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Impact of changing PI-RADS cutoff on prostate cancer detection by MRI cognitive fusion biopsy in biopsy-naïve patients. 改变PI-RADS切断对biopsy-naïve患者MRI认知融合活检检测前列腺癌的影响。
IF 1.8 Q3 ONCOLOGY Pub Date : 2023-03-06 DOI: 10.1186/s43046-023-00165-4
Hesham Abdel-Azim El-Helaly, Asem Abdel-Aziz Mahmoud, Ahmed Mohamed Magdy, Abdelwahab Hasehem, Hamdy Mohamed Ibrahim, Khaled Moheyelden Mohamed, Mohamed Hamdy Ismail

Background: Multi-parametric magnetic resonance imaging may improve the detection of prostate cancer. The aim of this work is to compare between PI-RADS 3-5 and PI-RADS 4-5 as a threshold for targeted prostatic biopsy.

Methods: This is a prospective clinical study that included 40 biopsy-naïve patients referred for prostate biopsy. Patients underwent prebiopsy multi-parametric (mp-MRI), followed by 12-core transrectal ultrasound-guided systematic biopsy and cognitive MRI/TRUS fusion targeted biopsy from each detected lesion. The primary endpoint was to assess the diagnostic accuracy of the PI-RAD 3-4 versus PI-RADS 4-5 lesion by mpMRI for prostate cancer detection in biopsy-naive men.

Results: The overall prostate cancer detection rate and the clinically significant cancer detection rate were 42.5% and 35%, respectively. Targeted biopsies from PI-RADS 3-5 lesions showed a sensitivity of 100%, specificity of 44%, positive predictive value of 51.7%, and negative predictive value of 100%. Restricting targeted biopsies to PI-RADS 4-5 lesions resulted in a decrease in sensitivity and negative predictive value to 73.3% and 86.2%, respectively, while specificity and positive predictive value were increased to 100% for both parameters which was statistically significant (P value < 0.0001 and P value = 0.004, respectively).

Conclusions: Limiting the TBs to PI-RADS 4-5 lesions improves the performance of mp-MRI in the detection of prostate cancer especially aggressive tumors.

背景:多参数磁共振成像可以提高前列腺癌的检出率。这项工作的目的是比较PI-RADS 3-5和PI-RADS 4-5作为靶向前列腺活检的阈值。方法:这是一项前瞻性临床研究,包括40例biopsy-naïve患者转介前列腺活检。患者进行活检前多参数(mp-MRI)检查,随后对每个检测到的病变进行12核经直肠超声引导的系统活检和认知MRI/TRUS融合靶向活检。主要终点是评估PI-RADS 3-4与PI-RADS 4-5病变在未接受活检的男性前列腺癌检测中的mpMRI诊断准确性。结果:总体前列腺癌检出率为42.5%,临床显著癌检出率为35%。PI-RADS 3-5病灶的靶向活检敏感性为100%,特异性为44%,阳性预测值为51.7%,阴性预测值为100%。将靶向活检限制在PI-RADS 4-5病灶范围内,敏感性和阴性预测值分别降低至73.3%和86.2%,特异性和阳性预测值均提高至100%,差异有统计学意义(P值)。结论:将靶活检限制在PI-RADS 4-5病灶范围内,可提高mp-MRI对前列腺癌尤其是侵袭性肿瘤的检测效果。
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引用次数: 0
Studying ferroptosis and iron metabolism pre- and post-radiotherapy treatment in breast cancer patients. 乳腺癌患者放疗前后铁下垂及铁代谢的研究。
IF 1.8 Q3 ONCOLOGY Pub Date : 2023-02-27 DOI: 10.1186/s43046-023-00162-7
Sanaa A El-Benhawy, Ibrahim G Abdelrhman, Nadia A Sadek, Enayat I Fahmy, Ahmed A AboGabal, Hossam Elmasry, Sally A M Saleh, Ola A Sakr, Mona Nagy Elwany, Maha Abubakr Feissal Rabie

Background: Radiotherapy (RT) is an important part of the treatment of many tumors. Radiotherapy causes oxidative damage in all cellular compartments, including lipid membrane, on a random basis. Toxic lipid peroxidation accumulation has only lately been linked to a regulated type of cell death known as ferroptosis. Iron is required for ferroptosis sensitization in cells.

Aim of the work: This work aimed to study ferroptosis and iron metabolism before and after RT in BC patients.

Subjects and methods: Eighty participants were included divided into two main groups: group I: 40 BC patients treated with RT. Group II: 40 healthy volunteers' age and sex matched as control group. Venous blood samples were collected from BC patients (prior to and after RT) and healthy controls. Glutathione (GSH), malondialdehyde (MDA), serum iron levels and % of transferrin saturation were measured by colorimetric technique. Ferritin, ferroportin, and prostaglandin-endoperoxide synthase 2 (PTGS2) levels were assessed by ELISA.

Results: Serum ferroportin, reduced glutathione, and ferritin showed significant decrease after radiotherapy in comparison to before radiotherapy. However, there was significant increase in serum PTGS2, MDA, % of transferrin saturation and iron levels after radiotherapy in comparison to before radiotherapy.

Conclusion: Radiotherapy induced ferroptosis in breast cancer patients as a new cell death mechanism and PTGS2 is a biomarker of ferroptosis. Iron modulation is a useful approach for the treatment of BC especially if combined with targeted therapy and immune-based therapy. Further studies are warranted to be translated into clinical compounds.

背景:放射治疗是许多肿瘤治疗的重要组成部分。放射治疗在包括脂质膜在内的所有细胞区室中随机引起氧化损伤。毒性脂质过氧化积累直到最近才与一种被称为铁下垂的受调节类型的细胞死亡联系起来。铁是细胞中铁下垂致敏所必需的。工作目的:本工作旨在研究BC患者RT前后铁下垂和铁代谢。对象和方法:80名参与者分为两组:第一组:40名接受rt治疗的BC患者;第二组:40名年龄和性别匹配的健康志愿者作为对照组。从BC患者(放疗前后)和健康对照者中采集静脉血样本。采用比色法测定谷胱甘肽(GSH)、丙二醛(MDA)、血清铁水平和转铁蛋白饱和度%。ELISA法检测铁蛋白、运铁蛋白和前列腺素内过氧化物合成酶2 (PTGS2)水平。结果:放疗后血清运铁蛋白、还原性谷胱甘肽、铁蛋白较放疗前明显降低。然而,与放疗前相比,放疗后血清PTGS2、MDA、转铁蛋白饱和度和铁水平明显升高。结论:放疗诱导乳腺癌患者铁下垂是一种新的细胞死亡机制,PTGS2是铁下垂的生物标志物。铁调节是治疗BC的一种有用的方法,特别是如果与靶向治疗和免疫治疗相结合。进一步的研究应转化为临床化合物。
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引用次数: 4
The incidence and trends of laryngeal malignancies in Sri Lanka from 2001 to 2019: a Joinpoint analysis of the national cancer database. 2001年至2019年斯里兰卡喉恶性肿瘤的发病率和趋势:国家癌症数据库的联合点分析
IF 1.8 Q3 ONCOLOGY Pub Date : 2023-02-21 DOI: 10.1186/s43046-023-00163-6
Umesh Jayarajah, Ravindri Jayasinghe, Ashan Fernando, Sanjeewa Seneviratne

Introduction: Laryngeal cancer is the ninth commonest cancer among Asian males. Global and regional epidemiological analyses have shown varying patterns in the incidence and risk factors for laryngeal cancer. Therefore, we aimed to analyse the trends in the incidence and histological patterns of laryngeal cancers for the first time in Sri Lanka.

Methods: We used the population-based Sri Lanka cancer registry data and pooled all newly diagnosed patients with laryngeal malignancies from 2001 to 2019 (a 19-year study period). The WHO age-standardised incidence rates (ASR) were calculated using the WHO standard pollution. We used the Joinpoint regression software to calculate the estimated annual percentage change (EAPC) and analysed the trends in the incidence by different age categories and sex.

Results: From 2001 to 2019, 9808 new cases of laryngeal cancers (males = 8927, 91%, mean age = 62 years) were registered. The incidence of laryngeal cancers was greatest in the 70-74-year followed by 65-69-year age groups. Around 7.9% were reported as carcinoma not otherwise specified (NOS). Squamous cell carcinoma (90.1%) was the commonest documented histology type. A rise in the WHO-ASR was noted from 1.91 per 100,000 in 2001 [95% confidence interval (95% CI): 1.69-2.12] to 3.59 per 100,000 in 2017 [(95% CI: 3.34-3.84); EAPC: 4.4 (95% CI: 3.7-5.2), p < 0.05 for trend] followed by a decrease in the incidence [2.97 per 100,000 in 2019 (95% CI: 2.74-3.2), EAPC: - 7.2 (95% CI: - 21.1-9.1, p > 0.05)]. From 2001 to 2017, the proportional increase in incidence was greater in males than females [EAPC: 4.9 (95% CI: 4.1-5.7 vs. 3.7 (95% CI: 1.7-5.6)].

Conclusions: We identified an increasing incidence of laryngeal cancer in Sri Lanka from 2001 to 2017 followed by a slight decrease. Further studies are essential to identify the aetiological factors. Development of laryngeal cancer prevention and screening programmes for high-risk populations may be considered.

简介:喉癌是亚洲男性第九常见的癌症。全球和区域流行病学分析显示喉癌的发病率和危险因素有不同的模式。因此,我们的目的是首次分析斯里兰卡喉癌发病率和组织学模式的趋势。方法:我们使用基于人群的斯里兰卡癌症登记数据,并汇集了2001年至2019年(19年研究期)所有新诊断的喉部恶性肿瘤患者。采用WHO污染标准计算WHO年龄标准化发病率(ASR)。我们使用Joinpoint回归软件计算估计的年百分比变化(EAPC),并分析不同年龄类别和性别的发病率趋势。结果:2001 - 2019年,共登记喉癌新发病例9808例(男性8927例,占91%,平均年龄62岁)。喉癌的发病率在70-74岁年龄组中最高,其次是65-69岁年龄组。约7.9%报告为非特异性癌(NOS)。鳞状细胞癌(90.1%)是最常见的组织学类型。世卫组织asr从2001年的每10万人1.91例[95%可信区间(95% CI): 1.69-2.12]上升到2017年的每10万人3.59例[95% CI: 3.34-3.84];EAPC: 4.4 (95% CI: 3.7-5.2), p 0.05)。从2001年到2017年,男性发病率的比例增幅大于女性[EAPC: 4.9 (95% CI: 4.1-5.7 vs. 3.7 (95% CI: 1.7-5.6)]。结论:我们发现,从2001年到2017年,斯里兰卡的喉癌发病率呈上升趋势,随后略有下降。进一步的研究是确定病因的必要条件。可考虑为高危人群制定喉癌预防和筛查方案。
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引用次数: 0
Parotid gland masses: outcomes in the pediatric age group. 腮腺肿块:儿童年龄组的预后。
IF 1.8 Q3 ONCOLOGY Pub Date : 2023-02-06 DOI: 10.1186/s43046-023-00161-8
Alaa Younes, Mohammad Fouad Taher, Iman Sidhom, Wael Zekri, Iman Zaky, Habiba Elfendy, Azza Niazy Taher, Suzan Adlan Khedr, Rana Gamal, Gehad Ahmed

Background: Childhood parotid neoplasms appear to have different characteristics from adults. This point, in addition to the rarity of these tumors, reflects the challenges faced in diagnosing and treating parotid neoplasms in children.

Patients and methods: This retrospective study included all children who presented to the Children's Cancer Hospital Egypt (CCHE, 57357) with parotid masses from January 2008 to December 2020.

Results: Twenty-one patients were included. Malignant neoplasms were found in 12 (57.1%) of which mucoepidermoid carcinoma was the most common. Benign neoplasms were found in 6 (28.6%) all of them were pleomorphic adenoma, and non-neoplastic lesions were found in 3 (14.3%). Superficial, deep, or total parotidectomy was performed according to the involved lobes. The facial nerve was sacrificed in three cases because of frank invasion by the tumor. Neck dissection was considered in clinically positive lymph nodes and/or T3/4 masses. Complications occurred in 7 (33.3%) all were of the malignant cases. Adjuvant radiotherapy was restricted to high-risk cases (7 cases). Recurrence occurred in two cases, and one patient died of distant metastasis. Fine needle aspiration cytology (FNAC) showed 88.9% sensitivity and 100% specificity for diagnosing malignant neoplasms. The correlation of radiological and pathological staging was fair (66.74% for overall staging).

Conclusions: Parotidectomy is the backbone treatment for benign and malignant pediatric parotid tumors. Neck nodal dissection should be considered after preoperative FNAC of suspicious nodes. Adjuvant radiotherapy is considered only in high-risk tumors. Preoperative FNAC of parotid masses and clinically suspicious lymph nodes is highly recommended.

背景:儿童腮腺肿瘤似乎与成人有不同的特征。这一点,除了这些肿瘤的罕见性,反映了诊断和治疗儿童腮腺肿瘤所面临的挑战。患者和方法:本回顾性研究包括2008年1月至2020年12月期间在埃及儿童癌症医院(CCHE, 57357)就诊的所有腮腺肿物患儿。结果:纳入21例患者。恶性肿瘤12例(57.1%),以黏液表皮样癌最为常见。良性肿瘤6例(28.6%),均为多形性腺瘤,非肿瘤性病变3例(14.3%)。根据受累的腮腺进行浅、深或全腮腺切除术。3例因肿瘤侵袭而牺牲面神经。临床阳性淋巴结和/或T3/4肿块考虑颈部清扫。并发症7例(33.3%),均为恶性病例。辅助放疗仅限于高危病例(7例)。2例复发,1例死于远处转移。细针吸细胞学(FNAC)诊断恶性肿瘤的敏感性为88.9%,特异性为100%。放射学分期与病理分期相关性较好(总分期66.74%)。结论:腮腺切除术是小儿腮腺良恶性肿瘤的主要治疗方法。术前对可疑淋巴结行FNAC后,应考虑行颈部淋巴结清扫术。辅助放疗仅用于高危肿瘤。建议术前对腮腺肿物及临床可疑淋巴结行FNAC检查。
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引用次数: 0
Impact of cetuximab plus cisplatin alone and cetuximab plus cisplatin and paclitaxel regimen on humanistic outcome in head and neck cancer. 西妥昔单抗联合顺铂单独治疗和西妥昔单抗联合顺铂和紫杉醇治疗方案对头颈癌人文预后的影响。
IF 1.8 Q3 ONCOLOGY Pub Date : 2023-01-19 DOI: 10.1186/s43046-023-00160-9
Avinash Khadela, Bhavin Vyas, Mustakim Mansuri, Dipen Sureja, Kunjan Bodiwala

Background: The prevalence of head and neck cancer (HNC) is increasing rapidly, and the prognosis is poor in the advance stage. For the patient suffering from advance stage HNC, the improvement in quality of life and decrease mortality remain as the mainstay of treatment. The aim was to assess the change in quality-adjusted life-years (QALYs) in recurrent or metastatic HNC patients receiving cetuximab plus cisplatin and cetuximab plus cisplatin-paclitaxel.

Methods: It was a single-centric prospective-observational study. Patients were divided into two cohorts based on the chemotherapy regimens they were prescribed. Patients in cohort 1 were prescribed with cetuximab and cisplatin and in cohort 2 were prescribed with cetuximab, cisplatin, and paclitaxel. The QALYs were the primary outcome of the study, and it was calculated using EQ-5D-5L instrument. Patients were followed until the completion of the therapy, i.e., six chemotherapy cycles. The statistical analysis was carried out using SPSS for descriptive and inferential analysis.

Results: Amongst 175 patients screened, 100 patients were enrolled which further distributed in cohorts 1 and 2 equally. The mean QALYs were 0.016 and 0.017 at the time of diagnosis, i.e., before initiation of chemotherapy for patients in cohorts 1 and 2, respectively. At every chemotherapy cycle, the QALYs were calculated. After the completion of six chemotherapy cycles, the mean QALYs were 0.029 and 0.032 for patients in cohorts 1 and 2, respectively.

Conclusion: The three-drug therapy consisting of cetuximab, cisplatin, and paclitaxel has shown significant improvement in patients' QALYs compared to two-drug regimens of cetuximab and cisplatin. Thus, if the therapy consisted of three-drug regimen is used instead of two-drug regimen, it will have a positive impact on humanistic outcome in recurrent or metastatic HNC patients.

背景:头颈癌(HNC)的发病率迅速上升,且在晚期预后较差。对于晚期HNC患者,改善生活质量和降低死亡率仍然是治疗的主要内容。目的是评估接受西妥昔单抗联合顺铂和西妥昔单抗联合顺铂-紫杉醇治疗的复发或转移性HNC患者的质量调整生命年(QALYs)的变化。方法:该研究为单中心前瞻性观察性研究。患者根据所开的化疗方案被分为两组。队列1的患者使用西妥昔单抗和顺铂,队列2的患者使用西妥昔单抗、顺铂和紫杉醇。QALYs是研究的主要结果,使用EQ-5D-5L仪器计算。随访患者直至治疗完成,即6个化疗周期。统计分析采用SPSS进行描述性和推断性分析。结果:在筛选的175例患者中,有100例患者入组,进一步平均分布在队列1和2中。队列1和队列2患者在诊断时(即开始化疗前)的平均QALYs分别为0.016和0.017。在每个化疗周期,计算QALYs。6个化疗周期完成后,队列1和队列2患者的平均QALYs分别为0.029和0.032。结论:西妥昔单抗、顺铂、紫杉醇三联用药方案较西妥昔单抗、顺铂双药方案对患者QALYs有显著改善。因此,如果使用由三药方案组成的治疗方案而不是两药方案,将对复发或转移性HNC患者的人文预后产生积极影响。
{"title":"Impact of cetuximab plus cisplatin alone and cetuximab plus cisplatin and paclitaxel regimen on humanistic outcome in head and neck cancer.","authors":"Avinash Khadela,&nbsp;Bhavin Vyas,&nbsp;Mustakim Mansuri,&nbsp;Dipen Sureja,&nbsp;Kunjan Bodiwala","doi":"10.1186/s43046-023-00160-9","DOIUrl":"https://doi.org/10.1186/s43046-023-00160-9","url":null,"abstract":"<p><strong>Background: </strong>The prevalence of head and neck cancer (HNC) is increasing rapidly, and the prognosis is poor in the advance stage. For the patient suffering from advance stage HNC, the improvement in quality of life and decrease mortality remain as the mainstay of treatment. The aim was to assess the change in quality-adjusted life-years (QALYs) in recurrent or metastatic HNC patients receiving cetuximab plus cisplatin and cetuximab plus cisplatin-paclitaxel.</p><p><strong>Methods: </strong>It was a single-centric prospective-observational study. Patients were divided into two cohorts based on the chemotherapy regimens they were prescribed. Patients in cohort 1 were prescribed with cetuximab and cisplatin and in cohort 2 were prescribed with cetuximab, cisplatin, and paclitaxel. The QALYs were the primary outcome of the study, and it was calculated using EQ-5D-5L instrument. Patients were followed until the completion of the therapy, i.e., six chemotherapy cycles. The statistical analysis was carried out using SPSS for descriptive and inferential analysis.</p><p><strong>Results: </strong>Amongst 175 patients screened, 100 patients were enrolled which further distributed in cohorts 1 and 2 equally. The mean QALYs were 0.016 and 0.017 at the time of diagnosis, i.e., before initiation of chemotherapy for patients in cohorts 1 and 2, respectively. At every chemotherapy cycle, the QALYs were calculated. After the completion of six chemotherapy cycles, the mean QALYs were 0.029 and 0.032 for patients in cohorts 1 and 2, respectively.</p><p><strong>Conclusion: </strong>The three-drug therapy consisting of cetuximab, cisplatin, and paclitaxel has shown significant improvement in patients' QALYs compared to two-drug regimens of cetuximab and cisplatin. Thus, if the therapy consisted of three-drug regimen is used instead of two-drug regimen, it will have a positive impact on humanistic outcome in recurrent or metastatic HNC patients.</p>","PeriodicalId":17301,"journal":{"name":"Journal of the Egyptian National Cancer Institute","volume":"35 1","pages":"1"},"PeriodicalIF":1.8,"publicationDate":"2023-01-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10613425","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 1
Combination of chemotherapeutic agents and biological response modifiers (immunotherapy) in triple-negative/Her2( +) breast cancer, multiple myeloma, and non-small-cell lung cancer. 化疗药物和生物反应调节剂(免疫疗法)联合治疗三阴性/Her2(+)乳腺癌、多发性骨髓瘤和非小细胞肺癌。
IF 1.8 Q3 ONCOLOGY Pub Date : 2023-01-02 DOI: 10.1186/s43046-022-00159-8
William Morse, Haroon Nawaz, Ayesha A Choudhry

Hypothesis: Biological response modifiers (immunotherapy) in combination to chemotherapy are superior to that of chemotherapy in treatment of breast cancer (triple-negative/HER-2 ( +)), multiple myeloma, and non-small-cell lung cancer.

Methods: This review article consists of a total of eighteen independent randomized controlled clinical trials ranging from phases one to three. Patients were randomly selected for immunomodulatory treatment or chemotherapy and assessed for a specific mutation expression that the immunomodulatory agent targets. Kaplan-Meier plots, swimmer plots, and bar graphs depict overall/progression-free survival, objective response, and clinical response rates. The data collected was assessed by using 95% confidence interval and a p value of 0.05. Patients were treated until disease progression.

Results: Biological response modifiers (immunotherapy) resulted in significantly longer median progression-free survival in PD-L1-positive breast cancer (7.5 months compared to 5.0 months in control group), multiple myeloma (60.7% compared to 26.9% in the daratumumab and placebo groups, respectively), and in non-small-cell lung cancer (median progression-free survival was 10.3 months in the pembrolizumab group compared to 6.0 months in the chemotherapy group): higher complete responses in multiple myeloma (79% and 66% in the elotuzumab and control groups, respectively) and lower disease progression in PD-L1-positive non-small-cell lung cancer (62.1% of pembrolizumab versus 50.3% of chemotherapy patients had no disease progression at 6 months).

Conclusion: Combination biological response modifiers (immunotherapy) and chemotherapy displayed benefit in overall/progression-free survival, response rate, duration of response, clinical benefit, and invasive disease-free survival in triple-negative/HER2-2( +) breast cancer, multiple myeloma, and non-small-cell lung cancer.

假设:生物反应调节剂(免疫疗法)联合化疗治疗乳腺癌(三阴性/HER-2(+))、多发性骨髓瘤和非小细胞肺癌优于化疗。方法:这篇综述文章包括18个独立的随机对照临床试验,从一期到三期。随机选择患者进行免疫调节治疗或化疗,并评估免疫调节剂靶向的特定突变表达。Kaplan-Meier图、swimmer图和柱状图描述了总体/无进展生存期、客观反应和临床反应率。收集的资料采用95%置信区间和p值0.05进行评估。患者接受治疗直至疾病进展。结果:生物反应修饰剂(免疫治疗)显著延长了pd - l1阳性乳腺癌(7.5个月,对照组5.0个月)、多发性骨髓瘤(60.7%,达拉单抗组26.9%,安慰剂组分别)和非小细胞肺癌(派姆单抗组中位无进展生存期为10.3个月,化疗组为6.0个月)的中位无进展生存期。多发性骨髓瘤患者的完全缓解率更高(elotuzumab组和对照组分别为79%和66%),pd - l1阳性非小细胞肺癌患者的疾病进展率更低(62.1%的派姆单抗和50.3%的化疗患者在6个月时没有疾病进展)。结论:联合生物反应修饰剂(免疫治疗)和化疗在三阴性/HER2-2(+)乳腺癌、多发性骨髓瘤和非小细胞肺癌的总/无进展生存期、反应率、反应持续时间、临床获益和侵袭性无病生存期均有益处。
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引用次数: 2
Identification of significant genes associated with prognosis of gastric cancer by bioinformatics analysis. 生物信息学分析与胃癌预后相关的重要基因鉴定。
IF 1.8 Q3 ONCOLOGY Pub Date : 2022-12-26 DOI: 10.1186/s43046-022-00157-w
Shuanhu Wang, Song Tao, Yakui Liu, Yi Shi, Mulin Liu

Background: Gastric cancer (GC) ranks second in mortality among all malignant diseases worldwide. However, the cause and molecular mechanism underlying gastric cancer are not clear. Here, we used integrated bioinformatics to identify possible key genes and reveal the pathogenesis and prognosis of gastric cancer.

Methods: The gene expression profiles of GSE118916, GSE79973, and GSE29272 were available from the Gene Expression Omnibus (GEO) database. Differentially expressed genes (DEGs) between GC and normal gastric tissues were screened by R software and Venn diagram software. GO and KEGG pathway enrichment of DEGs was performed using the DAVID database. A protein-protein interaction (PPI) network was established by STRING and visualized using Cytoscape software. Then the influence of hub genes on expression and survival was assessed using TCGA database.

Results: A total of 83 DEGs were found in the three datasets, including 41 up-regulated genes and 42 down-regulated genes. These DEGs were mainly enriched in extracellular matrix organization and cell adhesion. The enriched pathways obtained in the KEGG pathway analysis were extracellular matrix (ECM)-receptor interaction and focal adhesion. A PPI network of DEGs was analyzed using the Molecular Complex Detection (MCODE) app of Cytoscape. Four genes were considered hub genes, including COL5A1, FBN1, SPARC, and LUM. Among them, LUM was found to have a significantly worse prognosis based on TCGA database.

Conclusions: We screened DEGs associated with GC by integrated bioinformatics analysis and found one potential biomarker that may be involved in the progress of GC. This hub gene may serve as a guide for further molecular biological experiments.

背景:胃癌在全球恶性疾病中死亡率居第二位。然而,胃癌的病因和分子机制尚不清楚。在此,我们利用综合生物信息学方法鉴定可能的关键基因,揭示胃癌的发病机制和预后。方法:从gene expression Omnibus (GEO)数据库中获取GSE118916、GSE79973和GSE29272的基因表达谱。采用R软件和维恩图软件筛选胃癌组织与正常胃组织的差异表达基因(DEGs)。使用DAVID数据库对DEGs进行GO和KEGG途径富集。利用STRING建立蛋白相互作用(PPI)网络,并利用Cytoscape软件进行可视化。然后使用TCGA数据库评估枢纽基因对表达和生存的影响。结果:三个数据集中共发现83个deg,其中上调基因41个,下调基因42个。这些deg主要富集于细胞外基质组织和细胞粘附。KEGG途径分析中得到的富集途径是细胞外基质(ECM)-受体相互作用和局灶黏附。使用Cytoscape的分子复合物检测(MCODE)应用程序分析了DEGs的PPI网络。四个基因被认为是枢纽基因,包括COL5A1、FBN1、SPARC和LUM。其中,根据TCGA数据库发现LUM的预后明显较差。结论:我们通过综合生物信息学分析筛选了与GC相关的deg,并发现了一个可能参与GC进展的潜在生物标志物。该枢纽基因可作为进一步分子生物学实验的指导。
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引用次数: 0
Primary therapy of early breast cancer: Egyptian view of 2021 St. Gallen consensus. 早期乳腺癌的主要治疗:埃及对2021年圣加仑共识的看法。
IF 1.8 Q3 ONCOLOGY Pub Date : 2022-12-26 DOI: 10.1186/s43046-022-00156-x
Hussein Khaled, Yousry Wasef Nada, Kareem Mohamed Ramadan, Shawkat Fekry, Mohamed Samy Seleam, Rabab Gaafar, Mohamed Lotayef

Purpose: The theme of the St. Gallen International Breast Cancer Conference 2021 held virtually for the first time, due to the COVID-19 pandemic, was on tailoring therapies for patients with early breast cancer. A monkey survey that included an Egyptian Panel voted on most of the questions of the original St. Gallen consensus, and some added new questions most relevant to oncology practice in the country, to be able to compare voting results that reflect differences in breast cancer management and decision making.

Methods: The panel included 74 Egyptian scientists from different oncology specialties. Management issues including controversial diagnostic and therapeutic interventions were prepared by a small committee and then projected using the online monkey survey website: https://www.surveymonkey.com . The survey included 130 questions. Results were then analyzed, tabulated, and compared to the voting results of the original St. Gallen consensus.

Results and conclusions: Voting questions and resulting percentages of answers from the Egyptian panel were summarized. There was no consensus between the Egyptian and the original St. Gallen panels on 28/130 statements. They mostly included genetic and pathologic aspects, specifically the routine use of gene signature assays and a few queries involving surgical, radiotherapeutic, and systemic interventions. Probably, available resources and healthcare system differences in Egypt compared to European and the USA were the cause of these differences. This would also be applicable to other low- and low-middle-income healthcare scenarios present in many countries, especially with the present constraints of the COVID-19 pandemic.

目的:由于COVID-19大流行,圣加仑国际乳腺癌会议2021首次以虚拟方式举行,主题是针对早期乳腺癌患者的量身定制治疗。一项猴子调查,包括一个埃及小组,对最初圣加仑共识的大多数问题进行了投票,并增加了一些与该国肿瘤实践最相关的新问题,以便能够比较反映乳腺癌管理和决策差异的投票结果。方法:专家组包括来自不同肿瘤学专业的74名埃及科学家。管理问题,包括有争议的诊断和治疗干预,是由一个小委员会准备的,然后通过在线猴子调查网站https://www.surveymonkey.com进行预测。调查包括130个问题。然后对结果进行分析、制表,并与最初的圣加仑共识投票结果进行比较。结果和结论:投票问题和结果百分比的回答从埃及小组总结。埃及小组和最初的圣加仑小组对28/130声明没有达成一致意见。它们主要包括遗传和病理方面,特别是常规使用的基因标记分析和一些涉及手术、放射治疗和系统干预的查询。可能,与欧洲和美国相比,埃及的可用资源和医疗系统差异是造成这些差异的原因。这也适用于许多国家存在的其他低收入和中低收入医疗保健方案,特别是在当前COVID-19大流行的限制下。
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引用次数: 0
Predictors of peritoneal metastasis of gastric origin. 胃源性腹膜转移的预测因素。
IF 1.8 Q3 ONCOLOGY Pub Date : 2022-12-19 DOI: 10.1186/s43046-022-00155-y
Mohamed Atef ElKordy, Rady Mansour Soliman, Mahitab Ibrahim ElTohamy, Dalia Negm Eldin Mohamed, Ahmed Morsi Mustafa

Background: Gastric adenocarcinoma is one of the most aggressive forms of cancer. Despite marked advancements in radiological techniques, peritoneal deposits are still only discovered during laparotomies in a significant number of cases. The role of surgery in the management of metastatic gastric cancer is very limited, reducing the value of conducting laparotomies. In addition, conducting laparoscopies for the purposes of properly staging every case of gastric cancer is difficult, especially in healthcare systems with limited resources. It is thus crucial to investigate all possible predictors of peritoneal metastasis of gastric cancer, with the aim of reserving the use of laparoscopies to cases known to have high incidences of peritoneal metastasis despite negative radiological results.

Patients and methods: This is a case control study that included all cases of gastric adenocarcinoma that had presented to the National Cancer Institute-Cairo University between January 2018 and December 2019. The 'cases' group encompassed all gastric adenocarcinoma patients who were found to have peritoneal metastasis, whilst the 'control' group included those patients who were apparently metastasis-free. Comparisons were made between the two groups in terms of demographics, tumor characteristics, and results of laboratory tumor marker investigations.

Results: Patients with peritoneal metastasis were statistically significantly younger than those who had no apparent metastasis (mean ± SD 51.4 ± 12.5 and 56.2 ± 12.6 respectively; P = 0.020). Significant associations were found between a finding of peritoneal metastasis and (i) a middle tumor site (P = 0.002); (ii) tumor thickening morphology (P < 0.001); (iii) undifferentiated histopathology (P = 0.040); (iv) tumor grade III (P < 0.001); (v) lower lymphocyte counts of < 1.9/ml (P = 0.030); and (vi) high levels of CA 19-9 of > 37 units/ml (P = 0.032).

Conclusion: Tumor pathological criteria, including tumor site, degree of differentiation, shape, and grading, as well as laboratory findings of low lymphocytic counts and high levels of CA 19-9 appear to be reliable predictors of the presence of peritoneal metastasis from a gastric adenocarcinoma.

背景:胃腺癌是最具侵袭性的癌症之一。尽管放射学技术有了显著的进步,腹膜沉积物仍然只有在剖腹手术中才能被发现。手术在转移性胃癌治疗中的作用非常有限,降低了进行剖腹手术的价值。此外,在资源有限的医疗系统中,为每个胃癌病例进行适当分期的腹腔镜检查是困难的。因此,研究胃癌腹膜转移的所有可能的预测因素是至关重要的,目的是保留对已知腹膜转移发生率高但放射学结果阴性的病例使用腹腔镜。患者和方法:这是一项病例对照研究,包括2018年1月至2019年12月期间提交给开罗大学国家癌症研究所的所有胃腺癌病例。“病例”组包括所有发现有腹膜转移的胃腺癌患者,而“对照组”包括那些明显没有转移的患者。比较两组在人口统计学、肿瘤特征和实验室肿瘤标志物调查结果方面的差异。结果:有腹膜转移的患者比无明显转移的患者年轻(平均±SD分别为51.4±12.5和56.2±12.6),具有统计学意义;P = 0.020)。发现腹膜转移与(1)中间肿瘤部位之间存在显著关联(P = 0.002);(ii)肿瘤增厚形态(P < 0.001);(iii)未分化组织病理学(P = 0.040);(iv) III级肿瘤(P < 0.001);(v)淋巴细胞计数< 1.9/ml (P = 0.030);(vi) CA 19-9水平> 37单位/ml (P = 0.032)。结论:肿瘤病理标准,包括肿瘤部位、分化程度、形状和分级,以及低淋巴细胞计数和高水平CA 19-9的实验室结果似乎是胃腺癌腹膜转移的可靠预测因素。
{"title":"Predictors of peritoneal metastasis of gastric origin.","authors":"Mohamed Atef ElKordy,&nbsp;Rady Mansour Soliman,&nbsp;Mahitab Ibrahim ElTohamy,&nbsp;Dalia Negm Eldin Mohamed,&nbsp;Ahmed Morsi Mustafa","doi":"10.1186/s43046-022-00155-y","DOIUrl":"https://doi.org/10.1186/s43046-022-00155-y","url":null,"abstract":"<p><strong>Background: </strong>Gastric adenocarcinoma is one of the most aggressive forms of cancer. Despite marked advancements in radiological techniques, peritoneal deposits are still only discovered during laparotomies in a significant number of cases. The role of surgery in the management of metastatic gastric cancer is very limited, reducing the value of conducting laparotomies. In addition, conducting laparoscopies for the purposes of properly staging every case of gastric cancer is difficult, especially in healthcare systems with limited resources. It is thus crucial to investigate all possible predictors of peritoneal metastasis of gastric cancer, with the aim of reserving the use of laparoscopies to cases known to have high incidences of peritoneal metastasis despite negative radiological results.</p><p><strong>Patients and methods: </strong>This is a case control study that included all cases of gastric adenocarcinoma that had presented to the National Cancer Institute-Cairo University between January 2018 and December 2019. The 'cases' group encompassed all gastric adenocarcinoma patients who were found to have peritoneal metastasis, whilst the 'control' group included those patients who were apparently metastasis-free. Comparisons were made between the two groups in terms of demographics, tumor characteristics, and results of laboratory tumor marker investigations.</p><p><strong>Results: </strong>Patients with peritoneal metastasis were statistically significantly younger than those who had no apparent metastasis (mean ± SD 51.4 ± 12.5 and 56.2 ± 12.6 respectively; P = 0.020). Significant associations were found between a finding of peritoneal metastasis and (i) a middle tumor site (P = 0.002); (ii) tumor thickening morphology (P < 0.001); (iii) undifferentiated histopathology (P = 0.040); (iv) tumor grade III (P < 0.001); (v) lower lymphocyte counts of < 1.9/ml (P = 0.030); and (vi) high levels of CA 19-9 of > 37 units/ml (P = 0.032).</p><p><strong>Conclusion: </strong>Tumor pathological criteria, including tumor site, degree of differentiation, shape, and grading, as well as laboratory findings of low lymphocytic counts and high levels of CA 19-9 appear to be reliable predictors of the presence of peritoneal metastasis from a gastric adenocarcinoma.</p>","PeriodicalId":17301,"journal":{"name":"Journal of the Egyptian National Cancer Institute","volume":"34 1","pages":"53"},"PeriodicalIF":1.8,"publicationDate":"2022-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10374431","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Six potential biomarkers for bladder cancer: key proteins in cell-cycle division and apoptosis pathways. 膀胱癌的六个潜在生物标志物:细胞周期分裂和凋亡途径的关键蛋白。
IF 1.8 Q3 ONCOLOGY Pub Date : 2022-12-19 DOI: 10.1186/s43046-022-00153-0
Güldal Inal Gültekin, Özlem Timirci Kahraman, Murat Işbilen, Saliha Durmuş, Tunahan Çakir, İlhan Yaylim, Turgay Isbir

Background: The bladder cancer (BC) pathology is caused by both exogenous environmental and endogenous molecular factors. Several genes have been implicated, but the molecular pathogenesis of BC and its subtypes remains debatable. The bioinformatic analysis evaluates high numbers of proteins in a single study, increasing the opportunity to identify possible biomarkers for disorders.

Methods: The aim of this study is to identify biomarkers for the identification of BC using several bioinformatic analytical tools and methods. BC and normal samples were compared for each probeset with T test in GSE13507 and GSE37817 datasets, and statistical probesets were verified with GSE52519 and E-MTAB-1940 datasets. Differential gene expression, hierarchical clustering, gene ontology enrichment analysis, and heuristic online phenotype prediction algorithm methods were utilized. Statistically significant proteins were assessed in the Human Protein Atlas database. GSE13507 (6271 probesets) and GSE37817 (3267 probesets) data were significant after the extraction of probesets without gene annotation information. Common probesets in both datasets (2888) were further narrowed by analyzing the first 100 upregulated and downregulated probesets in BC samples.

Results: Among the total 400 probesets, 68 were significant for both datasets with similar fold-change values (Pearson r: 0.995). Protein-protein interaction networks demonstrated strong interactions between CCNB1, BUB1B, and AURKB. The HPA database revealed similar protein expression levels for CKAP2L, AURKB, APIP, and LGALS3 both for BC and control samples.

Conclusion: This study disclosed six candidate biomarkers for the early diagnosis of BC. It is suggested that these candidate proteins be investigated in a wet lab to identify their functions in BC pathology and possible treatment approaches.

背景:膀胱癌的病理是由外源性环境因素和内源性分子因素共同引起的。一些基因已被牵连,但BC及其亚型的分子发病机制仍有争议。生物信息学分析在一项研究中评估了大量蛋白质,增加了识别疾病可能的生物标志物的机会。方法:本研究的目的是利用几种生物信息学分析工具和方法鉴定BC的生物标志物。在GSE13507和GSE37817数据集中对BC和正常样本的每个问题集进行T检验比较,并在GSE52519和E-MTAB-1940数据集中对统计问题集进行验证。采用差异基因表达、层次聚类、基因本体富集分析和启发式在线表型预测算法等方法。在Human Protein Atlas数据库中评估具有统计学意义的蛋白质。GSE13507 (6271 probesets)和GSE37817 (3267 probesets)的数据在提取不含基因注释信息的probesets后显著。通过分析BC样本中前100个上调和下调的问题集,进一步缩小了两个数据集中(2888个)的共同问题集。结果:在400个问题集中,68个问题集对两个数据集具有相似的fold-change值(Pearson r: 0.995)。蛋白质-蛋白质相互作用网络显示CCNB1、BUB1B和AURKB之间有很强的相互作用。HPA数据库显示,BC和对照样本中CKAP2L、AURKB、APIP和LGALS3的蛋白表达水平相似。结论:本研究揭示了BC早期诊断的六个候选生物标志物。建议在湿实验室中研究这些候选蛋白,以确定它们在BC病理中的功能和可能的治疗方法。
{"title":"Six potential biomarkers for bladder cancer: key proteins in cell-cycle division and apoptosis pathways.","authors":"Güldal Inal Gültekin,&nbsp;Özlem Timirci Kahraman,&nbsp;Murat Işbilen,&nbsp;Saliha Durmuş,&nbsp;Tunahan Çakir,&nbsp;İlhan Yaylim,&nbsp;Turgay Isbir","doi":"10.1186/s43046-022-00153-0","DOIUrl":"https://doi.org/10.1186/s43046-022-00153-0","url":null,"abstract":"<p><strong>Background: </strong>The bladder cancer (BC) pathology is caused by both exogenous environmental and endogenous molecular factors. Several genes have been implicated, but the molecular pathogenesis of BC and its subtypes remains debatable. The bioinformatic analysis evaluates high numbers of proteins in a single study, increasing the opportunity to identify possible biomarkers for disorders.</p><p><strong>Methods: </strong>The aim of this study is to identify biomarkers for the identification of BC using several bioinformatic analytical tools and methods. BC and normal samples were compared for each probeset with T test in GSE13507 and GSE37817 datasets, and statistical probesets were verified with GSE52519 and E-MTAB-1940 datasets. Differential gene expression, hierarchical clustering, gene ontology enrichment analysis, and heuristic online phenotype prediction algorithm methods were utilized. Statistically significant proteins were assessed in the Human Protein Atlas database. GSE13507 (6271 probesets) and GSE37817 (3267 probesets) data were significant after the extraction of probesets without gene annotation information. Common probesets in both datasets (2888) were further narrowed by analyzing the first 100 upregulated and downregulated probesets in BC samples.</p><p><strong>Results: </strong>Among the total 400 probesets, 68 were significant for both datasets with similar fold-change values (Pearson r: 0.995). Protein-protein interaction networks demonstrated strong interactions between CCNB1, BUB1B, and AURKB. The HPA database revealed similar protein expression levels for CKAP2L, AURKB, APIP, and LGALS3 both for BC and control samples.</p><p><strong>Conclusion: </strong>This study disclosed six candidate biomarkers for the early diagnosis of BC. It is suggested that these candidate proteins be investigated in a wet lab to identify their functions in BC pathology and possible treatment approaches.</p>","PeriodicalId":17301,"journal":{"name":"Journal of the Egyptian National Cancer Institute","volume":"34 1","pages":"54"},"PeriodicalIF":1.8,"publicationDate":"2022-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9760318/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"10403897","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":0,"RegionCategory":"","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
期刊
Journal of the Egyptian National Cancer Institute
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