Amir Seginer, Alexander Bratch, Shahar Goren, Edna Furman-Haran, Noam Harel, Essa Yacoub, Rita Schmidt
Purpose: Echo-Planar Imaging (EPI) is central to fMRI, diffusion MRI, and many dynamic clinical applications, yet rapid gradient switching induces strong mechanical vibrations, generates acoustic noise, and contributes to ghosting artifacts-effects that intensify at ultra-high fields. This study aims to predict how subtle timing changes in multi-train EPI can modulate acoustic energy and reduce ghosting without altering reconstruction or acquisition design.
Methods: We derived an analytic model describing the interference between short gradient trains and combined it with the system's acoustic transfer function to predict the acoustic energy of a scan. The model predicts cyclic variations in acoustic power resulting from small timing adjustments of slices and echoes. Validation was performed on a clinical 7 T and an investigational 10.5 T MRI systems by measuring acoustic output and ghosting-artifact levels while systematically sweeping timing conditions in single and multi-echo EPI protocols.
Results: Sub-millisecond timing modifications produced large, predictable changes in the acoustic power; changes ranging from 2-fold to 47-fold. Intriguingly, under certain conditions, doubling the acquisitions per unit-time reduced the minimal acoustic energy two-fold. In addition, navigator time shifting reduced the ghosting-artifact intensity, up to 5-fold, exhibiting cyclic dependence corresponding to the dominant acoustic resonance frequency. These trends were consistent across both the 7 T and the 10.5 T systems.
Conclusion: Minimal timing adjustments provide an effective, reconstruction-agnostic strategy to reduce acoustic noise, to mitigate ghosting artifacts, and to expand feasible EPI parameters space. The proposed model paves the way towards quieter, higher-quality EPI scans, particularly valuable for ultra-high-field and high-speed imaging.
目的:回声平面成像(EPI)是功能磁共振成像(fMRI)、弥散磁共振成像(弥散MRI)和许多动态临床应用的核心,然而快速梯度切换会引起强烈的机械振动,产生噪音,并导致伪影——在超高场下加剧的效应。本研究旨在预测在不改变重建或采集设计的情况下,多列EPI中细微的时序变化如何调制声能并减少重影。方法:我们推导了一个描述短梯度序列之间干扰的解析模型,并将其与系统的声传递函数相结合来预测扫描的声能。该模型预测了由切片和回波的小定时调整引起的声功率的周期性变化。通过测量单回波和多回波EPI方案系统扫描时序条件时的声输出和伪影水平,在临床7t和研究性10.5 T MRI系统上进行验证。结果:亚毫秒级的时间调整产生了大的、可预测的声功率变化;变化幅度从2倍到47倍不等。有趣的是,在某些条件下,单位时间内的采集量增加一倍,最小声能减少两倍。此外,导航仪时移将伪影强度降低了5倍,表现出与主导声共振频率相对应的循环依赖性。这些趋势在7t和10.5 T系统中都是一致的。结论:最小的时间调整提供了一种有效的、与重建无关的策略来降低噪声,减轻重影伪影,并扩大可行的EPI参数空间。所提出的模型为更安静、更高质量的EPI扫描铺平了道路,对于超高场和高速成像尤其有价值。
{"title":"Timing Is Everything: How Subtle Timing Changes in MRI Echo Planar Imaging Can Significantly Alter Mechanical Vibrations and Sound Level.","authors":"Amir Seginer, Alexander Bratch, Shahar Goren, Edna Furman-Haran, Noam Harel, Essa Yacoub, Rita Schmidt","doi":"10.1002/mrm.70271","DOIUrl":"10.1002/mrm.70271","url":null,"abstract":"<p><strong>Purpose: </strong>Echo-Planar Imaging (EPI) is central to fMRI, diffusion MRI, and many dynamic clinical applications, yet rapid gradient switching induces strong mechanical vibrations, generates acoustic noise, and contributes to ghosting artifacts-effects that intensify at ultra-high fields. This study aims to predict how subtle timing changes in multi-train EPI can modulate acoustic energy and reduce ghosting without altering reconstruction or acquisition design.</p><p><strong>Methods: </strong>We derived an analytic model describing the interference between short gradient trains and combined it with the system's acoustic transfer function to predict the acoustic energy of a scan. The model predicts cyclic variations in acoustic power resulting from small timing adjustments of slices and echoes. Validation was performed on a clinical 7 T and an investigational 10.5 T MRI systems by measuring acoustic output and ghosting-artifact levels while systematically sweeping timing conditions in single and multi-echo EPI protocols.</p><p><strong>Results: </strong>Sub-millisecond timing modifications produced large, predictable changes in the acoustic power; changes ranging from 2-fold to 47-fold. Intriguingly, under certain conditions, doubling the acquisitions per unit-time reduced the minimal acoustic energy two-fold. In addition, navigator time shifting reduced the ghosting-artifact intensity, up to 5-fold, exhibiting cyclic dependence corresponding to the dominant acoustic resonance frequency. These trends were consistent across both the 7 T and the 10.5 T systems.</p><p><strong>Conclusion: </strong>Minimal timing adjustments provide an effective, reconstruction-agnostic strategy to reduce acoustic noise, to mitigate ghosting artifacts, and to expand feasible EPI parameters space. The proposed model paves the way towards quieter, higher-quality EPI scans, particularly valuable for ultra-high-field and high-speed imaging.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100041","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Purpose: To evaluate the feasibility of measuring gas exchange between the alveolar-capillary membrane and red blood cells (RBCs) using hyperpolarized 129Xe magnetic resonance, and to assess its potential for detecting disease-related changes in an animal model.
Methods: Experiments were performed on eight rats with bleomycin-induced pulmonary fibrosis and eight healthy controls. RBCs chemical shift saturation recovery (rCSSR) and equivalent chemical shift saturation recovery (eCSSR) sequences were developed to estimate the gas exchange time constants from alveoli to RBCs (TG-R) and from membrane to RBCs (TM-R). Group comparisons were performed, and correlations between rCSSR-derived parameters and pulmonary function tests (PFTs) and quantitative histology were also assessed. Statistical significance was defined as p < 0.05.
Results: TM-R and TG-R measured with rCSSR (denoted as TM-R-R and TG-R-R, respectively) were higher in the fibrosis group (8.74 ± 1.26 and 17.80 ± 3.08 ms, respectively) compared to controls (7.02 ± 0.58 and 13.89 ± 1.58 ms; p < 0.01). For the TM-R and TG-R derived from eCSSR (denoted as TM-R-E and TG-R-E, respectively), only TG-R-E showed a significant difference. Additionally, TM-R-R demonstrated strong correlations with forced vital capacity, quasi-static compliance from PFTs, and alveolar septal thickness measured by histology.
Conclusion: We proposed a 129Xe MR-based approach for quantifying gas exchange from the alveolar-capillary membrane to RBCs. This technique shows promise as a sensitive, non-invasive tool for detecting pulmonary gas exchange impairment.
{"title":"Assessment of Lung Microvasculature Alterations in Pulmonary Fibrosis With Hyperpolarized Xenon Magnetic Resonance.","authors":"Ming Zhang, Haidong Li, Hongchuang Li, Xiuchao Zhao, Xiaoling Liu, Yu Zheng, Yeqing Han, Chuan Qin, Xin Zhou","doi":"10.1002/mrm.70279","DOIUrl":"https://doi.org/10.1002/mrm.70279","url":null,"abstract":"<p><strong>Purpose: </strong>To evaluate the feasibility of measuring gas exchange between the alveolar-capillary membrane and red blood cells (RBCs) using hyperpolarized <sup>129</sup>Xe magnetic resonance, and to assess its potential for detecting disease-related changes in an animal model.</p><p><strong>Methods: </strong>Experiments were performed on eight rats with bleomycin-induced pulmonary fibrosis and eight healthy controls. RBCs chemical shift saturation recovery (rCSSR) and equivalent chemical shift saturation recovery (eCSSR) sequences were developed to estimate the gas exchange time constants from alveoli to RBCs (T<sub>G-R</sub>) and from membrane to RBCs (T<sub>M-R</sub>). Group comparisons were performed, and correlations between rCSSR-derived parameters and pulmonary function tests (PFTs) and quantitative histology were also assessed. Statistical significance was defined as p < 0.05.</p><p><strong>Results: </strong>T<sub>M-R</sub> and T<sub>G-R</sub> measured with rCSSR (denoted as T<sub>M-R-R</sub> and T<sub>G-R-R</sub>, respectively) were higher in the fibrosis group (8.74 ± 1.26 and 17.80 ± 3.08 ms, respectively) compared to controls (7.02 ± 0.58 and 13.89 ± 1.58 ms; p < 0.01). For the T<sub>M-R</sub> and T<sub>G-R</sub> derived from eCSSR (denoted as T<sub>M-R-E</sub> and T<sub>G-R-E</sub>, respectively), only T<sub>G-R-E</sub> showed a significant difference. Additionally, T<sub>M-R-R</sub> demonstrated strong correlations with forced vital capacity, quasi-static compliance from PFTs, and alveolar septal thickness measured by histology.</p><p><strong>Conclusion: </strong>We proposed a <sup>129</sup>Xe MR-based approach for quantifying gas exchange from the alveolar-capillary membrane to RBCs. This technique shows promise as a sensitive, non-invasive tool for detecting pulmonary gas exchange impairment.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100417","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Caroline A Doctor, Leonardo A Rivera-Rivera, Laura B Eisenmenger, Sterling C Johnson, Kevin M Johnson
<p><strong>Purpose: </strong>Applications of DENSE to measure cardiac driven brain tissue pulsations are highly sensitive to bulk patient motion due to the sub-millimeter displacement encoding required, limiting its accuracy, reproducibility, and use in pediatric and aging populations. This study aims to assess the impact of induced bulk motion on DENSE scans and to what extent these motion effects can be mitigated with existing and newly proposed methods.</p><p><strong>Methods: </strong>Participants (N = 10) underwent test-retest 2D DENSE scans at three slice locations with and without induced motion using a 3.0 T system. Brain displacement fields were calculated using pipelines without and with motion correction based on polynomial fitting to an outer ring of brain tissue. Subsequently, voxel-wise comparisons were made between scans and pipelines to evaluate scan repeatability and measure biases in displacement measures.</p><p><strong>Results: </strong>In comparing scans with and without induced motion, motion significantly impacted displacement measures, resulting in intensity variations and phase wrap artifacts, as well as increased the mean peak-to-peak displacements. Motion-correction removed the intensity variations and phase wrap observed in phase images, and reduced variations between scans taken with and without induced motion ( <math> <semantics> <mrow><msubsup><mi>R</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> <mn>2</mn></msubsup> </mrow> <annotation>$$ {R}_{mathrm{corr}.}^2 $$</annotation></semantics> </math> = 0.45 ± 0.29, <math> <semantics> <mrow><msubsup><mi>R</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> <mn>2</mn></msubsup> </mrow> <annotation>$$ {R}_{mathrm{corr}.}^2 $$</annotation></semantics> </math> = 0.96 ± 0.05; <math> <semantics> <mrow><msub><mtext>RMSD</mtext> <mrow><mtext>uncorr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {mathrm{RMSD}}_{mathrm{uncorr}.} $$</annotation></semantics> </math> = 0.089 ± 0.005 mm, <math> <semantics> <mrow><msub><mtext>RMSD</mtext> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {mathrm{RMSD}}_{mathrm{corr}.} $$</annotation></semantics> </math> = 0.00788 ± 0.00004 mm). Test-retest reproducibility increased after motion correction with induced motion ( <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>uncorr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {rho}_{mathrm{uncorr}.} $$</annotation></semantics> </math> = 0.46 ± 0.38, <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {rho}_{mathrm{corr}.} $$</annotation></semantics> </math> = 0.98 ± 0.01), and in the absence of induced motion ( <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>uncorr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {rho}_{mathrm{uncorr}.} $$</annotation></semantics> </math> = 0.76 ± 0.35, <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> </ms
{"title":"Effects and Correction of Patient Bulk Motion in Cranial DENSE MRI.","authors":"Caroline A Doctor, Leonardo A Rivera-Rivera, Laura B Eisenmenger, Sterling C Johnson, Kevin M Johnson","doi":"10.1002/mrm.70270","DOIUrl":"https://doi.org/10.1002/mrm.70270","url":null,"abstract":"<p><strong>Purpose: </strong>Applications of DENSE to measure cardiac driven brain tissue pulsations are highly sensitive to bulk patient motion due to the sub-millimeter displacement encoding required, limiting its accuracy, reproducibility, and use in pediatric and aging populations. This study aims to assess the impact of induced bulk motion on DENSE scans and to what extent these motion effects can be mitigated with existing and newly proposed methods.</p><p><strong>Methods: </strong>Participants (N = 10) underwent test-retest 2D DENSE scans at three slice locations with and without induced motion using a 3.0 T system. Brain displacement fields were calculated using pipelines without and with motion correction based on polynomial fitting to an outer ring of brain tissue. Subsequently, voxel-wise comparisons were made between scans and pipelines to evaluate scan repeatability and measure biases in displacement measures.</p><p><strong>Results: </strong>In comparing scans with and without induced motion, motion significantly impacted displacement measures, resulting in intensity variations and phase wrap artifacts, as well as increased the mean peak-to-peak displacements. Motion-correction removed the intensity variations and phase wrap observed in phase images, and reduced variations between scans taken with and without induced motion ( <math> <semantics> <mrow><msubsup><mi>R</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> <mn>2</mn></msubsup> </mrow> <annotation>$$ {R}_{mathrm{corr}.}^2 $$</annotation></semantics> </math> = 0.45 ± 0.29, <math> <semantics> <mrow><msubsup><mi>R</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> <mn>2</mn></msubsup> </mrow> <annotation>$$ {R}_{mathrm{corr}.}^2 $$</annotation></semantics> </math> = 0.96 ± 0.05; <math> <semantics> <mrow><msub><mtext>RMSD</mtext> <mrow><mtext>uncorr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {mathrm{RMSD}}_{mathrm{uncorr}.} $$</annotation></semantics> </math> = 0.089 ± 0.005 mm, <math> <semantics> <mrow><msub><mtext>RMSD</mtext> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {mathrm{RMSD}}_{mathrm{corr}.} $$</annotation></semantics> </math> = 0.00788 ± 0.00004 mm). Test-retest reproducibility increased after motion correction with induced motion ( <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>uncorr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {rho}_{mathrm{uncorr}.} $$</annotation></semantics> </math> = 0.46 ± 0.38, <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {rho}_{mathrm{corr}.} $$</annotation></semantics> </math> = 0.98 ± 0.01), and in the absence of induced motion ( <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>uncorr</mtext> <mo>.</mo></mrow> </msub> </mrow> <annotation>$$ {rho}_{mathrm{uncorr}.} $$</annotation></semantics> </math> = 0.76 ± 0.35, <math> <semantics> <mrow><msub><mi>ρ</mi> <mrow><mtext>corr</mtext> <mo>.</mo></mrow> </ms","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146099864","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Julia Stabinska, Thomas A Thiel, Hans-Jörg Wittsack, Alexandra Ljimani, Helge J Zöllner
Purpose: To quantitatively assess the bias in the intravoxel incoherent motions (IVIM)-derived pseudo-diffusion volume fraction (f) caused by the differences in relaxation times between the tissue and fluid compartments, and to develop a two-dimensional (b-value-TE) fitting approach for simultaneous T2 and IVIM parameter estimation along with an optimal acquisition protocol for the relaxation-compensated T2-IVIM imaging in the liver.
Methods: Simulations were conducted to investigate the TR- and TE-dependent bias in f when using the IVIM model, and to evaluate the applicability of the 2D T2-IVIM model for reducing this bias. The numerical findings were then validated using the in vivo IVIM data from four healthy volunteers on a 3-Tesla MRI scanner. Finally, a numerical framework for optimizing the T2-IVIM protocol for relaxation-compensated f parameter estimation was proposed and tested using the in vivo data.
Results: In vivo, the traditional IVIM model showed a trend toward higher f with increasing TE in the liver (R = 0.46, p = 0.023), but not in the kidney cortex (R = -0.067, p = 0.76) or medulla (R = 0.039, p = 0.86). In both simulations and in vivo, 2D T2-IVIM modeling yielded lower f values and reduced variability in the liver. Our results further suggest that a b-TE protocol with six b-values and three TEs (50, 60, and 100 ms) may be optimal for liver T2-IVIM.
Conclusion: The extended 2D T2-IVIM model effectively minimizes the TE-dependent bias in f and allows simultaneous estimation of the IVIM parameter and compartmental T2 values in abdominal organs.
目的:定量评估组织和液体室间松弛时间差异导致的体素内非相干运动(IVIM)衍生的伪扩散体积分数(f)的偏差,并开发一种二维(b值- te)拟合方法,用于同时估计T2和IVIM参数,以及肝脏松弛补偿T2-IVIM成像的最佳获取方案。方法:通过模拟研究使用IVIM模型时f的TR和te依赖偏差,并评估2D T2-IVIM模型在减少这种偏差方面的适用性。然后使用4名健康志愿者在3特斯拉MRI扫描仪上的体内IVIM数据验证了数值结果。最后,提出了一个优化松弛补偿f参数估计的T2-IVIM方案的数值框架,并使用体内数据进行了测试。结果:在体内,传统IVIM模型随着TE的增加,肝脏有升高f的趋势(R = 0.46, p = 0.023),肾皮质(R = -0.067, p = 0.76)和髓质(R = 0.039, p = 0.86)无升高f的趋势。在模拟和体内实验中,2D T2-IVIM模型产生了更低的f值,并减少了肝脏的变异性。我们的研究结果进一步表明,具有6个b值和3个te(50、60和100 ms)的b-TE方案可能是肝脏T2-IVIM的最佳方案。结论:扩展的2D T2-IVIM模型有效地减少了f中te依赖的偏倚,并可以同时估计腹部器官的IVIM参数和室室T2值。
{"title":"Toward Optimized Intravoxel Incoherent Motion (IVIM) and Compartmental T2 Mapping in Abdominal Organs.","authors":"Julia Stabinska, Thomas A Thiel, Hans-Jörg Wittsack, Alexandra Ljimani, Helge J Zöllner","doi":"10.1002/mrm.70278","DOIUrl":"10.1002/mrm.70278","url":null,"abstract":"<p><strong>Purpose: </strong>To quantitatively assess the bias in the intravoxel incoherent motions (IVIM)-derived pseudo-diffusion volume fraction (f) caused by the differences in relaxation times between the tissue and fluid compartments, and to develop a two-dimensional (b-value-TE) fitting approach for simultaneous T2 and IVIM parameter estimation along with an optimal acquisition protocol for the relaxation-compensated T2-IVIM imaging in the liver.</p><p><strong>Methods: </strong>Simulations were conducted to investigate the TR- and TE-dependent bias in f when using the IVIM model, and to evaluate the applicability of the 2D T2-IVIM model for reducing this bias. The numerical findings were then validated using the in vivo IVIM data from four healthy volunteers on a 3-Tesla MRI scanner. Finally, a numerical framework for optimizing the T2-IVIM protocol for relaxation-compensated f parameter estimation was proposed and tested using the in vivo data.</p><p><strong>Results: </strong>In vivo, the traditional IVIM model showed a trend toward higher f with increasing TE in the liver (R = 0.46, p = 0.023), but not in the kidney cortex (R = -0.067, p = 0.76) or medulla (R = 0.039, p = 0.86). In both simulations and in vivo, 2D T2-IVIM modeling yielded lower f values and reduced variability in the liver. Our results further suggest that a b-TE protocol with six b-values and three TEs (50, 60, and 100 ms) may be optimal for liver T2-IVIM.</p><p><strong>Conclusion: </strong>The extended 2D T2-IVIM model effectively minimizes the TE-dependent bias in f and allows simultaneous estimation of the IVIM parameter and compartmental T2 values in abdominal organs.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100073","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Christina J MacAskill, Bernadette O Erokwu, Yuran Zhu, Guanhua Wang, Andrew Dupuis, Barbara J Schiemann, Gopalakrishnan Ramamurthy, Chetan B Dhakan, Michael Kavran, Chunying Wu, William P Schiemann, Yilun Sun, Mark A Griswold, Xin Yu, Mark D Pagel, Chris A Flask
Purpose: Dynamic contrast-enhanced MRI (DCE-MRI) can assess tumor perfusion using pharmacokinetic models. However, poor DCE-MRI reproducibility from reliance on conventional T1-weighted MRI has limited clinical translation. We evaluated whether Dynamic Contrast Enhanced-Magnetic Resonance Fingerprinting (DCE-MRF), which directly generates quantitative T1 relaxation time constant maps, provides improved precision and statistical power for detecting treatment-induced vascular changes compared to conventional DCE-MRI.
Methods: Twenty female mice bearing orthotopic 4 T1 breast tumors were randomly assigned to DCE-MRF (n = 12) or conventional DCE-MRI (n = 8) cohorts. Both methods acquired matched spatial and temporal resolution (23-s) T1 measurements at baseline, 3 h, and 48 h post-treatment with combretastatin A4 phosphate (120 mg/kg), a known vascular disrupting agent. Perfusion assessments were obtained with a pharmacokinetic Linear Reference Region Model (RKtrans and kep,T) and model-independent initial area under the curve assessments and compared using Wilcoxon signed-rank tests and Hedges' g effect sizes.
Results: DCE-MRF demonstrated 1.3-to-5.1-fold larger effect sizes for RKtrans across all regions and timepoint comparisons, and 1.3-to-1.9-fold larger effect sizes for tumor rim kep,T compared to conventional DCE-MRI. RKtrans and kep,T at 3 h post-treatment in all regions, detected significant vascular recovery for whole tumor RKtrans and both whole tuomor and tumor rim for kep,T at 48 h, whereas DCE-MRI only detected significant changes at 3 h.
Conclusions: DCE-MRF's improved measurement precision and increased effect size translates directly to enhanced statistical power for detecting treatment-induced vascular changes, positioning it as a more reproducible tumor perfusion assessment for animal models and eventually cancer patients.
{"title":"Dynamic Contrast Enhanced-Magnetic Resonance Fingerprinting (DCE-MRF) Improves Detection of Induced Vascular Perfusion Reduction in a Mouse Breast Cancer Model.","authors":"Christina J MacAskill, Bernadette O Erokwu, Yuran Zhu, Guanhua Wang, Andrew Dupuis, Barbara J Schiemann, Gopalakrishnan Ramamurthy, Chetan B Dhakan, Michael Kavran, Chunying Wu, William P Schiemann, Yilun Sun, Mark A Griswold, Xin Yu, Mark D Pagel, Chris A Flask","doi":"10.1002/mrm.70274","DOIUrl":"https://doi.org/10.1002/mrm.70274","url":null,"abstract":"<p><strong>Purpose: </strong>Dynamic contrast-enhanced MRI (DCE-MRI) can assess tumor perfusion using pharmacokinetic models. However, poor DCE-MRI reproducibility from reliance on conventional T<sub>1</sub>-weighted MRI has limited clinical translation. We evaluated whether Dynamic Contrast Enhanced-Magnetic Resonance Fingerprinting (DCE-MRF), which directly generates quantitative T<sub>1</sub> relaxation time constant maps, provides improved precision and statistical power for detecting treatment-induced vascular changes compared to conventional DCE-MRI.</p><p><strong>Methods: </strong>Twenty female mice bearing orthotopic 4 T1 breast tumors were randomly assigned to DCE-MRF (n = 12) or conventional DCE-MRI (n = 8) cohorts. Both methods acquired matched spatial and temporal resolution (23-s) T<sub>1</sub> measurements at baseline, 3 h, and 48 h post-treatment with combretastatin A4 phosphate (120 mg/kg), a known vascular disrupting agent. Perfusion assessments were obtained with a pharmacokinetic Linear Reference Region Model (RK<sup>trans</sup> and k<sub>ep,T</sub>) and model-independent initial area under the curve assessments and compared using Wilcoxon signed-rank tests and Hedges' g effect sizes.</p><p><strong>Results: </strong>DCE-MRF demonstrated 1.3-to-5.1-fold larger effect sizes for RK<sup>trans</sup> across all regions and timepoint comparisons, and 1.3-to-1.9-fold larger effect sizes for tumor rim k<sub>ep,T</sub> compared to conventional DCE-MRI. RK<sup>trans</sup> and k<sub>ep,T</sub> at 3 h post-treatment in all regions, detected significant vascular recovery for whole tumor RK<sup>trans</sup> and both whole tuomor and tumor rim for k<sub>ep,T</sub> at 48 h, whereas DCE-MRI only detected significant changes at 3 h.</p><p><strong>Conclusions: </strong>DCE-MRF's improved measurement precision and increased effect size translates directly to enhanced statistical power for detecting treatment-induced vascular changes, positioning it as a more reproducible tumor perfusion assessment for animal models and eventually cancer patients.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100489","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Sofia Behndig, Anders Garpebring, Daniel Dahlgren Lindström, Jan Malm, Anders Wåhlin, Anders Eklund
Purpose: The aim was to estimate T1 relaxivity of gadobutrol and gadoteric acid in cerebrospinal fluid (CSF) at 3T, to support research on CSF-flow and the glymphatic system in humans utilizing T1 mapping after intrathecal injection.
Methods: Using a phantom, relaxivity was estimated for gadobutrol and gadoteric acid in lumbar CSF and an isotonic solution. All samples were scanned simultaneously using the variable flip angle method with B1 correction, repeated six times on one 3T scanner, and once on a second 3T scanner. Difference in relaxivity between CSF and the isotonic solution were evaluated from the repeated measurements.
Results: There was a significant difference in relaxivity between CSF and the isotonic solution for both gadobutrol and gadoteric acid. The relaxivity for gadobutrol for the respective scanners was estimated to 3.02 ± 0.09 vs. 3.63 L mmol-1 s-1 in CSF and 2.35 ± 0.05 vs. 2.74 L mmol-1 s-1 in isotonic solution. For gadoteric acid, corresponding results were 2.47 ± 0.02 vs. 2.91 L mmol-1 s-1 in CSF and 2.37 ± 0.03 vs. 2.8 L mmol-1 s-1 in isotonic solution. Between the scanners, there was a high correlation (R2 0.998) but an 18% scaling difference in the T1 relaxation rates and corresponding relaxivities.
Conclusions: The relaxivity was higher in CSF than in the isotonic solution, particularly for gadobutrol. Systematic differences in relaxivity between scanners may potentially be corrected using a scaling factor derived from the T1 time of baseline CSF. For CSF studies using T1 mapping with a gadolinium-based contrast agent, we recommend using a CSF-specific relaxivity constant.
目的:评估3T时脑脊髓液(CSF)中gadobutrol和gadoteracid的T1弛豫度,为鞘内注射后利用T1作图对人CSF流量和淋巴系统的研究提供支持。方法:采用幻像法,对加多布托和加多特酸在腰椎脑脊液和等渗溶液中的松弛度进行估计。所有样品使用B1校正的可变翻转角法同时扫描,在一台3T扫描仪上重复6次,在另一台3T扫描仪上重复1次。通过重复测量,评价脑脊液与等渗溶液弛豫度的差异。结果:加多布特罗和加多特酸等渗液对脑脊液的松弛度有显著影响。在脑脊液中,gadobutrol的松弛度分别为3.02±0.09和3.63 L mmol-1 s-1,在等渗溶液中,松弛度分别为2.35±0.05和2.74 L mmol-1 s-1。对于牛乳酸,相应的结果在脑脊液中为2.47±0.02比2.91 L mmol-1 s-1,在等渗溶液中为2.37±0.03比2.8 L mmol-1 s-1。在不同的扫描仪之间,T1弛豫率和相应的弛豫率有很高的相关性(R2 0.998),但尺度差异为18%。结论:脑脊液的弛豫度明显高于等渗溶液,尤其是加多布托。扫描器之间弛豫度的系统性差异可能会通过从基线脑脊液T1时间得出的比例因子得到纠正。对于使用钆基造影剂进行T1定位的脑脊液研究,我们建议使用脑脊液特异性弛豫常数。
{"title":"Relaxivity of Gadobutrol and Gadoteric Acid in Cerebrospinal Fluid at 3T.","authors":"Sofia Behndig, Anders Garpebring, Daniel Dahlgren Lindström, Jan Malm, Anders Wåhlin, Anders Eklund","doi":"10.1002/mrm.70284","DOIUrl":"https://doi.org/10.1002/mrm.70284","url":null,"abstract":"<p><strong>Purpose: </strong>The aim was to estimate T1 relaxivity of gadobutrol and gadoteric acid in cerebrospinal fluid (CSF) at 3T, to support research on CSF-flow and the glymphatic system in humans utilizing T1 mapping after intrathecal injection.</p><p><strong>Methods: </strong>Using a phantom, relaxivity was estimated for gadobutrol and gadoteric acid in lumbar CSF and an isotonic solution. All samples were scanned simultaneously using the variable flip angle method with B1 correction, repeated six times on one 3T scanner, and once on a second 3T scanner. Difference in relaxivity between CSF and the isotonic solution were evaluated from the repeated measurements.</p><p><strong>Results: </strong>There was a significant difference in relaxivity between CSF and the isotonic solution for both gadobutrol and gadoteric acid. The relaxivity for gadobutrol for the respective scanners was estimated to 3.02 ± 0.09 vs. 3.63 L mmol<sup>-1</sup> s<sup>-1</sup> in CSF and 2.35 ± 0.05 vs. 2.74 L mmol<sup>-1</sup> s<sup>-1</sup> in isotonic solution. For gadoteric acid, corresponding results were 2.47 ± 0.02 vs. 2.91 L mmol<sup>-1</sup> s<sup>-1</sup> in CSF and 2.37 ± 0.03 vs. 2.8 L mmol<sup>-1</sup> s<sup>-1</sup> in isotonic solution. Between the scanners, there was a high correlation (R<sup>2</sup> 0.998) but an 18% scaling difference in the T1 relaxation rates and corresponding relaxivities.</p><p><strong>Conclusions: </strong>The relaxivity was higher in CSF than in the isotonic solution, particularly for gadobutrol. Systematic differences in relaxivity between scanners may potentially be corrected using a scaling factor derived from the T1 time of baseline CSF. For CSF studies using T1 mapping with a gadolinium-based contrast agent, we recommend using a CSF-specific relaxivity constant.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146099928","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Vladimir Grouza, Yawen Shi, Sean Goldfarb, Klaudia M Bednarz, Isabella Gomez, Marius Tuznik, Zhe Wu, Hooman Bagheri, Katherine A Siminovitch, Alan C Peterson, Thomas Stroh, David A Rudko
Purpose: To evaluate the correspondence between myelin water fraction (MWF) estimates derived from multi-echo spin echo (MESE) and multi-echo gradient echo (MGRE) imaging in fixed mouse brain tissue, using a panel of myelin basic protein (Mbp) enhancer-edited mouse lines exhibiting graded hypomyelination.
Methods: Fifteen mouse brains from five genetically modified mouse lines were imaged using ex vivo 7 T MRI with high-resolution 3D MESE and MGRE protocols. MWF maps were computed from the MESE approach using regularized non-negative least squares (NNLS) decomposition, and from the MGRE approach using robust principal component analysis (rPCA). MWF values were then parcellated across major white matter tracts using an atlas-based pipeline and validated against biological markers, including Mbp gene expression and FluoroMyelin fluorescence intensity.
Results: Both MESE- and MGRE-derived MWF maps exhibited high sensitivity to myelin content and resolved mouse line-dependent differences across white matter tracts. Region-specific MWF estimates were highly correlated across contrasts (r = 0.96), with MGRE yielding consistently higher MWF values, particularly in smaller tracts. MESE derived MWF values showed subtle underestimation of myelin content in hypomyelinated white matter regions. Both MWF measures showed strong correlations with Mbp messenger ribonucleic acid (mRNA) (r = 0.72-0.97) and FluoroMyelin staining (r = 0.50-0.92), with stronger histological correlations for MGRE-derived values.
Conclusion: Both MESE and MGRE sequences provide biologically meaningful estimates of myelin content in fixed tissue but exhibit contrast-specific sensitivities and biases. MGRE combined with rPCA offers time efficient imaging and robustness in fine white matter structures, supporting its utility for high-resolution preclinical myelin mapping.
{"title":"Quantitative Comparison of Multi-Echo Spin Echo and Multi-Echo Gradient Echo Myelin Water Imaging in a Panel of Mbp Enhancer-Edited Mouse Lines.","authors":"Vladimir Grouza, Yawen Shi, Sean Goldfarb, Klaudia M Bednarz, Isabella Gomez, Marius Tuznik, Zhe Wu, Hooman Bagheri, Katherine A Siminovitch, Alan C Peterson, Thomas Stroh, David A Rudko","doi":"10.1002/mrm.70275","DOIUrl":"https://doi.org/10.1002/mrm.70275","url":null,"abstract":"<p><strong>Purpose: </strong>To evaluate the correspondence between myelin water fraction (MWF) estimates derived from multi-echo spin echo (MESE) and multi-echo gradient echo (MGRE) imaging in fixed mouse brain tissue, using a panel of myelin basic protein (Mbp) enhancer-edited mouse lines exhibiting graded hypomyelination.</p><p><strong>Methods: </strong>Fifteen mouse brains from five genetically modified mouse lines were imaged using ex vivo 7 T MRI with high-resolution 3D MESE and MGRE protocols. MWF maps were computed from the MESE approach using regularized non-negative least squares (NNLS) decomposition, and from the MGRE approach using robust principal component analysis (rPCA). MWF values were then parcellated across major white matter tracts using an atlas-based pipeline and validated against biological markers, including Mbp gene expression and FluoroMyelin fluorescence intensity.</p><p><strong>Results: </strong>Both MESE- and MGRE-derived MWF maps exhibited high sensitivity to myelin content and resolved mouse line-dependent differences across white matter tracts. Region-specific MWF estimates were highly correlated across contrasts (r = 0.96), with MGRE yielding consistently higher MWF values, particularly in smaller tracts. MESE derived MWF values showed subtle underestimation of myelin content in hypomyelinated white matter regions. Both MWF measures showed strong correlations with Mbp messenger ribonucleic acid (mRNA) (r = 0.72-0.97) and FluoroMyelin staining (r = 0.50-0.92), with stronger histological correlations for MGRE-derived values.</p><p><strong>Conclusion: </strong>Both MESE and MGRE sequences provide biologically meaningful estimates of myelin content in fixed tissue but exhibit contrast-specific sensitivities and biases. MGRE combined with rPCA offers time efficient imaging and robustness in fine white matter structures, supporting its utility for high-resolution preclinical myelin mapping.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146099978","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Ilias I Giannakopoulos, Bei Zhang, José E Cruz Serrallés, Ryan Brown, Riccardo Lattanzi
Purpose: Image quality and resolution in MRI are fundamentally constrained by the performance of radiofrequency (RF) coils used to excite the spins and receive the signal. Electromagnetic (EM) simulations are essential for optimizing coil performance. Existing tools are often slow, memory-intensive, and require expensive licenses. To address these limitations, we introduce a novel, comprehensive, open-source EM simulation tool for RF coil design in MRI.
Theory and methods: Our toolbox consists of four complementary software components: (1) a full-wave 3D EM solver based on the wire-surface-volume integral equation (WSVIE), where tensor decompositions reduce memory usage and accelerate simulations for fine body model resolutions; (2) a reduced-order model technique enabling patient-specific coil simulations in minutes; (3) a fully automatic circuit co-simulator for coil tuning, matching, decoupling, preamplifier decoupling, and detuning; and (4) a numerical EM basis generator that can be used to compute ultimate performance metrics. We demonstrated the toolbox with a series of simulations for different applications at 7 T MRI.
Results: Our proposed reduced-order model WSVIE solver was 70 times faster compared to a commercial solver for the simulation of a 31-channel 7 T head coil. Our co-simulator tuned, matched, and decoupled the array in 30 min, compared to a few days time of manual interactions needed with the commercial package. The average difference between the signal-to-noise ratio maps was less than 15%.
Conclusion: The proposed open-source simulation framework enables fast, memory-friendly, accurate, and anatomy-specific RF coil array design, making it a powerful tool for RF coil engineering.
目的:MRI的图像质量和分辨率从根本上受到用于激发自旋和接收信号的射频(RF)线圈性能的限制。电磁(EM)仿真对于优化线圈性能至关重要。现有的工具通常很慢,占用大量内存,并且需要昂贵的许可证。为了解决这些限制,我们引入了一种新颖、全面、开源的电磁仿真工具,用于MRI中的射频线圈设计。理论和方法:我们的工具箱由四个互补的软件组件组成:(1)基于线-表面-体积积分方程(WSVIE)的全波3D EM求解器,其中张量分解减少了内存使用并加速了精细体模型分辨率的模拟;(2)一种简化的模型技术,可以在几分钟内对特定患者的线圈进行模拟;(3)用于线圈调谐、匹配、去耦、前置放大器去耦和失谐的全自动电路联合模拟器;(4)可用于计算最终性能指标的数值EM基生成器。我们通过一系列模拟演示了该工具箱在7 T MRI上的不同应用。结果:我们提出的降阶模型WSVIE求解器在模拟31通道7t头线圈时比商用求解器快70倍。我们的联合模拟器在30分钟内对阵列进行调优、匹配和解耦,而商用套件需要几天的人工交互时间。信噪比图之间的平均差异小于15%。结论:所提出的开源仿真框架能够实现快速、记忆友好、准确和解剖特定的射频线圈阵列设计,使其成为射频线圈工程的强大工具。
{"title":"An Open-Source Software Toolbox for Rapid Radiofrequency Coil Design and Evaluation in MRI.","authors":"Ilias I Giannakopoulos, Bei Zhang, José E Cruz Serrallés, Ryan Brown, Riccardo Lattanzi","doi":"10.1002/mrm.70269","DOIUrl":"https://doi.org/10.1002/mrm.70269","url":null,"abstract":"<p><strong>Purpose: </strong>Image quality and resolution in MRI are fundamentally constrained by the performance of radiofrequency (RF) coils used to excite the spins and receive the signal. Electromagnetic (EM) simulations are essential for optimizing coil performance. Existing tools are often slow, memory-intensive, and require expensive licenses. To address these limitations, we introduce a novel, comprehensive, open-source EM simulation tool for RF coil design in MRI.</p><p><strong>Theory and methods: </strong>Our toolbox consists of four complementary software components: (1) a full-wave 3D EM solver based on the wire-surface-volume integral equation (WSVIE), where tensor decompositions reduce memory usage and accelerate simulations for fine body model resolutions; (2) a reduced-order model technique enabling patient-specific coil simulations in minutes; (3) a fully automatic circuit co-simulator for coil tuning, matching, decoupling, preamplifier decoupling, and detuning; and (4) a numerical EM basis generator that can be used to compute ultimate performance metrics. We demonstrated the toolbox with a series of simulations for different applications at 7 T MRI.</p><p><strong>Results: </strong>Our proposed reduced-order model WSVIE solver was 70 times faster compared to a commercial solver for the simulation of a 31-channel 7 T head coil. Our co-simulator tuned, matched, and decoupled the array in 30 min, compared to a few days time of manual interactions needed with the commercial package. The average difference between the signal-to-noise ratio maps was less than 15%.</p><p><strong>Conclusion: </strong>The proposed open-source simulation framework enables fast, memory-friendly, accurate, and anatomy-specific RF coil array design, making it a powerful tool for RF coil engineering.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146086350","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Chenyang Zhao, Fanhua Guo, Zidong Yang, Xingfeng Shao, Samantha J Ma, Alexander J S Beckett, An T Vu, David A Feinberg, Danny J J Wang
Purpose: To achieve high resolution (≤ 1 mm isotropic) whole-brain perfusion imaging at 7 T with next generation ASL pulse sequence, reconstruction algorithm, and MRI hardware.
Methods: We capitalized on three major innovations: (1) FLASH-based pseudo-Continuous ASL (pCASL) sequence with rotated golden-angle stack-of-spirals (rGA-SoS) sampling; (2) dynamic compressed sensing (CS) reconstruction with high spatiotemporal resolution and motion-resolved self-navigation; and (3) high density array coil and high-performance Impulse gradient of the NexGen 7 T scanner. Whole-brain laminar perfusion imaging was validated by correlation with histological data of microvascular and cell body density, as well as through finger-tapping (FT) and working memory (WM) fMRI tasks.
Results: The proposed rGA-SoS sequence achieved a 3.3-fold SNR and 2-fold higher intraclass correlation coefficient (ICC) compared to matched Cartesian sampling at 7 T, enabling up to 0.8 mm isotropic spatial resolution and/or a temporal resolution of 14 s at 1 mm isotropic. Resting-state perfusion showed strong correlations with microvascular and cell body density. Laminar perfusion fMRI revealed a two-peak activation in the primary motor cortex induced by FT, and distinct laminar profiles for task-positive and task-negative networks during WM task.
Conclusion: This method offers a noninvasive imaging tool to bridge the gap between mesoscopic MRI with microscopic cellular imaging, as well as to investigate neural excitation and inhibition underlying positive and negative fMRI activations.
{"title":"Next Generation 7 Tesla Arterial Spin Labeling With Rotated Spiral Acquisition Enables Mesoscale Resolution in 3D Brain Perfusion and Functional MRI.","authors":"Chenyang Zhao, Fanhua Guo, Zidong Yang, Xingfeng Shao, Samantha J Ma, Alexander J S Beckett, An T Vu, David A Feinberg, Danny J J Wang","doi":"10.1002/mrm.70265","DOIUrl":"https://doi.org/10.1002/mrm.70265","url":null,"abstract":"<p><strong>Purpose: </strong>To achieve high resolution (≤ 1 mm isotropic) whole-brain perfusion imaging at 7 T with next generation ASL pulse sequence, reconstruction algorithm, and MRI hardware.</p><p><strong>Methods: </strong>We capitalized on three major innovations: (1) FLASH-based pseudo-Continuous ASL (pCASL) sequence with rotated golden-angle stack-of-spirals (rGA-SoS) sampling; (2) dynamic compressed sensing (CS) reconstruction with high spatiotemporal resolution and motion-resolved self-navigation; and (3) high density array coil and high-performance Impulse gradient of the NexGen 7 T scanner. Whole-brain laminar perfusion imaging was validated by correlation with histological data of microvascular and cell body density, as well as through finger-tapping (FT) and working memory (WM) fMRI tasks.</p><p><strong>Results: </strong>The proposed rGA-SoS sequence achieved a 3.3-fold SNR and 2-fold higher intraclass correlation coefficient (ICC) compared to matched Cartesian sampling at 7 T, enabling up to 0.8 mm isotropic spatial resolution and/or a temporal resolution of 14 s at 1 mm isotropic. Resting-state perfusion showed strong correlations with microvascular and cell body density. Laminar perfusion fMRI revealed a two-peak activation in the primary motor cortex induced by FT, and distinct laminar profiles for task-positive and task-negative networks during WM task.</p><p><strong>Conclusion: </strong>This method offers a noninvasive imaging tool to bridge the gap between mesoscopic MRI with microscopic cellular imaging, as well as to investigate neural excitation and inhibition underlying positive and negative fMRI activations.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146086337","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Dariya Malyarenko, Brian D Ross, Johannes M Peeters, Ajit Devaraj, Ramin Jafari, Humera Tariq, Kristen M Pettit, Moshe Talpaz, Gary D Luker, Thomas L Chenevert
Purpose: To improve accuracy of apparent diffusion coefficient (ADC) measurement across different bone-marrow (BM) sites for myelofibrosis (MF) patients.
Methods: Vendor-provided ADC gradient nonlinearity correction (GNC) was implemented for 41 MF study subjects on a 3T clinical scanner. The degree of bias correction was assessed on b-maps across the BM regions-of-interest defined for femoral trochanter, posterior ilium and spine vertebrae of all subjects. Bias variability from subject repositioning was evaluated for five subjects with longitudinal scans using Bland-Altman analysis. BM ADC with and without GNC were compared in 22 subjects with MF grade > 0 (iliac fat fraction < 40%). The GNC effect on ADC heterogeneity trends across bone sites was assessed using paired t-test and correlation to MF-grade.
Results: The observed bias was substantial across BM sites ranging from -10% for edge vertebrae to +8.4% for trochanter across all subjects with a 13.7% intra-subject median range. The effect of irreproducible positioning in longitudinal scans was ±4.2% bias (95% limits-of-agreement) with range of ±8.5% (highest for L1 and L5). By removing bias, GNC improved ADC accuracy and longitudinal reproducibility and emphasized biological heterogeneity for femoral trochanter versus ilium and edge vertebrae (T11-L1, L5, and S1). GNC revealed significant ADC differences between trochanters and edge vertebrae (p = 0.007), while edge vertebrae and ilium ADC became more uniform (p = 0.07), with heterogeneity and values correlated to MF-grade.
Conclusion: On-scanner correction of gradient nonlinearity bias in bone marrow ADC reduces technical nonuniformity and variability and allows accurate and reproducible characterization of heterogeneous disease for myelofibrosis patients.
{"title":"On-Scanner Correction of Gradient Nonlinearity Bias for Accurate Assessment of Diffusion Heterogeneity Across Bone Sites in Myelofibrosis Patients.","authors":"Dariya Malyarenko, Brian D Ross, Johannes M Peeters, Ajit Devaraj, Ramin Jafari, Humera Tariq, Kristen M Pettit, Moshe Talpaz, Gary D Luker, Thomas L Chenevert","doi":"10.1002/mrm.70273","DOIUrl":"https://doi.org/10.1002/mrm.70273","url":null,"abstract":"<p><strong>Purpose: </strong>To improve accuracy of apparent diffusion coefficient (ADC) measurement across different bone-marrow (BM) sites for myelofibrosis (MF) patients.</p><p><strong>Methods: </strong>Vendor-provided ADC gradient nonlinearity correction (GNC) was implemented for 41 MF study subjects on a 3T clinical scanner. The degree of bias correction was assessed on b-maps across the BM regions-of-interest defined for femoral trochanter, posterior ilium and spine vertebrae of all subjects. Bias variability from subject repositioning was evaluated for five subjects with longitudinal scans using Bland-Altman analysis. BM ADC with and without GNC were compared in 22 subjects with MF grade > 0 (iliac fat fraction < 40%). The GNC effect on ADC heterogeneity trends across bone sites was assessed using paired t-test and correlation to MF-grade.</p><p><strong>Results: </strong>The observed bias was substantial across BM sites ranging from -10% for edge vertebrae to +8.4% for trochanter across all subjects with a 13.7% intra-subject median range. The effect of irreproducible positioning in longitudinal scans was ±4.2% bias (95% limits-of-agreement) with range of ±8.5% (highest for L1 and L5). By removing bias, GNC improved ADC accuracy and longitudinal reproducibility and emphasized biological heterogeneity for femoral trochanter versus ilium and edge vertebrae (T11-L1, L5, and S1). GNC revealed significant ADC differences between trochanters and edge vertebrae (p = 0.007), while edge vertebrae and ilium ADC became more uniform (p = 0.07), with heterogeneity and values correlated to MF-grade.</p><p><strong>Conclusion: </strong>On-scanner correction of gradient nonlinearity bias in bone marrow ADC reduces technical nonuniformity and variability and allows accurate and reproducible characterization of heterogeneous disease for myelofibrosis patients.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-01-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146086299","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}