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A Versatile Molecular Dynamics Force Field for Modelling Polyhydroxyalkanoate Structure and Barrier Properties 用于模拟聚羟基烷酸酯结构和势垒性质的通用分子动力学力场
IF 1.6 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-07-16 DOI: 10.1002/mats.202500048
Nisha Middleton, Dominic Wadkin-Snaith, Paul Mulheran, Karen Johnston

Polyhydroxybutyrate (PHB) is a sustainable and compostable polyester, which has great potential for use as food packaging film, having similar barrier properties to conventional plastics. PHB is semi-crystalline and is often copolymerised with polyhydroxyvalerate (PHV) to form poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV). Molecular dynamics (MD) simulations provide valuable insight into the polymer structure and gas diffusion, but the accuracy of MD simulations depends on the force field. This work presents a modified all-atom General Amber Force Field that enables PHB, PHV and PHVB copolymers to be modelled. The structural properties of crystal and amorphous phases of PHB and PHV were in good agreement with experiment. The diffusion coefficients of water and oxygen in amorphous PHB were also in good agreement with experimental values. The diffusion coefficient of oxygen in PHV was larger than in PHB, mainly due to the lower density of PHV. The diffusion coefficient of water in PHV was similar to PHB as its diffusion is hindered by the interaction of water with the polar ester groups on the polymer chains. This force field can be used to investigate the diffusion of water and oxygen in PHB, PHV and PHBV copolymers, and to optimise the barrier properties of PHBV-based plastic film.

聚羟基丁酸酯(PHB)是一种可持续的、可降解的聚酯,具有与传统塑料相似的阻隔性能,作为食品包装膜具有很大的应用潜力。PHB为半结晶,常与聚羟基戊酸酯(PHV)共聚形成聚(3-羟基丁酸酯-co-3-羟基戊酸酯)(PHBV)。分子动力学(MD)模拟提供了有价值的洞察聚合物结构和气体扩散,但MD模拟的准确性取决于力场。这项工作提出了一个改进的全原子通用琥珀力场,使PHB, PHV和PHVB共聚物能够建模。PHB和PHV的晶体和非晶相的结构性能与实验结果吻合较好。水和氧在非晶PHB中的扩散系数也与实验值吻合较好。氧在PHV中的扩散系数大于PHB,这主要是由于PHV的密度较低所致。水在PHV中的扩散系数与PHB相似,因为水与聚合物链上的极性酯基相互作用阻碍了水的扩散。该力场可用于研究水和氧在PHB、PHV和PHBV共聚物中的扩散,并优化PHBV基塑料薄膜的阻隔性能。
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引用次数: 0
Assessing Dynamic Viscosity of Polyethylene Glycol (PEG): Sensitivity Analysis and AI-Based Modeling 聚乙二醇(PEG)动态粘度评估:敏感性分析和基于人工智能的建模
IF 1.6 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-07-13 DOI: 10.1002/mats.202500032
Juan Li, Soud Khalil Ibrahim, Ramdevsinh Jhala, Anupam Yadav, Ramachandran T, Aman Shankhyan, Karthikeyan A, Dhirendra Nath Thatoi, Rafid Jihad Albadr, Waam Mohammed Taher, Mariem Alwan, Mahmood Jasem Jawad, Hiba Mushtaq, Samim Sherzod, Aseel Smerat

In this study, the hyperparameters of a gradient boosting decision tree (GBDT) machine learning model are meticulously fine-tuned using four distinct evolutionary optimization approaches: Evolutionary Strategies (ES), Bayesian Probability Improvement (BPI), Batch Bayesian Optimization (BBO), and Self-Adaptive Differential Evolution (SADE) to predict (polyethylene glycol) PEG viscosity. Analysis of the correlation matrix indicates that pressure and molecular weight have influence on dynamic viscosity. Pressure displays a negligible positive correlation (0.17), while molecular weight shows a positive correlation (0.24). On the other hand, temperature exhibits an inverse relationship (−0.75) with dynamic viscosity, establishing it as the most critical factor affecting viscosity. Thus, temperature significantly impacts dynamic viscosity, whereas molecular weight and pressure contribute marginally. These observations are essential for comprehending system behavior and enhancing process efficiency. Among the optimization techniques, SADE outperforms the others, yielding the most accurate GBDT-based hybrid predictive model, as evidenced by performance metrics, including R-squared, mean squared error (MSE), and average absolute relative error (AARE). Despite its extended runtime, SADE's exceptional precision, reflected in the lowest MSE and AARE. Sensitivity analysis confirms that all input variables affect the target parameter, with SHapley Additive exPlanations (SHAP) analysis highlighting temperature as a dominant factor influencing PEG viscosity.

在本研究中,使用四种不同的进化优化方法对梯度增强决策树(GBDT)机器学习模型的超参数进行了精心微调:进化策略(ES)、贝叶斯概率改进(BPI)、批处理贝叶斯优化(BBO)和自适应差分进化(SADE)来预测聚乙二醇(PEG)粘度。相关矩阵分析表明,压力和分子量对动态粘度有影响。压力的正相关(0.17)可忽略不计,而分子量的正相关(0.24)。另一方面,温度与动态粘度呈负相关(- 0.75),是影响粘度的最关键因素。因此,温度对动态粘度有显著影响,而分子量和压力的影响微乎其微。这些观察对于理解系统行为和提高过程效率是必不可少的。在优化技术中,SADE优于其他技术,产生了最准确的基于gbdt的混合预测模型,性能指标包括r平方、均方误差(MSE)和平均绝对相对误差(AARE)。尽管它的运行时间很长,但SADE的异常精度反映在最低的MSE和AARE上。敏感性分析证实,所有输入变量都会影响目标参数,SHapley加性解释(SHAP)分析强调温度是影响PEG粘度的主要因素。
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引用次数: 0
A Model to Predict the Flow Rate in Single Conical Screw Extruder 单螺杆挤出机流量预测模型
IF 1.6 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-07-10 DOI: 10.1002/mats.202500034
Haonan Wang, Ruidi Qi, Zhitao Liu, Liangzhi Xia

A novel general model for predicting the flow rate and pressure in conical screw extruders for polymer processing has been developed, addressing a crucial need in polymer manufacturing. Based on single screw extruder flow Equations and mass conservation principles, we derived a flow rate Equation for a single conical screw, accounting for variations in screw diameter and slot depth along the length. Recognizing the significant impact of slip phenomena on flow rates, especially for energetic materials, we incorporated a slip velocity correction for non-Newtonian fluids. This correction was based on simulations across various diameters and rotational speeds, enhancing the model's accuracy for real-world polymer extrusion processes. The model's predictive power was validated through experimental data, yielding impressive accuracy with simulation calculation errors of 1.59% and numerical derivation errors of 7.40%. This research bridges the gap between theoretical polymer rheology and practical extrusion processes, offering a method for optimizing the design technology of single conical screws.

提出了一种预测聚合物加工用锥形螺杆挤出机流量和压力的通用模型,解决了聚合物制造中的一个关键问题。基于单螺杆挤出机流动方程和质量守恒原理,推导了考虑螺杆直径和槽深沿长度变化的单螺杆流量方程。认识到滑移现象对流速的重大影响,特别是对含能材料,我们纳入了非牛顿流体的滑移速度校正。这种修正是基于不同直径和转速的模拟,提高了模型对真实聚合物挤出过程的准确性。通过实验数据验证了该模型的预测能力,仿真计算误差为1.59%,数值推导误差为7.40%。本研究弥合了聚合物流变学理论与实际挤出工艺之间的差距,为优化单锥螺杆的设计工艺提供了一种方法。
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引用次数: 0
A Comparison of Bead-Spring and Site-Binding Models for Weak Polyelectrolytes 弱聚电解质珠-弹簧和位点结合模型的比较
IF 1.8 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-28 DOI: 10.1002/mats.202500020
Loris Burth, David Beyer, Christian Holm

Understanding the ionization behavior of weak polyelectrolytes in aqueous solutions with added salt is crucial for designing advanced materials. Predicting the ionization states of weak polyelectrolyte is challenging due to the interplay between long-range Coulomb interactions, conformational flexibility, and chemical equilibria. Bead-spring models with explicit ion treatment provide accurate results but are computationally expensive. In contrast, Ising-like site-binding models are computationally efficient but neglect conformational flexibility and use an implicit salt description. To assess the validity of these approximations, a site-binding model is compared with bead-spring models that include implicit and explicit ion treatments. These results show that under strong electrostatic coupling, explicit ion treatment is critical for accurately modeling ionization behavior. Both the site-binding and implicit bead-spring models overestimate monomer correlations in this regime, leading to significant deviations from the explicit bead-spring model. Under weak coupling, typical of aqueous environments with monovalent salts, all models give reasonable ionization curves, with slight differences. The implicit bead-spring model shows slightly stronger suppression of ionization, while the site-binding model aligns more closely with the explicit bead-spring model due to compensating errors in ion treatment and flexibility. In conclusion, while all models perform well under weak coupling, explicit ion treatment is essential for accurate ionization under strong coupling.

了解弱聚电解质在添加盐的水溶液中的电离行为对设计先进材料至关重要。由于远程库仑相互作用、构象柔韧性和化学平衡之间的相互作用,预测弱聚电解质的电离状态具有挑战性。珠簧模型与显式离子处理提供准确的结果,但计算昂贵。相比之下,类似ising的位点结合模型计算效率高,但忽略了构象灵活性,并使用隐式盐描述。为了评估这些近似的有效性,将位点结合模型与包括隐式和显式离子处理的珠弹簧模型进行比较。这些结果表明,在强静电耦合下,显式离子处理对于精确模拟电离行为至关重要。位点结合和隐式珠簧模型都高估了这种情况下的单体相关性,导致与显式珠簧模型的显著偏差。在弱耦合条件下(典型的含一价盐的水环境),所有模型都给出了合理的电离曲线,但差异不大。隐式珠簧模型显示出稍强的电离抑制,而位点结合模型由于补偿了离子处理和灵活性的误差而更接近显式珠簧模型。综上所述,虽然所有模型在弱耦合下都表现良好,但明确的离子处理对于强耦合下的精确电离至关重要。
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引用次数: 0
Numerical Simulation and Analysis of CO2 Bubble Deformation in PET Continuous Extrusion Process PET连续挤压过程CO2气泡变形的数值模拟与分析
IF 1.8 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-21 DOI: 10.1002/mats.202500006
Lihua Cai, Wangyongjia Zhong, Haifeng Fang, Zheng Rong, Sipeng Zhang

In this paper, the dynamic deformation of supercritical CO2 bubbles in the shear flow field of polyethylene terephthalate (PET) is analyzed, and the dynamic continuous extrusion process of PET microcellular foaming is numerically simulated. The extrusion process of PET supercritical CO2 homogeneous solution is simulated by the user defined function (UDF) program, and the volume of fluid (VOF) method is used to track the gas-liquid interface. The deformation of supercritical CO2 bubbles in the PET microcellular foaming extrusion process is simulated in FLUENT software. It is found that in the continuous dynamic extrusion process, the bubble moves with the polymer at a certain angle, and there will be an area at the two ends to inhibit the shear thinning of the melt, which affects the movement pattern of the bubble. The increase in shear rate is the main factor causing the increase in the aspect ratio of the bubble. The increase of the rheological index can promote the bubble to maintain the spherical shape by affecting the shear flow field around the bubble. In addition, it is found that the effect of surface tension on bubble morphology in the shear flow field is not as large as that in the static flow field.

本文分析了超临界CO2气泡在聚对苯二甲酸乙二醇酯(PET)剪切流场中的动态变形,并对PET微孔发泡的动态连续挤出过程进行了数值模拟。采用用户自定义函数(UDF)程序模拟PET超临界CO2均相溶液的挤压过程,采用流体体积法(VOF)跟踪气液界面。利用FLUENT软件对PET微孔发泡挤压过程中超临界CO2气泡的变形进行了模拟。研究发现,在连续动态挤压过程中,气泡随聚合物以一定角度运动,在两端会有一个区域抑制熔体的剪切变薄,从而影响气泡的运动模式。剪切速率的增大是导致气泡长径比增大的主要因素。流变指数的增加可以通过影响气泡周围的剪切流场来促进气泡保持球形。此外,还发现在剪切流场中,表面张力对气泡形态的影响没有在静态流场中那么大。
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引用次数: 0
Issue Information: Macromol. Theory Simul. 3/2025 发布信息:Macromol。理论模拟3/2025
IF 1.8 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-19 DOI: 10.1002/mats.202570006
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引用次数: 0
Computational Modeling of the Continuous Separation of a Molten Polymer Mixture in a Centrifugal Field 熔融聚合物混合物在离心场中连续分离的计算模型
IF 1.8 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-19 DOI: 10.1002/mats.202570005
V. Medvid, H. Steiner, C. Irrenfried, M. Feuchter, G. Brenn

A centrifugal technique for separating molten polymer blends is investigated. In a rotating cylinder, the components of mixtures of LDPE (Low-Density Poly(Ethylene)) and PET (Poly(Ethylene) Terephthalate) are separated, which is enabled by the different component densities. The separation quality depends on material and operational parameters. More details can be found in article 2400109 by Günter Brenn and co-workers.

研究了一种分离熔融聚合物共混物的离心技术。在旋转圆柱体中,LDPE(低密度聚乙烯)和PET(聚(乙烯)对苯二甲酸酯)混合物的组分被分离,这是由不同的组分密度实现的。分离质量取决于物料和操作参数。更多细节可以在g nter Brenn及其同事的文章2400109中找到。
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引用次数: 0
Optimizing Solvent Systems for Effective Lutein Solvation: A Molecular Dynamics Approach Using 2-Methyl Tetrahydrofuran, Deep Eutectic Solvent, Microemulsion, and Hexane 优化叶黄素有效溶剂体系:使用2-甲基四氢呋喃、深共晶溶剂、微乳液和己烷的分子动力学方法
IF 1.6 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-14 DOI: 10.1002/mats.202500016
Ayush S. Gulhane, Rontu Das, Navnath T. Hatvate, Debashis Kundu

The critical importance of solvent selection in lutein solvation lies in its significant commercial value and health benefits. This study employs molecular dynamics (MD) simulations to elucidate the atomic-level interactions of lutein with 2-methyl tetrahydrofuran (2-MeTHF), a microemulsion system (Tween 80: n-propanol: isoamyl acetate: water), a deep eutectic solvent (DES) (choline chloride: glucose, 1:3 molar ratio), and hexane. This study addresses the gap in atomic-scale understanding of lutein-solvent interactions by providing a comparative analysis. MD simulations offer comprehensive insights into structural properties, such as radial distribution functions (RDF), hydrogen bonding (H-bonding) dynamics, and transport properties like mean square displacement (MSD) within these solvent systems. The analysis reveals that DES exhibits the highest suitability for lutein solvation among the solvents studied, suggesting its potential to enhance extraction efficiency while significantly reducing environmental impact, which is validated by experimental literature. These findings contribute to developing more efficient, sustainable, and environmentally friendly extraction techniques for lutein and similar bioactive compounds, potentially benefiting the extraction of other xanthophylls and structurally related molecules.

叶黄素溶剂化中溶剂选择的关键在于其显著的商业价值和健康效益。本研究采用分子动力学(MD)模拟来阐明叶黄素与2-甲基四氢呋喃(2-MeTHF)、微乳液体系(吐温80:正丙醇:乙酸异戊酯:水)、深共晶溶剂(DES)(氯化胆碱:葡萄糖,摩尔比1:3)和己烷的原子水平相互作用。本研究通过提供比较分析,解决了叶黄素-溶剂相互作用在原子尺度上理解的差距。MD模拟提供了对结构性质的全面了解,如径向分布函数(RDF)、氢键(h键)动力学,以及这些溶剂系统内的均方位移(MSD)等输运性质。分析结果表明,DES对叶黄素溶剂化的适宜性最高,在提高提取效率的同时显著降低对环境的影响,实验文献也证实了这一点。这些发现有助于开发更高效、可持续和环保的叶黄素和类似生物活性化合物的提取技术,并可能有益于其他叶黄素和结构相关分子的提取。
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引用次数: 0
Numerical Simulation of Mixing Enhancement in a Single Screw Extruder by Different Internal Baffles 不同内挡板对单螺杆挤出机混合增强的数值模拟
IF 1.8 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-12 DOI: 10.1002/mats.202500009
Huiwen Yu, Yuanyao Wang, Lingcao Tan, Jiarong Huang, Baiping Xu

The metering section of an industrial-scale single screw extruder is modeled, and two kinds of discontinuous baffles, three rows of plate baffles, and two types of plow-shaped baffles, arranged in staggered or parallel ways, are proposed to improve the distributive and dispersive mixing. Considering the narrow gap between the screw and barrel, the finite element method along with the mesh superposition technique is applied to solve fully 3D isothermal flow fields where the fluid is assumed to obey the Carreau constitutive model. The computation codes are successfully developed to achieve particle tracking using the fourth-order Runge–Kutta scheme. Distributive mixing is evaluated in terms of the evolution of tracer particles and Poincaré sections. Dispersive mixing is then examined in terms of shear rates, mixing index, distribution probability function of mixing index, and its integral function for particles tracking with time. For the same pressure drop and the same screw rotating speed, when compared to the conventional single screw, the numerical simulation results showed that the screw with staggered plow-shaped baffles achieved better distributive mixing with the output nearly unchanged while three rows of plate baffles significantly enhanced both distributive and dispersive mixing at the cost of output reduction by 13.2%.

对工业规模单螺杆挤出机的计量段进行了建模,提出了两种不连续挡板、三排板式挡板和两种犁形挡板,以交错或平行的方式布置,以改善分配和分散混合。考虑到螺杆与机筒间隙较窄,采用有限元法结合网格叠加技术求解全三维等温流场,并假设流体服从Carreau本构模型。成功开发了四阶龙格-库塔格式的粒子跟踪计算程序。根据示踪粒子和poincarcars剖面的演化来评价分布混合。然后从剪切速率、混合指数、混合指数的分布概率函数及其随时间跟踪的积分函数等方面考察了分散混合。在压降相同、螺杆转速相同的情况下,与传统的单螺杆相比,设置交错犁形挡板的螺杆在产量基本不变的情况下,获得了更好的分布混合效果,而设置三排板状挡板的螺杆在产量降低13.2%的情况下,均显著提高了分布混合和分散混合效果。
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引用次数: 0
Efficient Computation of Single-Chain Partition Functions in Field-Theoretic Simulations of Polymers With Nested Tree-Like Topologies 嵌套树状拓扑聚合物场理论模拟中单链配分函数的高效计算
IF 1.8 4区 工程技术 Q3 POLYMER SCIENCE Pub Date : 2025-05-12 DOI: 10.1002/mats.202500023
Charles Li, Kris T. Delaney, M. Scott Shell, Glenn H. Fredrickson

A general algorithm is introduced to compute single-chain partition functions in field-theoretic simulations of polymers with nested tree-like topologies, including self-consistent field theory simulations that invoke the mean-field approximation. The algorithm is an extension of a method used in a number of recent studies on the phase behavior of bottlebrush block copolymers. In those studies, the computational cost of computing single-chain partition functions is reduced by aggregating the statistical weight of degenerate side arms. By extending this method to chains with arbitrary degrees of branching, the computational cost is reduced to scale with the total length of unique segments in the chain instead of the total length/mass of the entire chain. The method is first validated on a model dendrimer system by comparing results to coarse-grained molecular dynamics simulations and also demonstrate its advantage over more conventional approaches to compute single-chain partition functions. The algorithm is subsequently used to analyze the phase behavior of a molecularly informed field-theoretic model of poly(butyl acrylate)-graft-poly(dodecyl acrylate) (pBA-graft-pDDA) copolymers in a dodecane solvent. The methodology can help advance field-theoretic investigations of branched polymers by leveraging degeneracy in the chain to reduce computational cost and avoid the need to develop architecture-specific algorithms.

介绍了一种计算具有嵌套树状拓扑的聚合物的单链配分函数的一般算法,包括调用平均场近似的自洽场论模拟。该算法是对近年来研究瓶刷嵌段共聚物相行为的一种方法的扩展。在这些研究中,计算单链配分函数的计算成本通过汇总简并侧臂的统计权值来降低。通过将该方法扩展到具有任意分支度的链,计算成本降低到与链中唯一链段的总长度成比例,而不是与整个链的总长度/质量成比例。通过将结果与粗粒度分子动力学模拟结果进行比较,该方法首先在树状分子系统模型上进行了验证,并证明了其在计算单链配分函数方面优于更传统的方法。该算法随后用于分析聚丙烯酸丁酯-接枝-聚丙烯酸十二酯(pba -接枝- pdda)共聚物在十二烷溶剂中的相行为。该方法可以通过利用链中的简并性来降低计算成本并避免开发特定架构的算法,从而有助于推进支化聚合物的现场理论研究。
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引用次数: 0
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Macromolecular Theory and Simulations
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