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Host-microbe interaction networks revealed through gut microbiota and microRNA correlation analysis in mouse models of chronic colitis and colitis-associated cancer. 通过肠道菌群和microRNA相关性分析揭示慢性结肠炎和结肠炎相关癌症小鼠模型中的宿主-微生物相互作用网络
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-09 DOI: 10.1186/s12967-026-07802-1
Jae Gon Lee, In Ho Kang, A-Reum Lee, Eun Hye Oh, Chan Hyuk Park, Dong Soo Han, Chang Soo Eun
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引用次数: 0
Molecular residual disease assessment in colorectal and bladder cancer by somatic structural variant analysis of cell-free DNA whole-genome sequencing data. 无细胞DNA全基因组测序数据的体细胞结构变异分析评估结直肠癌和膀胱癌的分子残留疾病。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-09 DOI: 10.1186/s12967-026-07762-6
Ester Ellegaard Sørensen, Amanda Frydendahl, Mads Heilskov Rasmussen, Iver Nordentoft, Michael Knudsen, Tenna Vesterman Henriksen, Sia Viborg Lindskrog, Lars Dyrskjøt, Claus Lindbjerg Andersen, Jesper Bertram Bramsen
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引用次数: 0
Tissue nonspecific and intestinal alkaline phosphatase crosstalk: a missing link in hypophosphatasia pathophysiology? 组织非特异性和肠道碱性磷酸酶串音:低磷酸症病理生理的缺失环节?
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-08 DOI: 10.1186/s12967-026-07791-1
Luis Martínez-Heredia, Trinidad González-Cejudo, María Carmen Andreo-López, Victoria Contreras-Bolívar, Cristina García-Fontana, Beatriz García-Fontana, Manuel Muñoz-Torres

Background: Tissue-nonspecific alkaline phosphatase (TNSALP) and intestinal alkaline phosphatase (IAP) are functionally similar enzymes, but their relationship in hypophosphatasia (HPP) remains unexplored. This study investigated the impact of HPP-a condition caused by ALPL gene mutations that impair TNSALP function-on serum and fecal IAP activity.

Methods: Total alkaline phosphatase (ALP) activity and isoenzyme-specific activities (using selective inhibitors: L-homoarginine for TNSALP, L-phenylalanine for IAP) were measured in serum and stool samples from 30 HPP patients and 30 matched healthy controls, alongside biochemical parameters correlations.

Results: In serum, IAP activity showed a non-significant decrease in HPP patients compared to controls, while TNSALP and total ALP activity were reduced in HPP patients. In stools, both total ALP and IAP activities were significantly decreased compared to the control group. Multivariate linear regression revealed a strong positive association between TNSALP and IAP in both serum and feces, independent of age and sex. In serum, TNSALP and IAP were key predictors of total ALP activity (B = 0.876 and B = 0.745, respectively; p < 0.001; R² = 0.9396), with TNSALP also predicting serum IAP levels (B = 0.164; p < 0.001). In feces, IAP was the strongest predictor of total ALP activity (B = 0.921; p < 0.001), and fecal TNSALP strongly predicted IAP levels (B = 0.883; p < 0.001). Serum TNSALP activity correlated with bone metabolism markers, inflammation, underscoring its potential systemic role.

Conclusions: IAP does not seem to compensate for reduced TNSALP activity in HPP. Instead, their tight association suggests a coordinated regulation between the two isoenzymes, with diminished fecal IAP potentially contributing to gut inflammation in HPP. These findings clarify the interplay between TNSALP and IAP and their clinical implications.

背景:组织非特异性碱性磷酸酶(TNSALP)和肠道碱性磷酸酶(IAP)是功能相似的酶,但它们在低磷酸症(HPP)中的关系尚不清楚。本研究探讨了hpp(一种由ALPL基因突变引起的损害TNSALP功能的疾病)对血清和粪便IAP活性的影响。方法:测量30例HPP患者和30例健康对照者的血清和粪便样本中的总碱性磷酸酶(ALP)活性和同工酶特异性活性(使用选择性抑制剂:l -同精氨酸抑制TNSALP, l -苯丙氨酸抑制IAP),以及生化参数的相关性。结果:在血清中,HPP患者的IAP活性与对照组相比无明显下降,而TNSALP和总ALP活性在HPP患者中降低。在粪便中,与对照组相比,总ALP和IAP活性均显著降低。多元线性回归显示血清和粪便中TNSALP与IAP呈正相关,与年龄和性别无关。在血清中,TNSALP和IAP是总ALP活性的关键预测因子(B = 0.876和B = 0.745); p结论:IAP似乎不能补偿HPP中TNSALP活性的降低。相反,它们之间的紧密联系表明两种同工酶之间存在协调调节,粪便IAP减少可能会导致HPP患者的肠道炎症。这些发现阐明了TNSALP和IAP之间的相互作用及其临床意义。
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引用次数: 0
Spatial resolution of the metastatic osteosarcoma tumor microenvironment using immunolabeling across murine, canine and human lung. 利用免疫标记在小鼠、犬和人肺中转移性骨肉瘤肿瘤微环境的空间分辨率。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-025-07367-5
Beck J A, J S Pereira, K I Silver, McGee L E, N Von Muhlinen, Rissi D R, Butcher D O, Edmondson E F, C Mazcko, LeBlanc A K
{"title":"Spatial resolution of the metastatic osteosarcoma tumor microenvironment using immunolabeling across murine, canine and human lung.","authors":"Beck J A, J S Pereira, K I Silver, McGee L E, N Von Muhlinen, Rissi D R, Butcher D O, Edmondson E F, C Mazcko, LeBlanc A K","doi":"10.1186/s12967-025-07367-5","DOIUrl":"https://doi.org/10.1186/s12967-025-07367-5","url":null,"abstract":"","PeriodicalId":17458,"journal":{"name":"Journal of Translational Medicine","volume":" ","pages":""},"PeriodicalIF":7.5,"publicationDate":"2026-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146137556","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Magnesium silicate nanosheets enable sustained hydrogen release to attenuate secondary brain injury following intracerebral hemorrhage. 硅酸镁纳米片能够持续释放氢,以减轻脑出血后的继发性脑损伤。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-026-07755-5
Chang-Sheng Ma, Bo Han, Jia-Ru Guo, Jin-Fen Guo, Chang-Ku Shi, Yu-Xi Liu, Wen-Jing Yi, Li-Ying Zhang, Ai-Jun Deng, Ying-Shuai Wang, Mao-Tao He
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引用次数: 0
Emerging therapeutic pipelines on kidney fibrosis: challenges in translational research. 新兴的肾纤维化治疗管道:转化研究中的挑战。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-026-07796-w
Simona Granata, Laura Barberio, Rossana D'Agostino, Francesca Sorace, Francesca Leone, Daniela Pellegrino, Giovanni Stallone, Michele Provenzano, Gianluigi Zaza
{"title":"Emerging therapeutic pipelines on kidney fibrosis: challenges in translational research.","authors":"Simona Granata, Laura Barberio, Rossana D'Agostino, Francesca Sorace, Francesca Leone, Daniela Pellegrino, Giovanni Stallone, Michele Provenzano, Gianluigi Zaza","doi":"10.1186/s12967-026-07796-w","DOIUrl":"https://doi.org/10.1186/s12967-026-07796-w","url":null,"abstract":"","PeriodicalId":17458,"journal":{"name":"Journal of Translational Medicine","volume":" ","pages":""},"PeriodicalIF":7.5,"publicationDate":"2026-02-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146137566","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Overcoming therapeutic challenges in acute myeloid leukemia: active targeting strategies by nano-drug delivery systems. 克服急性髓性白血病的治疗挑战:纳米药物递送系统的主动靶向策略。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-026-07792-0
Yuqian Tang, Jiaxin Li, Wu Ye, Yiwen Du, Ying Zhang, Yunxia Ye, Yuping Gong
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引用次数: 0
Ex vivo long-term expansion of human hematopoietic stem and progenitor cells as a tool for modeling vector integration sites and clonality. 人类造血干细胞和祖细胞的体外长期扩增作为建模载体整合位点和克隆的工具。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-026-07700-6
Jenni Fleischauer, Philipp John-Neek, Teng-Cheong Ha, Friederike Mansel, Maike Kosanke, Anton Selich, Maike Hagedorn, Antonella Lucía Bastone, Maximilian Schinke, Violetta Dziadek, Oliver Dittrich-Breiholz, Constantin von Kaisenberg, Axel Schambach, Michael Rothe

Background: Gene therapy (GT) using retroviral vectors (RVs) is efficacious in treating monogenic diseases. However, there is an inherent risk for severe adverse effects due to insertional mutagenesis. Preclinical safety assessment and patient monitoring are inevitable in GT. To assess the genotoxic risk of novel RV vectors, mainly murine hematopoietic stem and progenitor cells (HPSCs) are routinely used, because human HSPCs cannot be immortalized in vitro using mutagenic vectors. In this study, we aim to identify early signs of clonal outgrowth by performing integration site analyses (ISA).

Methods: The small molecules A83-01, pomalidomide, and UM171 (APU) were used for the ex vivo expansion, lentiviral transduction, and long-term cultivation of umbilical cord blood-derived HSPCs. We determined the influence of APU on the stemness of HSPCs and their differentiation capacity via single-cell RNA sequencing (scRNA seq) and in xenotransplantation studies. To track vector insertion site dynamics, we transduced 7-day expanded HSPCs with a mutagenic or a safer RV. ISA was conducted in human HSPCs over a 5-week cultivation in vitro and compared to the bone marrow of xenotransplanted mice to assess clonal skewings.

Results: APU supported the expansion of CD34+CD38-CD45RA-CD90+EPCR+ HSPCs. scRNA seq confirmed the enrichment of HSC signature genes in APU-expanded HSPCs compared to the clinically used medium SFT3 (SCF, FLT3-L, TPO, IL-3). After RV transduction, APU still maintained around 30% of CD34+ cells for 5 more weeks. Without the compounds, already 2 weeks post-transduction, less than 10% of cells were CD34+. The long-term culture allowed the detection of high-risk integrations of the mutagenic SIN-LV.SF in MEIS1 or SUSD6 due to their increasing abundance over time. Bone marrow of xenotransplanted mice was less clonal but did not support the outgrowth of insertional mutants. Overall, APU increased clonal diversity.

Conclusions: Our findings propose that long-term cultivation of transduced HSPC in APU allows for outgrowth of clonal integration sites. The decrease of clonality has been observed in gene therapy patient's years after treatment. Thus, the in vitro model could be used to develop novel human HSPC-based genotoxicity assays that predict insertional mutagenesis, in addition to existing preclinical biosafety assays.

背景:利用逆转录病毒载体进行基因治疗是治疗单基因疾病的有效方法。然而,由于插入诱变,存在严重不良反应的固有风险。在GT中,临床前安全性评估和患者监测是不可避免的。为了评估新型RV载体的遗传毒性风险,通常主要使用小鼠造血干细胞和祖细胞(HPSCs),因为使用诱变载体不能在体外永生化人造血干细胞。在这项研究中,我们的目标是通过进行整合位点分析(ISA)来识别克隆外生的早期迹象。方法:采用小分子A83-01、泊马度胺、UM171 (APU)对脐血源性造血干细胞进行体外扩增、慢病毒转导和长期培养。我们通过单细胞RNA测序(scRNA seq)和异种移植研究确定了APU对HSPCs的干性及其分化能力的影响。为了跟踪载体插入位点的动态,我们用诱变或更安全的RV转导了7天扩增的HSPCs。ISA在体外培养5周的人造血干细胞中进行,并与异种移植小鼠的骨髓进行比较,以评估克隆倾斜。结果:APU支持CD34+CD38-CD45RA-CD90+EPCR+ HSPCs的扩增。scRNA测序证实,与临床使用的培养基SFT3相比,apu扩增的HSPCs中HSC特征基因(SCF、FLT3-L、TPO、IL-3)富集。RV转导后,APU仍维持约30%的CD34+细胞5周以上。没有这些化合物,在转导后2周,只有不到10%的细胞是CD34+。长期培养可以检测到致突变的SIN-LV的高风险整合。SF在MEIS1或SUSD6中,因为它们的丰度随着时间的推移而增加。异种移植小鼠的骨髓克隆性较低,但不支持插入突变体的生长。总体而言,APU增加了克隆多样性。结论:我们的研究结果表明,在APU中长期培养转导的HSPC可以促进克隆整合位点的生长。在基因治疗患者治疗后的数年中观察到克隆性的下降。因此,除了现有的临床前生物安全性分析外,体外模型可用于开发新的基于人类hspc的遗传毒性分析,以预测插入突变。
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引用次数: 0
First-year dynamics of the plasma virome and cytokine profile in infants born to mothers with syphilis. 梅毒母亲所生婴儿血浆病毒组和细胞因子谱的第一年动态。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-026-07827-6
Rongjing Dong, Youwang Lu, Jiarui Zheng, Yayun Zhuang, Yingying Ma, Le Cao, Yanpeng Li, Yakhouba Kane, Chiyu Zhang, Yu-Ye Li
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引用次数: 0
ALDH1L1 reverses CD8+ T cell exhaustion in the oral squamous cell carcinoma microenvironment by reprogramming L-glutamate metabolism. ALDH1L1通过重编程l -谷氨酸代谢逆转口腔鳞状细胞癌微环境中CD8+ T细胞耗竭。
IF 7.5 2区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL Pub Date : 2026-02-07 DOI: 10.1186/s12967-026-07812-z
Guanzheng Chen, Shuqi Zhao, Lin Zhu, Shifeng Wu, Jia Kang, Minghui Mao, Zhengxue Han, Yi Qu
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引用次数: 0
期刊
Journal of Translational Medicine
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