端塞焊缝中钨夹杂物的新方法。采用蒙特卡罗模拟方法模拟了EDXRF检测核燃料棒上端塞焊缝中钨夹杂物的过程。得到了锆合金在不同焊缝深度处可检测到的钨颗粒直径和分散在焊缝中的痕量钨的检出限。然后,我们构建了一个实验装置,使用CdTe探测器与x射线管。结果表明,钨k系列特征x射线净计数率的相对标准偏差[W (Kα)]为1.46%,最佳参数为管电压为150 kV,电流为0.5 mA。这些值用于进行能量色散x射线荧光分析。这些结果与x光片结果比较,两者大致相似。此外,EDXRF分析结果比x射线检查结果更清晰可靠。本研究证明了应用EDXRF分析检测钨夹杂物的可行性。
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引用次数: 0
Rapid Screening and Estimation of Binding Constants for Interactions of Fe3+ with Two Metalloproteins, Apotransferrin and Transferrin, Using Affinity Mode of Capillary Electrophoresis 利用毛细管电泳亲和模式快速筛选Fe3+与转铁蛋白和转铁蛋白相互作用的结合常数
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-11-19 DOI: 10.1155/2021/6987454
M. Al Bratty, H. Alhazmi, S. Javed, Z. Rehman, A. Najmi, K. El-Sharkawy
The interaction behavior of Fe3+ with transferrin and apotransferrin (iron-free form) was investigated in this study using affinity capillary electrophoresis. Change in the mass and charge of protein upon binding to the metal ion in the capillary tube led to variation in its migration time and was used to measure the noncovalent binding interactions by fast screening method. Acetanilide was used as the electroosmotic flow (EOF) marker to avoid possible errors due to the change in EOF during the experiment. The binding results were calculated from the mobility ratios of protein (Ri) and EOF marker (Rf) using the formula (Ri − Rf)/Rf or ∆R/Rf. For more comprehensive understanding, the kinetics of the interaction was studied and binding constants were calculated. Results showed that the Fe3+ displayed insignificant interaction with both proteins at lower metal ion concentrations (5–25 μmol/mL). However, transferrin exhibited significant interactions with the metal ion at 50 and 100 μmol/mL (ΔR/Rf = 0.0114 and 0.0201, resp.) concentrations and apotransferrin showed strong binding interactions (ΔR/Rf = −0.0254 and 0.0205, resp.) at relatively higher Fe3+ concentrations of 100 and 250 μmol/mL. The binding constants of 18.968 mmol−1 and −13.603 mmol−1 were recorded for Fe3+ interaction with transferrin and apotransferrin, respectively, showing significant interactions. Different binding patterns of Fe3+ with both proteins might be attributed to the fact that the iron-binding sites in transferrin have already been occupied, which was not the case in apotransferrin. The present study may be used as a reference for the investigation of protein-metal ion, drug-protein, drug-metal ion, and enzyme-metal ion interactions and may be helpful to provide preliminary insight into the new metal-based drug development.
采用亲和毛细管电泳技术研究了铁离子与转铁蛋白和转铁蛋白(无铁形式)的相互作用行为。蛋白质在毛细管中与金属离子结合时质量和电荷的变化导致其迁移时间的变化,并通过快速筛选方法用于测量非共价结合相互作用。采用乙酰苯胺作为电渗流量(EOF)标记物,避免实验过程中EOF的变化可能造成的误差。结合结果由蛋白质(Ri)和EOF标记物(Rf)的迁移率比计算,公式为(Ri−Rf)/Rf或∆R/Rf。为了更全面的理解,研究了相互作用的动力学并计算了结合常数。结果表明,在较低的金属离子浓度(5 ~ 25 μmol/mL)下,Fe3+与两种蛋白的相互作用不显著。转铁蛋白在50和100 μmol/mL浓度下(ΔR/Rf = 0.0114和0.0201)与金属离子表现出显著的相互作用,转铁蛋白在较高的Fe3+浓度(100和250 μmol/mL)下表现出较强的结合相互作用(ΔR/Rf = - 0.0254和0.0205)。Fe3+与转铁蛋白和转铁蛋白相互作用的结合常数分别为18.968 mmol−1和- 13.603 mmol−1,显示出显著的相互作用。Fe3+与两种蛋白的不同结合模式可能是由于转铁蛋白中的铁结合位点已经被占据,而转铁蛋白中则没有。本研究可为蛋白质-金属离子、药物-蛋白质、药物-金属离子、酶-金属离子相互作用的研究提供参考,并为新型金属基药物的开发提供初步思路。
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引用次数: 3
Spectral Characteristics of Needle Array-Plate Dielectric Barrier Discharge Plasma and Its Activated Water 针阵列-板介质阻挡放电等离子体及其活性水的光谱特性
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-11-01 DOI: 10.1155/2021/9771245
Yibing Li, Zhiqing Song, Tao Zhang, W. Xu, C. Ding, Hao Chen
The plasma-activated water (PAW), as a new environmentally friendly nonthermal processing technology, has attracted wide attention for its applications in agriculture, food, and biomedical fields. This paper used the needle array-plate dielectric barrier discharge (needle array-plate DBD) device to activate deionized water and prepare PAW simply and efficiently. It was found that the concentration of reactive oxygen and nitrogen species (RONS) generated in the process of needle array-plate DBD was large and varied. Especially in the wavelength range of 600–770 nm, the spectral intensity is stronger. And, the ionic wind is more likely to interact with the deionized water. The changes in PAW parameters and UV/Vis spectra with treatment time were measured under different voltages and needle-dielectric plate distances. Results show that increasing discharge voltage or decreasing needle-dielectric plate distance increases the concentration of RONS, ionic wind speed, water evaporation, and conductivity of the PAW and decreases pH. UV/Vis spectra results show that prolonged treatment time results in increased total absorbance and concentrations of H2O2 and NO 3 − and that a new absorption peak appears at 210 nm in the UV/Vis spectra. When the wavelength is larger than 210 nm, a redshifted new peak and color enhancement are observed. The seeds of Astragalus adsurgens Pall were treated by discharge plasma, PAW, and the combination of plasma and PAW. It was found that high voltage and long-time activated PAW could significantly increase the ROS level of seeds and seedlings after germination for 3 days, resulting in oxidative stress damage. The survival rate of seeds was lower than that under the half lethal dose. This paper provides a feasible device design for treating activated water in large quantities with high efficiency, which is important for the application of PAW and mutation breeding of A. adsurgens Pall.
等离子体活化水(PAW)作为一种新型的环境友好型非热处理技术,在农业、食品、生物医学等领域的应用受到了广泛关注。本文采用针阵-板介质阻挡放电(needle array-plate DBD)装置对去离子水进行活化,简单高效地制备了PAW。结果表明,针阵板DBD过程中产生的活性氧和活性氮(RONS)浓度较大且变化较大。特别是在600 ~ 770 nm波长范围内,光谱强度更强。离子风更有可能与去离子水相互作用。在不同电压和针-介电板距离下,测定了PAW参数和紫外可见光谱随处理时间的变化。结果表明,增大放电电压或减小针-介电板距离可使材料的离子风速、水分蒸发和电导率增加,ph值降低。紫外/可见光谱结果表明,延长处理时间可使材料的总吸光度、H2O2和no3−浓度增加,并在210 nm处出现新的吸收峰。当波长大于210 nm时,观察到新峰红移和颜色增强。采用放电等离子体、PAW及等离子体与PAW联合处理沙棘黄芪种子。结果发现,高电压和长时间激活的PAW能显著提高种子和幼苗萌发3天后的ROS水平,造成氧化应激损伤。半致死剂量下种子成活率较低。本文提供了一种可行的高效、大批量处理活性水的装置设计,对PAW的应用和沙胶藻的突变育种具有重要意义。
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引用次数: 3
Study of the Effects of Heating on Organic Matter and Mineral Phases in Limestones 加热对石灰石有机质和矿物相影响的研究
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-10-29 DOI: 10.1155/2021/9082863
J. May-Crespo, P. Martinez-Torres, P. Quintana, J. Alvarado-Gil, L. Vilca-Quispe, N. Camacho
Color-induced changes in stones due to heating can be useful in determining the degree of degradation generated in their components and structure. We evaluate the effect of heating in three types of limestones, useful in building and restoration, corresponding to biomicrite (BC), biosparite (BS), and intramicrite (IM), in the range of temperature from 100°C to 600°C. Our analyses indicate that the strongest changes in reflectance occur in the samples of intramicrite, followed by biomicrite, being biosparite showing the smallest ones. Additionally, IM samples suffer the largest modifications in effective porosity due to the thermal treatment; in contrast, BS and BC samples show smaller temperature-induced alterations associated with smaller changes in reflectance. Moreover, we reveal that most of the thermally induced variations are associated, in this range of temperature, to the dehydroxylation of goethite that transforms into hematite, as well as by the burning and partial release of the organic matter present in the rock. Colorimetry analyses show that the sequence of thermally induced changes can be followed by the evolution of the three coordinates, L ∗ (lightness), a ∗ (red-green), and b ∗ (yellow-blue), of the CIE 1976 L ∗ a ∗ b ∗ space.
由于加热而引起的颜色变化可以用于确定其成分和结构的降解程度。我们在100°C到600°C的温度范围内,评估了加热对三种类型的石灰石的影响,这些石灰石分别是生物泥晶岩(BC)、生物长晶石(BS)和泥晶岩(IM),它们对建筑和修复都很有用。我们的分析表明,反射率变化最强烈的是泥晶岩样品,其次是生物泥晶,其中生物矽晶的反射率变化最小。此外,由于热处理,IM样品的有效孔隙度变化最大;相比之下,BS和BC样品显示较小的温度引起的变化与较小的反射率变化相关。此外,我们发现,在这个温度范围内,大多数热诱导的变化与针铁矿转化为赤铁矿的去羟基化以及岩石中存在的有机物的燃烧和部分释放有关。比色分析表明,热诱导变化的序列可以由CIE 1976 L∗a∗b∗空间的三个坐标L∗(亮度),a∗(红绿)和b∗(黄蓝)的演变所遵循。
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引用次数: 1
Monitoring Sea Ice in Liaodong Bay of Bohai Sea during the Freezing Period of 2017/2018 Using Sentinel-2 Remote Sensing Data 基于Sentinel-2遥感数据的2017/2018冰冻期辽东湾海冰监测
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-10-29 DOI: 10.1155/2021/9974845
Zhiyong Wang, Peilei Sun, Lihua Wang, Mengyue Zhang, Zihao Wang
It is of great significance to monitor sea ice for relieving and preventing sea ice disasters. In this paper, the growth and development of sea ice in Liaodong Bay of Bohai Sea in China were monitored using Sentinel-2 remote sensing data during the freezing period from January to March in 2018. Based on the comprehensive analysis of the spectral characteristics of seawater and sea ice in visible bands, supplemented by the Normalized Difference Snow Index (NDSI) and the Normalized Difference Vegetation Index (NDVI), we proposed a new method based on decision tree classification for extracting sea ice types in Liaodong Bay of Bohai Sea. Using the remote sensing data of eight satellite overpasses acquired from Sentinel-2A/B satellites, the distribution and area of the different sea ice types in Liaodong Bay during the freezing period of 2017/2018 were obtained. Compared with the maximum likelihood (ML) classification method and the support vector machine (SVM) classification method, the proposed method has higher accuracy when discriminating the sea ice types, which proved the new method proposed in this paper is suitable for extracting sea ice types from Sentinel-2 optical remote sensing data in Liaodong Bay. And its classification accuracy reaches 88.05%. The whole process of evolution such as the growth and development of sea ice in Liaodong Bay during the freezing period from January to March in 2018 was monitored. The maximum area of sea ice was detected on 27 January 2018, about 10,187 km2. At last, the quantitative relationship model between the sea ice area and the mean near-surface temperature derived by MODIS data in Liaodong Bay was established. Through research, we found that the mean near-surface temperature was the most important factor for affecting the formation and melt of sea ice in Liaodong Bay.
海冰监测对缓解和预防海冰灾害具有重要意义。利用2018年1 - 3月冰冻期Sentinel-2遥感数据,对中国渤海辽东湾海冰的生长发育进行了监测。在综合分析海水和海冰可见光波段光谱特征的基础上,结合归一化差雪指数(NDSI)和归一化差植被指数(NDVI),提出了一种基于决策树分类的渤海辽东湾海冰类型提取新方法。利用Sentinel-2A/B卫星获取的8个卫星立交桥遥感数据,分析了2017/2018年冰冻期辽东湾不同海冰类型的分布和面积。与最大似然(ML)分类方法和支持向量机(SVM)分类方法相比,本文方法在区分海冰类型方面具有更高的精度,证明了本文方法适用于从辽东湾Sentinel-2光学遥感数据中提取海冰类型。分类准确率达到88.05%。对2018年1 - 3月封冻期辽东湾海冰生长发育等演变全过程进行了监测。2018年1月27日探测到的海冰面积最大,约为10187平方公里。最后,利用MODIS数据建立了辽东湾海冰面积与平均近地表温度的定量关系模型。通过研究发现,平均近地表温度是影响辽东湾海冰形成和融化的最重要因素。
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引用次数: 4
Experimental and Theoretical Investigations of Terahertz Spectra of the Structural Isomers: Mannose and Galactose 甘露糖和半乳糖结构异构体太赫兹光谱的实验和理论研究
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-10-26 DOI: 10.1155/2021/3469262
Tongjun Zhang, Shasha Yan, Jianjun Hao, Dehua Li
The high-resolution terahertz spectra of the two structural isomers, mannose and galactose, have been measured by terahertz time-domain spectroscopy (THz-TDS) in the range of 0.5–4.0 THz at room temperature. Significant differences between these similar molecules have been found in their THz characteristic spectra, implying that THz-TDS is a powerful tool for identifying isomers. Structural analyses and normal mode calculations of the two systems were performed using solid-state density functional theory (DFT) with the PBE and PW91 density functionals as well as using gas-state DFT with B3LYP hybrid functional. Among these calculations, the solid-state simulated results obtained from the PBE method exhibit a good agreement with the experimentally measured spectra. According to the calculated results of PBE, the observed spectral features were assigned as primarily external lattice translations, deformations, and rotations with lesser contributions due to intramolecular motion of pyranose ring, CH2OH group, and hydroxyl groups.
用太赫兹时域光谱(THz- tds)测量了甘露糖和半乳糖两种结构异构体在室温下0.5 ~ 4.0太赫兹范围内的高分辨率太赫兹光谱。这些相似分子之间的太赫兹特征光谱存在显著差异,这意味着太赫兹- tds是识别同分异构体的有力工具。采用固体密度泛函理论(DFT)和PBE、PW91密度泛函,以及气体密度泛函和B3LYP混合泛函,对两种体系进行了结构分析和正态计算。在这些计算中,PBE方法得到的固体模拟结果与实验测量的光谱具有较好的一致性。根据PBE的计算结果,观察到的光谱特征主要是外部晶格平移、变形和旋转,pyranose环、CH2OH基团和羟基的分子内运动贡献较小。
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引用次数: 2
Dynamic Variation in Hippocampal Metabolism after Acute Stress Exposure: An In Vivo Proton Magnetic Resonance Spectroscopy Study at 9.4 T 急性应激暴露后海马代谢的动态变化:9.4 T体内质子磁共振波谱研究
IF 2 4区 化学 Q4 BIOCHEMICAL RESEARCH METHODS Pub Date : 2021-10-20 DOI: 10.1155/2021/6533727
Y. H. Hwang, Min-Hee Lee, Chang-Soo Yun, Yong-Tae Kim, H. Baek, B. Han, Dong Youn Kim
An acute stress response is a complex process that activates the neuroendocrine and metabolic systems for homeostasis. A study on acute stress is important to understand how an organism adapts to stress for survival. However, most studies have focused on chronic stress, and there are few studies on acute stress. They have analyzed the metabolic alterations in the brain at a particular time after acute stress. This study explored the temporal variations of the brain metabolites in the hippocampus after acute restraint stress using proton magnetic resonance spectroscopy. All mice in the acute stress group were physically restrained for two hours in a 50 mL conical tube. A 9.4 T animal MRI and MRS scanner was used with point-resolved spectroscopy technique for data acquisition, which was repeated four times without interscan interval. Metabolites were quantified from the data using LCModel with a simulated basis set. Based on the change in concentration of metabolites, the data were statistically analyzed using two-way repeated-measures analysis of variance between groups and a support vector machine for all time points and Student’s t-test with FDR correction for each time point. The present study found that the differences between groups are significantly ( P < 0.05 ) presented in alanine and glutamate. The effect of time of the two metabolites significantly exists ( P < 0.05 ): the first, second, and third time points in alanine and the first and second time points in glutamate. A combination of stress-specific metabolites (alanine, glutamate, N-acetyl-aspartate) that best reflect the influence of acute stress was determined using a support vector machine. These findings may indicate the importance of the timing of analysis after acute stress and provide new insights into a deeper understanding of acute stress response, including the molecular mechanism of stress-related disorders and stress resilience or vulnerability.
急性应激反应是一个复杂的过程,它激活神经内分泌和代谢系统以维持体内平衡。对急性应激的研究对于了解生物体如何适应应激生存是很重要的。然而,大多数研究都集中在慢性应激上,对急性应激的研究很少。他们分析了急性应激后特定时间大脑的代谢变化。本研究利用质子磁共振波谱技术探讨急性约束应激后海马区脑代谢物的时间变化。急性应激组小鼠在50 mL锥形管中物理约束2小时。使用9.4 T动物MRI和MRS扫描仪,采用点分辨光谱技术进行数据采集,重复4次,无扫描间隔。使用LCModel和模拟基集对数据进行代谢物量化。根据代谢物浓度的变化,采用双向重复测量组间方差分析和支持向量机对所有时间点进行统计分析,并对每个时间点进行FDR校正的Student 's t检验。本研究发现,谷氨酸和丙氨酸组间差异显著(P < 0.05)。两种代谢物的时间影响显著(P < 0.05):丙氨酸在第一、第二、第三时间点,谷氨酸在第一、第二时间点。使用支持向量机确定了最能反映急性应激影响的应激特异性代谢物(丙氨酸、谷氨酸、n -乙酰-天冬氨酸)的组合。这些发现可能表明急性应激后分析时间的重要性,并为深入了解急性应激反应提供新的见解,包括应激相关疾病和应激恢复或脆弱性的分子机制。
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引用次数: 1
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Journal of Spectroscopy
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