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Spectral Representation of Neurochemicals With Phase, Frequency Offset, and Lineshape Invariance: Application to JPRESS for In Vivo Concentration and T2 Mapping by Deep Learning. 具有相位、频率偏移和线形不变性的神经化学物质的光谱表示:通过深度学习在JPRESS中用于体内浓度和T2映射的应用。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-07 DOI: 10.1002/mrm.70291
Yan Zhang, Jun Shen

Purpose: Using artificial intelligence neural networks to generate a representation that maps the input directly to neurochemical concentrations and metabolite-level average transverse relaxation times (T2).

Methods: The proposed model used time-domain JPRESS data as input and was trained to be invariant to phase shifts, frequency offsets, and lineshape variations, using computer-synthesized data without prior knowledge of in vivo metabolite concentration distributions. TE-specific representations were generated using a combination of WaveNet and gated recurrent units (GRUs) and integrated into a unified JPRESS representation.

Results: By focusing solely on target metabolite signals, the model effectively filtered out background signals, including spectral artifacts and unregistered metabolites. The predicted concentrations and metabolite-level average T2 values were consistent with those reported in the literature. The model demonstrated robustness to phase shifts, frequency offsets, and line broadening. Additionally, it was capable of detecting low-concentration neurochemicals, such as gamma-aminobutyric acid (GABA), without spectral editing.

Conclusion: This study demonstrates that deep learning can be used for automatically quantifying both metabolite concentrations and transverse relaxation times with high practical viability.

目的:利用人工智能神经网络生成一种表征,将输入直接映射到神经化学物质浓度和代谢物水平的平均横向松弛时间(T2)。方法:所提出的模型使用时域JPRESS数据作为输入,并使用计算机合成的数据进行训练,使其对相移、频率偏移和线形变化保持不变,而无需事先了解体内代谢物浓度分布。使用WaveNet和门控循环单元(gru)的组合生成te特定的表示,并集成到统一的JPRESS表示中。结果:通过只关注目标代谢物信号,该模型有效滤除了背景信号,包括光谱伪影和未注册代谢物。预测浓度和代谢物水平平均T2值与文献报道一致。该模型对相移、频偏和线展宽具有鲁棒性。此外,它能够检测低浓度的神经化学物质,如γ -氨基丁酸(GABA),而无需谱编辑。结论:本研究表明,深度学习可用于代谢物浓度和横向松弛时间的自动量化,具有较高的实用可行性。
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引用次数: 0
Ultrafast Blood T1 Measurement Using Golden Angle Rotated Spiral k-t Sparse Parallel Imaging (GASSP): Evaluations in Both Pre- and Post-Contrast Conditions. 使用黄金角旋转螺旋k-t稀疏平行成像(GASSP)的超快血液T1测量:在前后对比条件下的评估。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-06 DOI: 10.1002/mrm.70286
Zechen Xu, Feng Xu, Qin Qin, Dan Zhu

Purpose: Blood T1 is a key parameter for hemodynamic quantification in both non-contrast- and contrast-enhanced imaging. Individual vessel T1 has been measured using a modified Look-Locker scheme with multi-shot EPI or FLASH in high spatial resolution, requiring ∼1 min. Here, by exploiting the temporal sparsity from the excessive number of inversion delays, we apply Golden Angle rotated Spiral k-t Sparse Parallel imaging (GASSP) to enable blood T1 measurement in a single shot of 10 s.

Methods: The pulse sequence with single-shot GASSP reconstruction was developed for T1 measurement from the internal jugular vein (IJV) with 1 × 1 mm2 in-plane resolution. On nine healthy volunteers, the single-shot GASSP was compared to the segmented EPI readout and was repeated to assess its intra-scan reproducibility. Another experiment was performed on three patients, during which the 10 s GASSP was obtained at different time points prior to and following the Gadolinium (Gd) administration to assess dynamic changes in blood T1.

Results: The blood T1 values measured with the highly undersampled GASSP method were strongly correlated (r = 0.83) with those using the multi-shot EPI readout and exhibited high reproducibility (r = 0.88) within the session. The baseline IJV T1 values measured were 1700-2000 ms. Following the Gd injection, the T1 values of IJVs gradually recovered from ∼300-400 to ∼500 ms within 10-15 min.

Conclusion: The feasibility of an ultrafast blood T1 measurement was demonstrated with high spatial resolution in a single shot of 10 s, applicable to both pre- and post-contrast conditions.

目的:血液T1是非对比和增强成像中血流动力学定量的关键参数。单个血管T1使用改进的Look-Locker方案进行测量,该方案具有高空间分辨率的多镜头EPI或FLASH,需要约1分钟。在这里,通过利用过多的反演延迟的时间稀疏性,我们应用黄金角旋转螺旋k-t稀疏平行成像(GASSP)在10秒的单次拍摄中实现血液T1测量。方法:建立单次GASSP重建脉冲序列,以1 × 1 mm2平面分辨率测量颈内静脉T1。在9名健康志愿者中,将单次GASSP与分段EPI读数进行比较,并进行重复以评估其扫描内再现性。另外对3例患者进行实验,在给药前后不同时间点测定10 s GASSP,评估血液T1的动态变化。结果:高欠采样GASSP法测量的血液T1值与使用多针EPI读数的血液T1值具有强相关性(r = 0.83),并且在治疗期间具有高重复性(r = 0.88)。测量的IJV T1基线值为1700-2000 ms。注射Gd后,IJVs的T1值在10-15 min内从~ 300-400 ms逐渐恢复到~ 500 ms。结论:证明了一种10 s单镜头高空间分辨率的超快速血液T1测量方法的可行性,适用于对比前和对比后的条件。
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引用次数: 0
MoCo + ROVir: Synergy Between Respiratory Motion Compensation and Cardiac Receive Region Focusing for Cardiac MRI. MoCo + ROVir:心脏MRI呼吸运动补偿与心脏接收区聚焦的协同作用。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-05 DOI: 10.1002/mrm.70280
Zheyuan Hu, Hsu-Lei Lee, Tianle Cao, Takegawa Yoshida, Lingceng Ma, J Paul Finn, Kim-Lien Nguyen, Anthony G Christodoulou

Purpose: To improve cardiac motion representation and reduce artifacts for cardiac- and respiratory-resolved imaging through a synergistic combination of retrospective cardiac phased array RF focusing and rigid respiratory motion compensation (MoCo).

Methods: We incorporated cardiac receive focusing using region-optimized virtual coils (ROVir) and MoCo into cardiac- and respiratory-resolved low-rank tensor (LRT) reconstruction, hypothesizing that the combination of MoCo + ROVir would prioritize the LRT representation of cardiac motion over respiratory motion. We compared LRT, MoCo-LRT, ROVir-LRT, and the proposed MoCo + ROVir-LRT reconstructions of retrospective data from N = 24 pediatric patients with congenital heart disease (CHD) scanned at 3.0 T using ROCK-MUSIC. Technical evaluation metrics included the proportion of cardiac-to-respiratory motion energy in self-gating lines, cardiac motion priority in the temporal basis, flickering energy, and edge sharpness in end-expiratory cardiac cine. Reconstructed cardiac cines were scored by two expert image readers.

Results: MoCo + ROVir significantly increased the proportion of cardiac-to-respiratory motion energy in self-gating lines (p < 0.001) and prioritized cardiac motion in the temporal basis (p < 0.001). MoCo + ROVir reduced flickering energy in cardiac cine images (p < 0.001), sharpened the liver-lung interface (p < 0.001), and improved flickering-specific scores (p = 0.001). Myocardium-blood pool interface sharpness (p = 0.831), cardiac-specific image scores (p = 0.188), and vascular-specific scores (p = 0.901) were not significantly different. Together, these two techniques allowed 3.7-5.2× faster reconstruction times versus LRT-only.

Conclusion: The synergy of MoCo + ROVir successfully prioritized cardiac motion, suppressed respiratory motion, and reduced flickering artifacts, with an added benefit of accelerating reconstruction times. The improved respiratory motion handling may provide an avenue for free-breathing cardiac scans in pediatric patients with CHD.

目的:通过回顾性心脏相控阵射频聚焦和刚性呼吸运动补偿(MoCo)的协同组合,改善心脏运动表征,减少心脏和呼吸分辨率成像的伪影。方法:我们将使用区域优化虚拟线圈(ROVir)和MoCo的心脏接收聚焦纳入心脏和呼吸分辨低秩张量(LRT)重建中,假设MoCo + ROVir的组合将优先考虑心脏运动的LRT表示而不是呼吸运动。我们比较了LRT、MoCo-LRT、ROVir-LRT和建议的MoCo + ROVir-LRT重建的N = 24例儿童先天性心脏病(CHD)患者在3.0 T时使用ROCK-MUSIC扫描的回顾性数据。技术评价指标包括自门控线中心-呼吸运动能量的比例、时间基础上的心脏运动优先级、闪烁能量和呼气末心脏影像的边缘清晰度。重建的心脏影像由两位专业图像阅读者评分。结果:MoCo + ROVir显著增加了自门控线中心脏-呼吸运动能量的比例(p)结论:MoCo + ROVir的协同作用成功地优先了心脏运动,抑制了呼吸运动,减少了闪烁伪影,并具有加速重建时间的额外好处。改善呼吸运动处理可能为小儿冠心病患者的自由呼吸心脏扫描提供途径。
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引用次数: 0
Automated Coregistered Segmentation for Volumetric Analysis of Multiparametric Renal MRI. 多参数肾脏MRI体积分析的自动共配分割。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-04 DOI: 10.1002/mrm.70288
Aya Ghoul, Cecilia Liang, Isabelle Loster, Lavanya Umapathy, Bernd Kühn, Petros Martirosian, Ferdinand Seith, Sergios Gatidis, Thomas Küstner

Purpose: This study aims to develop and evaluate a fully automated deep learning-driven postprocessing pipeline for multiparametric renal MRI, enabling accurate kidney alignment, segmentation, and quantitative feature extraction within a single efficient workflow.

Methods: Our method has three main stages. First, a segmentation network delineates renal structures in high-contrast images. Next, a deep learning-based pairwise image registration algorithm maps the multiparametric image series to a common target and transfers the predicted annotations between the multiparametric images. Finally, clinically relevant quantitative parameters are extracted through region-specific assessment of renal structure and function based on the aligned and segmented multiparametric data. We used five-fold cross-validation to compare the segmentation outcomes and extracted features with manual analyses in 24 patients with prostate cancer or neuroendocrine tumors and 10 healthy subjects, each undergoing repeated scans.

Results: Our automated pipeline achieved high agreement with expert kidney segmentation while delivering significant alignment improvements through registration. Volumetric analysis showed a strong correlation (r > $$ > $$ 0.9) with manual results, and feature extraction demonstrated high intraclass correlation coefficients with minimal bias. The complete processing pipeline, encompassing coregistration, segmentation, and feature extraction, required approximately 15 s per scan from raw input to final quantitative output.

Conclusion: The study establishes a reliable automated pipeline for renal multiparametric MRI postprocessing. The achieved accuracy and efficiency can support improved diagnosis and treatment planning for patients with kidney disease.

目的:本研究旨在开发和评估用于多参数肾脏MRI的全自动深度学习驱动的后处理流程,在单一高效的工作流程中实现准确的肾脏对齐,分割和定量特征提取。方法:我们的方法有三个主要阶段。首先,分割网络在高对比度图像中描绘肾脏结构。接下来,基于深度学习的成对图像配准算法将多参数图像序列映射到共同目标,并在多参数图像之间传输预测的注释。最后,基于对齐和分割的多参数数据,通过对肾脏结构和功能的区域特异性评估,提取临床相关的定量参数。我们对24名前列腺癌或神经内分泌肿瘤患者和10名健康受试者进行了重复扫描,使用五倍交叉验证来比较分割结果和提取特征与人工分析。结果:我们的自动化管道与专家肾脏分割高度一致,同时通过注册提供显着的对齐改进。体积分析显示与人工结果有很强的相关性(r > $$ > $$ 0.9),特征提取显示出具有最小偏差的高类内相关系数。完整的处理流程,包括共配准、分割和特征提取,从原始输入到最终定量输出,每次扫描大约需要15秒。结论:本研究为肾脏多参数MRI后处理建立了可靠的自动化流水线。获得的准确性和效率可以支持改善肾脏疾病患者的诊断和治疗计划。
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引用次数: 0
Evidence of Incoherent Cerebrospinal Fluid Flow in the Human Brain From Multidimensional MRI. 多维MRI显示人脑脑脊液流动不连贯的证据
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-04 DOI: 10.1002/mrm.70290
Chenyang Li, Yulin Ge, Jiangyang Zhang

Purpose: The human brain contains multiple fluid types, including blood, cerebrospinal fluid (CSF), and tissue water. While intravoxel incoherent motion (IVIM) imaging has been used to examine microvascular perfusion, evidence on incoherent flows of CSF is emerging. This study aims to develop in vivo multidimensional MRI methods to investigate potential contributions of CSF in the IVIM regime.

Method: T1-Diffusion (T1-D) and T2-Diffusion (T2-D) MRI data were acquired from 10 healthy subjects to investigate the relaxivity and diffusion signatures of incoherent fluid flows in the brain. Based on the T1-D and T2-D results, T1/T2 selective IVIM protocols were developed to map incoherent CSF flows in the human brains.

Results: T1-D and T2-D MRI detected incoherent CSF flow in the brain subarachnoid space. Results from four different relaxation selective IVIM methods further support incoherent CSF flows in these regions.

Conclusion: We have shown the feasibility of using T1-D and T2-D MRI within the low b-value regime to probe the heterogeneity of IVIM flow components. Designed based on the 2D MRI spectra, relaxation selective 1D IVIM acquisition can be obtained within clinically feasible time frame.

目的:人脑含有多种类型的液体,包括血液、脑脊液(CSF)和组织水。虽然体素内非相干运动(IVIM)成像已用于检查微血管灌注,但脑脊液非相干流动的证据正在出现。本研究旨在发展体内多维MRI方法来研究脑脊液在IVIM方案中的潜在贡献。方法:采集10例健康受试者的t1 -弥散(T1-D)和t2 -弥散(T2-D) MRI数据,研究脑内非相干流体流动的弛豫和弥散特征。基于T1- d和T2- d结果,我们开发了T1/T2选择性IVIM方案来绘制人脑中不连贯的脑脊液流。结果:MRI T1-D、T2-D检测到脑蛛网膜下腔脑脊液不连贯血流。四种不同的松弛选择性IVIM方法的结果进一步支持这些区域的脑脊液非相干流动。结论:我们已经证明了在低b值范围内使用T1-D和T2-D MRI来探测IVIM血流成分异质性的可行性。基于二维MRI谱的设计,可以在临床可行的时间框架内获得松弛选择性一维IVIM。
{"title":"Evidence of Incoherent Cerebrospinal Fluid Flow in the Human Brain From Multidimensional MRI.","authors":"Chenyang Li, Yulin Ge, Jiangyang Zhang","doi":"10.1002/mrm.70290","DOIUrl":"https://doi.org/10.1002/mrm.70290","url":null,"abstract":"<p><strong>Purpose: </strong>The human brain contains multiple fluid types, including blood, cerebrospinal fluid (CSF), and tissue water. While intravoxel incoherent motion (IVIM) imaging has been used to examine microvascular perfusion, evidence on incoherent flows of CSF is emerging. This study aims to develop in vivo multidimensional MRI methods to investigate potential contributions of CSF in the IVIM regime.</p><p><strong>Method: </strong>T<sub>1</sub>-Diffusion (T<sub>1</sub>-D) and T<sub>2</sub>-Diffusion (T<sub>2</sub>-D) MRI data were acquired from 10 healthy subjects to investigate the relaxivity and diffusion signatures of incoherent fluid flows in the brain. Based on the T<sub>1</sub>-D and T<sub>2</sub>-D results, T<sub>1</sub>/T<sub>2</sub> selective IVIM protocols were developed to map incoherent CSF flows in the human brains.</p><p><strong>Results: </strong>T<sub>1</sub>-D and T<sub>2</sub>-D MRI detected incoherent CSF flow in the brain subarachnoid space. Results from four different relaxation selective IVIM methods further support incoherent CSF flows in these regions.</p><p><strong>Conclusion: </strong>We have shown the feasibility of using T<sub>1</sub>-D and T<sub>2</sub>-D MRI within the low b-value regime to probe the heterogeneity of IVIM flow components. Designed based on the 2D MRI spectra, relaxation selective 1D IVIM acquisition can be obtained within clinically feasible time frame.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146119397","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Respiratory Motion-Corrected Model-Based 3D Water-Fat MRA of the Thorax at 0.55 T. 0.55 T时胸腔基于呼吸运动校正模型的三维水-脂肪磁共振成像。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-04 DOI: 10.1002/mrm.70285
Robert Stoll, Christoph Kolbitsch, Michaela Schmidt, Marcel Dominik Nickel, Tobias Schaeffter, Daniel Giese

Purpose: The goal of this study was to develop a 5-min 3D MRA acquisition at 0.55 T with predictable scan time, 100% data efficiency, and robust water-fat separation.

Methods: For full data efficiency, the proposed method combined self-gating with retrospective motion correction while ensuring a predictable 5-min scan time. Water-fat separation was implemented using a model-based Dixon reconstruction. Evaluation in 18 volunteers compared results to navigator-gated reference scans with nominal scan times of 5 and 10 min via a Likert scale blinded expert rating. Susceptibility to irregular breathing patterns was also analyzed.

Results: The expert rating for image quality was 4.22 for the proposed method, 3.89 for the 5-min navigator-gated scan and 4.43 for the 10-min navigator-gated scan. Ranking the three methods revealed moderate inter-rater reliability of 0.46, suggesting only minor differences. While navigator-gated acquisitions deviated from the expected scan time by -2.26 to 2.86 min and -3.91 to 4.54 min for the 5- and 10-min protocols respectively, the proposed method deviated only by -0.17 to 0.45 min. The self-gated method further avoided saturation artifacts from the cross-beam navigator, allowing better distinction of the right pulmonary veins. Image quality for the proposed method was also less susceptible to irregular breathing patterns.

Conclusion: Whole-thorax MRA acquisitions with water-fat separation and predictable scan times were successfully acquired in 18 volunteers at 0.55 T. The proposed method demonstrated on average better image quality than navigator-gated acquisitions of the same nominal scan time while mitigating limitations of prospective navigator gating.

目的:本研究的目标是开发一种0.55 T的5分钟3D MRA采集方法,具有可预测的扫描时间、100%的数据效率和稳健的水脂分离。方法:为了充分提高数据效率,该方法结合了自门控和回顾性运动校正,同时确保了可预测的5分钟扫描时间。采用基于模型的Dixon重建实现水脂分离。对18名志愿者的评估通过李克特量表盲法专家评分,将结果与导航门控参考扫描的名义扫描时间为5分钟和10分钟进行比较。对不规则呼吸模式的易感性也进行了分析。结果:所提方法的图像质量专家评分为4.22,5分钟导航门控扫描为3.89,10分钟导航门控扫描为4.43。对三种方法进行排序,显示出中等程度的信度为0.46,表明差异很小。对于5分钟和10分钟协议,导航门控采集与预期扫描时间的偏差分别为-2.26至2.86分钟和-3.91至4.54分钟,而所提出的方法仅偏离-0.17至0.45分钟。自门控方法进一步避免了交叉波束导航器的饱和伪影,可以更好地区分右肺静脉。该方法的图像质量也不容易受到不规则呼吸模式的影响。结论:在0.55 T下,18名志愿者成功获得了水脂分离和可预测扫描时间的全胸MRA图像。在相同标称扫描时间下,该方法比导航门控获取的图像质量平均更好,同时减轻了预期导航门控的局限性。
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引用次数: 0
Tensor Decomposition-Based Multi-Signal Matrix Pencil Method for Myelin Water Fraction Estimation. 基于张量分解的多信号矩阵铅笔法估计髓磷脂含水量。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-04 DOI: 10.1002/mrm.70283
Deepu Kurian, Eva Alonso-Ortiz, Faheem Arshad, Joseph Suresh Paul

Purpose: To develop a robust method for estimating myelin water fraction (MWF) from multi-echo gradient-recalled echo (mGRE) data under acquisition regimes that limit echo-train length and support higher spatial sampling.

Methods: A tensor decomposition-based multi-signal matrix pencil (T-MP) framework is proposed to incorporate data-driven spatial information from neighboring voxels into MWF estimation. By leveraging the reduced temporal sampling requirements of matrix pencil-based approaches, the method enables stable parameter estimation with fewer echoes compared to conventional iterative fitting techniques. The performance of the proposed method was evaluated using numerical simulations across a range of signal-to-noise ratios and echo spacings, as well as in vivo mGRE datasets acquired at different spatial resolutions with shortened echo trains.

Results: Numerical simulations demonstrate that accurate MWF estimation can be achieved with substantially fewer temporal samples, facilitating acquisition protocols that prioritize spatial encoding. In vivo experiments show that the proposed method provides consistent MWF maps across different spatial resolutions without qualitative degradation. Kernel density analysis reveals improved estimation consistency in both white and gray matter compared with conventional voxel-wise fitting approaches. In addition, the proposed framework substantially reduces per-slice computation time.

Conclusion: A tensor decomposition-based multi-signal matrix pencil method for MWF estimation is presented that integrates spatially informed signal structure while reducing temporal sampling requirements. The proposed framework supports spatially efficient mGRE acquisitions and provides improved robustness and computational efficiency compared to existing voxel-wise approaches.

目的:在限制回波序列长度和支持更高空间采样的采集机制下,开发一种从多回波梯度回忆回波(mGRE)数据中估计髓鞘水分数(MWF)的鲁棒方法。方法:提出一种基于张量分解的多信号矩阵铅笔(T-MP)框架,将邻近体素的数据驱动空间信息整合到MWF估计中。与传统的迭代拟合技术相比,通过利用基于矩阵铅笔的方法减少的时间采样要求,该方法能够实现稳定的参数估计,回声更少。采用不同信噪比和回波间隔的数值模拟,以及在不同空间分辨率下获得的短回波序列的活体mGRE数据集,对该方法的性能进行了评估。结果:数值模拟表明,精确的MWF估计可以用更少的时间样本来实现,这有利于优先考虑空间编码的采集协议。体内实验表明,该方法在不同空间分辨率下提供一致的MWF图,且没有质量退化。核密度分析表明,与传统的体素拟合方法相比,白质和灰质的估计一致性得到了改善。此外,所提出的框架大大减少了每片的计算时间。结论:提出了一种基于张量分解的多信号矩阵铅笔估计MWF方法,该方法集成了空间信息信号结构,同时减少了时间采样要求。与现有的体素方法相比,所提出的框架支持空间高效的mGRE获取,并提供更好的鲁棒性和计算效率。
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引用次数: 0
Combined caLculation of Ultra-high field Biases (CLUB) With Sandwich: Fast, Simultaneous Estimation of 3D B0 and Multi-Channel B1 + Maps at 7 T. 与三明治的超高场偏差联合计算:快速,同时估计7t的3D B0和多通道B1 +地图。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-04 DOI: 10.1002/mrm.70289
Natalia Pato Montemayor, Jocelyn Phillippe, James L Kent, Aaron Hess, Antoine Klauser, Emilie Sleight, Lina Bacha, Tommaso Di Noto, Bénédicte Maréchal, Patrick A Liebig, Jürgen Herrler, Dominik Nickel, Robin M Heidemann, Jean-Philippe Thiran, Tobias Kober, Tom Hilbert, Thomas Yu, Gian Franco Piredda

Purpose: A method for simultaneous mapping of static (B0) and transmit (B1 +) field inhomogeneities at ultra-high field (UHF) was developed and validated. The utility of accelerating the proposed sequence using deep learning (DL) and joint low-rank tensor completion (TxLR) reconstruction methods was evaluated to enable rapid online implementation.

Methods: A 3D sequence, Combined caLculation of UHF Biases (CLUB)-Sandwich, was developed by incorporating a multi-echo readout into the unsaturated segment of the Sandwich B1 + mapping sequence, enabling simultaneous B0 estimation. Data from 11 healthy volunteers were acquired at 7 T. Estimated ΔB0 and B1 + maps were compared with established, separate reference scans. Retrospectively and prospectively undersampled data were reconstructed using TxLR and a DL-based algorithm. The resulting maps were compared with fully sampled data.

Results: CLUB-Sandwich maps showed strong agreement with reference methods. A strong correlation (r > 0.97) and low mean volumetric root mean squared errors were found for both ΔB0 (9.5 ± 1.8 Hz) and absolute B1 + (3.5° ± 0.3°). Both reconstruction methods enabled acquisitions in under 10 s of acquisition time. DL reconstruction was found to be substantially faster (5 s) than the TxLR algorithm (4 min) while producing comparable map quality. Prospective validation confirmed the feasibility of online mapping with acceptable accuracy.

Conclusion: The CLUB-Sandwich method was developed for fast, accurate, and simultaneous ΔB0 and B1 + mapping. When combined with a DL-based reconstruction, the proposed framework provides maps in under 10 s of acquisition time, presenting a feasible solution for rapid online inhomogeneity estimation in UHF applications.

目的:建立并验证了一种超高场(UHF)静态(B0)和发射(B1 +)场非均匀性同时映射的方法。利用深度学习(DL)和联合低秩张量补全(TxLR)重建方法加速所提出序列的效用进行了评估,以实现快速在线实施。方法:通过将多回波读出合并到Sandwich B1 +映射序列的不饱和段,开发了一个三维序列,即联合计算UHF偏差(CLUB)-Sandwich,从而实现同时估计B0。11名健康志愿者的数据于7点采集。估计的ΔB0和B1 +地图进行比较,建立单独的参考扫描。使用TxLR和基于dl的算法对回顾性和前瞻性欠采样数据进行重建。将得到的地图与完全抽样的数据进行比较。结果:CLUB-Sandwich图谱与参考方法吻合较好。ΔB0(9.5±1.8 Hz)和绝对B1 +(3.5°±0.3°)均存在强相关性(r > 0.97)和较低的平均体积均方根误差。两种重建方法都能在不到10秒的采集时间内进行采集。DL重建被发现比TxLR算法(4分钟)快得多(5秒),同时产生相当的地图质量。前瞻性验证证实了在线制图的可行性和可接受的精度。结论:CLUB-Sandwich方法可快速、准确、同时进行ΔB0和B1 +定位。当与基于dl的重构相结合时,该框架在不到10秒的采集时间内提供了地图,为UHF应用中的快速在线非均匀性估计提供了一种可行的解决方案。
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引用次数: 0
Comparison of Signal- and Volume-Based Ventilation-Weighted Assessment Using 3D FLORET UTE MRI in Patients With Various Pulmonary Disease. 基于信号和容积的三维小花UTE MRI通气加权评估在不同肺部疾病患者中的比较
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-03 DOI: 10.1002/mrm.70239
Filip Klimeš, Joseph W Plummer, Andreas Voskrebenzev, Marcel Gutberlet, Marius M Klein, Matthew M Willmering, Alexander M Matheson, Abdullah S Bdaiwi, Frank Wacker, Jason C Woods, Zackary I Cleveland, Laura L Walkup, Jens Vogel-Claussen

Purpose: 3D free-breathing, proton, contrast-agent-free MR methods are increasingly used for pulmonary ventilation-weighted measurements. The methods are split between: (1) signal-based, which rely on lung parenchyma signal changes during respiration, and (2) volume-based that utilize the Jacobian determinant of deformation fields from the image registration. This study compares both proton methods using respiratory-resolved images acquired using fermat-looped orthogonally encoded trajectories (FLORET) acquisition.

Methods: Free-breathing FLORET data were acquired from participants with various pulmonary conditions (N = 29) and healthy controls (N = 7), and reconstructed into respiratory phase-resolved images. Signal-based regional ventilation (RVent) was quantified using the 3D phase-resolved functional lung algorithm, and volume-based Jacobian ventilation (JVent) was derived as the Jacobian of the deformation field from the direct image registration of the end-expiratory image to the end-inspiratory image. Differences between the means, coefficients of variation (CoVs), and their ventilation defect percent (VDP) were quantified by Bland-Altman plots. The spatial overlap of the defect maps was determined by multi-class Sørensen-Dice coefficient, and Spearman correlations to 129Xe MRI were assessed.

Results: In all study participants, statistically significant differences were found between means/CoVs of RVent and JVent parameters (both p < 0.0001), but not VDP (p = 0.38). The median spatial overlap of the defect maps was 86%. VDPRVent showed stronger correlation (ρ = 0.78, Meng Z = 4.36, p < 0.0001) to VDP129Xe than JVent (ρ = 0.34).

Conclusion: Although both proton lung MRI methods successfully identified ventilation defects, the stronger correlation between signal-based and 129Xe MRI indicates that RVent may provide a more reliable assessment of lung ventilation in clinical applications in comparison to volume-based parameters.

目的:三维自由呼吸、质子、无造影剂的MR方法越来越多地用于肺通气加权测量。这些方法分为:(1)基于信号的方法,依赖于呼吸过程中肺实质信号的变化;(2)基于体积的方法,利用图像配准的变形场的雅可比行列式。本研究比较了两种质子方法,使用使用费马环正交编码轨迹(FLORET)获取的呼吸分辨图像。方法:获取不同肺部疾病(29例)和健康对照(7例)的自由呼吸FLORET数据,并将其重建为呼吸相位分辨图像。采用三维相位分辨功能肺算法量化基于信号的区域通气(RVent),导出基于体积的雅可比通气(JVent)作为呼气末图像直接配准到吸气末图像变形场的雅可比矩阵。均数、变异系数(CoVs)及其通风缺陷率(VDP)之间的差异通过Bland-Altman图进行量化。通过多类Sørensen-Dice系数确定缺陷图的空间重叠,并评估与129Xe MRI的Spearman相关性。结果:在所有研究对象中,RVent和JVent参数的均值/CoVs之间存在统计学差异(p RVent的相关性均强于JVent (ρ = 0.78,孟Z = 4.36, p 129Xe) (ρ = 0.34)。结论:尽管两种质子肺MRI方法都能成功识别通气缺陷,但基于信号和129Xe MRI之间更强的相关性表明,与基于体积的参数相比,RVent可能在临床应用中提供更可靠的肺通气评估。
{"title":"Comparison of Signal- and Volume-Based Ventilation-Weighted Assessment Using 3D FLORET UTE MRI in Patients With Various Pulmonary Disease.","authors":"Filip Klimeš, Joseph W Plummer, Andreas Voskrebenzev, Marcel Gutberlet, Marius M Klein, Matthew M Willmering, Alexander M Matheson, Abdullah S Bdaiwi, Frank Wacker, Jason C Woods, Zackary I Cleveland, Laura L Walkup, Jens Vogel-Claussen","doi":"10.1002/mrm.70239","DOIUrl":"https://doi.org/10.1002/mrm.70239","url":null,"abstract":"<p><strong>Purpose: </strong>3D free-breathing, proton, contrast-agent-free MR methods are increasingly used for pulmonary ventilation-weighted measurements. The methods are split between: (1) signal-based, which rely on lung parenchyma signal changes during respiration, and (2) volume-based that utilize the Jacobian determinant of deformation fields from the image registration. This study compares both proton methods using respiratory-resolved images acquired using fermat-looped orthogonally encoded trajectories (FLORET) acquisition.</p><p><strong>Methods: </strong>Free-breathing FLORET data were acquired from participants with various pulmonary conditions (N = 29) and healthy controls (N = 7), and reconstructed into respiratory phase-resolved images. Signal-based regional ventilation (RVent) was quantified using the 3D phase-resolved functional lung algorithm, and volume-based Jacobian ventilation (JVent) was derived as the Jacobian of the deformation field from the direct image registration of the end-expiratory image to the end-inspiratory image. Differences between the means, coefficients of variation (CoVs), and their ventilation defect percent (VDP) were quantified by Bland-Altman plots. The spatial overlap of the defect maps was determined by multi-class Sørensen-Dice coefficient, and Spearman correlations to <sup>129</sup>Xe MRI were assessed.</p><p><strong>Results: </strong>In all study participants, statistically significant differences were found between means/CoVs of RVent and JVent parameters (both p < 0.0001), but not VDP (p = 0.38). The median spatial overlap of the defect maps was 86%. VDP<sub>RVent</sub> showed stronger correlation (ρ = 0.78, Meng Z = 4.36, p < 0.0001) to VDP<sub>129Xe</sub> than JVent (ρ = 0.34).</p><p><strong>Conclusion: </strong>Although both proton lung MRI methods successfully identified ventilation defects, the stronger correlation between signal-based and <sup>129</sup>Xe MRI indicates that RVent may provide a more reliable assessment of lung ventilation in clinical applications in comparison to volume-based parameters.</p>","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146113575","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
引用次数: 0
Toward Super-Resolution Reconstruction of Diffusion-Relaxation MRI Using Slice Excitation With Random Overlap (SERO). 基于随机重叠层激励(SERO)的扩散弛豫MRI超分辨率重建。
IF 3 3区 医学 Q2 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING Pub Date : 2026-02-01 DOI: 10.1002/mrm.70282
Felix Mortensen, Jakub Jurek, Jens Sjölund, Geraline Vis, Ronnie Wirestam, Malwina Molendowska, Andrzej Materka, Filip Szczepankiewicz
<p><strong>Purpose: </strong>Diffusion MRI probes tissue microstructure, but low SNR and limited resolution hinder detection of features and parameter estimates. We introduce slice excitation with random overlap (SERO), which enables variable repetition times (TRs) and diffusion weighting within a single shot. This acquisition supports super-resolution reconstruction of baseline signal ( <math> <semantics> <mrow><msub><mi>S</mi> <mn>0</mn></msub> </mrow> <annotation>$$ {S}_0 $$</annotation></semantics> </math> ), diffusivity ( <math> <semantics><mrow><mi>D</mi></mrow> <annotation>$$ D $$</annotation></semantics> </math> ), diffusional variance ( <math> <semantics><mrow><mi>V</mi></mrow> <annotation>$$ V $$</annotation></semantics> </math> ), and longitudinal relaxation ( <math> <semantics> <mrow><msub><mi>T</mi> <mn>1</mn></msub> </mrow> <annotation>$$ {T}_1 $$</annotation></semantics> </math> ) maps.</p><p><strong>Methods: </strong>We implemented a diffusion-weighted spin-echo sequence in Pulseq that excites thick slices at random positions. Across shots, pseudo-random overlap produces inter- and intra-slice TR variation (0.15-21.9 s) with b-values up to 1.4 ms/μm<sup>2</sup>. The <math> <semantics> <mrow><msub><mi>T</mi> <mn>1</mn></msub> </mrow> <annotation>$$ {T}_1 $$</annotation></semantics> </math> -weighting enables through-slice super-resolution and allows <math> <semantics> <mrow><msub><mi>T</mi> <mn>1</mn></msub> </mrow> <annotation>$$ {T}_1 $$</annotation></semantics> </math> estimation. Accuracy and precision were evaluated in numerical phantoms across variable SNR. SERO was compared with slice-shifting super-resolution and conventional high-resolution imaging. Feasibility was demonstrated in healthy brain in vivo at 1.5-mm isotropic resolution in 2:30 min.</p><p><strong>Results: </strong>In simulations SERO improved accuracy of <math> <semantics><mrow><mi>D</mi></mrow> <annotation>$$ D $$</annotation></semantics> </math> , <math> <semantics><mrow><mi>V</mi></mrow> <annotation>$$ V $$</annotation></semantics> </math> , and <math> <semantics> <mrow><msub><mi>T</mi> <mn>1</mn></msub> </mrow> <annotation>$$ {T}_1 $$</annotation></semantics> </math> while maintaining voxel-wise precision comparable to direct sampling across SNRs. Regularized SERO achieved RMSE ≈ 0.5 μm<sup>2</sup>/ms ( <math> <semantics><mrow><mi>D</mi></mrow> <annotation>$$ D $$</annotation></semantics> </math> ) and ≈ 0.5 μm<sup>4</sup>/ms<sup>2</sup> ( <math> <semantics><mrow><mi>V</mi></mrow> <annotation>$$ V $$</annotation></semantics> </math> ) at SNR = 3, whereas direct sampling required SNR ≥ 7-10; root-mean-variance decreased by > 50% versus an unregularized fit. In vivo, SERO yielded sharp tissue boundaries and smooth parameter maps.</p><p><strong>Conclusion: </strong>Random slice overlap enriches encoding diversity, improving accuracy and precision of diffusion and relaxation parameters without longer scan time. SERO offers a novel path to high-resolution micro
目的:扩散MRI探测组织微观结构,但低信噪比和有限的分辨率阻碍了特征的检测和参数估计。我们引入了随机重叠的片激励(SERO),它可以在单次射击中实现可变重复时间(TRs)和扩散加权。该采集支持基线信号(S 0 $$ {S}_0 $$)、扩散系数(D $$ D $$)、扩散方差(V $$ V $$)和纵向松弛(t1 $$ {T}_1 $$)图的超分辨率重建。方法:我们在脉冲序列中实现了一个扩散加权自旋回波序列,在随机位置激发厚切片。在不同的镜头间,伪随机重叠产生片间和片内的TR变化(0.15-21.9 s), b值高达1.4 ms/μm2。t1 $$ {T}_1 $$ -加权可实现透片超分辨率,并允许t1 $$ {T}_1 $$估计。准确度和精度在不同信噪比的数值模型中进行评估。比较了移片超分辨率成像和常规高分辨率成像。可行性在健康脑内以1.5 mm各向同性分辨率在体内2:30 min得到证实。结果:在模拟中,SERO提高了D $$ D $$、V $$ V $$和t1 $$ {T}_1 $$的精度,同时保持了与跨信噪比直接采样相当的体素精度。在信噪比为3时,正则化SERO的RMSE≈0.5 μm2/ms (D $$ D $$)和≈0.5 μm4/ms2 (V $$ V $$),而直接采样要求信噪比≥7-10;均方根方差减小了50倍% versus an unregularized fit. In vivo, SERO yielded sharp tissue boundaries and smooth parameter maps.Conclusion: Random slice overlap enriches encoding diversity, improving accuracy and precision of diffusion and relaxation parameters without longer scan time. SERO offers a novel path to high-resolution microstructural imaging, especially at low SNR.
{"title":"Toward Super-Resolution Reconstruction of Diffusion-Relaxation MRI Using Slice Excitation With Random Overlap (SERO).","authors":"Felix Mortensen, Jakub Jurek, Jens Sjölund, Geraline Vis, Ronnie Wirestam, Malwina Molendowska, Andrzej Materka, Filip Szczepankiewicz","doi":"10.1002/mrm.70282","DOIUrl":"https://doi.org/10.1002/mrm.70282","url":null,"abstract":"&lt;p&gt;&lt;strong&gt;Purpose: &lt;/strong&gt;Diffusion MRI probes tissue microstructure, but low SNR and limited resolution hinder detection of features and parameter estimates. We introduce slice excitation with random overlap (SERO), which enables variable repetition times (TRs) and diffusion weighting within a single shot. This acquisition supports super-resolution reconstruction of baseline signal ( &lt;math&gt; &lt;semantics&gt; &lt;mrow&gt;&lt;msub&gt;&lt;mi&gt;S&lt;/mi&gt; &lt;mn&gt;0&lt;/mn&gt;&lt;/msub&gt; &lt;/mrow&gt; &lt;annotation&gt;$$ {S}_0 $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; ), diffusivity ( &lt;math&gt; &lt;semantics&gt;&lt;mrow&gt;&lt;mi&gt;D&lt;/mi&gt;&lt;/mrow&gt; &lt;annotation&gt;$$ D $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; ), diffusional variance ( &lt;math&gt; &lt;semantics&gt;&lt;mrow&gt;&lt;mi&gt;V&lt;/mi&gt;&lt;/mrow&gt; &lt;annotation&gt;$$ V $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; ), and longitudinal relaxation ( &lt;math&gt; &lt;semantics&gt; &lt;mrow&gt;&lt;msub&gt;&lt;mi&gt;T&lt;/mi&gt; &lt;mn&gt;1&lt;/mn&gt;&lt;/msub&gt; &lt;/mrow&gt; &lt;annotation&gt;$$ {T}_1 $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; ) maps.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Methods: &lt;/strong&gt;We implemented a diffusion-weighted spin-echo sequence in Pulseq that excites thick slices at random positions. Across shots, pseudo-random overlap produces inter- and intra-slice TR variation (0.15-21.9 s) with b-values up to 1.4 ms/μm&lt;sup&gt;2&lt;/sup&gt;. The &lt;math&gt; &lt;semantics&gt; &lt;mrow&gt;&lt;msub&gt;&lt;mi&gt;T&lt;/mi&gt; &lt;mn&gt;1&lt;/mn&gt;&lt;/msub&gt; &lt;/mrow&gt; &lt;annotation&gt;$$ {T}_1 $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; -weighting enables through-slice super-resolution and allows &lt;math&gt; &lt;semantics&gt; &lt;mrow&gt;&lt;msub&gt;&lt;mi&gt;T&lt;/mi&gt; &lt;mn&gt;1&lt;/mn&gt;&lt;/msub&gt; &lt;/mrow&gt; &lt;annotation&gt;$$ {T}_1 $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; estimation. Accuracy and precision were evaluated in numerical phantoms across variable SNR. SERO was compared with slice-shifting super-resolution and conventional high-resolution imaging. Feasibility was demonstrated in healthy brain in vivo at 1.5-mm isotropic resolution in 2:30 min.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Results: &lt;/strong&gt;In simulations SERO improved accuracy of &lt;math&gt; &lt;semantics&gt;&lt;mrow&gt;&lt;mi&gt;D&lt;/mi&gt;&lt;/mrow&gt; &lt;annotation&gt;$$ D $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; , &lt;math&gt; &lt;semantics&gt;&lt;mrow&gt;&lt;mi&gt;V&lt;/mi&gt;&lt;/mrow&gt; &lt;annotation&gt;$$ V $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; , and &lt;math&gt; &lt;semantics&gt; &lt;mrow&gt;&lt;msub&gt;&lt;mi&gt;T&lt;/mi&gt; &lt;mn&gt;1&lt;/mn&gt;&lt;/msub&gt; &lt;/mrow&gt; &lt;annotation&gt;$$ {T}_1 $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; while maintaining voxel-wise precision comparable to direct sampling across SNRs. Regularized SERO achieved RMSE ≈ 0.5 μm&lt;sup&gt;2&lt;/sup&gt;/ms ( &lt;math&gt; &lt;semantics&gt;&lt;mrow&gt;&lt;mi&gt;D&lt;/mi&gt;&lt;/mrow&gt; &lt;annotation&gt;$$ D $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; ) and ≈ 0.5 μm&lt;sup&gt;4&lt;/sup&gt;/ms&lt;sup&gt;2&lt;/sup&gt; ( &lt;math&gt; &lt;semantics&gt;&lt;mrow&gt;&lt;mi&gt;V&lt;/mi&gt;&lt;/mrow&gt; &lt;annotation&gt;$$ V $$&lt;/annotation&gt;&lt;/semantics&gt; &lt;/math&gt; ) at SNR = 3, whereas direct sampling required SNR ≥ 7-10; root-mean-variance decreased by &gt; 50% versus an unregularized fit. In vivo, SERO yielded sharp tissue boundaries and smooth parameter maps.&lt;/p&gt;&lt;p&gt;&lt;strong&gt;Conclusion: &lt;/strong&gt;Random slice overlap enriches encoding diversity, improving accuracy and precision of diffusion and relaxation parameters without longer scan time. SERO offers a novel path to high-resolution micro","PeriodicalId":18065,"journal":{"name":"Magnetic Resonance in Medicine","volume":" ","pages":""},"PeriodicalIF":3.0,"publicationDate":"2026-02-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"146100334","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
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Magnetic Resonance in Medicine
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