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Impact of particle size on R 2 * and fat fraction estimation for accurate assessment of hepatic iron overload and steatosis using MRI. 颗粒大小对r2 *和脂肪分数估算的影响,用于MRI准确评估肝铁超载和脂肪变性。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2025-01-02 DOI: 10.1002/mrm.30419
Utsav Shrestha, Sarah Brasher, Zachary Abramson, Cara E Morin, Aaryani Tipirneni-Sajja

Purpose: To investigate the impact of iron particle size on R 2 * $$ {R}_2^{ast } $$ and fat fraction (FF) estimations for coexisting hepatic iron overload and steatosis condition using Monte Carlo simulations and phantoms.

Methods: Three iron particle sizes (0.38, 0.52, and 0.71 μm) were studied using simulations and phantoms. Virtual liver models mimicking in vivo spatial distribution of fat droplets and iron deposits were created, and MRI signals were synthesized using Monte Carlo simulations for FF 1%-30% and liver iron concentration (LIC) 1-20 mg/g. Seventy-five fat-iron phantoms with varying iron (0-8 μg/mL) and fat (0%-40%) concentrations and particle sizes were constructed. Three-way analysis of variance was used to assess the effect of iron particle size on R 2 * $$ {R}_2^{ast } $$ and FF estimations.

Results: In simulations, estimated and true FF were in excellent agreement (slope: 0.93-1.09) for liver iron concentration ≤ 13 mg/g. For both simulations and phantoms, FF estimation bias increased as iron concentration increased and particle size decreased, with 0.71μm iron particle having the lowest bias (≤ 20%), and 0.52 μm and 0.38 μm iron particles producing higher bias (≥ 20%) for higher iron concentrations and lower FFs. Additionally, R 2 * $$ {R}_2^{ast } $$ increased linearly with increasing iron concentration (r ≥ 0.87) and decreasing particle size. Iron particle size significantly influenced the estimated versus true FF (simulations: p = 0.04; phantoms: p = 0.03) and R 2 * $$ {R}_2^{ast } $$ -iron concentration (simulations: p < 0.001; phantoms: p < 0.01) relationships. Heatmap demonstrated broader region with higher FF estimation bias as iron particle size decreased, especially at higher iron concentration.

Conclusion: R 2 * $$ {R}_2^{ast } $$ and FF estimations are affected by iron particle size, with smaller particles leading to higher R 2 * $$ {R}_2^{ast } $$ values and increased FF estimation bias.

目的:通过蒙特卡罗模拟和模拟研究铁粒度对肝脏铁超载和脂肪变性共存状态下r2 * $$ {R}_2^{ast } $$和脂肪分数(FF)估计的影响。方法:采用模拟和模拟的方法研究了3种铁颗粒尺寸(0.38、0.52和0.71 μm)。建立了模拟体内脂肪滴和铁沉积空间分布的虚拟肝脏模型,并用蒙特卡罗模拟方法合成了FF 1的MRI信号%-30% and liver iron concentration (LIC) 1-20 mg/g. Seventy-five fat-iron phantoms with varying iron (0-8 μg/mL) and fat (0%-40%) concentrations and particle sizes were constructed. Three-way analysis of variance was used to assess the effect of iron particle size on R 2 * $$ {R}_2^{ast } $$ and FF estimations.Results: In simulations, estimated and true FF were in excellent agreement (slope: 0.93-1.09) for liver iron concentration ≤ 13 mg/g. For both simulations and phantoms, FF estimation bias increased as iron concentration increased and particle size decreased, with 0.71μm iron particle having the lowest bias (≤ 20%), and 0.52 μm and 0.38 μm iron particles producing higher bias (≥ 20%) for higher iron concentrations and lower FFs. Additionally, R 2 * $$ {R}_2^{ast } $$ increased linearly with increasing iron concentration (r ≥ 0.87) and decreasing particle size. Iron particle size significantly influenced the estimated versus true FF (simulations: p = 0.04; phantoms: p = 0.03) and R 2 * $$ {R}_2^{ast } $$ -iron concentration (simulations: p Conclusion: R 2 * $$ {R}_2^{ast } $$ and FF estimations are affected by iron particle size, with smaller particles leading to higher R 2 * $$ {R}_2^{ast } $$ values and increased FF estimation bias.
{"title":"<ArticleTitle xmlns:ns0=\"http://www.w3.org/1998/Math/MathML\">Impact of particle size on <ns0:math> <ns0:mrow><ns0:msubsup><ns0:mi>R</ns0:mi> <ns0:mn>2</ns0:mn> <ns0:mo>*</ns0:mo></ns0:msubsup> </ns0:mrow> </ns0:math> and fat fraction estimation for accurate assessment of hepatic iron overload and steatosis using MRI.","authors":"Utsav Shrestha, Sarah Brasher, Zachary Abramson, Cara E Morin, Aaryani Tipirneni-Sajja","doi":"10.1002/mrm.30419","DOIUrl":"https://doi.org/10.1002/mrm.30419","url":null,"abstract":"<p><strong>Purpose: </strong>To investigate the impact of iron particle size on <math> <semantics> <mrow><msubsup><mi>R</mi> <mn>2</mn> <mo>*</mo></msubsup> </mrow> <annotation>$$ {R}_2^{ast } $$</annotation></semantics> </math> and fat fraction (FF) estimations for coexisting hepatic iron overload and steatosis condition using Monte Carlo simulations and phantoms.</p><p><strong>Methods: </strong>Three iron particle sizes (0.38, 0.52, and 0.71 μm) were studied using simulations and phantoms. Virtual liver models mimicking in vivo spatial distribution of fat droplets and iron deposits were created, and MRI signals were synthesized using Monte Carlo simulations for FF 1%-30% and liver iron concentration (LIC) 1-20 mg/g. Seventy-five fat-iron phantoms with varying iron (0-8 μg/mL) and fat (0%-40%) concentrations and particle sizes were constructed. Three-way analysis of variance was used to assess the effect of iron particle size on <math> <semantics> <mrow><msubsup><mi>R</mi> <mn>2</mn> <mo>*</mo></msubsup> </mrow> <annotation>$$ {R}_2^{ast } $$</annotation></semantics> </math> and FF estimations.</p><p><strong>Results: </strong>In simulations, estimated and true FF were in excellent agreement (slope: 0.93-1.09) for liver iron concentration ≤ 13 mg/g. For both simulations and phantoms, FF estimation bias increased as iron concentration increased and particle size decreased, with 0.71μm iron particle having the lowest bias (≤ 20%), and 0.52 μm and 0.38 μm iron particles producing higher bias (≥ 20%) for higher iron concentrations and lower FFs. Additionally, <math> <semantics> <mrow><msubsup><mi>R</mi> <mn>2</mn> <mo>*</mo></msubsup> </mrow> <annotation>$$ {R}_2^{ast } $$</annotation></semantics> </math> increased linearly with increasing iron concentration (r ≥ 0.87) and decreasing particle size. Iron particle size significantly influenced the estimated versus true FF (simulations: p = 0.04; phantoms: p = 0.03) and <math> <semantics> <mrow><msubsup><mi>R</mi> <mn>2</mn> <mo>*</mo></msubsup> </mrow> <annotation>$$ {R}_2^{ast } $$</annotation></semantics> </math> -iron concentration (simulations: p < 0.001; phantoms: p < 0.01) relationships. Heatmap demonstrated broader region with higher FF estimation bias as iron particle size decreased, especially at higher iron concentration.</p><p><strong>Conclusion: </strong><math> <semantics> <mrow><msubsup><mi>R</mi> <mn>2</mn> <mo>*</mo></msubsup> </mrow> <annotation>$$ {R}_2^{ast } $$</annotation></semantics> </math> and FF estimations are affected by iron particle size, with smaller particles leading to higher <math> <semantics> <mrow><msubsup><mi>R</mi> <mn>2</mn> <mo>*</mo></msubsup> </mrow> <annotation>$$ {R}_2^{ast } $$</annotation></semantics> </math> values and increased FF estimation bias.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2025-01-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142922044","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Detection of elevated succinate in brain during circulatory arrest in a piglet model: A 3T 1H MR spectroscopy study. 在仔猪模型中检测循环停止时脑中升高的琥珀酸:3T 1H MR 光谱研究。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-31 DOI: 10.1002/mrm.30414
Ralph E Hurd, Meng Gu, Kenichi Okamura, Masafumi Shibata, Yoshikazu Ono, Moussa Haidar, R Kirk Riemer, Frank L Hanley, Daniel M Spielman

Purpose: To measure and validate elevated succinate in brain during circulatory arrest in a piglet model of cardiopulmonary bypass.

Methods: Using data from an archive of 3T 1H MR spectra acquired in previous in-magnet studies, dynamic plots of succinate, spectral simulations and difference spectra were generated for analysis and validation.

Results: Elevation of succinate during circulatory arrest was observed and validated. Fitting bias was evaluated as a function of the line-widths and signal-to-noise ratios of the archived data. Succinate increases were independent of bypass temperature. Succinate elevation was also not observed with antegrade cerebral perfusion.

Conclusion: Although spectrally overlapped and at sub-millimolar levels, elevated brain succinate can be reliably measured by dynamic MR spectroscopy at 3T. Noise dependent bias of the stronger overlapping signals did not impact the succinate measurement. Elevated succinate during circulatory arrest and its recovery after reperfusion was observed. This finding is consistent with earlier reports that correlate elevated succinate with ischemic-reperfusion injury.

目的:测定和验证体外循环仔猪模型循环停搏时脑内琥珀酸盐的升高。方法:利用以往在磁体内研究中获得的3T 1H磁共振光谱档案数据,生成琥珀酸盐的动态图、光谱模拟和差异光谱,进行分析和验证。结果:观察并验证了循环骤停时琥珀酸盐升高。将拟合偏差作为存档数据的线宽和信噪比的函数进行评估。琥珀酸盐的增加与旁路温度无关。顺行脑灌注组也未观察到琥珀酸盐升高。结论:虽然光谱重叠且处于亚毫摩尔水平,但动态磁共振光谱在3T时可以可靠地测量脑琥珀酸升高。较强重叠信号的噪声依赖偏置不影响琥珀酸盐测量。循环骤停时琥珀酸盐升高,再灌注后恢复。这一发现与早期报道的琥珀酸盐升高与缺血-再灌注损伤相关一致。
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引用次数: 0
T2* relaxometry of fetal brain structures using low-field (0.55T) MRI. 低场(0.55T) MRI对胎儿大脑结构的T2*弛豫测量。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-31 DOI: 10.1002/mrm.30409
Kelly Payette, Alena U Uus, Ella Kollstad, Jordina Aviles Verdera, Dario Gallo, Megan Hall, Joseph V Hajnal, Mary A Rutherford, Lisa Story, Jana Hutter

Purpose: Human brain development during gestation is complex, as both structure and function are rapidly forming. Structural imaging methods using MRI are well developed to explore these changes, but functional imaging tools are lacking. Low-field MRI is a promising modality to bridge this gap. The longer intrinsic T2* values at low field strengths increase the dynamic range and enable the quantification of individual brain regions with low T2* values, such as deep gray matter. This study investigates regional brain T2* quantification throughout the second half of gestation on low-field 0.55T MRI.

Methods: Dynamic multi-echo gradient-echo sequences were acquired in 135 cases at 0.55 T between 20 and 40 weeks' gestation. Automatic high-resolution reconstruction and segmentation tools were developed, resulting in T2* values of seven individual anatomical brain structures for each subject. These regional brain T2* values were analyzed throughout gestation.

Results: All regional fetal brain T2* values decreased throughout gestation (p < 0.01). Each anatomical brain structure had varying ranges and decay rates, with the cerebellum and white matter displaying the highest (nonfluid structure) values, with the maximum values between 350 and 400 ms at about 20 weeks. The brainstem and deep gray matter had the lowest range of T2* values, reaching values of 250 ms early in gestation. The matched volumetric assessment of the different structures demonstrated expected growth, matching current literature.

Conclusion: Low-field MRI allows for a detailed, regional T2* analysis of the fetal brain, with more inclusive norms to be developed due to its wider bore.

目的:妊娠期人脑发育复杂,结构和功能都在快速形成。磁共振成像(MRI)的结构成像方法已经发展得很好,但缺乏功能性成像工具。低场MRI是一种很有前途的方式来弥补这一差距。低场强下较长的本征T2*值增加了动态范围,可以量化具有低T2*值的单个大脑区域,如深部灰质。本研究在低场0.55T MRI上研究妊娠后半期大脑区域T2*量化。方法:对135例妊娠20 ~ 40周0.55 T时的胎儿进行动态多回波梯度回波序列测定。开发了自动高分辨率重建和分割工具,得到每个受试者7个个体脑解剖结构的T2*值。在整个妊娠期间分析这些区域脑T2*值。结果:胎儿脑各区域T2*值在妊娠期间均呈下降趋势(p < 2*),妊娠早期可达250ms。不同结构的匹配体积评估显示了预期的增长,与当前文献相符。结论:低场MRI可以对胎儿大脑进行详细的区域T2*分析,由于其更宽的孔径,因此需要制定更具包容性的规范。
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引用次数: 0
WALINET: A water and lipid identification convolutional neural network for nuisance signal removal in   1 H $$ {}^1mathrm{H} $$ MR spectroscopic imaging WALINET:一种水和脂质识别卷积神经网络去除1 H $$ {}^1mathrm{H} $$磁共振光谱成像中的干扰信号。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-31 DOI: 10.1002/mrm.30402
Paul J. Weiser, Georg Langs, Stanislav Motyka, Wolfgang Bogner, Sébastien Courvoisier, Malte Hoffmann, Antoine Klauser, Ovidiu C. Andronesi
<div> <section> <h3> Purpose</h3> <p>Proton magnetic resonance spectroscopic imaging (<span></span><math> <semantics> <mrow> <msup> <mo> </mo> <mrow> <mn>1</mn> </mrow> </msup> <mi>H</mi> </mrow> <annotation>$$ {}^1mathrm{H} $$</annotation> </semantics></math>-MRSI) provides noninvasive spectral-spatial mapping of metabolism. However, long-standing problems in whole-brain <span></span><math> <semantics> <mrow> <msup> <mo> </mo> <mrow> <mn>1</mn> </mrow> </msup> <mi>H</mi> </mrow> <annotation>$$ {}^1mathrm{H} $$</annotation> </semantics></math>-MRSI are spectral overlap of metabolite peaks with large lipid signal from scalp, and overwhelming water signal that distorts spectra. Fast and effective methods are needed for high-resolution <span></span><math> <semantics> <mrow> <msup> <mo> </mo> <mrow> <mn>1</mn> </mrow> </msup> <mi>H</mi> </mrow> <annotation>$$ {}^1mathrm{H} $$</annotation> </semantics></math>-MRSI to accurately remove lipid and water signals while preserving the metabolite signal. The potential of supervised neural networks for this task remains unexplored, despite their success for other MRSI processing.</p> </section> <section> <h3> Methods</h3> <p>We introduce a deep learning method based on a modified Y-NET network for water and lipid removal in whole-brain <span></span><math> <semantics> <mrow> <msup> <mo> </mo> <mrow> <mn>1</mn> </mrow> </msup> <mi>H</mi> </mrow> <annotation>$$ {}^1mathrm{H} $$</annotation> </semantics></math>-MRSI. The WALINET (WAter and LIpid neural NETwork) was compa
目的:质子磁共振波谱成像(1h $$ {}^1mathrm{H} $$ -MRSI)提供代谢的无创光谱空间映射。然而,全脑1 H $$ {}^1mathrm{H} $$ -MRSI长期存在的问题是代谢产物峰的光谱重叠与来自头皮的大脂质信号,以及压倒性的水信号扭曲了光谱。高分辨率1 H $$ {}^1mathrm{H} $$ -MRSI需要快速有效的方法来准确去除脂质和水信号,同时保留代谢物信号。监督神经网络在这项任务中的潜力仍未被探索,尽管它们在其他核磁共振成像处理中取得了成功。方法:我们引入了一种基于改进的Y-NET网络的深度学习方法,用于全脑1 H $$ {}^1mathrm{H} $$ -MRSI中水和脂质的去除。将WALINET(水和脂质神经网络)与最先进的脂质L2正则化和Hankel-Lanczos奇异值分解(HLSVD)水抑制等传统方法进行了比较。采用NMRSE、信噪比、CRLB和FWHM指标在模拟模型和活体全脑mri上对方法进行评估。结果:WALINET的速度明显更快,高分辨率全脑mri仅需8秒,而传统的HLSVD+L2仅需42分钟。WALINET对脑内脂质和水分的抑制作用分别为25-45倍和34-53倍。WALINET的性能优于HLSVD+L2,提供:(1)更多的脂质去除% lower NRMSE; (2) better metabolite signal preservation with 71% lower NRMSE in simulated data; 155% higher SNR and 50% lower CRLB in in vivo data. Metabolic maps obtained by WALINET in healthy subjects and patients show better gray-/white-matter contrast with more visible structural details.Conclusions: WALINET has superior performance for nuisance signal removal and metabolite quantification on whole-brain   1 H $$ {}^1mathrm{H} $$ -MRSI compared with conventional state-of-the-art techniques. This represents a new application of deep learning for MRSI processing, with potential for automated high-throughput workflow.
{"title":"WALINET: A water and lipid identification convolutional neural network for nuisance signal removal in \u0000 \u0000 \u0000 \u0000  \u0000 \u0000 1\u0000 \u0000 \u0000 H\u0000 \u0000 $$ {}^1mathrm{H} $$\u0000 MR spectroscopic imaging","authors":"Paul J. Weiser,&nbsp;Georg Langs,&nbsp;Stanislav Motyka,&nbsp;Wolfgang Bogner,&nbsp;Sébastien Courvoisier,&nbsp;Malte Hoffmann,&nbsp;Antoine Klauser,&nbsp;Ovidiu C. Andronesi","doi":"10.1002/mrm.30402","DOIUrl":"10.1002/mrm.30402","url":null,"abstract":"&lt;div&gt;\u0000 \u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Purpose&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;Proton magnetic resonance spectroscopic imaging (&lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;msup&gt;\u0000 &lt;mo&gt; &lt;/mo&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mn&gt;1&lt;/mn&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;/msup&gt;\u0000 &lt;mi&gt;H&lt;/mi&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ {}^1mathrm{H} $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt;-MRSI) provides noninvasive spectral-spatial mapping of metabolism. However, long-standing problems in whole-brain &lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;msup&gt;\u0000 &lt;mo&gt; &lt;/mo&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mn&gt;1&lt;/mn&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;/msup&gt;\u0000 &lt;mi&gt;H&lt;/mi&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ {}^1mathrm{H} $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt;-MRSI are spectral overlap of metabolite peaks with large lipid signal from scalp, and overwhelming water signal that distorts spectra. Fast and effective methods are needed for high-resolution &lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;msup&gt;\u0000 &lt;mo&gt; &lt;/mo&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mn&gt;1&lt;/mn&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;/msup&gt;\u0000 &lt;mi&gt;H&lt;/mi&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ {}^1mathrm{H} $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt;-MRSI to accurately remove lipid and water signals while preserving the metabolite signal. The potential of supervised neural networks for this task remains unexplored, despite their success for other MRSI processing.&lt;/p&gt;\u0000 &lt;/section&gt;\u0000 \u0000 &lt;section&gt;\u0000 \u0000 &lt;h3&gt; Methods&lt;/h3&gt;\u0000 \u0000 &lt;p&gt;We introduce a deep learning method based on a modified Y-NET network for water and lipid removal in whole-brain &lt;span&gt;&lt;/span&gt;&lt;math&gt;\u0000 &lt;semantics&gt;\u0000 &lt;mrow&gt;\u0000 &lt;msup&gt;\u0000 &lt;mo&gt; &lt;/mo&gt;\u0000 &lt;mrow&gt;\u0000 &lt;mn&gt;1&lt;/mn&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;/msup&gt;\u0000 &lt;mi&gt;H&lt;/mi&gt;\u0000 &lt;/mrow&gt;\u0000 &lt;annotation&gt;$$ {}^1mathrm{H} $$&lt;/annotation&gt;\u0000 &lt;/semantics&gt;&lt;/math&gt;-MRSI. The WALINET (WAter and LIpid neural NETwork) was compa","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":"93 4","pages":"1430-1442"},"PeriodicalIF":3.0,"publicationDate":"2024-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11782715/pdf/","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142907369","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"OA","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
MVP-VSASL: measuring MicroVascular Pulsatility using velocity-selective arterial spin labeling
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-29 DOI: 10.1002/mrm.30370
Conan Chen, Ryan A. Barnes, Katherine J. Bangen, Fei Han, Josef Pfeuffer, Eric C. Wong, Thomas T. Liu, Divya S. Bolar
<div> <section> <h3> Purpose</h3> <p>By leveraging the small-vessel specificity of velocity-selective arterial spin labeling (VSASL), we present a novel technique for measuring cerebral MicroVascular Pulsatility named MVP-VSASL.</p> </section> <section> <h3> Theory and Methods</h3> <p>We present a theoretical model relating the pulsatile, cerebral blood flow-driven VSASL signal to the microvascular pulsatility index (<span></span><math> <semantics> <mrow> <mi>PI</mi> </mrow> <annotation>$$ mathrm{PI} $$</annotation> </semantics></math>), a widely used metric for quantifying cardiac-dependent fluctuations. The model describes the dependence of the <span></span><math> <semantics> <mrow> <mi>PI</mi> </mrow> <annotation>$$ mathrm{PI} $$</annotation> </semantics></math> of VSASL signal (denoted <span></span><math> <semantics> <mrow> <msub> <mi>PI</mi> <mi>VS</mi> </msub> </mrow> <annotation>$$ {mathrm{PI}}_{mathrm{VS}} $$</annotation> </semantics></math>) on bolus duration <span></span><math> <semantics> <mrow> <mi>τ</mi> </mrow> <annotation>$$ tau $$</annotation> </semantics></math> (an adjustable VSASL sequence parameter) and provides guidance for selecting a value of <span></span><math> <semantics> <mrow> <mi>τ</mi> </mrow> <annotation>$$ tau $$</annotation> </semantics></math> that maximizes the SNR of the <span></span><math> <semantics> <mrow> <msub> <mi>PI</mi> <mi>VS</mi> </msub> </mrow> <annotation>$$ {mathrm{PI}}_{mathrm{VS}} $$</annotation> </semantics></math> measurement. The model predictions were assessed in humans using data acquired with retrospectively cardiac-gated VSASL sequences over a broad range of <span></span><math> <semantics> <mrow> <mi>τ</mi>
目的:通过利用速度选择性动脉自旋标记(VSASL)的小血管特异性,我们提出了一种测量脑微血管搏动性的新技术--MVP-VSASL:我们提出了一个理论模型,该模型将搏动性、脑血流驱动的 VSASL 信号与微血管搏动指数(PI $$ mathrm{PI} $$)相关联,微血管搏动指数是一种广泛使用的量化心脏依赖性波动的指标。该模型描述了 VSASL 信号的 PI $mathrm{PI} $$ (表示为 PI VS $$ {mathrm{PI}}_{mathrm{VS}} $$)对栓剂持续时间 τ $ $ tau $$(可调节的 VSASL 序列参数)的依赖性,并为选择能使 PI VS $$ {mathrm{PI}}_{mathrm{VS}} SNR 最大化的 τ $ $ tau $$值提供指导。$$ 测量值。利用回溯性心脏门控 VSASL 序列获取的数据,在广泛的 τ $$ tau $$ 值范围内对人体模型预测进行了评估。体内测量还被用来证明全脑体素搏动性映射的可行性,评估 PI VS $$ {mathrm{PI}}_{mathrm{VS}} 的会期内可重复性。$$ ,并说明该方法在探索与年龄相关性方面的潜力:理论模型与灰质相关区域的经验数据非常吻合(六个受试者的平均 R 2 $$ {mathrm{R}}^2 $$ 值为 0.898 ± $ $ pm $ $ 0.107)。我们还进一步证明了脉动性测量的极佳会期内重复性(ICC = 0.960 $$ mathrm{ICC}=0.960 $$ , p 0.001 $$ p)以及与年龄相关的潜在特征(r = 0.554 $$ r=0.554 $$ , p = 0.021 $$ p=0.021 $$):我们介绍了一种新颖的、基于 VSASL 的脑微血管搏动性技术,该技术可能有助于研究微血管损伤引起的认知障碍。
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引用次数: 0
Diffusion time effects over the adult lifespan indicates persistent zone-specific microstructural alterations in the human prostate with aging. 扩散时间效应在成人寿命表明持续区域特异性微结构改变在人类前列腺随着年龄的增长。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-29 DOI: 10.1002/mrm.30408
Xiao Ma, Peter Seres, Adam Kinnaird, Christopher Fung, Thorsten Feiweier, Christian Beaulieu

Purpose: The purpose of this study was to investigate microstructural changes in the aging adult prostate by comparing the effects of varying diffusion times using diffusion MRI, and to provide an age-related benchmark for future prostate cancer studies.

Methods: The prostates of normal male volunteers (n = 70, 19-69 years) were scanned at 3 T with an oscillating gradient spin echo (OGSE: 6 ms), pulsed gradient spin echo (PGSE: 40 ms) and pulsed gradient stimulated echo (PGSTE: 100 ms), and anatomical T2-weighted image. Volume and mean diffusivity (MD) were measured in the peripheral (PZ) and transition zones (TZ), which were assessed versus age.

Results: PZ and TZ showed quadratic age trajectories for all diffusion scans, with MD decreasing from 19 years to a minimum ˜30-40 years followed by a greater increase at older ages. Short (OGSE) and medium (PGSE) diffusion time MD had similar age trajectories, whereas long diffusion time (PGSTE) MD was significantly lower, particularly in PZ (22%). MD difference (∆MD) of OGSE-PGSTE and PGSE-PGSTE showed significant positive linear correlations with age for both PZ (larger slope) and TZ, resulting in ˜3.3x (PZ) and 1.8x (TZ) greater ∆MD from 19 to 69 years. MD and ∆MD versus age relationships differed from volume, which conversely had greater proportional growth in TZ than PZ.

Conclusion: The diffusion time effects suggest age-related microstructural changes consistent with development of persistently larger cell dimensions mainly in the prostate peripheral zone over the adult lifespan. This normative data can be used for comparison to prostate cancer factoring in age.

目的:本研究的目的是通过比较扩散MRI不同扩散时间对衰老成人前列腺微结构变化的影响,并为未来前列腺癌研究提供与年龄相关的基准。方法:采用振荡梯度自旋回波(OGSE: 6 ms)、脉冲梯度自旋回波(PGSE: 40 ms)和脉冲梯度刺激回波(PGSTE: 100 ms)扫描正常男性志愿者(n = 70, 19 ~ 69岁)的前列腺,并进行解剖t2加权成像。测量外周区(PZ)和过渡区(TZ)的体积和平均扩散率(MD),并根据年龄进行评估。结果:PZ和TZ在所有扩散扫描中都显示出二次年龄轨迹,MD从19岁下降到最小~ 30-40岁,随后随着年龄的增长而增加。短(OGSE)和中(PGSE)扩散时间MD具有相似的年龄轨迹,而长扩散时间(PGSTE) MD明显较低,特别是在PZ(22%)。在PZ(坡度较大)和TZ中,OGSE-PGSTE和PGSE-PGSTE的MD差异(∆MD)与年龄呈显著的线性正相关,导致19 ~ 69岁的∆MD增大~ 3.3倍(PZ)和1.8倍(TZ)。MD和∆MD与年龄的关系不同于体积,相反,TZ比PZ有更大的比例增长。结论:扩散时间效应提示年龄相关的微结构变化与前列腺外周区细胞尺寸持续变大的发展相一致。这一标准数据可用于与前列腺癌的年龄因素进行比较。
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引用次数: 0
129Xe Image Processing Pipeline: An open-source, graphical user interface application for the analysis of hyperpolarized 129Xe MRI
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-27 DOI: 10.1002/mrm.30417
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引用次数: 0
3D deuterium metabolic imaging (DMI) of the human liver at 7 T using low-rank and subspace model-based reconstruction. 基于低秩和子空间模型重建的7 T人体肝脏三维氘代谢成像(DMI)
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-22 DOI: 10.1002/mrm.30395
Kyung Min Nam, Ayhan Gursan, Nam G Lee, Dennis W J Klomp, Jannie P Wijnen, Jeanine J Prompers, Arjan D Hendriks, Alex A Bhogal

Purpose: To implement a low-rank and subspace model-based reconstruction for 3D deuterium metabolic imaging (DMI) and compare its performance against Fourier transform-based (FFT) reconstruction in terms of spectral fitting reliability.

Methods: Both reconstruction methods were applied on simulated and experimental DMI data. Numerical simulations were performed to evaluate the effect of increasing acceleration factors. The impact on spectral fitting results, SNR, and the overall normalized root mean square error (NRMSE) compared to ground-truth data were calculated. A comparative analysis was performed on DMI data acquired from the human liver, including both natural abundance and post-deuterated glucose intake data at 7 T.

Results: Simulation showed the Cramer-Rao lower bound [%] of water, glucose, sum of glutamate and glutamine (Glx), and lipid signals for the low-rank and subspace model-based reconstruction at R = 1.0 was 12.4, 14.7, 17.3, and 11.0 times lower than FFT. At R = 1.1, NRMSE was 1.4%, 1.3%, 0.8%, and 4.2% lower for the water, glucose, Glx, and lipid, respectively, compared to FFT. However, the NRMSE of the Glx and lipid increased by 0.4% and 3.2% at R = 1.3. For the in vivo DMI experiment, SNR was 2.5-3.0 times higher compared to FFT. The fitted amplitude of water and glucose peaks showed Cramer-Rao lower bound [%] values that were approximately 2.3 times lower than FFT.

Conclusion: Simulations and in vivo experiments on the human liver demonstrate that low-rank and subspace model-based reconstruction with undersampled data mitigates noise and enhances spectral fitting quality.

目的:实现基于低秩和子空间模型的三维氘代谢成像(DMI)重建,并将其与基于傅里叶变换(FFT)重建的频谱拟合可靠性进行比较。方法:两种重建方法分别应用于模拟和实验DMI数据。通过数值模拟,评价了增大加速度因子的影响。计算了对光谱拟合结果、信噪比和总体归一化均方根误差(NRMSE)的影响。对从人类肝脏获得的DMI数据进行了比较分析,包括7 T时的天然丰度和氘化后葡萄糖摄入数据。结果:模拟显示,在R = 1.0时,基于低秩和子空间模型的重建的水、葡萄糖、谷氨酸和谷氨酰胺(Glx)和脂质信号的crmer - rao下限[%]比FFT低12.4倍、14.7倍、17.3倍和11.0倍。在R = 1.1时,与FFT相比,水、葡萄糖、Glx和脂质的NRMSE分别降低1.4%、1.3%、0.8%和4.2%。然而,在R = 1.3时,Glx和脂质的NRMSE分别增加了0.4%和3.2%。在体内DMI实验中,信噪比比FFT高2.5-3.0倍。水和葡萄糖峰的拟合幅度显示Cramer-Rao下限[%]值,比FFT低约2.3倍。结论:人体肝脏的模拟和体内实验表明,基于低秩和子空间模型的低采样数据重建可以减轻噪声,提高频谱拟合质量。
{"title":"3D deuterium metabolic imaging (DMI) of the human liver at 7 T using low-rank and subspace model-based reconstruction.","authors":"Kyung Min Nam, Ayhan Gursan, Nam G Lee, Dennis W J Klomp, Jannie P Wijnen, Jeanine J Prompers, Arjan D Hendriks, Alex A Bhogal","doi":"10.1002/mrm.30395","DOIUrl":"https://doi.org/10.1002/mrm.30395","url":null,"abstract":"<p><strong>Purpose: </strong>To implement a low-rank and subspace model-based reconstruction for 3D deuterium metabolic imaging (DMI) and compare its performance against Fourier transform-based (FFT) reconstruction in terms of spectral fitting reliability.</p><p><strong>Methods: </strong>Both reconstruction methods were applied on simulated and experimental DMI data. Numerical simulations were performed to evaluate the effect of increasing acceleration factors. The impact on spectral fitting results, SNR, and the overall normalized root mean square error (NRMSE) compared to ground-truth data were calculated. A comparative analysis was performed on DMI data acquired from the human liver, including both natural abundance and post-deuterated glucose intake data at 7 T.</p><p><strong>Results: </strong>Simulation showed the Cramer-Rao lower bound [%] of water, glucose, sum of glutamate and glutamine (Glx), and lipid signals for the low-rank and subspace model-based reconstruction at R = 1.0 was 12.4, 14.7, 17.3, and 11.0 times lower than FFT. At R = 1.1, NRMSE was 1.4%, 1.3%, 0.8%, and 4.2% lower for the water, glucose, Glx, and lipid, respectively, compared to FFT. However, the NRMSE of the Glx and lipid increased by 0.4% and 3.2% at R = 1.3. For the in vivo DMI experiment, SNR was 2.5-3.0 times higher compared to FFT. The fitted amplitude of water and glucose peaks showed Cramer-Rao lower bound [%] values that were approximately 2.3 times lower than FFT.</p><p><strong>Conclusion: </strong>Simulations and in vivo experiments on the human liver demonstrate that low-rank and subspace model-based reconstruction with undersampled data mitigates noise and enhances spectral fitting quality.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2024-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142877406","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Optimized MR pulse sequence for high-resolution brain 3D-T1ρ mapping with weighted spin-lock acquisitions 优化MR脉冲序列用于高分辨率脑3D-T1ρ映射与加权自旋锁定获取。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-22 DOI: 10.1002/mrm.30412
Marcelo V. W. Zibetti, Rajiv Menon, Hector L. De Moura, Mahesh B. Keerthivasan, Ravinder R. Regatte

Purpose

To implement and evaluate the feasibility of brain spin–lattice relaxation in the rotating frame (T1ρ) mapping using a novel optimized pulse sequence that incorporates weighted spin-lock acquisitions, enabling high-resolution three-dimensional (3D) mapping.

Methods

The optimized variable flip-angle framework, previously proposed for knee T1ρ mapping, was enhanced by integrating weighted spin-lock acquisitions. This strategic combination significantly boosts signal-to-noise ratio (SNR) while reducing data acquisition time, facilitating high-resolution 3D-T1ρ mapping of the brain. The proposed sequence was compared with magnetization-prepared angle-modulated partitioned k-space spoiled gradient-echo sequence snapshots (MAPSS).

Results

The newly developed pulse sequence, tested for brain 3D-T1ρ mapping for the first time, obtained maps in 4 min with quality comparable to a 20-min MAPSS sequence. Specifically, the voxel-wise median absolute percentage difference between these MR sequences at a resolution of 0.9 × 0.9 × 3 mm3 is 13.1%. If high resolution is desired, with a voxel size of 0.5 × 0.5 × 3 mm3, the new sequence can acquire T1ρ maps in 8 min, surpassing a 20-min (and resolution of 0.9 × 0.9 × 3 mm3) MAPSS in SNR. The weighted spin-lock acquisition combined with optimized variable flip angle improved the SNR over optimized variable flip angle alone by about 28%.

Conclusion

Compared with the 20-min MAPSS sequence for brain T1ρ mapping, the proposed learned high-resolution 3D pulse sequence simultaneously achieved a 2.3-fold improvement in effective (3.2-fold nominal) spatial resolution, a 1.1-fold improvement in SNR, and a 2.5-fold reduction in scan time.

目的:利用一种新的优化脉冲序列,结合加权自旋锁定获取,实现并评估旋转框架(T1ρ)映射中脑自旋晶格松弛的可行性,从而实现高分辨率三维(3D)映射。方法:优化的可变翻转角度框架,先前提出的膝关节T1ρ映射,加强整合加权自旋锁定获取。这种战略组合显著提高了信噪比(SNR),同时减少了数据采集时间,促进了大脑的高分辨率3D-T1ρ映射。将该序列与磁化制备的角调制分区k空间破坏梯度回波序列快照(MAPSS)进行了比较。结果:新开发的脉冲序列首次用于脑3D-T1ρ制图,在4分钟内获得了与20分钟MAPSS序列相当的图像质量。具体来说,在分辨率为0.9 × 0.9 × 3mm3的情况下,这些MR序列之间的体素绝对百分比中位数差异为13.1%。如果需要高分辨率,当体素大小为0.5 × 0.5 × 3mm3时,新序列可以在8分钟内获得T1ρ图,在信噪比上超过20分钟(分辨率为0.9 × 0.9 × 3mm3)的MAPSS。加权自旋锁定采集与优化的可变翻转角相结合,比单独优化的可变翻转角提高了约28%的信噪比。结论:与20分钟脑T1ρ映射的MAPSS序列相比,所提出的学习高分辨率3D脉冲序列同时实现了2.3倍的有效空间分辨率提高(名义上是3.2倍),1.1倍的信噪比提高,2.5倍的扫描时间缩短。
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引用次数: 0
ORACLE: An analytical approach for T1, T2, proton density, and off-resonance mapping with phase-cycled balanced steady-state free precession ORACLE:用相循环平衡稳态自由进动进行T1, T2,质子密度和非共振映射的分析方法。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2024-12-22 DOI: 10.1002/mrm.30388
Nils M. J. Plähn, Yasaman Safarkhanlo, Berk C. Açikgöz, Adèle L. C. Mackowiak, Piotr Radojewski, Gabriele Bonanno, Eva S. Peper, Rahel Heule, Jessica A. M. Bastiaansen
<div> <section> <h3> Purpose</h3> <p>To develop and validate a novel analytical approach simplifying <span></span><math> <semantics> <mrow> <msub> <mi>T</mi> <mn>1</mn> </msub> </mrow> <annotation>$$ {T}_1 $$</annotation> </semantics></math>, <span></span><math> <semantics> <mrow> <msub> <mi>T</mi> <mn>2</mn> </msub> </mrow> <annotation>$$ {T}_2 $$</annotation> </semantics></math>, proton density (PD), and off-resonance <span></span><math> <semantics> <mrow> <mi>Δ</mi> <mi>f</mi> </mrow> <annotation>$$ Delta f $$</annotation> </semantics></math> quantifications from phase-cycled balanced steady-state free precession (bSSFP) data. Additionally, to introduce a method to correct aliasing effects in undersampled bSSFP profiles.</p> </section> <section> <h3> Theory and Methods</h3> <p>Off-resonant-encoded analytical parameter quantification using complex linearized equations (ORACLE) provides analytical solutions for bSSFP profiles. which instantaneously quantify <span></span><math> <semantics> <mrow> <msub> <mi>T</mi> <mn>1</mn> </msub> </mrow> <annotation>$$ {T}_1 $$</annotation> </semantics></math>, <span></span><math> <semantics> <mrow> <msub> <mi>T</mi> <mn>2</mn> </msub> </mrow> <annotation>$$ {T}_2 $$</annotation> </semantics></math>, proton density (PD), and <span></span><math> <semantics> <mrow> <mi>Δ</mi> <mi>f</mi> </mrow> <annotation>$$ Delta f $$</annotation> </semantics></math>. An aliasing correction formalism was derived to allow undersampling of bSSFP profiles. ORACLE was used to quantify <span></span><math> <semantics> <mrow> <msub> <mi>T</mi> <mn>1</mn> </msub>
目的:开发并验证一种新的分析方法,简化从相循环平衡稳态自由进动(bSSFP)数据中量化t1 $$ {T}_1 $$、t2 $$ {T}_2 $$、质子密度(PD)和非共振Δ f $$ Delta f $$。此外,介绍了一种校正欠采样bSSFP轮廓中混叠效应的方法。理论与方法:利用复线性化方程(ORACLE)对非共振编码的分析参数进行量化,为bSSFP剖面提供了解析解。它可以即时量化t1 $$ {T}_1 $$, t2 $$ {T}_2 $$,质子密度(PD)和Δ f $$ Delta f $$。推导了一种允许bSSFP剖面欠采样的混叠校正形式。基于全采样(N = 20 $$ N=20 $$)的幻影和10名健康受试者的数值模拟和3T MRI实验bSSFP谱,使用ORACLE对t1 $$ {T}_1 $$、t2 $$ {T}_2 $$、PD、t1 $$ {T}_1 $$ / t2 $$ {T}_2 $$和Δ f $$ Delta f $$进行量化。将获得的值与同一扫描会话中的参考扫描进行比较。在数值模拟和人脑的次采样(N = 4 $$ N=4 $$) bSSFP剖面中验证了混叠校正。结果:ORACLE定量结果与模拟输入值和模拟参考值吻合良好(R2 = 0.99)。在人脑中,t1 $$ {T}_1 $$和t2 $$ {T}_2 $$量化方法与参考方法相比,变异系数低于2.9% and 3.9%, biases of 182 and 16.6 ms, and mean white-matter values of 642 and 51 ms using ORACLE. The Δ f $$ Delta f $$ quantification differed less than 3 Hz between both methods. PD and T 1 $$ {T}_1 $$ maps had comparable histograms. The Λ $$ varLambda $$ maps effectively identified cerebrospinal fluid. Aliasing correction removed aliasing-related quantification errors in undersampled bSSFP profiles, significantly reducing scan time.Conclusion: ORACLE enables simplified and rapid quantification of T 1 $$ {T}_1 $$ , T 2 $$ {T}_2 $$ , PD, and Δ f $$ Delta f $$ from phase-cycled bSSFP profiles, reducing acquisition time and eliminating biomarker maps' coregistration issues.
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引用次数: 0
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Magnetic Resonance in Medicine
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