Pub Date : 2024-12-01Epub Date: 2024-12-20DOI: 10.1051/medsci/2024194
Vincent Colot
{"title":"[Promises and excesses of the \"epigenetic era\"].","authors":"Vincent Colot","doi":"10.1051/medsci/2024194","DOIUrl":"https://doi.org/10.1051/medsci/2024194","url":null,"abstract":"","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"881-882"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869310","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-12-20DOI: 10.1051/medsci/2024177
Clara Roidor, Karim Chebli, Maud Borensztein
The memory of cellular identity is crucial for the correct development of an individual and is maintained throughout life by the epigenome. Chromatin marks, such as DNA methylation and histone modifications, ensure the stability of gene expression programmes over time and through cell division. Loss of these marks can lead to severe pathologies, including cancer and developmental syndromes. However, reprogramming of cellular identity is also a natural phenomenon that occurs early in mammalian development, particularly in the germ line, which enables the production of mature and functional gametes. The germ line transmits genetic and epigenetic information to the next generation, contributing to the survival of the species. Primordial germ cells (PGCs) undergo extensive chromatin remodelling, including global DNA demethylation and erasure of the parental imprints. This review introduces the concept of epigenetic reprogramming, its discovery and key steps, as well as the transcriptional and chromatin changes that accompany germ cell formation in mice. Finally, we discuss the epigenetic mechanisms of genomic imprinting, its discovery, regulation and relevance to human disease.
细胞身份的记忆对个体的正确发育至关重要,并在整个生命过程中由表观基因组来维持。染色质标记(如 DNA 甲基化和组蛋白修饰)可确保基因表达程序随着时间的推移和细胞分裂而保持稳定。这些标记的缺失会导致严重的病症,包括癌症和发育综合症。然而,细胞身份的重编程也是哺乳动物发育早期的一种自然现象,尤其是在生殖系中,因为生殖系能够产生成熟的功能性配子。生殖细胞将遗传和表观遗传信息传递给下一代,为物种的生存做出贡献。原始生殖细胞(PGCs)经历了广泛的染色质重塑,包括全局 DNA 去甲基化和抹去亲代印记。本综述介绍了表观遗传重编程的概念、发现和关键步骤,以及伴随小鼠生殖细胞形成的转录和染色质变化。最后,我们将讨论基因组印记的表观遗传机制、其发现、调控以及与人类疾病的相关性。
{"title":"[Epigenetic reprogramming, germline and genomic imprinting].","authors":"Clara Roidor, Karim Chebli, Maud Borensztein","doi":"10.1051/medsci/2024177","DOIUrl":"https://doi.org/10.1051/medsci/2024177","url":null,"abstract":"<p><p>The memory of cellular identity is crucial for the correct development of an individual and is maintained throughout life by the epigenome. Chromatin marks, such as DNA methylation and histone modifications, ensure the stability of gene expression programmes over time and through cell division. Loss of these marks can lead to severe pathologies, including cancer and developmental syndromes. However, reprogramming of cellular identity is also a natural phenomenon that occurs early in mammalian development, particularly in the germ line, which enables the production of mature and functional gametes. The germ line transmits genetic and epigenetic information to the next generation, contributing to the survival of the species. Primordial germ cells (PGCs) undergo extensive chromatin remodelling, including global DNA demethylation and erasure of the parental imprints. This review introduces the concept of epigenetic reprogramming, its discovery and key steps, as well as the transcriptional and chromatin changes that accompany germ cell formation in mice. Finally, we discuss the epigenetic mechanisms of genomic imprinting, its discovery, regulation and relevance to human disease.</p>","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"892-903"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869441","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
{"title":"[Protein arginine methyltransferase PRMT2 is involved in the control of inflammation in acute myeloid leukemia].","authors":"Camille Sauter, Jean-Noël Bastie, Laurent Delva, Romain Aucagne","doi":"10.1051/medsci/2024168","DOIUrl":"https://doi.org/10.1051/medsci/2024168","url":null,"abstract":"","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"979-982"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869312","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-12-20DOI: 10.1051/medsci/2024182
Hedvika Martin, Michel Wassef
Cellular differentiation and homeostasis rely on complex mechanisms to control gene expression, enabling the different cell lineages of an organism to establish and then "memorize" different epigenetic states. The processes that control gene expression are centered on chromatin, a complex of DNA, histone proteins and RNA, whose structure is finely regulated. Targeted epigenomic engineering tools make it possible to interfere with and study these processes, revealing the logic of epigenetic memory mechanisms. This article reviews the main classes of targeted epigenome modification tools and illustrates how they can be used to better understand and modify the epigenome of cells, paving the way for potentially revolutionary therapeutic prospects.
{"title":"[Targeted epigenome engineering].","authors":"Hedvika Martin, Michel Wassef","doi":"10.1051/medsci/2024182","DOIUrl":"https://doi.org/10.1051/medsci/2024182","url":null,"abstract":"<p><p>Cellular differentiation and homeostasis rely on complex mechanisms to control gene expression, enabling the different cell lineages of an organism to establish and then \"memorize\" different epigenetic states. The processes that control gene expression are centered on chromatin, a complex of DNA, histone proteins and RNA, whose structure is finely regulated. Targeted epigenomic engineering tools make it possible to interfere with and study these processes, revealing the logic of epigenetic memory mechanisms. This article reviews the main classes of targeted epigenome modification tools and illustrates how they can be used to better understand and modify the epigenome of cells, paving the way for potentially revolutionary therapeutic prospects.</p>","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"955-962"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869319","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-12-20DOI: 10.1051/medsci/2024180
Marine Gorse, Charline Bianchi, Charlotte Proudhon
Alterations in DNA methylation profiles are typically found in cancer cells, combining genome-wide hypomethylation with hypermethylation of specific regions, such as CpG islands, which are normally unmethylated. Driving effects in cancer development have been associated with alteration of DNA methylation in certain regions, inducing, for example, the repression of tumor suppressor genes or the activation of oncogenes and retrotransposons. These alterations represent prime candidates for the development of specific markers for the detection, diagnosis and prognosis of cancer. In particular, these markers, distributed along the genome, provide a wealth of information that offers potential for innovation in the field of liquid biopsy, in particular thanks to the emergence of artificial intelligence for diagnostic purposes. This could overcome the limitations related to sensitivities and specificities, which remain too low for the most difficult applications in oncology: the detection of cancers at an early stage, the monitoring of residual disease and the analysis of brain tumors. In addition, targeting the enzymatic processes that control the epigenome offers new therapeutic strategies that could reverse the regulatory anomalies of these altered epigenomes.
DNA 甲基化图谱的改变通常出现在癌细胞中,包括全基因组的低甲基化和特定区域的高甲基化,如 CpG 岛,这些区域通常是未甲基化的。癌症发展的驱动效应与某些区域 DNA 甲基化的改变有关,例如,这些改变会导致肿瘤抑制基因的抑制或致癌基因和逆转录转座子的激活。这些改变是开发用于癌症检测、诊断和预后的特异性标记物的主要候选对象。特别是由于用于诊断目的的人工智能的出现,这些分布在基因组中的标记物提供了丰富的信息,为液体活检领域的创新提供了潜力。这可以克服灵敏度和特异性方面的限制,因为灵敏度和特异性对于肿瘤学中最困难的应用来说仍然太低:早期癌症检测、残留疾病监测和脑肿瘤分析。此外,针对控制表观基因组的酶过程提供了新的治疗策略,可以逆转这些改变了的表观基因组的调控异常。
{"title":"[Epigenetics and cancer: the role of DNA methylation].","authors":"Marine Gorse, Charline Bianchi, Charlotte Proudhon","doi":"10.1051/medsci/2024180","DOIUrl":"https://doi.org/10.1051/medsci/2024180","url":null,"abstract":"<p><p>Alterations in DNA methylation profiles are typically found in cancer cells, combining genome-wide hypomethylation with hypermethylation of specific regions, such as CpG islands, which are normally unmethylated. Driving effects in cancer development have been associated with alteration of DNA methylation in certain regions, inducing, for example, the repression of tumor suppressor genes or the activation of oncogenes and retrotransposons. These alterations represent prime candidates for the development of specific markers for the detection, diagnosis and prognosis of cancer. In particular, these markers, distributed along the genome, provide a wealth of information that offers potential for innovation in the field of liquid biopsy, in particular thanks to the emergence of artificial intelligence for diagnostic purposes. This could overcome the limitations related to sensitivities and specificities, which remain too low for the most difficult applications in oncology: the detection of cancers at an early stage, the monitoring of residual disease and the analysis of brain tumors. In addition, targeting the enzymatic processes that control the epigenome offers new therapeutic strategies that could reverse the regulatory anomalies of these altered epigenomes.</p>","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"925-934"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869444","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-12-20DOI: 10.1051/medsci/2024176
Constance Kleijwegt, Jérôme Déjardin
{"title":"[Heterochromatin and epigenetic control of repeat sequences].","authors":"Constance Kleijwegt, Jérôme Déjardin","doi":"10.1051/medsci/2024176","DOIUrl":"https://doi.org/10.1051/medsci/2024176","url":null,"abstract":"","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"904-913"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869557","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}
Pub Date : 2024-12-01Epub Date: 2024-12-20DOI: 10.1051/medsci/2024179
Julie Chaumeil, Céline Morey
What if the presence of two X chromosomes confers functional specificities on female cells and contributes to the different susceptibilites of men and women to certain diseases? One of the X chromosomes is randomly silenced in each female cell from the embryonic stage, theoretically making the sexes equal. This silencing of the X chromosome is a unique epigenetic process, affecting an entire chromosome and resulting in mosaic expression of X-linked genes throughout the body. However, some genes escape this process and X-inactivation appears to be somewhat labile in certain cell types. What are the physiological implications of these observations? This question is beginning to be explored, particularly in the immune and nervous systems, where several pathologies have sexual bias.
如果两条 X 染色体的存在使女性细胞具有功能特异性,并导致男女对某些疾病具有不同的易感性呢?从胚胎阶段开始,每一个雌性细胞中的一条 X 染色体就会被随机沉默,这在理论上使得两性平等。X 染色体的沉默是一个独特的表观遗传过程,它影响到整个染色体,导致 X 连锁基因在全身呈马赛克式表达。然而,有些基因逃脱了这一过程,X-失活在某些细胞类型中似乎有些不稳定。这些观察结果的生理意义是什么?人们正在开始探索这个问题,特别是在免疫系统和神经系统中,因为在这两个系统中,有几种病理现象具有性别偏见。
{"title":"[X chromosome regulation and female functional specificities: Are two Xs better than one?]","authors":"Julie Chaumeil, Céline Morey","doi":"10.1051/medsci/2024179","DOIUrl":"https://doi.org/10.1051/medsci/2024179","url":null,"abstract":"<p><p>What if the presence of two X chromosomes confers functional specificities on female cells and contributes to the different susceptibilites of men and women to certain diseases? One of the X chromosomes is randomly silenced in each female cell from the embryonic stage, theoretically making the sexes equal. This silencing of the X chromosome is a unique epigenetic process, affecting an entire chromosome and resulting in mosaic expression of X-linked genes throughout the body. However, some genes escape this process and X-inactivation appears to be somewhat labile in certain cell types. What are the physiological implications of these observations? This question is beginning to be explored, particularly in the immune and nervous systems, where several pathologies have sexual bias.</p>","PeriodicalId":18205,"journal":{"name":"M S-medecine Sciences","volume":"40 12","pages":"935-946"},"PeriodicalIF":0.6,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":null,"resultStr":null,"platform":"Semanticscholar","paperid":"142869330","PeriodicalName":null,"FirstCategoryId":null,"ListUrlMain":null,"RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":"","EPubDate":null,"PubModel":null,"JCR":null,"JCRName":null,"Score":null,"Total":0}